mRNA_M-pyrifera_M_contig74209.17574.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig74209.17574.1
Unique NamemRNA_M-pyrifera_M_contig74209.17574.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig74209.17574.1 vs. uniprot
Match: A0A2D7RY22_9ACTN (Arylsulfotran_N domain-containing protein n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D7RY22_9ACTN)

HSP 1 Score: 165 bits (418), Expect = 2.750e-43
Identity = 90/206 (43.69%), Postives = 122/206 (59.22%), Query Frame = 1
Query:  310 HTLPLVGMRQDRTYEIVVELTDASGAAVDPITESFTTGVIDDNIPEFDITVADPERRSPGITIVETNTVRAAIPSDFGGNAVVGLDEDDEIVWYYNSDR----FNGAVQQTPEGEVAAQNDPFGMTVHAITGEVLRRYYPDREG-ADVARVEDGVELIPYHAEWMRLDTVHHDLQWQDDGTALALSRTLHPVAVERQQEL-CPGDE 909
            H LPLVG+R DRTY++ +E     G   D I  SFTTG + +NIP FDIT+ D  R +PG+TIVE N V+A +     GN ++ +D + E+VWYY S      F GAV Q P G V AQN PFG     I G ++R    D  G A++  +E G   +PYHAEW+ L TVHHD+    D T + +S TLH +  E++  + CP ++
Sbjct:  105 HNLPLVGLRSDRTYDVRIEARLPDGET-DHIDSSFTTGALPENIPNFDITI-DTNRAAPGVTIVELNPVQAVLNGI--GNPIIAVDNEGEVVWYYQSQAIAGAFTGAVSQGPNGTVYAQNHPFGAREFTIDGRLVRSISADPTGEAEITPIEGGGLNVPYHAEWIDLRTVHHDISPMPDNTVIFISSTLHEITPEQRAAVGCPPED 306          
BLAST of mRNA_M-pyrifera_M_contig74209.17574.1 vs. uniprot
Match: A0A6L8BD52_9PROT (Aryl-sulfate sulfotransferase n=2 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A6L8BD52_9PROT)

HSP 1 Score: 70.1 bits (170), Expect = 9.580e-10
Identity = 53/194 (27.32%), Postives = 86/194 (44.33%), Query Frame = 1
Query:  316 LPLVGMRQDRTYEIVVELTDASGAAV--DPITESFTTGVIDDN--IPEFDITVADPERRSPGITIV-----------ETNTVRAAIPSDFGGNAVVGLDEDDEIVWYYNSDRFNGAVQQTPEGEVAAQNDPFGMTVHAITGEVLRRYYPDREGADVARVEDGVELIPYHAEWMRLDTVHHDLQWQDDGTALALS 852
            LP++GMR DR +EI V + D++G ++  D + E  T  +  D   +P +D+ VA+ ER  PG+TI+           + N  + A  + +G   ++ LD + E+VWYY SD     + +   G +      F      + G  LR +Y +           G    P         T+HH      DG+ L+ S
Sbjct:  105 LPILGMRPDRRHEIRVTIFDSAGDSLQWDGVLEYTTPPLPVDRYVMPHYDVRVAETERMEPGVTILSVRRSMLTRAQDRNPAQQAFVTRYG--LLLALDNEGEVVWYYQSDDRIAGIDRLANGNIIYHMASFEAVEMDMLGNRLRSWYAEERPR-------GPSTAPGAVPIRGAQTLHHQPHEVRDGSFLSFS 289          
BLAST of mRNA_M-pyrifera_M_contig74209.17574.1 vs. uniprot
Match: UPI001CE27295 (aryl-sulfate sulfotransferase n=1 Tax=Fulvivirga sp. 1062 TaxID=2879465 RepID=UPI001CE27295)

HSP 1 Score: 68.6 bits (166), Expect = 2.980e-9
Identity = 43/182 (23.63%), Postives = 78/182 (42.86%), Query Frame = 1
Query:  307 AHTLPLVGMRQDRTYEIVVELTDASGAAVDPITESFTTGVIDDNIPEFDITVADPERRSPGITIVETNTVRAAIPSDFGGNAVVGLDEDDEIVWYYNSDRFNGAVQQTPEGEVAAQNDPFGMTVHA-ITGEVLRRYYPDREGADVARVEDGVELIPYHAEWMRLDTVHHDLQWQDDGTALAL 849
            +HT+P++GMR DR Y +++ + +  G  +   T S  T  + D+ P   +T ++ E   PG+T++           D     +V LD + E+VWYY +D      ++   G +    +  G      + G  +  ++    GA V  V +    +         D+ HHD+     G  L +
Sbjct:   82 SHTIPVLGMRPDREYSVILSIHEDKGEVITVDTLSIKTPPLPDDFPPITLTTSEKESLEPGVTMMNLFRWTGPFDDDTDWGLLVALDSEGEVVWYYQTDYGISEGRRMQSGNLFYYGEVDGRLFEIDMLGNTVNEWHTT--GAMVKPVSENSRAVD-------TDSFHHDVLQLPSGNFLGI 254          
BLAST of mRNA_M-pyrifera_M_contig74209.17574.1 vs. uniprot
Match: A0A352VSP2_9BACT (Arylsulfotran_N domain-containing protein (Fragment) n=3 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A352VSP2_9BACT)

HSP 1 Score: 62.4 bits (150), Expect = 2.940e-7
Identity = 44/169 (26.04%), Postives = 77/169 (45.56%), Query Frame = 1
Query:  310 HTLPLVGMRQDRTYEIVVELTDASGAAVDPITESFTTGVIDDNIPEFDITVADPERRSPGITIVETNTVR---AAIPSDFGGNAVVGLDEDDEIVWYYNSDRFNGAVQQTPEGEVAAQNDPFGMTVHAITGEVLRRYYPDREGADVARVEDGVELIPYHAEWMRLDTVH 807
            H +P++G+R    ++IVV  TD +G           T  + ++ P F +  ++PER  PG T+   N +R       +DFG  A+V +D   E+VWYY +D      +    G V  Q+         + G V+ +++      ++     GVE   +H E + + + H
Sbjct:  115 HRIPMLGLRAGTNHQIVVVATDEAGNETASDAIELGTDPLPEDFPRFVLKQSNPERMEPGATLF--NLIRWPEEGADNDFG--AIVIVDAQGEVVWYYVADHDILDARLLASGNVLYQSGRERGVEIDMLGNVVAQWHATGTPEEMPEGSVGVETETFHHELLEMPSGH 279          
BLAST of mRNA_M-pyrifera_M_contig74209.17574.1 vs. uniprot
Match: A0A2E3YQ63_9GAMM (Arylsulfotran_N domain-containing protein n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E3YQ63_9GAMM)

HSP 1 Score: 60.8 bits (146), Expect = 1.020e-6
Identity = 47/185 (25.41%), Postives = 80/185 (43.24%), Query Frame = 1
Query:  310 HTLPLVGMRQDRTYEIVVELTDASGAAVDPITESFTTGVIDDNIPEFDITVADPERRSPGITIVETN-TVRAAIPSDFGGNAVVGLDEDDEIVWYYNSDRFN-GAVQQTPEGEVAAQNDPFGMTVHAIT--GEVLRRYYPDREGADVARVEDGVELIPYHAEWMRLDTVHHDLQWQDDGTALALS 852
            H +P++G++ +RTY ++  L D  G +++   ++F T  + +  P   I V DP R  PG T+   N    A   +       V +D+  E +WYY  D      V++   G +A    P    +  I   G V R+++    G     +E  + +          D++HHD     +G  L LS
Sbjct:   83 HEVPVLGLKSERTYNVIAVLEDMDGRSIETPAQAFETPPLPNTFPTPTINVRDPSRMEPGFTLFNVNGRWEADGTATLENLPAVVVDDQGEFIWYYIPDGHRVHDVRRLKNGNMAYTVLPGHNQLIEIDMLGNVQRKFH--MTGMAEESIEGSISV--------GTDSLHHDYVELPNGNLLLLS 257          
BLAST of mRNA_M-pyrifera_M_contig74209.17574.1 vs. uniprot
Match: A0A2G2MQ13_9PROT (Arylsulfotran_N domain-containing protein n=1 Tax=Robiginitomaculum sp. TaxID=2030823 RepID=A0A2G2MQ13_9PROT)

HSP 1 Score: 58.5 bits (140), Expect = 6.100e-6
Identity = 44/194 (22.68%), Postives = 80/194 (41.24%), Query Frame = 1
Query:  316 LPLVGMRQDRTYEIVVELTDASGAAVDPITE-SFTTG---VIDDNIPEFDITVADPERRSPGITIVET-----------NTVRAAIPSDFGGNAVVGLDEDDEIVWYYNSDRFNGAVQQTPEGEVAAQNDPFGMTVHAITGEVLRRYYPDREGADVARVEDGVELIPYHAEWMRLDTVHHDLQWQDDGTALALS 852
            LPLVGMR  R ++IVVE+    G  ++   E ++ T     +    P  D+  + P    PGIT++             +  +     +F  + ++ LD + E++WYY SD     V     G +  Q   +   +  + G  ++ +Y ++         + V  IP       + T+HH      +G  L+ +
Sbjct:  112 LPLVGMRAGREHKIVVEIQSVDGEKMNRSAEITYVTPPLPAMGKKFPTIDVKTSKPAEMEPGITLLSVRRRGFGRAIWMSKTQLKFSREF--SLLLALDNEGEVIWYYESDARIAGVDHLENGNILFQLGDYRTVIIDVLGNKVQEWYAEKRPYGKP---ENVNAIPIKG----IQTLHHQPHQMPNGHFLSFA 296          
BLAST of mRNA_M-pyrifera_M_contig74209.17574.1 vs. uniprot
Match: A0A5J4EBE9_9BACT (Arylsulfate sulfotransferase AssT n=2 Tax=Bacteria TaxID=2 RepID=A0A5J4EBE9_9BACT)

HSP 1 Score: 55.1 bits (131), Expect = 7.820e-5
Identity = 45/199 (22.61%), Postives = 80/199 (40.20%), Query Frame = 1
Query:  310 HTLPLVGMRQDRTYEIVVELTDASGAAVDPITE-SFTTGVIDDNIPEFDITVADPERRSPGITIVETNTVRAAIPSDFGGNAVVGLDEDDEIVWYYNSDRFNGAVQQTPEGEVAAQNDPFGMTVHAITGEVLRRYYPDREGADVARVEDGVELIPYHAEWMRLDTVHHDLQWQDDGTALALSRTLHPVAVERQQELCPG 903
            H L ++GMRQDRTY ++V      G  ++  T+   TT  +  N P   +   DP    PG T+++T         D     +V +D+  E+VWY+ +   +   ++   G   + ++  G+        V+       +          V++  +H      D V H+L  Q   +    SRT+    ++    L  G
Sbjct:   84 HVLTVLGMRQDRTYTVIVTAHTLDGITLESTTQLQVTTPPLPANFPVISLLSGDPALMQPGFTLMDTGR------KDGSAAFIVIVDDAAEVVWYFQTSSLS-ETERVASGSFLSLDEGSGLIRFINERGVVVNSVHSAQSHPATGNSVPVDVAEFHD-----DVVKHNLFAQYFTSIRDASRTVDNFPLDENDPLVTG 270          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig74209.17574.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A2D7RY22_9ACTN2.750e-4343.69Arylsulfotran_N domain-containing protein n=2 Tax=... [more]
A0A6L8BD52_9PROT9.580e-1027.32Aryl-sulfate sulfotransferase n=2 Tax=Proteobacter... [more]
UPI001CE272952.980e-923.63aryl-sulfate sulfotransferase n=1 Tax=Fulvivirga s... [more]
A0A352VSP2_9BACT2.940e-726.04Arylsulfotran_N domain-containing protein (Fragmen... [more]
A0A2E3YQ63_9GAMM1.020e-625.41Arylsulfotran_N domain-containing protein n=2 Tax=... [more]
A0A2G2MQ13_9PROT6.100e-622.68Arylsulfotran_N domain-containing protein n=1 Tax=... [more]
A0A5J4EBE9_9BACT7.820e-522.61Arylsulfate sulfotransferase AssT n=2 Tax=Bacteria... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig74209contigM-pyrifera_M_contig74209:5..913 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categorysignal peptide
Exons1
Model size909
Cds size909
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816640.614414-CDS-M-pyrifera_M_contig74209:4..9131622816640.614414-CDS-M-pyrifera_M_contig74209:4..913Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig74209 5..913 -
1692278093.3640919-CDS-M-pyrifera_M_contig74209:4..9131692278093.3640919-CDS-M-pyrifera_M_contig74209:4..913Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig74209 5..913 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig74209.17574.1prot_M-pyrifera_M_contig74209.17574.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig74209 5..913 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig74209.17574.1

>prot_M-pyrifera_M_contig74209.17574.1 ID=prot_M-pyrifera_M_contig74209.17574.1|Name=mRNA_M-pyrifera_M_contig74209.17574.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=303bp
MSRTPSRRLVISLVALTLVAMGCADDTDDASDAPPTTSSASTTSSTTVPV
APVSAMVTVDASTVSPIAATVTIEADAAVTARITATAEDHEVTTPTTAAT
AAAHTLPLVGMRQDRTYEIVVELTDASGAAVDPITESFTTGVIDDNIPEF
DITVADPERRSPGITIVETNTVRAAIPSDFGGNAVVGLDEDDEIVWYYNS
DRFNGAVQQTPEGEVAAQNDPFGMTVHAITGEVLRRYYPDREGADVARVE
DGVELIPYHAEWMRLDTVHHDLQWQDDGTALALSRTLHPVAVERQQELCP
GDE
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mRNA from alignment at M-pyrifera_M_contig74209:5..913-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig74209.17574.1 ID=mRNA_M-pyrifera_M_contig74209.17574.1|Name=mRNA_M-pyrifera_M_contig74209.17574.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=909bp|location=Sequence derived from alignment at M-pyrifera_M_contig74209:5..913- (Macrocystis pyrifera P11B4 male)
ATGTCTCGCACGCCGTCCCGCCGCCTCGTCATCTCCCTCGTGGCCCTGAC CCTGGTCGCGATGGGCTGCGCCGACGACACCGATGACGCGTCGGACGCCC CGCCCACGACCTCTTCTGCCTCGACGACATCCTCGACAACGGTGCCGGTG GCTCCGGTCAGCGCCATGGTGACCGTCGACGCGAGCACCGTCAGCCCGAT CGCGGCAACGGTGACCATCGAGGCAGACGCTGCGGTGACCGCCCGGATCA CGGCCACCGCCGAGGATCACGAGGTGACCACGCCGACCACGGCGGCCACC GCGGCCGCCCACACACTCCCCCTCGTCGGCATGCGCCAGGACCGCACCTA CGAGATCGTCGTCGAGTTGACCGATGCCTCCGGCGCTGCCGTCGACCCGA TCACCGAGTCGTTCACCACCGGTGTCATCGACGACAACATCCCCGAGTTC GACATCACCGTGGCCGACCCCGAGCGCCGCTCGCCCGGCATCACCATCGT CGAGACCAACACCGTTCGCGCCGCGATCCCCAGCGACTTCGGCGGCAACG CCGTGGTCGGTCTCGACGAGGACGACGAGATCGTCTGGTACTACAACTCC GATCGCTTCAACGGCGCCGTGCAGCAGACACCCGAGGGTGAGGTCGCCGC CCAGAACGACCCGTTCGGCATGACCGTCCACGCGATCACCGGCGAGGTGC TCCGTCGTTACTACCCCGACCGGGAGGGCGCCGACGTCGCCCGCGTCGAG GACGGCGTCGAGCTGATCCCCTACCACGCCGAATGGATGCGCCTCGACAC CGTGCACCACGACCTCCAGTGGCAAGACGACGGCACGGCCCTCGCCCTGT CTCGCACGCTCCACCCAGTTGCCGTCGAGCGTCAACAGGAGCTCTGCCCC GGCGACGAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig74209:5..913-

>mRNA_M-pyrifera_M_contig74209.17574.1 ID=mRNA_M-pyrifera_M_contig74209.17574.1|Name=mRNA_M-pyrifera_M_contig74209.17574.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1818bp|location=Sequence derived from alignment at M-pyrifera_M_contig74209:5..913- (Macrocystis pyrifera P11B4 male)
ATGTCTCGCACGCCGTCCCGCCGCCTCGTCATCTCCCTCGTGGCCCTGAC
CCTGGTCGCGATGGGCTGCGCCGACGACACCGATGACGCGTCGGACGCCC
CGCCCACGACCTCTTCTGCCTCGACGACATCCTCGACAACGGTGCCGGTG
GCTCCGGTCAGCGCCATGGTGACCGTCGACGCGAGCACCGTCAGCCCGAT
CGCGGCAACGGTGACCATCGAGGCAGACGCTGCGGTGACCGCCCGGATCA
CGGCCACCGCCGAGGATCACGAGGTGACCACGCCGACCACGGCGGCCACC
GCGGCCGCCCACACACTCCCCCTCGTCGGCATGCGCCAGGACCGCACCTA
CGAGATCGTCGTCGAGTTGACCGATGCCTCCGGCGCTGCCGTCGACCCGA
TCACCGAGTCGTTCACCACCGGTGTCATCGACGACAACATCCCCGAGTTC
GACATCACCGTGGCCGACCCCGAGCGCCGCTCGCCCGGCATCACCATCGT
CGAGACCAACACCGTTCGCGCCGCGATCCCCAGCGACTTCGGCGGCAACG
CCGTGGTCGGTCTCGACGAGGACGACGAGATCGTCTGGTACTACAACTCC
GATCGCTTCAACGGCGCCGTGCAGCAGACACCCGAGGGTGAGGTCGCCGC
CCAGAACGACCCGTTCGGCATGACCGTCCACGCGATCACCGGCGAGGTGC
TCCGTCGTTACTACCCCGACCGGGAGGGCGCCGACGTCGCCCGCGTCGAG
GACGGCGTCGAGCTGATCCCCTACCACGCCGAATGGATGCGCCTCGACAC
CGTGCACCACGACCTCCAGTGGCAAGACGACGGCACGGCCCTCGCCCTGT
CTCGCACGCTCCACCCAGTTGCCGTCGAGCGTCAACAGGAGCTCTGCCCC
GGCGACGAAATGTCTCGCACGCCGTCCCGCCGCCTCGTCATCTCCCTCGT
GGCCCTGACCCTGGTCGCGATGGGCTGCGCCGACGACACCGATGACGCGT
CGGACGCCCCGCCCACGACCTCTTCTGCCTCGACGACATCCTCGACAACG
GTGCCGGTGGCTCCGGTCAGCGCCATGGTGACCGTCGACGCGAGCACCGT
CAGCCCGATCGCGGCAACGGTGACCATCGAGGCAGACGCTGCGGTGACCG
CCCGGATCACGGCCACCGCCGAGGATCACGAGGTGACCACGCCGACCACG
GCGGCCACCGCGGCCGCCCACACACTCCCCCTCGTCGGCATGCGCCAGGA
CCGCACCTACGAGATCGTCGTCGAGTTGACCGATGCCTCCGGCGCTGCCG
TCGACCCGATCACCGAGTCGTTCACCACCGGTGTCATCGACGACAACATC
CCCGAGTTCGACATCACCGTGGCCGACCCCGAGCGCCGCTCGCCCGGCAT
CACCATCGTCGAGACCAACACCGTTCGCGCCGCGATCCCCAGCGACTTCG
GCGGCAACGCCGTGGTCGGTCTCGACGAGGACGACGAGATCGTCTGGTAC
TACAACTCCGATCGCTTCAACGGCGCCGTGCAGCAGACACCCGAGGGTGA
GGTCGCCGCCCAGAACGACCCGTTCGGCATGACCGTCCACGCGATCACCG
GCGAGGTGCTCCGTCGTTACTACCCCGACCGGGAGGGCGCCGACGTCGCC
CGCGTCGAGGACGGCGTCGAGCTGATCCCCTACCACGCCGAATGGATGCG
CCTCGACACCGTGCACCACGACCTCCAGTGGCAAGACGACGGCACGGCCC
TCGCCCTGTCTCGCACGCTCCACCCAGTTGCCGTCGAGCGTCAACAGGAG
CTCTGCCCCGGCGACGAA
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