mRNA_M-pyrifera_M_contig74282.17590.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig74282.17590.1 vs. uniprot
Match: A0A0L8I340_OCTBM (Importin N-terminal domain-containing protein (Fragment) n=2 Tax=Octopus bimaculoides TaxID=37653 RepID=A0A0L8I340_OCTBM) HSP 1 Score: 105 bits (262), Expect = 1.230e-22 Identity = 62/201 (30.85%), Postives = 110/201 (54.73%), Query Frame = 1 Query: 73 LLTKFMAMSNEELQLWENDPQELMQDQLADDYQYSVKPSAEFLWLAVIRNFPEALAKAALGMLNDLLVGGAEGESPLQQAIRKSTCYNAVTLCYSEFSSIIDFNQFFATKLLPDVQDQHGASKLIRRQVCVMLCEDWSRDLNEATYKIVYEMLVSFLK-LNDYVIAVWAAIALRNVTCSNSFSQVTFAPFMAVTIDAMIAL 672 L+ ++ +S E+LQ WE+DP+ QD+ D Y++S+KP E L+L++ +NF LA L M+ + V G G + +RK YNAV L + IDF+Q+F + L+P++Q++H ++IRR+V ++ + L+ + +YE ++ L+ D V+ + AA LR F+ F P+++ + + L Sbjct: 322 LINRYFLLSPEDLQTWESDPESFCQDEGGDSYKFSLKPCTEVLFLSLFKNFHSTLAPVLLDMVQN--VQGPCGVDDMAAILRKDAVYNAVGLASFDLFDDIDFDQWFTSHLIPELQNKHTNYRIIRRRVIWLVSQWVGVKLSVSLRATLYETILPLLQEKEDLVVRLEAANTLRTAVDDFEFNTEQFLPYLSPSFSLLFQL 520
BLAST of mRNA_M-pyrifera_M_contig74282.17590.1 vs. uniprot
Match: A0A7E6F7V6_OCTVU (importin-11 isoform X1 n=2 Tax=Octopus vulgaris TaxID=6645 RepID=A0A7E6F7V6_OCTVU) HSP 1 Score: 105 bits (262), Expect = 1.800e-22 Identity = 62/201 (30.85%), Postives = 110/201 (54.73%), Query Frame = 1 Query: 73 LLTKFMAMSNEELQLWENDPQELMQDQLADDYQYSVKPSAEFLWLAVIRNFPEALAKAALGMLNDLLVGGAEGESPLQQAIRKSTCYNAVTLCYSEFSSIIDFNQFFATKLLPDVQDQHGASKLIRRQVCVMLCEDWSRDLNEATYKIVYEMLVSFLK-LNDYVIAVWAAIALRNVTCSNSFSQVTFAPFMAVTIDAMIAL 672 L+ ++ +S E+LQ WE+DP+ QD+ D Y++S+KP E L+L++ +NF LA L M+ + V G G + +RK YNAV L + IDF+Q+F + L+P++Q++H ++IRR+V ++ + L+ + +YE ++ L+ D V+ + AA LR F+ F P+++ + + L Sbjct: 375 LINRYFLLSPEDLQTWESDPESFCQDEGGDSYKFSLKPCTEVLFLSLFKNFHSTLAPVLLDMVQN--VQGPCGVDDMAAILRKDAVYNAVGLASFDLFDDIDFDQWFTSHLIPELQNKHTNYRIIRRRVIWLVSQWVGVKLSVSLRATLYETILPLLQEKEDLVVRLEAANTLRTAVDDFEFNTEQFLPYLSPSFSLLFQL 573
BLAST of mRNA_M-pyrifera_M_contig74282.17590.1 vs. uniprot
Match: Q54WF0_DICDI (Importin N-terminal domain-containing protein n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q54WF0_DICDI) HSP 1 Score: 97.8 bits (242), Expect = 8.300e-20 Identity = 59/224 (26.34%), Postives = 120/224 (53.57%), Query Frame = 1 Query: 1 EVTRQCIRTMFEDKIEAMKELLFVLLTKFMAMSNEELQLWENDPQELMQDQLADDYQYSVKPSAEFLWLAVIRNFPEALAKAALGMLNDLLVGGAEGESPLQQAIRKSTCYNAVTLCYSEFSSIIDFNQFFATKLLPDVQDQHGASKLIRRQVCVMLCEDWSRDLNEATYKIVYEMLVSFLKLNDYVIAVWAAIALRNVTCSNSFSQVTFAPFMAVTIDAMIAL 672 ++ +Q I+ F E + ELL L++ ++ ++ EE++ WE+ P+E +Q+ +D Y +KPSA L++ ++R+F + + ML + E ++ K CY + L Y + I++F+Q F + +P++ K+I+R++ + L W + + + V ++L+ FLK +D VIA+ A AL+ +F ++ P++ T++++I L Sbjct: 374 QIAQQTIKQFFNK--ELLSELLKALVSHYLIINREEVERWEDSPEEYIQELQVNDSVYELKPSAYNLFILLMRHFHQDSVSIVVSMLEFVTSPSFNTELTSEKICLKEACYMTIGLGYHDLMDIVNFSQVFISIFVPELHSADERFKIIKRRI-LWLVSYWVGKIPDQYKESVVKLLLEFLKNSDIVIALTALDALKAYIDDFNFDHHSYQPYLKETLESVIGL 594
BLAST of mRNA_M-pyrifera_M_contig74282.17590.1 vs. uniprot
Match: A0A7S4PCD8_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4PCD8_9EUKA) HSP 1 Score: 96.3 bits (238), Expect = 2.780e-19 Identity = 65/209 (31.10%), Postives = 107/209 (51.20%), Query Frame = 1 Query: 73 LLTKFMAMSNEELQLWENDPQELMQDQLADDYQYSVKPSAEFLWLAVIRNFPEALAKAALGML---NDLLVGGAEGESP-LQQAIRKSTCYNAVTLCYSEFSSIIDFNQFFATKLLPDVQDQHGASKLIRRQVCVMLCEDW----SRDLNEATYKIVYEMLVSFLKLN-DYVIAVWAAIALRNVTCSNSFSQVTFAPFMAVTIDAMIAL 672 L++ ++ MS +L LW DP+EL+ +L D +Q +P AE L+ +++R +PE L L N+ G +G S + +R+ YNAV L E S I F+Q FA + D+ +++RR++ V++ E+W ++ E + +Y L L+ D V+ +W AIA RNV SF + F PF+ ++I L Sbjct: 356 LVSMYIIMSESDLVLWSEDPEELVHMEL-DSWQEKARPCAETLFTSLVRRWPEVCVPTVLEYLANINEYEKGEDQGSSQGMTPILRRDAIYNAVALSGFELSGHITFHQLFAQYMAADLHQNDPRYRIVRRRIAVVI-ENWFCLGGVEIKEEDLQPLYSTLAHLLRPEEDLVVRIWGAIATRNVVLEASFQKKPFLPFVPEIFRSLIQL 562
BLAST of mRNA_M-pyrifera_M_contig74282.17590.1 vs. uniprot
Match: A0A812BBH0_SEPPH (Importin-11 n=2 Tax=Sepia pharaonis TaxID=158019 RepID=A0A812BBH0_SEPPH) HSP 1 Score: 96.3 bits (238), Expect = 2.820e-19 Identity = 57/201 (28.36%), Postives = 109/201 (54.23%), Query Frame = 1 Query: 73 LLTKFMAMSNEELQLWENDPQELMQDQLADDYQYSVKPSAEFLWLAVIRNFPEALAKAALGMLNDLLVGGAEGESPLQQAIRKSTCYNAVTLCYSEFSSIIDFNQFFATKLLPDVQDQHGASKLIRRQVCVMLCEDWSRDLNEATYKIVYEMLVSFLKLN-DYVIAVWAAIALRNVTCSNSFSQVTFAPFMAVTIDAMIAL 672 L+ ++ +S+++LQ WE+DP+ QD+ D Y++S+KP E L+L++ + F L+ L M+ + V G + +RK YNAV L + IDF+Q+F + L+P++Q++H +++RR+V ++ + L+ +YE ++ L+ + D V+ + AA LR F+ F P+++ + + L Sbjct: 390 LINRYFLLSSDDLQAWESDPETFCQDEGGDSYKFSLKPCTEVLFLSLFKCFHNTLSPVLLAMVRN--VQGPCDVEDMAAILRKDAVYNAVGLASFDLFDDIDFDQWFTSHLIPELQNKHTNYRIMRRRVIWLVSQWIGVKLSVTLRPTLYEAILPLLQDDEDLVVRLEAANTLRTAVDDFEFNTEQFLPYLSPSFSLLFQL 588
BLAST of mRNA_M-pyrifera_M_contig74282.17590.1 vs. uniprot
Match: A0A286Y8U4_DANRE (Importin 11 n=14 Tax=Osteoglossocephalai TaxID=1489341 RepID=A0A286Y8U4_DANRE) HSP 1 Score: 95.9 bits (237), Expect = 3.800e-19 Identity = 58/191 (30.37%), Postives = 102/191 (53.40%), Query Frame = 1 Query: 73 LLTKFMAMSNEELQLWENDPQELMQDQLA-DDYQYSVKPSAEFLWLAVIRNFPEALAKAALGMLNDLLVGGAEGESPLQQAIRKSTCYNAVTLCYSEFSSIIDFNQFFATKLLPDVQDQHGASKLIRRQVCVMLCEDWSRDLNEATYKIVYEMLVSFLKLNDYVIAVWAAIALRNVTCSNSFSQVTFAPFM 642 L++K+ ++ EEL +WE DP+ ++ D ++YS++PS E L+L + N+ + L L M+ +L G + E P+Q + K YNAV L E +DF+Q+F +LL ++Q H KLIRR+V ++ + S ++YE+++S ++ D V+ + A L+ F F P++ Sbjct: 369 LVSKYFLLTEEELTMWEEDPESFAVEETGGDSWKYSLRPSTEVLFLDIFHNYSQTLTPVLLEMVQNLQ-GPSNVEDPVQM-LMKDAVYNAVGLAAYELFDNVDFDQWFKNQLLGELQVSHNRYKLIRRRVIWLIGQWISVKFKPELRPLLYEVILSLMQDPDLVVRIETATTLKLAVDDFEFRTEQFLPYL 557
BLAST of mRNA_M-pyrifera_M_contig74282.17590.1 vs. uniprot
Match: A0A6J8C1H1_MYTCO (Importin-11 n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8C1H1_MYTCO) HSP 1 Score: 94.4 bits (233), Expect = 1.290e-18 Identity = 57/195 (29.23%), Postives = 106/195 (54.36%), Query Frame = 1 Query: 73 LLTKFMAMSNEELQLWENDPQELMQDQLADDYQYSVKPSAEFLWLAVIRNFPEALAKAALGMLNDLLVGGAEGESPLQQAIRKSTCYNAVTLCYSEFSSIIDFNQFFATKLLPDVQDQHGASKLIRRQVCVMLCEDW-----SRDLNEATYKIVYEMLVSFLKLNDYVIAVWAAIALRNVTCSNSFSQVTFAPFM 642 L++++ +S+E+L W+ DP+E Q+++ D Y+YS+KP E L+LA+ + +L+ + M++ + + + + +RK YNAV L + I+F+ +F + LL ++Q++H ++IRR+V + LC W S++L Y+ + +L K D V+ + AA L+ FS F PF+ Sbjct: 367 LVSQYFLLSSEDLNTWDTDPEEFCQEEIGDSYRYSIKPCTETLFLALFKENRMSLSPVLIEMVHQIQL--TSDPNDIMAVLRKDAVYNAVGLSAFDLFDDINFDDWFTSHLLTELQNRHVNYRIIRRRV-IWLCGQWVGVKMSQNLRPNLYQALIPLLA---KEEDLVVRLEAAQTLKTAVDDFEFSVDQFLPFL 555
BLAST of mRNA_M-pyrifera_M_contig74282.17590.1 vs. uniprot
Match: UPI001CFA14C1 (importin-11 n=1 Tax=Protopterus annectens TaxID=7888 RepID=UPI001CFA14C1) HSP 1 Score: 93.6 bits (231), Expect = 2.380e-18 Identity = 58/194 (29.90%), Postives = 103/194 (53.09%), Query Frame = 1 Query: 73 LLTKFMAMSNEELQLWENDPQELMQDQLA-DDYQYSVKPSAEFLWLAVIRNFPEALAKAALGMLNDLLVGGAEGESPLQQA---IRKSTCYNAVTLCYSEFSSIIDFNQFFATKLLPDVQDQHGASKLIRRQVCVMLCEDWSRDLNEATYKIVYEMLVSFLKLNDYVIAVWAAIALRNVTCSNSFSQVTFAPFM 642 L++K++ ++ EEL +WE DP+ ++ D ++YS++P E L+L V F + L A L M+++L +G S ++ + + K YNAV L + +DFNQ+F +LL ++Q H KLIRR+V ++ + S ++YE +++ L+ D V+ + A L+ FS F P++ Sbjct: 369 LVSKYLLLTEEELTMWEEDPEGFAVEETGGDSWKYSLRPCTEVLFLDVFHEFSQTLTPALLDMVHNL-----QGPSVMEDSSVLLIKDAVYNAVGLAAYDLFDSVDFNQWFENQLLAELQVAHDRYKLIRRRVIWLIGQWTSVKFRSDLRPLLYEAILNLLQDQDLVVRIETATTLKLAVDDFEFSTEQFLPYL 557
BLAST of mRNA_M-pyrifera_M_contig74282.17590.1 vs. uniprot
Match: A0A8C1N8E5_CYPCA (Importin 11 n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C1N8E5_CYPCA) HSP 1 Score: 92.4 bits (228), Expect = 5.880e-18 Identity = 58/191 (30.37%), Postives = 103/191 (53.93%), Query Frame = 1 Query: 73 LLTKFMAMSNEELQLWENDPQELMQDQLA-DDYQYSVKPSAEFLWLAVIRNFPEALAKAALGMLNDLLVGGAEGESPLQQAIRKSTCYNAVTLCYSEFSSIIDFNQFFATKLLPDVQDQHGASKLIRRQVCVMLCEDWSRDLNEATYKIVYEMLVSFLKLNDYVIAVWAAIALRNVTCSNSFSQVTFAPFM 642 L++K+ ++ EEL +WE DP+ ++ D ++YS++P E L+L + N+ + L L M+ +L G + E P+Q + K YNAV L E +DF+Q+F +LL ++Q H KLIRR+V ++ + S ++YE+++S ++ D V+ + A L+ S+ Q F P++ Sbjct: 305 LVSKYFLLTEEELTMWEEDPESFAVEETGGDSWKYSLRPCTEVLFLDIFHNYSQTLTPVLLEMVQNLQ-GPSNVEDPVQM-LMKDAVYNAVGLAAYELFDNVDFDQWFKNQLLGELQISHNRYKLIRRRVIWLIGQWISVKFKPELRPLLYEVILSLMQDPDLVVRIETATTLKLDILSSETEQ--FLPYL 491
BLAST of mRNA_M-pyrifera_M_contig74282.17590.1 vs. uniprot
Match: A0A8C1T3K6_CYPCA (Importin 11 n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C1T3K6_CYPCA) HSP 1 Score: 92.4 bits (228), Expect = 5.880e-18 Identity = 58/191 (30.37%), Postives = 103/191 (53.93%), Query Frame = 1 Query: 73 LLTKFMAMSNEELQLWENDPQELMQDQLA-DDYQYSVKPSAEFLWLAVIRNFPEALAKAALGMLNDLLVGGAEGESPLQQAIRKSTCYNAVTLCYSEFSSIIDFNQFFATKLLPDVQDQHGASKLIRRQVCVMLCEDWSRDLNEATYKIVYEMLVSFLKLNDYVIAVWAAIALRNVTCSNSFSQVTFAPFM 642 L++K+ ++ EEL +WE DP+ ++ D ++YS++P E L+L + N+ + L L M+ +L G + E P+Q + K YNAV L E +DF+Q+F +LL ++Q H KLIRR+V ++ + S ++YE+++S ++ D V+ + A L+ S+ Q F P++ Sbjct: 305 LVSKYFLLTEEELTMWEEDPESFAVEETGGDSWKYSLRPCTEVLFLDIFHNYSQTLTPVLLEMVQNLQ-GPSNVEDPVQM-LMKDAVYNAVGLAAYELFDNVDFDQWFKNQLLGELQISHNRYKLIRRRVIWLIGQWISVKFKPELRPLLYEVILSLMQDPDLVVRIETATTLKLDILSSETEQ--FLPYL 491 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig74282.17590.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig74282.17590.1 >prot_M-pyrifera_M_contig74282.17590.1 ID=prot_M-pyrifera_M_contig74282.17590.1|Name=mRNA_M-pyrifera_M_contig74282.17590.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=215bp MFEDKIEAMKELLFVLLTKFMAMSNEELQLWENDPQELMQDQLADDYQYSback to top mRNA from alignment at M-pyrifera_M_contig74282:404..1075+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig74282.17590.1 ID=mRNA_M-pyrifera_M_contig74282.17590.1|Name=mRNA_M-pyrifera_M_contig74282.17590.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=672bp|location=Sequence derived from alignment at M-pyrifera_M_contig74282:404..1075+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig74282:404..1075+ >mRNA_M-pyrifera_M_contig74282.17590.1 ID=mRNA_M-pyrifera_M_contig74282.17590.1|Name=mRNA_M-pyrifera_M_contig74282.17590.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1290bp|location=Sequence derived from alignment at M-pyrifera_M_contig74282:404..1075+ (Macrocystis pyrifera P11B4 male)back to top |