mRNA_M-pyrifera_M_contig73930.17513.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig73930.17513.1 vs. uniprot
Match: A0A5Q2RTR7_9ACTN (Exodeoxyribonuclease 7 large subunit n=2 Tax=Actinomarinicola tropica TaxID=2789776 RepID=A0A5Q2RTR7_9ACTN) HSP 1 Score: 273 bits (698), Expect = 3.270e-85 Identity = 167/330 (50.61%), Postives = 211/330 (63.94%), Query Frame = 1 Query: 1 SGKIRMDDGIEIRVRGRLAYYGPQSRMQLLMTLIDPSFTLGQLEIARTQLLAALGAEGILEANRKLQSPVVPLRVVVITSAASAAHADFTHELSSSELPFHLITIDTRVQGPEAVPMLVKAIAAAHAERPDVIAVVRGGGSRTDLMAFDHEDVARAIASASIPIFVGIGHEIDLSVADHVAHLTTKTPTACAAAIVERVRAFVTRVDDAELRLARVTEMQLAQEERRLVTAGNRIGLLAGGTVERQRSRLDLFDHRTVDASDRFL---ERQTDQLERLALRTTALDPAITLARGWSITRTAEGTLVRSPADAPPGTALTTTLADGTISST 981 +G + + D +E+R+RG + +Y PQ R+QL MT IDPS TLG+L R LL L A+G+L+ N +L+ VPLR+ ++TSA SAA ADF HEL S + + + +DTRVQG +V LV ++ A DV+AVVRGGGSRTDL+AFDHE VARAIAS +P+ GIGHEID SVAD VAH KTPTACAA + E V F TR D+ LA + L +++ + R+ A TVE +RLD +R L ER D LER ALDPA +ARGW+ITRTA+G LVR ADAP GTAL TT+ADGT+SST Sbjct: 99 AGGLALSDELEVRIRGEVLFYAPQGRVQLRMTGIDPSHTLGRLAADRDALLRRLAADGLLDRNGRLRLTPVPLRIGLVTSADSAAAADFLHELEQSGVGWSVTLLDTRVQGAGSVEHLVASLTVAAQLPLDVVAVVRGGGSRTDLVAFDHEAVARAIASMPVPVLTGIGHEIDESVADRVAHRAFKTPTACAAFLCEAVGRFRTRCDELGRHLAVRSRHALDRQDAHVHALATRVASGARTTVELGAARLDALGRAVATLPERSLLHAERHADALER---EVRALDPARVIARGWTITRTADGQLVRHLADAPIGTALRTTVADGTVSST 425
BLAST of mRNA_M-pyrifera_M_contig73930.17513.1 vs. uniprot
Match: A0A2E8NAP7_9ACTN (Exodeoxyribonuclease 7 large subunit n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E8NAP7_9ACTN) HSP 1 Score: 254 bits (650), Expect = 3.530e-78 Identity = 151/330 (45.76%), Postives = 192/330 (58.18%), Query Frame = 1 Query: 1 SGKIRMDDGIEIRVRGRLAYYGPQSRMQLLMTLIDPSFTLGQLEIARTQLLAALGAEGILEANRKLQSPVVPLRVVVITSAASAAHADFTHELSSSELPFHLITIDTRVQGPEAVPMLVKAIAAAHAERPDVIAVVRGGGSRTDLMAFDHEDVARAIASASIPIFVGIGHEIDLSVADHVAHLTTKTPTACAAAIVERVRAFVTRVDDAELRLARVTEMQLAQEERRLVTAGNRIGLLAGGTVERQRSRLDLFDHRTVDASDRFLERQTDQLERLALRTTALDPAITLARGWSITRTAEGTLVRSPADAPPGTALTTTLADGTISSTSNP 990 +G + + D + +R+R RL +YGP ++QL+M +DP+FTLG L R +LL L EG+L AN+ L PV PLR+ ++TS SAAHADFT EL +S LPF ++ D RVQG A L +A+ RPDV+AVVRGGGS DL AFD E +AR IA +P+ GIGHE+D SV D VAH KTPTACAAA+V++VR++ VD + + E L R L A T+ R RLD R A ALDPA +ARGWSITR +G LVRS D GT L TTLADGT++ST +P Sbjct: 93 AGGLTLSDDLLLRIRARLEFYGPHGKLQLIMDGVDPTFTLGXLAAERDRLLRTLADEGLLRANKALPVPVPPLRIGLVTSVGSAAHADFTQELVTSGLPFTVLECDARVQGDGAAVDLAEAVRTVATRRPDVVAVVRGGGSAADLAAFDAEVLARTIAGLDVPVVTGIGHEVDRSVVDEVAHTAFKTPTACAAALVDQVRSYAEEVDTLAAAVGDRATTVVDLAEGLLGNLAGRTALAASTTLARHADRLDAAADRLGRAPQAGXXXXXXXXXXXXXXLRALDPARIVARGWSITRRHDGCLVRSVEDVEVGTTLVTTLADGTVTSTVDP 422
BLAST of mRNA_M-pyrifera_M_contig73930.17513.1 vs. uniprot
Match: A0A800IBJ7_9ACTN (Exodeoxyribonuclease 7 large subunit n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A800IBJ7_9ACTN) HSP 1 Score: 248 bits (634), Expect = 5.940e-76 Identity = 148/327 (45.26%), Postives = 199/327 (60.86%), Query Frame = 1 Query: 1 SGKIRMDDGIEIRVRGRLAYYGPQSRMQLLMTLIDPSFTLGQLEIARTQLLAALGAEGILEANRKLQSPVVPLRVVVITSAASAAHADFTHELSSSELPFHLITIDTRVQGPEAVPMLVKAIAAAHAERPDVIAVVRGGGSRTDLMAFDHEDVARAIASASIPIFVGIGHEIDLSVADHVAHLTTKTPTACAAAIVERVRAFVTRVDDAELRLARVTEMQLAQEERRLVTAGNRIGLLAGGTVERQRSRLDLFDHRTVDASDRFLERQTDQLERLALRTTALDPAITLARGWSITRTAEGTLVRSPADAPPGTALTTTLADGTISST 981 +G + +++ +++R+ +L +Y P R+QL+M IDPSFTLG+L R +LL AL EG+++ NR + PLRV ++TS SAAHADF EL +S F+L+ DTRVQG A + + + +PDV+A+VRGGGS DL+ FD+E VAR IA+ +P+F GIGHEID SVAD VAH + KTPTACA A+V+ VR + + L + L ++R RI A + RQ RL R V + + L+R DQLE AL+ ALDPA LARGWSITRT +G L+ D L TTLADGT+SST Sbjct: 86 AGNLALENDLQVRILVKLDFYVPHGRLQLIMEGIDPSFTLGKLAADRDRLLRALADEGLIDQNRNVFLANPPLRVGLVTSIGSAAHADFVTELENSGFGFNLLVCDTRVQGEGAAEQVAHNLQVVASHKPDVVALVRGGGSAADLLVFDNELVARTIAALPVPVFTGIGHEIDQSVADLVAHKSFKTPTACAGALVDAVRLYDDLLTGLRAALGERVHVVLDYAQQRQDHLSQRITQSASHAINRQADRLKNLCQRLVVTAPQRLDRCHDQLETQALQLRALDPARVLARGWSITRTVDGRLITQIDDVSAADELITTLADGTVSST 412
BLAST of mRNA_M-pyrifera_M_contig73930.17513.1 vs. uniprot
Match: A0A6I3I9X0_9ACTN (Exodeoxyribonuclease 7 large subunit n=3 Tax=root TaxID=1 RepID=A0A6I3I9X0_9ACTN) HSP 1 Score: 247 bits (631), Expect = 1.340e-75 Identity = 148/331 (44.71%), Postives = 202/331 (61.03%), Query Frame = 1 Query: 1 SGKIRMDDGIEIRVRGRLAYYGPQSRMQLLMTLIDPSFTLGQLEIARTQLLAALGAEGILEANRKLQSPVVPLRVVVITSAASAAHADFTHELSSSELPFHLITIDTRVQGPEAVPMLVKAIAAAHAERPDVIAVVRGGGSRTDLMAFDHEDVARAIASASIPIFVGIGHEIDLSVADHVAHLTTKTPTACAAAIVERVRAFVTRVDDAELRLARVTEMQLAQEERRLVTAGNRIGLLAGGTVERQRSRLDLFDHRTVDASDRFLERQTDQLERLALRTTALDPAITLARGWSITRTAEGTLVRSPADAPPGTALTTTLADGTISSTSNPT 993 +G +R+++G+++R+RG L + R+QL M IDP+FTL LE R ++LA L AE +++ NR L +PL + +IT+ SAA ADF H L S LP+ + ID++VQG A + A+ A + + DVIA+VRGGGSR DL FDHE VARAIA++SIP+F GIGHEID SVAD VAH +KTPTACA A+V+ VTR + A +A + L E RL + L A + R + + ++ + L+ A R +A+DP TLARGWSITRT GT+VR AD PG L TT++DGTI+ST+ T Sbjct: 79 AGTVRLEEGVKVRIRGPLELWLAGGRLQLSMQDIDPAFTLEALESERERVLAVLRAENLIDRNRSLALIPMPLHIALITADESAAQADFMHSLIESRLPWRVEFIDSKVQGAGAERTIAAALRTAQSNKVDVIALVRGGGSRLDLAIFDHEVVARAIATSSIPVFTGIGHEIDTSVADVVAHCASKTPTACAEALVDIALEVVTRGETAWSDIAEIVSTTLDVERERLARSARHAALGARTRLTXXXXXXXXXTSRLNRSLETTMKSEKQSLDLFAARLSAVDPVRTLARGWSITRTDRGTVVRRSADVSPGDTLVTTVSDGTITSTATAT 409
BLAST of mRNA_M-pyrifera_M_contig73930.17513.1 vs. uniprot
Match: A0A381W8J8_9ZZZZ (Uncharacterized protein n=1 Tax=marine metagenome TaxID=408172 RepID=A0A381W8J8_9ZZZZ) HSP 1 Score: 246 bits (628), Expect = 2.390e-75 Identity = 151/328 (46.04%), Postives = 198/328 (60.37%), Query Frame = 1 Query: 1 SGKIRMDDGIEIRVRGRLAYYGPQSRMQLLMTLIDPSFTLGQLEIARTQLLAALGAEGILEANRKLQSPVVPLRVVVITSAASAAHADFTHELSSSELPFHLITIDTRVQGPEAVPMLVKAIAAAHAERPDVIAVVRGGGSRTDLMAFDHEDVARAIASASIPIFVGIGHEIDLSVADHVAHLTTKTPTACAAAIVERVRAFVTRVDDAELRLARVTEMQLAQEERRLVT-AGNRIGLLAGGTVERQRSRLDLFDHRTVDASDRFLERQTDQLERLALRTTALDPAITLARGWSITRTAEGTLVRSPADAPPGTALTTTLADGTISST 981 +G + + D + IR+R RL +Y P+ R+QL+M IDP FTLG+L I R QLL L G+L+ N LQ P PLRV ++TS SAAHADF+ EL S L F ++ DTRVQG ++ + + + +PDVIA+VRGGGS DL+AFD E VAR IA IP++ GIGHE+D S+AD VAH KTPTACAAA+VER RAF + V+ ++ R+++ +G R LAG RTV A+ L R + L + R ALDP LARGWSITR +G L+RS +A PG L T +ADGT++ST Sbjct: 86 AGGLALADDLLIRIRARLEFYAPRGRLQLIMDRIDPGFTLGRLAIEREQLLRTLAEAGLLDRNAGLQVPEPPLRVGLVTSIGSAAHADFSTELGHSGLAFTVLERDTRVQGEGVADVIAEGLRVVASYQPDVIALVRGGGSAADLVAFDAEVVARTIAELDIPVWTGIGHEVDRSIADEVAHTAFKTPTACAAALVERGRAFASLVEG--------MRSEIVDRARQVIEHSGQRQADLAG---------------RTVRATRAALARHEEHLAGITGRLRALDPERILARGWSITRLEDGRLLRSVGEANPGDRLATLVADGTVAST 390
BLAST of mRNA_M-pyrifera_M_contig73930.17513.1 vs. uniprot
Match: A0A7Y2IJ44_9ACTN (Exodeoxyribonuclease 7 large subunit n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2IJ44_9ACTN) HSP 1 Score: 246 bits (627), Expect = 8.040e-75 Identity = 152/334 (45.51%), Postives = 208/334 (62.28%), Query Frame = 1 Query: 1 SGKIRMDDGIEIRVRGRLAYYGPQSRMQLLMTLIDPSFTLGQLEIARTQLLAALGAEGILEANRKLQSPVVPLRVVVITSAASAAHADFTHELSSSELPFHLITIDTRVQGPEAVPMLVKAIAAAHAERPDVIAVVRGGGSRTDLMAFDHEDVARAIASASIPIFVGIGHEIDLSVADHVAHLTTKTPTACAAAIVERVRAFVTRVDDAELRL---AR---VTEMQ-LAQEERRLVTAGNRIGLLAGGTVERQRSRLDLFDHRTVDASDRFLERQTDQLERLALRTTALDPAITLARGWSITRTAEGTLVRSPADAPPGTALTTTLADGTISST 981 +G +RM+DGIE+ + G + +Y R+QL+M++IDPS+T+GQL + +L L +G+L N++L PV+PLR+ +ITS SAA ADF HEL S + F + D RVQG EA P +V A+ + + DV+A+VRGGG++TDL+AFD VA AIA P+ VG+GHE+D S+AD A ++TKTPTA A I+++V F RV+ A RL AR VT Q L+Q +RRLV A N A +ER RL + + A+ +LE LR ALDPA+ +ARGWSITRT++G LVRS A G L T L DG ++ST Sbjct: 85 TGAMRMEDGIEVSIAGSVEHYASGGRVQLIMSMIDPSYTIGQLAANKAAVLRRLADDGLLHRNKQLGLPVLPLRIALITSGGSAAQADFMHELDGSGISFSITLFDVRVQGLEAPPTIVSALESVRPGQFDVVALVRGGGAKTDLVAFDDFGVAAAIARCPTPVVVGVGHEVDRSIADETAAVSTKTPTAAAGWILQQVLVFDQRVEVATERLMIAARAQMVTSSQDLSQRQRRLVGAANAATAAAERHLERSVFRLGSTTRQRITAA-------AHELEMKDLRQKALDPALVMARGWSITRTSDGELVRSVAQVSDGEQLLTQLLDGHLAST 411
BLAST of mRNA_M-pyrifera_M_contig73930.17513.1 vs. uniprot
Match: A0A3C2B0X3_9ACTN (Exodeoxyribonuclease 7 large subunit n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C2B0X3_9ACTN) HSP 1 Score: 244 bits (623), Expect = 6.430e-74 Identity = 150/347 (43.23%), Postives = 204/347 (58.79%), Query Frame = 1 Query: 7 KIRMDDGIEIRVRGRLAYYGPQSRMQLLMTLIDPSFTLGQLEIARTQLLAALGAEGILEANRKLQSPVVPLRVVVITSAASAAHADFTHELSSSELPFHLITIDTRVQGPEAVPMLVKAIAA-AHAERPDVIAVVRGGGSRTDLMAFDHEDVARAIASASIPIFVGIGHEIDLSVADHVAHLTTKTPTACAAAIVERVRAFVTRVDDAELRLARVTEMQL----------------------AQEERRLVTAGNRIGLLAGGTVERQRSRLDLFDHRTVDASDRFLERQTDQLERLALRTTALDPAITLARGWSITRTAEGTLVRSPADAPPGTALTTTLADGTISS 978 ++R+ DG+++R+ G L +Y P ++ L M+ IDP FTLG++ + RT+++ L A G+ + N+++ PV PLRV V+TS ASAA ADF HE+ S L F L D RVQG AV + A+ + D + V+RGGGSRT+L FDHE +A AIA+A +P+ G+GHEID SVAD VAHL KTPTACAAA+VERV+ F R + A +AR + + + + RL NR+ A T+ER S L TV + L+ + L+ LA R LDPA T+ARGWSITRTA+G VR+ A+ PG + TT ADGT S Sbjct: 101 RVRLADGLKVRIFGHLDFYAPSGQLGLKMSGIDPRFTLGEMALQRTEVVRRLVASGLYDRNKRVPMPVAPLRVGVVTSVASAAWADFVHEIERSGLGFRLQVCDVRVQGEWAVTEVSAAVRTLGRSPGLDAVVVIRGGGSRTELATFDHEAIATAIATAQVPVLTGLGHEIDRSVADEVAHLALKTPTACAAALVERVQEFQQRAEQAWSAIARRADRSVEVAAAAIADVAHGIRHRVATAVGRSDERLAHRANRVRGEALRTLERADSHLTSAVA-TVGRAPLRLQPEARHLDMLAERVRLLDPATTMARGWSITRTADGRTVRTSAELQPGDLIITTFADGTARS 446
BLAST of mRNA_M-pyrifera_M_contig73930.17513.1 vs. uniprot
Match: A0A7Y2DQ38_9ACTN (Exodeoxyribonuclease 7 large subunit n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2DQ38_9ACTN) HSP 1 Score: 243 bits (620), Expect = 8.240e-74 Identity = 146/334 (43.71%), Postives = 206/334 (61.68%), Query Frame = 1 Query: 1 SGKIRMDDGIEIRVRGRLAYYGPQSRMQLLMTLIDPSFTLGQLEIARTQLLAALGAEGILEANRKLQSPVVPLRVVVITSAASAAHADFTHELSSSELPFHLITIDTRVQGPEAVPMLVKAIAAAHAERPDVIAVVRGGGSRTDLMAFDHEDVARAIASASIPIFVGIGHEIDLSVADHVAHLTTKTPTACAAAIVERVRAFVTRVDDAELRLARVTEMQLAQEE-------RRLVTAGNRIGLLAGGTVERQRSRLDLFDHRTVDASDRFLERQTDQLERLALRTTALDPAITLARGWSITRTAEGTLVRSPADAPPGTALTTTLADGTISST 981 +G +RM+DGIE+ + G + Y P R+Q++M +IDPS+TLG+L +R L L EG+L NR+ P +PLR+ ++TS SAA ADF HELS+S + F + D RVQG +A L +AIAAA D++AVVRGGG++TDL+AFDH +VA A+AS +P+ VG+GHEID S+ D VA ++ KTPTA A I+++V F RV A RLA V + QL + RRLV N++ G + R ++ R A+ + +L+R LR A+DPA +ARGW+ITR ++G ++ S + G A+TT ADG ISST Sbjct: 85 TGAVRMEDGIEVAIGGSIDLYAPAGRVQMIMNVIDPSYTLGRLAESRDDTLKRLAGEGLLTLNRERGLPALPLRIALVTSEGSAAEADFMHELSASGIAFEVSLFDARVQGSDAPATLSRAIAAAGGFDVDIVAVVRGGGAKTDLVAFDHYEVAAAVASCKVPVVVGVGHEIDRSICDEVAAISAKTPTAAAGWIIQQVVGFDQRVAAAGARLALVADDQLTRARQRCDLSTRRLVQGTNQV---LNGALGRHVGAIN----RLRTAATAAVLNAGHRLDRNDLRRRAVDPARVMARGWTITRDSQGEVITSSSQVTDGDAITTQTADGLISST 411
BLAST of mRNA_M-pyrifera_M_contig73930.17513.1 vs. uniprot
Match: UPI001D0FED9A (exodeoxyribonuclease VII large subunit n=1 Tax=Aquihabitans sp. Kera 3 TaxID=2884263 RepID=UPI001D0FED9A) HSP 1 Score: 243 bits (621), Expect = 9.790e-74 Identity = 157/356 (44.10%), Postives = 198/356 (55.62%), Query Frame = 1 Query: 10 IRMDDGIEIRVRGRLAYYGPQSRMQLLMTLIDPSFTLGQLEIARTQLLAALGAEGILEANRKLQSPVVPLRVVVITSAASAAHADFTHELSSSELPFHLITIDTRVQGPEAVPMLVKAIAAAHAERPDVIAVVRGGGSRTDLMAFDHEDVARAIASASIPIFVGIGHEIDLSVADHVAHLTTKTPTACAAAIVERVRAFVTRVDDAELRLARVTEMQLAQEERRLVTAGNRIGLLAGGTVERQRSRLDLFDHRTVDASDRFLERQT---------------------------------DQLERLALRTTALDPAITLARGWSITRTAEGTLVRSPADAPPGTALTTTLADGTISS 978 IRM+DGI +R+ GRLA Y +S +QL+M IDP+FTLG L R +LLAAL EG+L N + PVVPL V ++TS SAAHAD HEL SS + F + T D R QG +A +V A+ A A R DV+ +VRGGG+ TDL+AFDHE VARAIA A + +F GIGHE D +VAD VAH KTPTA A A+V VR RV D + +L + E RL G+R G A ++R+ +DA DR ++R T +L+ LA A DPA L RGWS+T TA+G LVRSPAD G L T +A G + S Sbjct: 76 IRMNDGIRVRIGGRLATYPARSTLQLVMDRIDPAFTLGLLGQERVRLLAALDEEGLLRQNAAVAVPVVPLHVGLVTSVGSAAHADALHELESSGVGFRVSTFDARTQGADAPASVVAALRTAAAHRVDVVLIVRGGGAATDLVAFDHEQVARAIAGAPVAVFTGIGHETDRTVADEVAHTAHKTPTAAAGALVRAVRDAERRVVDDWAAVRAGVAGRLVRAEHRLARVGHRAGATAVHRLDRR-----------MDALDRDVQRVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRLDVLAANVAAADPARALRRGWSVTHTADGRLVRSPADVVAGDELVTRVAGGAVRS 420
BLAST of mRNA_M-pyrifera_M_contig73930.17513.1 vs. uniprot
Match: A0A3S0BQG3_9ACTN (Exodeoxyribonuclease 7 large subunit n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A3S0BQG3_9ACTN) HSP 1 Score: 243 bits (620), Expect = 1.270e-73 Identity = 151/323 (46.75%), Postives = 194/323 (60.06%), Query Frame = 1 Query: 10 IRMDDGIEIRVRGRLAYYGPQSRMQLLMTLIDPSFTLGQLEIARTQLLAALGAEGILEANRKLQSPVVPLRVVVITSAASAAHADFTHELSSSELPFHLITIDTRVQGPEAVPMLVKAIAAAHAERPDVIAVVRGGGSRTDLMAFDHEDVARAIASASIPIFVGIGHEIDLSVADHVAHLTTKTPTACAAAIVERVRAFVTRVDDAELRLARVTEMQLAQEERRLVTAGNRIGLLAGGTVERQRSRLDLFDHRTVDASDRFLERQTDQLERLALRTTALDPAITLARGWSITRTAEGTLVRSPADAPPGTALTTTLADGTISS 978 IRM DG+ IR+ GRL Y +S +QLLM IDP+FTLG L R +L+AAL EG+L AN ++ P V LRV ++TS SAAHAD HEL SS + FH+ D R QG +A + +AI AA A +V+ +VRGGG+ TDL+AFD E VARAIA++ + + GIGHE D SVAD VAH KTPTA A +V VR R+ D T L + E RL R G A ++R LD R + R +ER + E +A+ T ALDPA+ + RGWSITR +G+LVRS + L TTLADGT++S Sbjct: 91 IRMTDGLRIRIGGRLGTYAARSSLQLLMDRIDPAFTLGLLGADRARLIAALTREGLLRANAEVHLPSVALRVGLVTSVGSAAHADALHELESSGIGFHVQVFDARTQGADAPGSITRAIRAAVAHGVEVVLLVRGGGATTDLIAFDDEAVARAIATSDVAVITGIGHETDRSVADEVAHTAQKTPTAAAQLLVRTVRDAERRILDRWAAARAGTHGGLDRAEVRLDRIRERTGARAVARLDRSTLELDHRVRRVHAGARRRIERADARTELIAVSTAALDPALAMRRGWSITRGTDGSLVRSVDELSTNQELITTLADGTVTS 413 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig73930.17513.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig73930.17513.1 >prot_M-pyrifera_M_contig73930.17513.1 ID=prot_M-pyrifera_M_contig73930.17513.1|Name=mRNA_M-pyrifera_M_contig73930.17513.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=334bp MDDGIEIRVRGRLAYYGPQSRMQLLMTLIDPSFTLGQLEIARTQLLAALGback to top mRNA from alignment at M-pyrifera_M_contig73930:2..1018+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig73930.17513.1 ID=mRNA_M-pyrifera_M_contig73930.17513.1|Name=mRNA_M-pyrifera_M_contig73930.17513.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1017bp|location=Sequence derived from alignment at M-pyrifera_M_contig73930:2..1018+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig73930:2..1018+ >mRNA_M-pyrifera_M_contig73930.17513.1 ID=mRNA_M-pyrifera_M_contig73930.17513.1|Name=mRNA_M-pyrifera_M_contig73930.17513.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2004bp|location=Sequence derived from alignment at M-pyrifera_M_contig73930:2..1018+ (Macrocystis pyrifera P11B4 male)back to top |