mRNA_M-pyrifera_M_contig73892.17502.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig73892.17502.1
Unique NamemRNA_M-pyrifera_M_contig73892.17502.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig73892.17502.1 vs. uniprot
Match: V9FYI1_PHYPR (Cytochrome b5 heme-binding domain-containing protein n=15 Tax=Phytophthora TaxID=4783 RepID=V9FYI1_PHYPR)

HSP 1 Score: 267 bits (683), Expect = 1.600e-83
Identity = 134/274 (48.91%), Postives = 185/274 (67.52%), Query Frame = 1
Query:    4 AGSGEIRKAGMEFTWEEVAEHNTADSAWVISNGKVYDITDWLPRHPGGSEILLLAAGRDVTDLLPSYHPFALEHAEKALASYEIGKLVGRPEFVTYKPDSGFYKTLRERVGQYFAEEGLDPKDPTGMVVRMVPVFLGFWATFWLMHQADSFPLWARLGFAVLFGLFQAFPLLHSMHDATHVALGHSETWWKWWGRVPMELMAGSSVVAWHSQHVVGHHVYTNVYLADPDMPAEGET-MRVFVPRQFWVWTAKFQHVYMPLLYSLLAIKMRVDDV 822
            A +    KA   +TW++VA+HNTA SAWVI  G VYD+T+W  RHPGG E++LL AGR+ TD   SYHPF+   A+K LA Y IGKLVG  EF TYKPD+GFY+   +RV QYF +  LDP+ P   + RM+ V +    ++  M+Q  S  ++A   +  LFG+ QA PLLH MHDA+H A+  S T W+  GR+ M+ +AG+++++W +QHVVGHH+YTNV  ADPD+P + ++ +R  V RQ  +   KFQH+Y+P LY +L +K RV D+
Sbjct:   23 AAAAAADKAAATYTWQDVAKHNTAKSAWVIIRGIVYDVTEWADRHPGGRELVLLHAGRECTDTFDSYHPFS-NRADKILAKYAIGKLVGASEFPTYKPDTGFYRECCDRVNQYFKDNNLDPRSPYSGLWRMLIVAILGAVSYVGMNQMLSDNIYAHYAWGALFGVCQALPLLHVMHDASHAAITSSPTGWRLIGRLAMDWVAGANMLSWLNQHVVGHHIYTNVAGADPDLPVDFKSDVRRIVYRQVLLPIYKFQHIYLPPLYGVLGLKFRVQDI 295          
BLAST of mRNA_M-pyrifera_M_contig73892.17502.1 vs. uniprot
Match: A0A2D4BMS9_PYTIN (Delta 5 fatty acid desaturase putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BMS9_PYTIN)

HSP 1 Score: 277 bits (709), Expect = 3.040e-83
Identity = 139/264 (52.65%), Postives = 177/264 (67.05%), Query Frame = 1
Query:   37 EFTWEEVAEHNTADSAWVISNGKVYDITDWLPRHPGGSEILLLAAGRDVTDLLPSYHPFALEHAEKALASYEIGKLVGRPEFVTYKPDSGFYKTLRERVGQYFAEEGLDPKDPTGMVVRMVPVFLGFWATFWLMH-QADSFPLWARLGFAVLFGLFQAFPLLHSMHDATHVALGHSETWWKWWGRVPMELMAGSSVVAWHSQHVVGHHVYTNVYLADPDMPAEGET-MRVFVPRQFWVWTAKFQHVYMPLLYSLLAIKMRVDDV 822
            EFTW+EVA+HNT DSAWVI    VYD+T+W  RHPGG E++LL AGR+ TD   SYHPF+   AEK LA Y IGKLVG  EF TYKPD+GFYK   ++VG+YF +  LDPK+P   + RM  VF     +F  M+ Q    P WA   + V+FG+ QA PLLH MHD++H A  +S TWW   GR  M+  AG S+V+W +QH+VGHH+YTNV  ADPD+P   ++ +R  V RQ      KFQH+Y+P LY +L +K R+ DV
Sbjct:  495 EFTWQEVAQHNTGDSAWVIIRNVVYDVTEWADRHPGGRELILLHAGRECTDTFDSYHPFS-NRAEKILAKYAIGKLVGETEFPTYKPDTGFYKECAQKVGEYFKKNNLDPKNPLAGLWRMAFVFAVAAVSFLGMNGQLPVSPTWAMYAWGVVFGVCQALPLLHVMHDSSHAACSNSPTWWYIIGRGAMDWFAGGSMVSWLNQHIVGHHIYTNVAGADPDLPVNFKSDVRRIVERQVLRPIYKFQHIYLPPLYGVLGLKFRIQDV 757          
BLAST of mRNA_M-pyrifera_M_contig73892.17502.1 vs. uniprot
Match: Q944W3_GLOIR (Delta-5 fatty acid desaturase n=1 Tax=Globisporangium irregulare TaxID=36331 RepID=Q944W3_GLOIR)

HSP 1 Score: 265 bits (678), Expect = 4.420e-83
Identity = 134/265 (50.57%), Postives = 179/265 (67.55%), Query Frame = 1
Query:   31 GMEFTWEEVAEHNTADSAWVISNGKVYDITDWLPRHPGGSEILLLAAGRDVTDLLPSYHPFALEHAEKALASYEIGKLVGRPEFVTYKPDSGFYKTLRERVGQYFAEEGLDPKDPTGMVVRMVPVFLGFWATFWLMHQADSFPLWARLGFAVLFGLFQAFPLLHSMHDATHVALGHSETWWKWWGRVPMELMAGSSVVAWHSQHVVGHHVYTNVYLADPDMPAEGET-MRVFVPRQFWVWTAKFQHVYMPLLYSLLAIKMRVDDV 822
            G  FTW+EVA+HNTA SAWVI  G+VYD+T+W  +HPGGSE+++L +GR+ TD   SYHPF+   A+K LA Y+IGKLVG  EF  +KPDSGFYK   ERV +YF    LDPK     + RMV VF      +  M++     ++A+  + V+FG+FQA PLLH MHD++H A   S   W+  GR  M+  AG+S+V+W +QHVVGHH+YTNV  ADPD+P + E+ +R  V RQ  +   KFQH+Y+P LY +L +K R+ DV
Sbjct:    6 GKTFTWQEVAKHNTAKSAWVIIRGEVYDVTEWADKHPGGSELIVLHSGRECTDTFYSYHPFS-NRADKILAKYKIGKLVGGYEFPVFKPDSGFYKECSERVAEYFKTNNLDPKAAFAGLWRMVFVFAVAALAYMGMNELIPGNVYAQYAWGVVFGVFQALPLLHVMHDSSHAACSSSPAMWQIIGRGVMDWFAGASMVSWLNQHVVGHHIYTNVAGADPDLPVDFESDVRRIVHRQVLLPIYKFQHIYLPPLYGVLGLKFRIQDV 269          
BLAST of mRNA_M-pyrifera_M_contig73892.17502.1 vs. uniprot
Match: Q8H0N8_PHYME (Delta 5 fatty acid desaturase n=1 Tax=Phytophthora megasperma TaxID=4788 RepID=Q8H0N8_PHYME)

HSP 1 Score: 265 bits (678), Expect = 7.860e-83
Identity = 134/275 (48.73%), Postives = 183/275 (66.55%), Query Frame = 1
Query:    1 RAGSGEIRKAGMEFTWEEVAEHNTADSAWVISNGKVYDITDWLPRHPGGSEILLLAAGRDVTDLLPSYHPFALEHAEKALASYEIGKLVGRPEFVTYKPDSGFYKTLRERVGQYFAEEGLDPKDPTGMVVRMVPVFLGFWATFWLMHQADSFPLWARLGFAVLFGLFQAFPLLHSMHDATHVALGHSETWWKWWGRVPMELMAGSSVVAWHSQHVVGHHVYTNVYLADPDMPAEGET-MRVFVPRQFWVWTAKFQHVYMPLLYSLLAIKMRVDDV 822
            R G+    K    FTW++VA+HNTA SAWV   G VYD+T+W  RHPGG E++LL +GR+ TD   SYHPF+ + A+K LA Y IGKLVG  EF TYKPD+GFYK   +RV QYF +  LDP+ P   + RM+ V +     +  M+Q     ++A   +  LFG+ QA PLLH MHDA+H A+  S T W+  GR+ M+ +AG+++V+W +QHVVGHH+YTNV  ADPD+P + ++ +R  V RQ  +   K+QH+Y+P LY +L +K RV DV
Sbjct:   17 RKGAAAASKDTTTFTWQDVAKHNTAKSAWVTIRGVVYDVTEWADRHPGGRELVLLHSGRECTDTFDSYHPFS-DRADKILAKYAIGKLVGGSEFPTYKPDTGFYKECCDRVNQYFKDNKLDPRSPYSGLWRMILVAIVGAVAYMGMNQLLPGNIYAHYAWGALFGVCQALPLLHVMHDASHAAITSSPTGWRLIGRLAMDWVAGANMVSWLNQHVVGHHIYTNVAGADPDLPVDFKSDVRRIVYRQVLLPIYKYQHLYLPPLYGVLGLKFRVQDV 290          
BLAST of mRNA_M-pyrifera_M_contig73892.17502.1 vs. uniprot
Match: A0A662XFS8_9STRA (Cytochrome b5 heme-binding domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XFS8_9STRA)

HSP 1 Score: 263 bits (672), Expect = 3.320e-82
Identity = 135/277 (48.74%), Postives = 184/277 (66.43%), Query Frame = 1
Query:    1 RAGSGEIRKAGME--FTWEEVAEHNTADSAWVISNGKVYDITDWLPRHPGGSEILLLAAGRDVTDLLPSYHPFALEHAEKALASYEIGKLVGRPEFVTYKPDSGFYKTLRERVGQYFAEEGLDPKDPTGMVVRMVPVFLGFWATFWLMHQADSFPLWARLGFAVLFGLFQAFPLLHSMHDATHVALGHSETWWKWWGRVPMELMAGSSVVAWHSQHVVGHHVYTNVYLADPDMPAEGET-MRVFVPRQFWVWTAKFQHVYMPLLYSLLAIKMRVDDV 822
            R G+      G +  +TW+EVAEHNTA SAWVI  G VYD+T+W  +HPGGSE++LL +GR+ +D   SYHPF+   A+K LA Y +GKLVG  EF TYKPD+GFYK   ERV QYF +   DPK     + RM+ V       +  M+Q     ++A+    V+FG FQA PLLH MHDA+H A+ +S T W + GR+ M+ +AG+++V+W +QHVVGHH+YTNV  ADPD+P + ++ +R  V RQ  +   KFQH+Y+P LY +L +K RV D+
Sbjct:  154 RKGAARAAATGADATYTWQEVAEHNTAKSAWVIIRGVVYDVTEWADKHPGGSELILLHSGRECSDTFDSYHPFSAR-ADKILAKYAVGKLVGGSEFPTYKPDTGFYKECCERVHQYFIDTKKDPKSGFAGLWRMIFVLSVAAVAYMGMNQLIPGNVYAQYACGVVFGAFQALPLLHVMHDASHAAITNSPTGWIFIGRLAMDWLAGANMVSWLNQHVVGHHIYTNVAGADPDLPVDFKSDVRRIVYRQVLLPVYKFQHLYLPPLYGVLGLKFRVQDI 429          
BLAST of mRNA_M-pyrifera_M_contig73892.17502.1 vs. uniprot
Match: H3G8F3_PHYRM (Cytochrome b5 heme-binding domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=H3G8F3_PHYRM)

HSP 1 Score: 264 bits (674), Expect = 3.490e-82
Identity = 132/267 (49.44%), Postives = 180/267 (67.42%), Query Frame = 1
Query:   25 KAGMEFTWEEVAEHNTADSAWVISNGKVYDITDWLPRHPGGSEILLLAAGRDVTDLLPSYHPFALEHAEKALASYEIGKLVGRPEFVTYKPDSGFYKTLRERVGQYFAEEGLDPKDPTGMVVRMVPVFLGFWATFWLMHQADSFPLWARLGFAVLFGLFQAFPLLHSMHDATHVALGHSETWWKWWGRVPMELMAGSSVVAWHSQHVVGHHVYTNVYLADPDMPAEGET-MRVFVPRQFWVWTAKFQHVYMPLLYSLLAIKMRVDDV 822
            K    +TW++VA+HNTA SAWVI  G VYD+T+W  RHPGG E++LL +GR+ TD   SYHPF+   A+K L  Y +GKLVG  EF TYKPD+GFYK  RERV QYF +  LDP++P   + RM+ V +     +  M+Q     ++A   +  LFG+ QA PLLH MHDA+H A+  S T W   GR+ M+ +AG+++V+W +QHVVGHH+YTNV  ADPD+P + ++ +R  V RQ  +   KFQH+Y+P LY +L +K RV D+
Sbjct:   29 KDSATYTWQDVAKHNTAQSAWVIIRGVVYDVTEWADRHPGGRELVLLHSGRECTDTFDSYHPFS-SRADKILTKYAVGKLVGGSEFPTYKPDTGFYKECRERVHQYFKDNKLDPRNPYSGLWRMLLVAIVAVFAYMGMNQLLPGNIYAHYAWGALFGVCQALPLLHVMHDASHAAITSSPTGWTLIGRLAMDWVAGANMVSWLNQHVVGHHIYTNVAGADPDLPVDFKSDVRRIVYRQVLLPIYKFQHLYLPPLYGVLGLKFRVQDI 294          
BLAST of mRNA_M-pyrifera_M_contig73892.17502.1 vs. uniprot
Match: A0A835Z094_9STRA (Fatty acid desaturase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z094_9STRA)

HSP 1 Score: 264 bits (674), Expect = 3.580e-82
Identity = 131/264 (49.62%), Postives = 172/264 (65.15%), Query Frame = 1
Query:   40 FTWEEVAEHNTADSAWVISNGKVYDITDWLPRHPGGSEILLLAAGRDVTDLLPSYHPFALEHAEKALASYEIGKLVGRPEFVTYKPDSGFYKTLRERVGQYFAEEGLDPKDPTGMVVRMVPVFLGFWATFWLMHQ--ADSFPLWARLGFAVLFGLFQAFPLLHSMHDATHVALGHSETWWKWWGRVPMELMAGSSVVAWHSQHVVGHHVYTNVYLADPDMPA--EGETMRVFVPRQFWVWTAKFQHVYMPLLYSLLAIKMRVDD 819
            +TW+EVA+HNTA SAWVI   KVYD+T W+  HPGG E+LLL AGRD T    SYHPF  +   K L  +E+G  V   EF  Y+PDSGFY T+ +R+  YF E  L+PK P   V RM+ V     A F   +   A + P WAR+  A  FG+ QA PLLH MHD++H A G+S+ WW + GR+ M+  AG+++ +WH QHVVGHH+YTNVY ADPD+P   EG+  R+ V RQ W    ++QH+Y+P LY +L +K R+ D
Sbjct:   34 YTWQEVAKHNTAHSAWVIVGSKVYDLTSWVDNHPGGREVLLLMAGRDATAAFESYHPFT-DKPRKILGKFEVGA-VSNHEFPQYRPDSGFYSTMNKRLAAYFKENKLNPKSPWPGVWRMILVSACAVACFLACNNFWAGALPPWARVLAAAAFGVLQAMPLLHVMHDSSHTAFGNSQAWWSYGGRLFMDFYAGANMTSWHYQHVVGHHIYTNVYQADPDLPVADEGDPRRL-VDRQTWKPLYQYQHLYLPPLYGILGLKFRIQD 294          
BLAST of mRNA_M-pyrifera_M_contig73892.17502.1 vs. uniprot
Match: A0A1S7C7Q1_9STRA (Delta-5 fatty acid desaturase n=1 Tax=Nannochloropsis oceanica TaxID=145522 RepID=A0A1S7C7Q1_9STRA)

HSP 1 Score: 264 bits (674), Expect = 1.140e-81
Identity = 138/274 (50.36%), Postives = 182/274 (66.42%), Query Frame = 1
Query:   31 GMEFTWEEVAEHNTADSAWVISNGKVYDITDWLPRHPGGSEILLLAAGRDVTDLLPSYHPFALEHAEKALASYEIGKLVGRPEFVTYKPDS-GFYKTLRERVGQYFAEEGLDPKDPTGMVVRMVPVFLGFWATF-----WLMHQADSFPLW-ARLGFAVLFGLFQAFPLLHSMHDATHVALGHSETWWKWWGRVPMELMAGSSVVAWHSQHVVGHHVYTNVYLADPDMP--AEGETMRVFVPRQFWVWTAKFQHVYMPLLYSLLAIKMRVDDVL 825
            G  +TWEEVAEHNT  S WV   GKVYDI+ W+  HPGG EILLLAAGRD+T    SYHPF  E   + L  +EIG  V   EF  YKPD+ GFYKTL  RVG YF +E L+PKDP   + RM+ V +   A+F     W+  +      W AR   AV+FG+ QA PLLH MHD++H+A G++E WW+  GR+ M+  AG+++ +WH+QHV+GHH+YTNV++ADP +P  + G+  R+ V +Q W    K+QH+Y+P LY +L IK RV DV+
Sbjct:   57 GKTYTWEEVAEHNTEKSLWVTVRGKVYDISSWVNNHPGGKEILLLAAGRDITYAFDSYHPFT-EKPTQVLGKFEIGT-VSSHEFPQYKPDTRGFYKTLCTRVGDYFKQEKLNPKDPFPGIWRMLLVAMVAVASFMVCNGWVGLEGGVLAGWGARFVAAVVFGVCQALPLLHVMHDSSHLAFGNTERWWQMGGRLAMDFFAGANMTSWHNQHVIGHHIYTNVFMADPALPDKSAGDPRRL-VKKQAWEGMYKWQHLYLPPLYGILGIKFRVQDVM 327          
BLAST of mRNA_M-pyrifera_M_contig73892.17502.1 vs. uniprot
Match: K3X4E3_GLOUD (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X4E3_GLOUD)

HSP 1 Score: 261 bits (667), Expect = 3.500e-81
Identity = 132/268 (49.25%), Postives = 176/268 (65.67%), Query Frame = 1
Query:   25 KAGMEFTWEEVAEHNTADSAWVISNGKVYDITDWLPRHPGGSEILLLAAGRDVTDLLPSYHPFALEHAEKALASYEIGKLVGRPEFVTYKPDSGFYKTLRERVGQYFAEEGLDPKDPTGMVVRMVPVFLGFWATFWLMHQADSFPLWARLGFAVLFGLFQAFPLLHSMHDATHVALGHSETWWKWWGRVPMELMAGSSVVAWHSQHVVGHHVYTNVYLADPDMPAE--GETMRVFVPRQFWVWTAKFQHVYMPLLYSLLAIKMRVDDV 822
            K+  EFTW+EVA+HNT  SAWVI  G+VYD+T+W  +HPGG E++LL +GR+ TD   SYHPF+   A+K L  Y++GKLVG  EF  +KPDSGFYK   ERV +YF    LDPK       RMV VF      +  M++     +  +  +AV+FG+FQA PLLH MHD++H A   S   W+  GR  M+  AG+S+V+W +QHVVGHH+YTNV  ADPD+P +  G+  R+ V RQ  +   KFQH+Y+P LY +L +K R+ DV
Sbjct:   25 KSAAEFTWQEVAKHNTGKSAWVIIRGEVYDVTEWADKHPGGRELILLHSGRECTDTFESYHPFS-NRADKILGKYKVGKLVGGYEFPVFKPDSGFYKECSERVAEYFKTNNLDPKAGFAGFWRMVFVFAVAALAYMGMNELIPTNICLQYAWAVVFGVFQALPLLHVMHDSSHAACSSSPVMWRVIGRGVMDWFAGASMVSWLNQHVVGHHIYTNVAGADPDLPVDFKGDVRRI-VERQVLLPMYKFQHIYLPPLYGVLGLKFRIQDV 290          
BLAST of mRNA_M-pyrifera_M_contig73892.17502.1 vs. uniprot
Match: A0A3M6VE99_9STRA (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VE99_9STRA)

HSP 1 Score: 261 bits (667), Expect = 4.010e-81
Identity = 131/268 (48.88%), Postives = 180/268 (67.16%), Query Frame = 1
Query:   25 KAGMEFTWEEVAEHNTADSAWVISNGKVYDITDWLPRHPGGSEILLLAAGRDVTDLLPSYHPFALEHAEKALASYEIGKLVGRPEFVTYKPDSGFYKTLRERVGQYFAEEGLDPKDPTGMVVRMVPVFLGFWATFWLMHQADSFPLWARLGFAVLFGLFQAFPLLHSMHDATHVALGHSETWWKWWGRVPMELMAGSSVVAWHSQHVVGHHVYTNVYLADPDMPAEGET-MRVFVPRQFWVWTAKFQHVYMPLLYSLLAIKMRVDDVL 825
            K    +TW++VA+HNTA SAWVI  G VYD+T+W  RHPGG E++LL +GR+ TD   SYHPF+ + A+K LA Y IGKL+G  EF  YKPD+GFYK   +RV +YF +  LDP++P   + RM  V +     F  M+Q  S  ++A   +  +FG+ QA PLLH MHDA+H A+  S T W+  GR  M+ + G+++V+W +QHVVGHHVYTNV  ADPD+P + ++ +R  V RQ  +   KFQH+Y+P LY +L +K RV D+L
Sbjct:   29 KITASYTWQDVAKHNTAKSAWVIIRGIVYDVTEWADRHPGGRELVLLHSGRECTDTFKSYHPFS-DRADKILAKYAIGKLIGGSEFPMYKPDTGFYKECCDRVNEYFKDNKLDPRNPYSGLWRMFLVAIVGVVAFMGMNQLLSDNIYAHYAWGAVFGVCQALPLLHVMHDASHAAITSSPTGWRLIGRFVMDWVTGANMVSWLNQHVVGHHVYTNVPGADPDLPVDFKSDVRRIVYRQMMLPIYKFQHIYLPPLYGVLGLKFRVQDIL 295          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig73892.17502.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
V9FYI1_PHYPR1.600e-8348.91Cytochrome b5 heme-binding domain-containing prote... [more]
A0A2D4BMS9_PYTIN3.040e-8352.65Delta 5 fatty acid desaturase putative n=1 Tax=Pyt... [more]
Q944W3_GLOIR4.420e-8350.57Delta-5 fatty acid desaturase n=1 Tax=Globisporang... [more]
Q8H0N8_PHYME7.860e-8348.73Delta 5 fatty acid desaturase n=1 Tax=Phytophthora... [more]
A0A662XFS8_9STRA3.320e-8248.74Cytochrome b5 heme-binding domain-containing prote... [more]
H3G8F3_PHYRM3.490e-8249.44Cytochrome b5 heme-binding domain-containing prote... [more]
A0A835Z094_9STRA3.580e-8249.62Fatty acid desaturase n=1 Tax=Tribonema minus TaxI... [more]
A0A1S7C7Q1_9STRA1.140e-8150.36Delta-5 fatty acid desaturase n=1 Tax=Nannochlorop... [more]
K3X4E3_GLOUD3.500e-8149.25Cytochrome b5 heme-binding domain-containing prote... [more]
A0A3M6VE99_9STRA4.010e-8148.88Cytochrome b5 heme-binding domain-containing prote... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig73892contigM-pyrifera_M_contig73892:94..1089 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score268.9
Seed ortholog evalue2.7e-69
Seed eggNOG ortholog36331.EPrPI00000019919
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006636,GO:0006950,GO:0007275,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0016020,GO:0016053,GO:0016491,GO:0019752,GO:0032501,GO:0032502,GO:0032787,GO:0033559,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0048856,GO:0050896,GO:0055114,GO:0071704,GO:0071944,GO:0072330,GO:1901576
EggNOG free text desc.Delta-5 fatty acid desaturase. Source PGD
EggNOG OGs1MCZA@121069,COG3239@1,KOG4232@2759
COG Functional cat.I
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
Exons2
Model size825
Cds size825
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816636.5739505-CDS-M-pyrifera_M_contig73892:93..2141622816636.5739505-CDS-M-pyrifera_M_contig73892:93..214Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig73892 94..214 +
1692278090.9344373-CDS-M-pyrifera_M_contig73892:93..2141692278090.9344373-CDS-M-pyrifera_M_contig73892:93..214Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig73892 94..214 +
1622816636.5862908-CDS-M-pyrifera_M_contig73892:385..10891622816636.5862908-CDS-M-pyrifera_M_contig73892:385..1089Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig73892 386..1089 +
1692278090.9469695-CDS-M-pyrifera_M_contig73892:385..10891692278090.9469695-CDS-M-pyrifera_M_contig73892:385..1089Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig73892 386..1089 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig73892.17502.1prot_M-pyrifera_M_contig73892.17502.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig73892 94..1089 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig73892.17502.1

>prot_M-pyrifera_M_contig73892.17502.1 ID=prot_M-pyrifera_M_contig73892.17502.1|Name=mRNA_M-pyrifera_M_contig73892.17502.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=275bp
RAGSGEIRKAGMEFTWEEVAEHNTADSAWVISNGKVYDITDWLPRHPGGS
EILLLAAGRDVTDLLPSYHPFALEHAEKALASYEIGKLVGRPEFVTYKPD
SGFYKTLRERVGQYFAEEGLDPKDPTGMVVRMVPVFLGFWATFWLMHQAD
SFPLWARLGFAVLFGLFQAFPLLHSMHDATHVALGHSETWWKWWGRVPME
LMAGSSVVAWHSQHVVGHHVYTNVYLADPDMPAEGETMRVFVPRQFWVWT
AKFQHVYMPLLYSLLAIKMRVDDVL
back to top

mRNA from alignment at M-pyrifera_M_contig73892:94..1089+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig73892.17502.1 ID=mRNA_M-pyrifera_M_contig73892.17502.1|Name=mRNA_M-pyrifera_M_contig73892.17502.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=996bp|location=Sequence derived from alignment at M-pyrifera_M_contig73892:94..1089+ (Macrocystis pyrifera P11B4 male)
CGGGCTGGGTCTGGGGAGATCCGCAAAGCCGGGATGGAGTTCACCTGGGA GGAGGTGGCAGAACACAACACGGCGGACAGCGCGTGGGTGATTTCCAACG GGAAGGTTTACGACATCACTGGTACGCAAGGAAGGGGGTTGTTTTTTGGG GTTTGGGGCGGCTGGTGTGTTTTTTGGTGTTGTGTAGTGTGTGTTTGTGT GGGTGTGGGGTGTGTGTTGTGCGGTGGTGTTTGGGATTTCTGCGAAACGG CGGTTTTGCAAGGTTTGAGGTTTGTTTTTTCGGCGTTTGCAGACTGGCTT CCGCGGCACCCTGGCGGTTCCGAGATCCTTCTGTTGGCTGCGGGCCGGGA CGTGACGGACCTGTTGCCGTCGTACCACCCGTTCGCGCTGGAGCACGCGG AGAAGGCTCTGGCGTCGTACGAGATCGGCAAGCTGGTGGGCCGGCCCGAG TTTGTGACGTACAAGCCGGACTCTGGGTTCTACAAGACGCTGCGGGAGCG CGTGGGGCAGTACTTTGCGGAGGAGGGCTTGGATCCGAAGGACCCGACTG GGATGGTGGTTCGCATGGTCCCGGTGTTTTTGGGTTTCTGGGCCACGTTC TGGCTGATGCACCAGGCCGACTCGTTCCCGCTGTGGGCGCGGCTGGGGTT TGCGGTGCTTTTTGGACTCTTCCAGGCCTTCCCGCTGCTGCACTCGATGC ATGATGCCACCCATGTGGCTCTCGGCCATTCGGAGACGTGGTGGAAGTGG TGGGGCAGGGTGCCCATGGAGCTCATGGCTGGCAGCTCCGTGGTGGCCTG GCATTCGCAGCACGTGGTGGGACACCACGTGTACACCAACGTGTACCTCG CTGATCCCGACATGCCCGCTGAGGGCGAAACCATGCGTGTGTTTGTGCCC CGGCAATTCTGGGTGTGGACTGCAAAGTTCCAGCACGTCTACATGCCCCT CCTCTACTCCCTGCTGGCCATCAAAATGCGAGTCGACGACGTCCTG
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig73892:94..1089+

>mRNA_M-pyrifera_M_contig73892.17502.1 ID=mRNA_M-pyrifera_M_contig73892.17502.1|Name=mRNA_M-pyrifera_M_contig73892.17502.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1650bp|location=Sequence derived from alignment at M-pyrifera_M_contig73892:94..1089+ (Macrocystis pyrifera P11B4 male)
CGGGCTGGGTCTGGGGAGATCCGCAAAGCCGGGATGGAGTTCACCTGGGA
GGAGGTGGCAGAACACAACACGGCGGACAGCGCGTGGGTGATTTCCAACG
GGAAGGTTTACGACATCACTGCGGGCTGGGTCTGGGGAGATCCGCAAAGC
CGGGATGGAGTTCACCTGGGAGGAGGTGGCAGAACACAACACGGCGGACA
GCGCGTGGGTGATTTCCAACGGGAAGGTTTACGACATCACTGACTGGCTT
CCGCGGCACCCTGGCGGTTCCGAGATCCTTCTGTTGGCTGCGGGCCGGGA
CGTGACGGACCTGTTGCCGTCGTACCACCCGTTCGCGCTGGAGCACGCGG
AGAAGGCTCTGGCGTCGTACGAGATCGGCAAGCTGGTGGGCCGGCCCGAG
TTTGTGACGTACAAGCCGGACTCTGGGTTCTACAAGACGCTGCGGGAGCG
CGTGGGGCAGTACTTTGCGGAGGAGGGCTTGGATCCGAAGGACCCGACTG
GGATGGTGGTTCGCATGGTCCCGGTGTTTTTGGGTTTCTGGGCCACGTTC
TGGCTGATGCACCAGGCCGACTCGTTCCCGCTGTGGGCGCGGCTGGGGTT
TGCGGTGCTTTTTGGACTCTTCCAGGCCTTCCCGCTGCTGCACTCGATGC
ATGATGCCACCCATGTGGCTCTCGGCCATTCGGAGACGTGGTGGAAGTGG
TGGGGCAGGGTGCCCATGGAGCTCATGGCTGGCAGCTCCGTGGTGGCCTG
GCATTCGCAGCACGTGGTGGGACACCACGTGTACACCAACGTGTACCTCG
CTGATCCCGACATGCCCGCTGAGGGCGAAACCATGCGTGTGTTTGTGCCC
CGGCAATTCTGGGTGTGGACTGCAAAGTTCCAGCACGTCTACATGCCCCT
CCTCTACTCCCTGCTGGCCATCAAAATGCGAGTCGACGACGTCCTGACTG
GCTTCCGCGGCACCCTGGCGGTTCCGAGATCCTTCTGTTGGCTGCGGGCC
GGGACGTGACGGACCTGTTGCCGTCGTACCACCCGTTCGCGCTGGAGCAC
GCGGAGAAGGCTCTGGCGTCGTACGAGATCGGCAAGCTGGTGGGCCGGCC
CGAGTTTGTGACGTACAAGCCGGACTCTGGGTTCTACAAGACGCTGCGGG
AGCGCGTGGGGCAGTACTTTGCGGAGGAGGGCTTGGATCCGAAGGACCCG
ACTGGGATGGTGGTTCGCATGGTCCCGGTGTTTTTGGGTTTCTGGGCCAC
GTTCTGGCTGATGCACCAGGCCGACTCGTTCCCGCTGTGGGCGCGGCTGG
GGTTTGCGGTGCTTTTTGGACTCTTCCAGGCCTTCCCGCTGCTGCACTCG
ATGCATGATGCCACCCATGTGGCTCTCGGCCATTCGGAGACGTGGTGGAA
GTGGTGGGGCAGGGTGCCCATGGAGCTCATGGCTGGCAGCTCCGTGGTGG
CCTGGCATTCGCAGCACGTGGTGGGACACCACGTGTACACCAACGTGTAC
CTCGCTGATCCCGACATGCCCGCTGAGGGCGAAACCATGCGTGTGTTTGT
GCCCCGGCAATTCTGGGTGTGGACTGCAAAGTTCCAGCACGTCTACATGC
CCCTCCTCTACTCCCTGCTGGCCATCAAAATGCGAGTCGACGACGTCCTG
back to top