mRNA_M-pyrifera_M_contig74336.17608.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig74336.17608.1 vs. uniprot
Match: A0A329RPX3_9STRA (RPAP3_C domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RPX3_9STRA) HSP 1 Score: 120 bits (302), Expect = 2.730e-28 Identity = 84/214 (39.25%), Postives = 116/214 (54.21%), Query Frame = 1 Query: 4 HTYTH-YDKWDKFDVDAAIAEVDEP-----KLTPASVVGVGEESGSGDAGGGGESGVRKVETRGKVTLRSGVGENEVQARDEIEKDLGNAAYQRGDFSVAIKHYTRALGMRPDFVAAMSNRALAFLKLRDYARAAEDADDALKMKGCNVVKVLLRRGVARRGLGRLRDAATDFTAVLSIDSSNKEARVELRKTIDQRRAAAKRAPR---FSVAV 618 HTY Y +WDKFDVDAA+ E DE K AS + SGS +V T K + S ++R+E+EK+ GNA Y+RGD+ AIK YTR LG P +SNRA+A+LK R++A A +D ALK +V K RRG AR LG+ R A DF ++D +++ + +L+ T + R A KR+P+ FS+ V Sbjct: 109 HTYDKGYKRWDKFDVDAALKEADEEAGIRQKSEQASASASEQSSGSAPL---------RVATTSKASTSS-----TTKSREELEKEEGNAHYKRGDYVAAIKSYTRCLGYNPQNAVVLSNRAMAYLKNREFANAEDDCTLALKADPTHV-KSYSRRGTARNSLGKHRLALLDFQHAATLDPKSRQIQTQLQSTRELIRTAIKRSPKRTEFSIEV 307
BLAST of mRNA_M-pyrifera_M_contig74336.17608.1 vs. uniprot
Match: A0A081B1U1_PHYPR (Uncharacterized protein n=1 Tax=Phytophthora parasitica P1976 TaxID=1317066 RepID=A0A081B1U1_PHYPR) HSP 1 Score: 118 bits (296), Expect = 4.270e-28 Identity = 83/212 (39.15%), Postives = 116/212 (54.72%), Query Frame = 1 Query: 1 AHTYTH-YDKWDKFDVDAAIAEVDEPKLTPASVVGVGEESGSGDAGGGGESGVRKVETRGKVTLRSGV--GENEVQARDEIEKDLGNAAYQRGDFSVAIKHYTRALGMRPDFVAAMSNRALAFLKLRDYARAAEDADDALKMKGCNVVKVLLRRGVARRGLGRLRDAATDFTAVLSIDSSNKEARVELRKTIDQRRAAAKRAPR---FSVAV 618 AHTY Y +W+KFDVDAA+ E DE + ++S S A G G S +VT S + + R+E+EK+ GNA Y+RGD+ AIK YTR LG P +SNRA+A+LK R++A A +D ALK +V K RRG AR LG+ R A DF +D +++ + +L+ T + R A KR+P+ FS+ V Sbjct: 87 AHTYDKGYKRWEKFDVDAALKEADEDEGNKRQNK---QQSASVQASGTGPS---------RVTATSNIPAASTTTKTREELEKEEGNAHYKRGDYVAAIKSYTRCLGYNPQNAVVLSNRAMAYLKNREFANAEDDCTLALKSDPAHV-KSYSRRGTARNALGKHRLALLDFHRAAMLDPKSRQIQTQLQSTRNVIRTAIKRSPKRTEFSIEV 285
BLAST of mRNA_M-pyrifera_M_contig74336.17608.1 vs. uniprot
Match: W2RGZ7_PHYPN (RPAP3_C domain-containing protein n=11 Tax=Phytophthora TaxID=4783 RepID=W2RGZ7_PHYPN) HSP 1 Score: 118 bits (296), Expect = 1.580e-27 Identity = 83/212 (39.15%), Postives = 116/212 (54.72%), Query Frame = 1 Query: 1 AHTYTH-YDKWDKFDVDAAIAEVDEPKLTPASVVGVGEESGSGDAGGGGESGVRKVETRGKVTLRSGV--GENEVQARDEIEKDLGNAAYQRGDFSVAIKHYTRALGMRPDFVAAMSNRALAFLKLRDYARAAEDADDALKMKGCNVVKVLLRRGVARRGLGRLRDAATDFTAVLSIDSSNKEARVELRKTIDQRRAAAKRAPR---FSVAV 618 AHTY Y +W+KFDVDAA+ E DE + ++S S A G G S +VT S + + R+E+EK+ GNA Y+RGD+ AIK YTR LG P +SNRA+A+LK R++A A +D ALK +V K RRG AR LG+ R A DF +D +++ + +L+ T + R A KR+P+ FS+ V Sbjct: 87 AHTYDKGYKRWEKFDVDAALKEADEDEGNKRQNK---QQSASVQASGTGPS---------RVTATSNIPAASTTTKTREELEKEEGNAHYKRGDYVAAIKSYTRCLGYNPQNAVVLSNRAMAYLKNREFANAEDDCTLALKSDPAHV-KSYSRRGTARNALGKHRLALLDFHRAAMLDPKSRQIQTQLQSTRNVIRTAIKRSPKRTEFSIEV 285
BLAST of mRNA_M-pyrifera_M_contig74336.17608.1 vs. uniprot
Match: A0A2R5G9G5_9STRA (Peptidyl-prolyl cis-trans isomerase FKBP4 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G9G5_9STRA) HSP 1 Score: 116 bits (291), Expect = 9.480e-27 Identity = 89/234 (38.03%), Postives = 122/234 (52.14%), Query Frame = 1 Query: 1 AHTYTH-YDKWDKFDVDAAIAEVD------------EPKLTPA----SVVGVGEESGSGDAGGGGESGVRKVETRGKVTLRSGVGEN----EVQARDEIEKDLGNAAYQRGDFSVAIKHYTRALGMRPDFVAAMSNRALAFLKLRDYARAAEDADDALKMKGCNVVKVLLRRGVARRGLGRLRDAATDFTAVLSIDSSNKEARVELRKTIDQRRAAAKRAPRFSVAVTRTEEEE 639 +HTY Y KW+ FDVD A+AEVD +PK A S G SG S + +T + R G + E + RD E++ GN Y++GDF+ A+K YTRA+G P A SNRA+A LKL+D+ A D AL++ +V K L RR AR LGR R A DF V ++ N++A EL +T + R++A+RAPR V+VTR +E Sbjct: 29 SHTYDQGYKKWESFDVDRALAEVDGQATTTGVSPDQDPKAADAPIQASFPGAKLSSGPVTPASIVPSDLSFPQTT-SASSRHGAFPDADPVEAKPRDVTERERGNDYYKKGDFAQAVKFYTRAIGFNPRSAVAYSNRAMALLKLKDFTAADADCCSALELDPTHV-KSLTRRATARNALGRHRAAFVDFALVRELEPQNRQAIAELARTRELVRSSARRAPRTRVSVTRVSSQE 260
BLAST of mRNA_M-pyrifera_M_contig74336.17608.1 vs. uniprot
Match: A0A8K1FBG6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FBG6_PYTOL) HSP 1 Score: 115 bits (289), Expect = 1.300e-26 Identity = 78/202 (38.61%), Postives = 107/202 (52.97%), Query Frame = 1 Query: 1 AHTYTH-YDKWDKFDVDAAIAEVDEPKLTPASVVGVGEESGSGDAGGGGESGVRKVETRGKVTLRSGVGENEVQARDEIEKDLGNAAYQRGDFSVAIKHYTRALGMRPDFVAAMSNRALAFLKLRDYARAAEDADDALKMKGCNVVKVLLRRGVARRGLGRLRDAATDFTAVLSIDSSNKEARVELRKTIDQRRAAAKRAPR 603 AHTY Y KWDKFDVDAA+ E D E S A E+ + T+ KV + +G ++R++IE++ GN Y+RGD+ AIK YTR LG +SNRA+A+LK R+Y +A D ALK+ +V K RRG AR LG+ R A DF +D +K+ ++ T + R A KRAP+ Sbjct: 96 AHTYDKGYKKWDKFDVDAALQEADGDHSA---------EKQSAQA----ETTTTSLPTK-KVVAKPKIGSVPTKSREDIEREEGNEHYKRGDYVAAIKSYTRCLGFNSQNAIVLSNRAMAYLKNREYKKAENDCTLALKIDSAHV-KSYSRRGTARNALGKHRLALLDFERARELDPKSKQLLTQIASTKESMRTAIKRAPK 282
BLAST of mRNA_M-pyrifera_M_contig74336.17608.1 vs. uniprot
Match: A0A6A4EVA2_9STRA (RPAP3_C domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4EVA2_9STRA) HSP 1 Score: 114 bits (285), Expect = 5.300e-26 Identity = 75/203 (36.95%), Postives = 109/203 (53.69%), Query Frame = 1 Query: 1 AHTYTH-YDKWDKFDVDAAIAEVDEPKLTPASVVGVGEESGSGDAGGGGESGVRKVETRGKVTLRSGVGEN-EVQARDEIEKDLGNAAYQRGDFSVAIKHYTRALGMRPDFVAAMSNRALAFLKLRDYARAAEDADDALKMKGCNVVKVLLRRGVARRGLGRLRDAATDFTAVLSIDSSNKEARVELRKTIDQRRAAAKRAPR 603 +HTY Y++W+KFDVDAA+ E DE T +SG + R V + ++R+E+EK+ GNA Y+RGD+ AIK YTR LG P +SNRA+A+LK R++A A +D ALK +V K RRG AR LG+ R A DF ++D +++ + +++ T + R A KRAP+ Sbjct: 90 SHTYDKGYNRWEKFDVDAALKEADEDASTKT------------------KSGAASPPLQSSPVPRRVVAASPSTKSREELEKEGGNAHYKRGDYVAAIKSYTRCLGYNPQNAVVLSNRAMAYLKNREFANAEDDCTLALKADPLHV-KSYSRRGTARNSLGKHRLALLDFQQAATLDPKSRQIQTQVQSTRELIRTAIKRAPK 273
BLAST of mRNA_M-pyrifera_M_contig74336.17608.1 vs. uniprot
Match: H3GE50_PHYRM (RPAP3_C domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GE50_PHYRM) HSP 1 Score: 114 bits (284), Expect = 7.400e-26 Identity = 79/210 (37.62%), Postives = 111/210 (52.86%), Query Frame = 1 Query: 1 AHTYTH-YDKWDKFDVDAAIAEVDEPKLTPASVVGVGEESGSGDAGGGGESGVRKVETRGKVTLRSGVGENEVQARDEIEKDLGNAAYQRGDFSVAIKHYTRALGMRPDFVAAMSNRALAFLKLRDYARAAEDADDALKMKGCNVVKVLLRRGVARRGLGRLRDAATDFTAVLSIDSSNKEARVELRKTIDQRRAAAKRAPR---FSVAV 618 AHTY Y +W+KFDVDAA+ E D S V + E+S + V R ++R+E+EK+ GNA Y+RGD+ A+K YTR LG P +SNRA+A+LK R++A A +D ALK +V K RRG AR LG+ R A DF +D +++ + +L+ T D R A KR+P+ FS+ V Sbjct: 85 AHTYDKGYKRWEKFDVDAALREAD----GGGSAVPIVEDSPASS-----------VPRRVXXXXXXXXXXXXTKSREELEKEEGNAHYKRGDYVAAVKSYTRCLGYNPQNAVVLSNRAMAYLKNREFANAEDDCTLALKANPTHV-KSFSRRGTARNSLGKHRLALLDFHRAAMLDPKSRQIQTQLQSTRDLIRTAIKRSPKRTQFSIEV 278
BLAST of mRNA_M-pyrifera_M_contig74336.17608.1 vs. uniprot
Match: D0MU02_PHYIT (RNA polymerase II-associated protein, putative n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0MU02_PHYIT) HSP 1 Score: 112 bits (280), Expect = 2.050e-25 Identity = 77/216 (35.65%), Postives = 113/216 (52.31%), Query Frame = 1 Query: 1 AHTYTH-YDKWDKFDVDAAIAEVDEP------KLTPASVVGVGEESGSGDAGGGGESGVRKVETRGKVTLRSGVGENEVQARDEIEKDLGNAAYQRGDFSVAIKHYTRALGMRPDFVAAMSNRALAFLKLRDYARAAEDADDALKMKGCNVVKVLLRRGVARRGLGRLRDAATDFTAVLSIDSSNKEARVELRKTIDQRRAAAKRAPR---FSVAV 618 AHTY Y +W+KFDVD A+ E DE P+++V + SGS ++ V ++R+E+EK+ GNA Y+RGD+ AIK YTR LG P +SNRA+A+LK R+YA A +D AL+ + K RRG AR LG+ R A DF ++D +++ + +L+ T + R A KR+ + FS+ V Sbjct: 83 AHTYDKGYKRWEKFDVDTALKEADEEGDCKQKNKQPSALV---QPSGSAPT----------------AMAKTSVSSTTTKSREELEKEEGNAHYKRGDYVAAIKSYTRCLGYNPQNAVVLSNRAMAYLKNREYANAEDDCSLALRADPAHA-KSCTRRGTARNSLGKHRLALLDFQRAATLDPKSRQIQKQLQSTRELIRTAIKRSSKRTEFSIEV 278
BLAST of mRNA_M-pyrifera_M_contig74336.17608.1 vs. uniprot
Match: K3WL17_GLOUD (RPAP3_C domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WL17_GLOUD) HSP 1 Score: 108 bits (270), Expect = 6.630e-24 Identity = 77/218 (35.32%), Postives = 109/218 (50.00%), Query Frame = 1 Query: 4 HTYTH-YDKWDKFDVDAAIAEVDEPK-----------------LTPASVVGVGEESGSGDAGGGGESGVRKVETRGKVTLRSGVGENEVQARDEIEKDLGNAAYQRGDFSVAIKHYTRALGMRPDFVAAMSNRALAFLKLRDYARAAEDADDALKMKGCNVVKVLLRRGVARRGLGRLRDAATDFTAVLSIDSSNKEARVELRKTIDQRRAAAKRAPR 603 HTY Y KW KFDVDAA+ E DE L+ +VV V + E K + + ++R+E+E++ GNA YQRGD+ AIK YTR LG P +SNRA+A LK R++ +A ED + ALK+ ++ K L RRG AR LG+ R A DF +D +++ + ++ T + R A KRAP+ Sbjct: 96 HTYDKGYSKWAKFDVDAALREADEDSTSXXXXXXXXXXXXXXXLSSKAVV------------------VEETEPAAKASATT-------KSREELEREDGNAHYQRGDYVAAIKCYTRCLGYNPHNAVVLSNRAMAHLKNREFGKAEEDCNLALKIDPSHL-KSLSRRGTARNSLGKHRLALLDFERAAELDPKSRQIQTQIASTRELIRTAIKRAPK 287
BLAST of mRNA_M-pyrifera_M_contig74336.17608.1 vs. uniprot
Match: A0A0P1AW29_PLAHL (Uncharacterized conserved protein, contains LRR repeats n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AW29_PLAHL) HSP 1 Score: 107 bits (266), Expect = 1.990e-23 Identity = 70/205 (34.15%), Postives = 110/205 (53.66%), Query Frame = 1 Query: 1 AHTYTH-YDKWDKFDVDAAIAEVDE---PKLTPASVVGVGEESGSGDAGGGGESGVRKVETRGKVTLRSGVGENEVQARDEIEKDLGNAAYQRGDFSVAIKHYTRALGMRPDFVAAMSNRALAFLKLRDYARAAEDADDALKMKGCNVVKVLLRRGVARRGLGRLRDAATDFTAVLSIDSSNKEARVELRKTIDQRRAAAKRAPR 603 AHT+ Y +W+KFDVDAA+ + D+ P+L S + + + + T ++ + R+E+E++ GN Y++GDF AIK YTR LG P V +SNRA+A+LK R+Y A +D AL+ +V K +RRG AR LG+ R A DF ++D +++ + +L+ T + R A KR+P+ Sbjct: 85 AHTHDKGYKRWEKFDVDAALKKADKEDNPQLCNESPIAT-----------------QNLSCQVAATKKTPASLTASKTREELEREDGNLHYKQGDFVAAIKSYTRCLGYNPQNVVVLSNRAMAYLKNREYTNAEDDCTLALETDLTHV-KSYMRRGTARNSLGKHRLALLDFQQAATLDPKSRQIQTQLQSTRELIRMAIKRSPK 271 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig74336.17608.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig74336.17608.1 >prot_M-pyrifera_M_contig74336.17608.1 ID=prot_M-pyrifera_M_contig74336.17608.1|Name=mRNA_M-pyrifera_M_contig74336.17608.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=213bp AHTYTHYDKWDKFDVDAAIAEVDEPKLTPASVVGVGEESGSGDAGGGGESback to top mRNA from alignment at M-pyrifera_M_contig74336:131..885- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig74336.17608.1 ID=mRNA_M-pyrifera_M_contig74336.17608.1|Name=mRNA_M-pyrifera_M_contig74336.17608.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=755bp|location=Sequence derived from alignment at M-pyrifera_M_contig74336:131..885- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig74336:131..885- >mRNA_M-pyrifera_M_contig74336.17608.1 ID=mRNA_M-pyrifera_M_contig74336.17608.1|Name=mRNA_M-pyrifera_M_contig74336.17608.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1278bp|location=Sequence derived from alignment at M-pyrifera_M_contig74336:131..885- (Macrocystis pyrifera P11B4 male)back to top |