mRNA_M-pyrifera_M_contig74102.17549.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig74102.17549.1
Unique NamemRNA_M-pyrifera_M_contig74102.17549.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig74102.17549.1 vs. uniprot
Match: A0A0R3SPP5_HYMDI (Histone deacetylase n=2 Tax=Hymenolepididae TaxID=6214 RepID=A0A0R3SPP5_HYMDI)

HSP 1 Score: 352 bits (904), Expect = 1.650e-116
Identity = 158/244 (64.75%), Postives = 199/244 (81.56%), Query Frame = 1 
Query:    1 NWSGGMHHAKKGEACGFCYVNDIVLGILELLKVHKRVLYIDIDIHHGDGVEEAFASSDRVMTVSFHRFGGFFPGSGHIRDVGEGKGRFYALNCPLFSGMDDDSYRELFRPVIASVMQSFRPEAVVLECGADSIAGDRLGCFNLTTNGHGDCVSFVKSFGLPTLVLGGGGYTPRNVARAWAYETSILLSTPLPDAIPPHTWSESFAPHFHLHIPPDKTFENRNSPTYLNRCRAALLEALRALPHA 732
            NW GG+HHAKK EA GFCYVNDIV+GILELLK H+RVLY+DIDIHHGDGVEEAF ++DRVMTVSFH++G +FPG+G ++D+G G+G++YA+NCPL  GMDD+ Y+ +FRPVI+ VM++FRP AVVL+CGADS++GDRLGCFNL+  GHG CV F++SF +P L+LGGGGYT RNVAR W YETSI L+T +P+ +P + + E F P F LHI P  T  N NSP Y++R ++ L E LR LPHA
Sbjct:  132 NWGGGLHHAKKSEASGFCYVNDIVMGILELLKYHQRVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLKDIGAGRGKYYAVNCPLRDGMDDECYQGIFRPVISKVMETFRPGAVVLQCGADSLSGDRLGCFNLSLKGHGKCVEFLRSFDIPLLMLGGGGYTIRNVARCWTYETSIALNTEIPNDLPYNDYYEYFGPEFKLHISPSNT-PNMNSPEYIDRVKSKLFENLRMLPHA 374
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BLAST of mRNA_M-pyrifera_M_contig74102.17549.1 vs. uniprot
Match: H3G8C8_PHYRM (Histone deacetylase n=22 Tax=Peronosporaceae TaxID=4777 RepID=H3G8C8_PHYRM)

HSP 1 Score: 350 bits (897), Expect = 6.020e-116
Identity = 161/244 (65.98%), Postives = 195/244 (79.92%), Query Frame = 1 
Query:    1 NWSGGMHHAKKGEACGFCYVNDIVLGILELLKVHKRVLYIDIDIHHGDGVEEAFASSDRVMTVSFHRFGGFFPGSGHIRDVGEGKGRFYALNCPLFSGMDDDSYRELFRPVIASVMQSFRPEAVVLECGADSIAGDRLGCFNLTTNGHGDCVSFVKSFGLPTLVLGGGGYTPRNVARAWAYETSILLSTPLPDAIPPHTWSESFAPHFHLHIPPDKTFENRNSPTYLNRCRAALLEALRALPHA 732
            NW+GG+HHAKK E  GFCYVNDIVLGILELLK H RVLYIDID+HHGDGVEEAF  +DRVMTVSFH++G FFPG+G I+D+G   G++YA+N PL SGM+D+SY  +F+PVI  VM++F P AVVL+CGADS+ GDRLGCFN+TT GHG+CV FVKSFGLP LVLGGGGYT RNV+RAWA+ETSILL   + + IP + + E +AP+F LH+ PD   EN NS  YL+ C+  + E LRAL  A
Sbjct:  134 NWAGGLHHAKKSEGSGFCYVNDIVLGILELLKYHPRVLYIDIDVHHGDGVEEAFYVTDRVMTVSFHKYGDFFPGTGDIKDIGTKNGKYYAVNFPLLSGMNDESYESVFKPVIQQVMETFCPSAVVLQCGADSLTGDRLGCFNVTTRGHGECVKFVKSFGLPMLVLGGGGYTIRNVSRAWAFETSILLDEEVSNNIPYNDYFEFYAPNFKLHLEPDPDLENANSREYLDECKVKIFENLRALTGA 377
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BLAST of mRNA_M-pyrifera_M_contig74102.17549.1 vs. uniprot
Match: A0A1S4DCM4_TOBAC (Histone deacetylase n=1 Tax=Nicotiana tabacum TaxID=4097 RepID=A0A1S4DCM4_TOBAC)

HSP 1 Score: 344 bits (883), Expect = 1.020e-115
Identity = 158/244 (64.75%), Postives = 195/244 (79.92%), Query Frame = 1 
Query:    1 NWSGGMHHAKKGEACGFCYVNDIVLGILELLKVHKRVLYIDIDIHHGDGVEEAFASSDRVMTVSFHRFGGFFPGSGHIRDVGEGKGRFYALNCPLFSGMDDDSYRELFRPVIASVMQSFRPEAVVLECGADSIAGDRLGCFNLTTNGHGDCVSFVKSFGLPTLVLGGGGYTPRNVARAWAYETSILLSTPLPDAIPPHTWSESFAPHFHLHIPPDKTFENRNSPTYLNRCRAALLEALRALPHA 732
            NW+GG+HHAKK EA GFCYVNDIVLGILELLKVH+RVLYIDIDIHHGDGVEEAF ++DRVMTVSFH+FG FFPG+GHI+D+G G+G++YALN PL  GMDDDS+  LFRPVI  VM+ ++P+AVVL+CGADS+AGDRLGCFNL+  GH DC+ F++SF +P +VLGGGGYT RNVAR W YET++ +     + +P + + E F P + LH+ P+   EN+NSP  L + R  LLE L  LPHA
Sbjct:    2 NWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYIDIDIHHGDGVEEAFFTTDRVMTVSFHKFGDFFPGTGHIKDIGAGQGKYYALNVPLNDGMDDDSFGRLFRPVIQKVMEVYQPDAVVLQCGADSLAGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPGNKLPYNEYYEYFGPDYTLHVEPNP-MENKNSPRDLEKIRNILLEQLSQLPHA 244
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BLAST of mRNA_M-pyrifera_M_contig74102.17549.1 vs. uniprot
Match: K3WLG8_GLOUD (Histone deacetylase n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WLG8_GLOUD)

HSP 1 Score: 348 bits (892), Expect = 3.030e-115
Identity = 161/244 (65.98%), Postives = 194/244 (79.51%), Query Frame = 1 
Query:    1 NWSGGMHHAKKGEACGFCYVNDIVLGILELLKVHKRVLYIDIDIHHGDGVEEAFASSDRVMTVSFHRFGGFFPGSGHIRDVGEGKGRFYALNCPLFSGMDDDSYRELFRPVIASVMQSFRPEAVVLECGADSIAGDRLGCFNLTTNGHGDCVSFVKSFGLPTLVLGGGGYTPRNVARAWAYETSILLSTPLPDAIPPHTWSESFAPHFHLHIPPDKTFENRNSPTYLNRCRAALLEALRALPHA 732
            NW+GG+HHAKK E  GFCYVNDIVLGILELLK H RVLYIDID+HHGDGVEEAF  +DRVMTVSFH++G FFPG+G I+D+G   G++YA+N PL SG+DD+SY  +F+PVI  VM++F P AVVL+CGADS+ GDRLGCFN+TT GHG+CV FVKSFGLPTLVLGGGGYT RNV+RAWAYETS+LL   + + IP + + E +AP+F LH+ PD   EN NS  YL   +  + E LRAL  A
Sbjct:  134 NWAGGLHHAKKSEGSGFCYVNDIVLGILELLKYHPRVLYIDIDVHHGDGVEEAFYVTDRVMTVSFHKYGDFFPGTGDIKDIGAKNGKYYAVNFPLLSGIDDESYESVFKPVIQKVMETFCPAAVVLQCGADSLTGDRLGCFNVTTKGHGECVRFVKSFGLPTLVLGGGGYTIRNVSRAWAYETSVLLDEEVSNNIPYNDYFEYYAPNFKLHLEPDLDLENANSKEYLEEYKIKIFENLRALTGA 377
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BLAST of mRNA_M-pyrifera_M_contig74102.17549.1 vs. uniprot
Match: A0A3S5AUL2_9PLAT (Histone deacetylase n=1 Tax=Protopolystoma xenopodis TaxID=117903 RepID=A0A3S5AUL2_9PLAT)

HSP 1 Score: 348 bits (893), Expect = 3.310e-115
Identity = 154/244 (63.11%), Postives = 196/244 (80.33%), Query Frame = 1 
Query:    1 NWSGGMHHAKKGEACGFCYVNDIVLGILELLKVHKRVLYIDIDIHHGDGVEEAFASSDRVMTVSFHRFGGFFPGSGHIRDVGEGKGRFYALNCPLFSGMDDDSYRELFRPVIASVMQSFRPEAVVLECGADSIAGDRLGCFNLTTNGHGDCVSFVKSFGLPTLVLGGGGYTPRNVARAWAYETSILLSTPLPDAIPPHTWSESFAPHFHLHIPPDKTFENRNSPTYLNRCRAALLEALRALPHA 732
            NW GG+HHAKK EA GFCYVNDIV+GILELLK H+RVLY+DIDIHHGDGVEEAF ++DRVMTVSFH++G +FPG+G ++D+G GKG++YA+NCPL  GMDD+ Y  +F+PV++ VM+ FRP A+VL+CGADS++GDRLGCFNL+  GHG CV F++S+ LP L+LGGGGYT RNVAR W YETS+ L+T +P+ +P + + E F P F LHI P     N+N+P YL R +A L E LR +PHA
Sbjct:  132 NWGGGLHHAKKSEASGFCYVNDIVMGILELLKYHQRVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLKDIGAGKGKYYAVNCPLRDGMDDECYERIFKPVVSKVMEVFRPGAIVLQCGADSLSGDRLGCFNLSLKGHGKCVEFIRSYPLPLLLLGGGGYTIRNVARCWTYETSLALATEIPNDLPYNDYYEYFGPDFKLHINPSN-MSNQNTPEYLERIKAKLFENLRMIPHA 374
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BLAST of mRNA_M-pyrifera_M_contig74102.17549.1 vs. uniprot
Match: A0A067C095_SAPPC (Histone deacetylase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C095_SAPPC)

HSP 1 Score: 346 bits (888), Expect = 6.300e-115
Identity = 162/241 (67.22%), Postives = 193/241 (80.08%), Query Frame = 1 
Query:    1 NWSGGMHHAKKGEACGFCYVNDIVLGILELLKVHKRVLYIDIDIHHGDGVEEAFASSDRVMTVSFHRFGGFFPGSGHIRDVGEGKGRFYALNCPLFSGMDDDSYRELFRPVIASVMQSFRPEAVVLECGADSIAGDRLGCFNLTTNGHGDCVSFVKSFGLPTLVLGGGGYTPRNVARAWAYETSILLSTPLPDAIPPHTWSESFAPHFHLHIPPDKTFENRNSPTYLNRCRAALLEALRAL 723
            NW+GG+HHAKK EA GFCYVNDIVLGILELLK H RVLYIDID+HHGDGVEEAF  +DRVMTVSFH++G FFPG+G I+DVG   G++YA+N PL SG+DD+SY  +F+PVI  VM+SFRP AVVL+CGADS+ GDRLGCFNLT  GHG+CV FVKSFGLPTLVLGGGGYT RNV+RAWAYETS++L   + + IP + + E +AP F LH+ P+   EN NS TYL   +  + E LR L
Sbjct:  131 NWAGGLHHAKKSEASGFCYVNDIVLGILELLKYHPRVLYIDIDVHHGDGVEEAFYVTDRVMTVSFHKYGDFFPGTGDIKDVGAKAGKYYAVNVPLKSGIDDESYLSIFKPVIEKVMESFRPGAVVLQCGADSLTGDRLGCFNLTVKGHGECVRFVKSFGLPTLVLGGGGYTIRNVSRAWAYETSVVLEEQVSNDIPFNEYFEYYAPSFKLHLDPNPELENCNSRTYLEDIKVKIFEHLRML 371
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BLAST of mRNA_M-pyrifera_M_contig74102.17549.1 vs. uniprot
Match: A0A2P8XGM4_BLAGE (Histone deacetylase n=1 Tax=Blattella germanica TaxID=6973 RepID=A0A2P8XGM4_BLAGE)

HSP 1 Score: 344 bits (883), Expect = 6.980e-115
Identity = 155/244 (63.52%), Postives = 192/244 (78.69%), Query Frame = 1 
Query:    1 NWSGGMHHAKKGEACGFCYVNDIVLGILELLKVHKRVLYIDIDIHHGDGVEEAFASSDRVMTVSFHRFGGFFPGSGHIRDVGEGKGRFYALNCPLFSGMDDDSYRELFRPVIASVMQSFRPEAVVLECGADSIAGDRLGCFNLTTNGHGDCVSFVKSFGLPTLVLGGGGYTPRNVARAWAYETSILLSTPLPDAIPPHTWSESFAPHFHLHIPPDKTFENRNSPTYLNRCRAALLEALRALPHA 732
            NW GG+HHAKK EA GFCYVNDIVLGILELLK H+RVLYIDID+HHGDGVEEAF ++DRVMTVSFH++G +FPG+G +RD+G GKG++YA+N PL  GMDD+SY  +F P+I+ VM++F+P AVVL+CGADS+ GDRLGCFNLT  GHG CV FVK +GLP L++GGGGYT RNV+R W YETS+ L T + + +P + + E F P F LHI P     N+N+P YL + +  L E LR LPHA
Sbjct:   43 NWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDESYESIFVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKKYGLPFLMVGGGGYTIRNVSRCWTYETSVALGTEIANELPYNDYFEYFGPDFKLHISPSN-MANQNTPEYLEKIKTRLFENLRMLPHA 285
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BLAST of mRNA_M-pyrifera_M_contig74102.17549.1 vs. uniprot
Match: A0A812QE53_SYMMI (Histone deacetylase n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812QE53_SYMMI)

HSP 1 Score: 344 bits (882), Expect = 7.130e-115
Identity = 158/244 (64.75%), Postives = 191/244 (78.28%), Query Frame = 1 
Query:    1 NWSGGMHHAKKGEACGFCYVNDIVLGILELLKVHKRVLYIDIDIHHGDGVEEAFASSDRVMTVSFHRFGGFFPGSGHIRDVGEGKGRFYALNCPLFSGMDDDSYRELFRPVIASVMQSFRPEAVVLECGADSIAGDRLGCFNLTTNGHGDCVSFVKSFGLPTLVLGGGGYTPRNVARAWAYETSILLSTPLPDAIPPHTWSESFAPHFHLHIPPDKTFENRNSPTYLNRCRAALLEALRALPHA 732
            NWSGG+HHAKK EA GFCY+ND VL ILELLK H+RVLYIDIDIHHGDGVEEAF +++RVMTVSFH+FG +FPG+G ++D G  +G  YA+NCPL  GMDD+SYR LFRPVI  VM+ FRP A+VL+CGADS++GDRLGCFNL+  GH DCV FV  FG+PTLVLGGGGYT RNV R WAYETS++L TP+ DA+P + + E FAP + LH+P     EN N+P YL+  R  L + L  + HA
Sbjct:   84 NWSGGLHHAKKSEASGFCYINDCVLAILELLKSHQRVLYIDIDIHHGDGVEEAFYTTNRVMTVSFHKFGEYFPGTGDVKDKGYAEGTNYAINCPLHDGMDDESYRSLFRPVIGKVMEKFRPGAIVLQCGADSLSGDRLGCFNLSLKGHADCVDFVMGFGVPTLVLGGGGYTLRNVPRCWAYETSVILDTPVKDALPYNDYFEYFAPDYKLHLPVSN-MENLNTPRYLDDIRTQLFQILDGVEHA 326
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BLAST of mRNA_M-pyrifera_M_contig74102.17549.1 vs. uniprot
Match: A0A2D4BF91_PYTIN (Histone deacetylase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BF91_PYTIN)

HSP 1 Score: 347 bits (889), Expect = 7.600e-115
Identity = 160/244 (65.57%), Postives = 193/244 (79.10%), Query Frame = 1 
Query:    1 NWSGGMHHAKKGEACGFCYVNDIVLGILELLKVHKRVLYIDIDIHHGDGVEEAFASSDRVMTVSFHRFGGFFPGSGHIRDVGEGKGRFYALNCPLFSGMDDDSYRELFRPVIASVMQSFRPEAVVLECGADSIAGDRLGCFNLTTNGHGDCVSFVKSFGLPTLVLGGGGYTPRNVARAWAYETSILLSTPLPDAIPPHTWSESFAPHFHLHIPPDKTFENRNSPTYLNRCRAALLEALRALPHA 732
            NW+GG+HHAKK E  GFCYVNDIVLGILELLK H RVLYIDID+HHGDGVEEAF  +DRVMTVSFH++G FFPG+G I+D+G   G++Y++N PL SGMDD+SY  +F+PVI  VM++F P AVVL+CGADS+ GDRLGCFN+TT GHG+CV FVKSFGLPTLVLGGGGYT RNV+RAWAYETS+LL   + + IP + + E +AP F LH+ PD   EN NS  YL   +  + E L+AL  A
Sbjct:  132 NWAGGLHHAKKAEGSGFCYVNDIVLGILELLKYHPRVLYIDIDVHHGDGVEEAFYVTDRVMTVSFHKYGDFFPGTGDIKDIGAKNGKYYSVNFPLLSGMDDESYESVFKPVIQKVMETFCPSAVVLQCGADSLTGDRLGCFNVTTRGHGECVRFVKSFGLPTLVLGGGGYTIRNVSRAWAYETSVLLDEDVSNNIPYNDYFEYYAPTFKLHLEPDPEMENNNSREYLEEYKIKIFENLKALDGA 375
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BLAST of mRNA_M-pyrifera_M_contig74102.17549.1 vs. uniprot
Match: A0A7S4ITW8_9EUKA (Histone deacetylase (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4ITW8_9EUKA)

HSP 1 Score: 352 bits (904), Expect = 1.600e-114
Identity = 164/244 (67.21%), Postives = 194/244 (79.51%), Query Frame = 1 
Query:    1 NWSGGMHHAKKGEACGFCYVNDIVLGILELLKVHKRVLYIDIDIHHGDGVEEAFASSDRVMTVSFHRFGGFFPGSGHIRDVGEGKGRFYALNCPLFSGMDDDSYRELFRPVIASVMQSFRPEAVVLECGADSIAGDRLGCFNLTTNGHGDCVSFVKSFGLPTLVLGGGGYTPRNVARAWAYETSILLSTPLPDAIPPHTWSESFAPHFHLHIPPDKTFENRNSPTYLNRCRAALLEALRALPHA 732
            NW+GG+HHAKK EA GFCYVNDIVL ILELLK H RVLYIDIDIHHGDGVEEAF ++DRVMTVSFH+FG FFPG+GHIRDVG  KG++YALN PL  G+DD+SY  +F+PVI+ VM+ +RP AVV++CGADS++GDRLGCFNLTT GHG CV F+KSF +P LVLGGGGYT RNVAR WAYETS+ L   +PD +P + + E + P + LHI P    EN N+P YL  C  ALLE L+ L HA
Sbjct:  134 NWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHSRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKFGEFFPGTGHIRDVGVTKGKYYALNYPLRDGIDDESYVNIFKPVISRVMEMYRPGAVVIQCGADSLSGDRLGCFNLTTKGHGACVEFIKSFNVPVLVLGGGGYTIRNVARCWAYETSVCLGKEIPDELPYNDYLEYYGPEYRLHITPTN-MENLNTPEYLESCTQALLENLKHLDHA 376
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig74102.17549.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0R3SPP5_HYMDI1.650e-11664.75Histone deacetylase n=2 Tax=Hymenolepididae TaxID=... [more]
H3G8C8_PHYRM6.020e-11665.98Histone deacetylase n=22 Tax=Peronosporaceae TaxID... [more]
A0A1S4DCM4_TOBAC1.020e-11564.75Histone deacetylase n=1 Tax=Nicotiana tabacum TaxI... [more]
K3WLG8_GLOUD3.030e-11565.98Histone deacetylase n=2 Tax=Pythiaceae TaxID=4782 ... [more]
A0A3S5AUL2_9PLAT3.310e-11563.11Histone deacetylase n=1 Tax=Protopolystoma xenopod... [more]
A0A067C095_SAPPC6.300e-11567.22Histone deacetylase n=2 Tax=Saprolegnia TaxID=4769... [more]
A0A2P8XGM4_BLAGE6.980e-11563.52Histone deacetylase n=1 Tax=Blattella germanica Ta... [more]
A0A812QE53_SYMMI7.130e-11564.75Histone deacetylase n=1 Tax=Symbiodinium microadri... [more]
A0A2D4BF91_PYTIN7.600e-11565.57Histone deacetylase n=1 Tax=Pythium insidiosum Tax... [more]
A0A7S4ITW8_9EUKA1.600e-11467.21Histone deacetylase (Fragment) n=1 Tax=Vannella sp... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig74102contigM-pyrifera_M_contig74102:243..1085 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score342.4
Seed ortholog evalue1.9e-91
Seed eggNOG ortholog67593.Physo109034
Preferred nameHDAC3
KEGG koko:K06067,ko:K11404,ko:K11483
KEGG Pathwayko04110,ko04213,ko04330,ko04919,ko05016,ko05034,ko05165,ko05169,ko05200,ko05202,ko05203,ko05220,map04110,map04213,map04330,map04919,map05016,map05034,map05165,map05169,map05200,map05202,map05203,map05220
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000118,GO:0000122,GO:0000226,GO:0000228,GO:0000785,GO:0000790,GO:0000819,GO:0001525,GO:0001558,GO:0001568,GO:0001817,GO:0001818,GO:0001889,GO:0001932,GO:0001933,GO:0001934,GO:0001944,GO:0003002,GO:0003006,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003712,GO:0003714,GO:0003824,GO:0004407,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0005794,GO:0005819,GO:0005829,GO:0005856,GO:0005874,GO:0005876,GO:0005886,GO:0006139,GO:0006259,GO:0006323,GO:0006325,GO:0006333,GO:0006338,GO:0006342,GO:0006355,GO:0006357,GO:0006464,GO:0006476,GO:0006725,GO:0006807,GO:0006950,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007051,GO:0007059,GO:0007062,GO:0007063,GO:0007154,GO:0007275,GO:0007346,GO:0007389,GO:0007399,GO:0007406,GO:0007548,GO:0007623,GO:0008104,GO:0008134,GO:0008150,GO:0008152,GO:0008285,GO:0009410,GO:0009605,GO:0009612,GO:0009628,GO:0009653,GO:0009719,GO:0009725,GO:0009888,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009953,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0009991,GO:0010033,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010562,GO:0010563,GO:0010564,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010639,GO:0010646,GO:0010647,GO:0010648,GO:0010721,GO:0010941,GO:0010942,GO:0010948,GO:0012505,GO:0014070,GO:0015630,GO:0016020,GO:0016043,GO:0016202,GO:0016458,GO:0016569,GO:0016570,GO:0016575,GO:0016787,GO:0016810,GO:0016811,GO:0017053,GO:0017136,GO:0019213,GO:0019216,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0019899,GO:0019904,GO:0022008,GO:0022402,GO:0022414,GO:0022607,GO:0023051,GO:0023056,GO:0023057,GO:0030154,GO:0030307,GO:0030332,GO:0030544,GO:0031072,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031396,GO:0031397,GO:0031399,GO:0031400,GO:0031401,GO:0031490,GO:0031497,GO:0031507,GO:0031647,GO:0031667,GO:0031668,GO:0031960,GO:0031974,GO:0031981,GO:0032006,GO:0032008,GO:0032204,GO:0032268,GO:0032269,GO:0032270,GO:0032386,GO:0032387,GO:0032388,GO:0032501,GO:0032502,GO:0032507,GO:0032652,GO:0032680,GO:0032692,GO:0032720,GO:0032870,GO:0032872,GO:0032873,GO:0032874,GO:0032879,GO:0032880,GO:0032922,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0033045,GO:0033157,GO:0033365,GO:0033554,GO:0033558,GO:0033993,GO:0034399,GO:0034401,GO:0034405,GO:0034504,GO:0034613,GO:0034641,GO:0034728,GO:0034739,GO:0034967,GO:0034979,GO:0035239,GO:0035295,GO:0035601,GO:0036211,GO:0040008,GO:0040014,GO:0040020,GO:0040029,GO:0042127,GO:0042221,GO:0042262,GO:0042306,GO:0042307,GO:0042325,GO:0042326,GO:0042327,GO:0042493,GO:0042826,GO:0042981,GO:0043065,GO:0043066,GO:0043067,GO:0043068,GO:0043069,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043408,GO:0043409,GO:0043410,GO:0043412,GO:0043433,GO:0043523,GO:0043525,GO:0043696,GO:0043697,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0045129,GO:0045138,GO:0045185,GO:0045595,GO:0045596,GO:0045786,GO:0045814,GO:0045835,GO:0045843,GO:0045892,GO:0045893,GO:0045927,GO:0045934,GO:0045935,GO:0045936,GO:0045937,GO:0045944,GO:0046328,GO:0046329,GO:0046483,GO:0046661,GO:0046822,GO:0046823,GO:0046824,GO:0046825,GO:0046826,GO:0048511,GO:0048513,GO:0048514,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048545,GO:0048583,GO:0048584,GO:0048585,GO:0048634,GO:0048635,GO:0048638,GO:0048646,GO:0048699,GO:0048731,GO:0048732,GO:0048856,GO:0048869,GO:0048880,GO:0048881,GO:0048882,GO:0048915,GO:0048916,GO:0048925,GO:0050767,GO:0050768,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051020,GO:0051049,GO:0051050,GO:0051051,GO:0051052,GO:0051059,GO:0051090,GO:0051093,GO:0051098,GO:0051101,GO:0051128,GO:0051129,GO:0051147,GO:0051148,GO:0051153,GO:0051154,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051222,GO:0051223,GO:0051224,GO:0051225,GO:0051235,GO:0051239,GO:0051241,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051384,GO:0051445,GO:0051447,GO:0051457,GO:0051641,GO:0051651,GO:0051716,GO:0051726,GO:0051783,GO:0051784,GO:0051879,GO:0051960,GO:0051961,GO:0051983,GO:0055024,GO:0055026,GO:0060255,GO:0060284,GO:0060303,GO:0060341,GO:0060548,GO:0061008,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070201,GO:0070210,GO:0070302,GO:0070303,GO:0070304,GO:0070491,GO:0070727,GO:0070828,GO:0070868,GO:0070869,GO:0070887,GO:0070925,GO:0070932,GO:0070933,GO:0071103,GO:0071107,GO:0071214,GO:0071260,GO:0071310,GO:0071374,GO:0071495,GO:0071496,GO:0071498,GO:0071548,GO:0071704,GO:0071824,GO:0071840,GO:0071922,GO:0071944,GO:0072091,GO:0072358,GO:0072359,GO:0072595,GO:0080090,GO:0080134,GO:0080135,GO:0090087,GO:0090304,GO:0090316,GO:0090317,GO:0090598,GO:0097159,GO:0097327,GO:0097549,GO:0098732,GO:0098813,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0104004,GO:0140096,GO:0140110,GO:1900180,GO:1900182,GO:1901214,GO:1901216,GO:1901360,GO:1901363,GO:1901564,GO:1901654,GO:1901700,GO:1901861,GO:1901862,GO:1902494,GO:1902531,GO:1902532,GO:1902533,GO:1902679,GO:1902680,GO:1902692,GO:1903320,GO:1903321,GO:1903506,GO:1903507,GO:1903508,GO:1903555,GO:1903556,GO:1903827,GO:1903828,GO:1903829,GO:1904035,GO:1904037,GO:1904589,GO:1904591,GO:1904950,GO:1904951,GO:1905207,GO:1905208,GO:1905634,GO:1990679,GO:2000026,GO:2000112,GO:2000113,GO:2000177,GO:2000178,GO:2000241,GO:2000242,GO:2000647,GO:2000674,GO:2000676,GO:2000725,GO:2000726,GO:2001141
EggNOG free text desc.Histone deacetylase domain
EggNOG OGs3QF1E@4776,COG0123@1,KOG1342@2759
EC3.5.1.98
COG Functional cat.B
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03036
Exons1
Model size843
Cds size828
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816638.9974651-CDS-M-pyrifera_M_contig74102:242..10701622816638.9974651-CDS-M-pyrifera_M_contig74102:242..1070Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig74102 243..1070 -
1692278092.4036624-CDS-M-pyrifera_M_contig74102:242..10701692278092.4036624-CDS-M-pyrifera_M_contig74102:242..1070Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig74102 243..1070 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816639.008791-UTR-M-pyrifera_M_contig74102:1070..10851622816639.008791-UTR-M-pyrifera_M_contig74102:1070..1085Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig74102 1071..1085 -
1692278092.4187608-UTR-M-pyrifera_M_contig74102:1070..10851692278092.4187608-UTR-M-pyrifera_M_contig74102:1070..1085Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig74102 1071..1085 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig74102.17549.1prot_M-pyrifera_M_contig74102.17549.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig74102 243..1070 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig74102.17549.1

>prot_M-pyrifera_M_contig74102.17549.1 ID=prot_M-pyrifera_M_contig74102.17549.1|Name=mRNA_M-pyrifera_M_contig74102.17549.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=276bp
MHHAKKGEACGFCYVNDIVLGILELLKVHKRVLYIDIDIHHGDGVEEAFA
SSDRVMTVSFHRFGGFFPGSGHIRDVGEGKGRFYALNCPLFSGMDDDSYR
ELFRPVIASVMQSFRPEAVVLECGADSIAGDRLGCFNLTTNGHGDCVSFV
KSFGLPTLVLGGGGYTPRNVARAWAYETSILLSTPLPDAIPPHTWSESFA
PHFHLHIPPDKTFENRNSPTYLNRCRAALLEALRALPHAPSTPFVTLPSE
EAERQERVEREIREREAAERGEGGGA
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mRNA from alignment at M-pyrifera_M_contig74102:243..1085-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig74102.17549.1 ID=mRNA_M-pyrifera_M_contig74102.17549.1|Name=mRNA_M-pyrifera_M_contig74102.17549.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=843bp|location=Sequence derived from alignment at M-pyrifera_M_contig74102:243..1085- (Macrocystis pyrifera P11B4 male)
AACTGGTCTGGCGGGATGCACCATGCGAAGAAGGGAGAGGCGTGCGGGTT
TTGTTACGTGAACGACATTGTGCTGGGCATCTTGGAGCTGCTCAAGGTGC
ACAAGCGGGTTTTGTACATCGACATCGACATCCACCACGGGGACGGGGTG
GAGGAGGCGTTTGCAAGCAGCGACCGGGTGATGACGGTGAGTTTTCACCG
GTTTGGCGGGTTCTTCCCTGGGTCTGGTCACATTCGGGACGTTGGCGAAG
GCAAGGGGCGGTTTTATGCACTCAACTGTCCTCTTTTCAGTGGTATGGAT
GACGACAGCTACCGTGAACTCTTCCGGCCTGTGATCGCCAGCGTGATGCA
GTCCTTTCGACCCGAGGCTGTGGTTTTGGAATGTGGCGCTGACTCTATCG
CGGGTGATCGTCTGGGCTGTTTCAACCTGACCACCAACGGACATGGTGAT
TGCGTGTCTTTCGTCAAGTCCTTTGGCCTTCCCACACTCGTGCTGGGAGG
AGGAGGGTATACCCCTCGAAACGTGGCCAGAGCTTGGGCGTACGAAACTT
CCATCCTCCTCTCCACCCCGCTTCCCGATGCCATCCCACCACACACATGG
TCGGAATCCTTCGCTCCACACTTCCACCTCCACATCCCTCCAGACAAGAC
CTTCGAGAACAGAAACTCACCCACCTACCTCAACCGATGCAGGGCAGCTC
TCCTAGAAGCTCTACGCGCCCTCCCCCACGCCCCCTCCACCCCTTTCGTC
ACACTCCCCTCAGAAGAAGCAGAGAGGCAGGAGAGGGTAGAGCGAGAAAT
CAGGGAACGAGAGGCAGCAGAGAGGGGAGAAGGAGGAGGTGCG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig74102:243..1085-

>mRNA_M-pyrifera_M_contig74102.17549.1 ID=mRNA_M-pyrifera_M_contig74102.17549.1|Name=mRNA_M-pyrifera_M_contig74102.17549.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1656bp|location=Sequence derived from alignment at M-pyrifera_M_contig74102:243..1085- (Macrocystis pyrifera P11B4 male)
ATGCACCATGCGAAGAAGGGAGAGGCGTGCGGGTTTTGTTACGTGAACGA
CATTGTGCTGGGCATCTTGGAGCTGCTCAAGGTGCACAAGCGGGTTTTGT
ACATCGACATCGACATCCACCACGGGGACGGGGTGGAGGAGGCGTTTGCA
AGCAGCGACCGGGTGATGACGGTGAGTTTTCACCGGTTTGGCGGGTTCTT
CCCTGGGTCTGGTCACATTCGGGACGTTGGCGAAGGCAAGGGGCGGTTTT
ATGCACTCAACTGTCCTCTTTTCAGTGGTATGGATGACGACAGCTACCGT
GAACTCTTCCGGCCTGTGATCGCCAGCGTGATGCAGTCCTTTCGACCCGA
GGCTGTGGTTTTGGAATGTGGCGCTGACTCTATCGCGGGTGATCGTCTGG
GCTGTTTCAACCTGACCACCAACGGACATGGTGATTGCGTGTCTTTCGTC
AAGTCCTTTGGCCTTCCCACACTCGTGCTGGGAGGAGGAGGGTATACCCC
TCGAAACGTGGCCAGAGCTTGGGCGTACGAAACTTCCATCCTCCTCTCCA
CCCCGCTTCCCGATGCCATCCCACCACACACATGGTCGGAATCCTTCGCT
CCACACTTCCACCTCCACATCCCTCCAGACAAGACCTTCGAGAACAGAAA
CTCACCCACCTACCTCAACCGATGCAGGGCAGCTCTCCTAGAAGCTCTAC
GCGCCCTCCCCCACGCCCCCTCCACCCCTTTCGTCACACTCCCCTCAGAA
GAAGCAGAGAGGCAGGAGAGGGTAGAGCGAGAAATCAGGGAACGAGAGGC
AGCAGAGAGGGGAGAAGGAGGAGGTGCGATGCACCATGCGAAGAAGGGAG
AGGCGTGCGGGTTTTGTTACGTGAACGACATTGTGCTGGGCATCTTGGAG
CTGCTCAAGGTGCACAAGCGGGTTTTGTACATCGACATCGACATCCACCA
CGGGGACGGGGTGGAGGAGGCGTTTGCAAGCAGCGACCGGGTGATGACGG
TGAGTTTTCACCGGTTTGGCGGGTTCTTCCCTGGGTCTGGTCACATTCGG
GACGTTGGCGAAGGCAAGGGGCGGTTTTATGCACTCAACTGTCCTCTTTT
CAGTGGTATGGATGACGACAGCTACCGTGAACTCTTCCGGCCTGTGATCG
CCAGCGTGATGCAGTCCTTTCGACCCGAGGCTGTGGTTTTGGAATGTGGC
GCTGACTCTATCGCGGGTGATCGTCTGGGCTGTTTCAACCTGACCACCAA
CGGACATGGTGATTGCGTGTCTTTCGTCAAGTCCTTTGGCCTTCCCACAC
TCGTGCTGGGAGGAGGAGGGTATACCCCTCGAAACGTGGCCAGAGCTTGG
GCGTACGAAACTTCCATCCTCCTCTCCACCCCGCTTCCCGATGCCATCCC
ACCACACACATGGTCGGAATCCTTCGCTCCACACTTCCACCTCCACATCC
CTCCAGACAAGACCTTCGAGAACAGAAACTCACCCACCTACCTCAACCGA
TGCAGGGCAGCTCTCCTAGAAGCTCTACGCGCCCTCCCCCACGCCCCCTC
CACCCCTTTCGTCACACTCCCCTCAGAAGAAGCAGAGAGGCAGGAGAGGG
TAGAGCGAGAAATCAGGGAACGAGAGGCAGCAGAGAGGGGAGAAGGAGGA
GGTGCG
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