mRNA_M-pyrifera_M_contig73661.17455.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig73661.17455.1
Unique NamemRNA_M-pyrifera_M_contig73661.17455.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig73661.17455.1 vs. uniprot
Match: A0A7S1CLV3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CLV3_9STRA)

HSP 1 Score: 248 bits (634), Expect = 1.260e-74
Identity = 134/263 (50.95%), Postives = 176/263 (66.92%), Query Frame = 1
Query:   94 LRVHPWLYHRLLPFQRTSLRWLWELHCQGVGGILGDEMGLGKTVQLSAFLWSLFRSGRRELRLPVLLVCPATLLSHWQGELGEWAPHLRVVVLHSSGEGVGRRGIGVGGVIRVAQRKRGSVVLTTYSGLKANIGVLEREQWSYAVLDEGHRIRNPAIAVARAAKRIQADHCIILTGTVVQNSLRELWALLDFAVPGRLGSKASFEAHFVRPIVAGGWKGASPTAVAVAFERAIALRRLVAGFLLRRRKKEVATQLPSKEDKVL 882
            LRV   ++ RL P+QRT+LRWLWELH Q  GGI+GDEMGLGKT++++A L +L  S  R LR   L+V PAT+LSHW  EL  W P +RV++LH SG  +G RG+    VIR  Q   G++V TTY  ++ +   L   +WSYA+LDEGHRIRNP  AV  AAK+++  H +ILTG  +QN+LRELW+L DF  PGRLG+   F+    +PI AGGW  ASP     A+  A+ LR L+  +LLRR K++V   LP K ++VL
Sbjct:   49 LRVPAHVWGRLFPYQRTALRWLWELHQQDAGGIVGDEMGLGKTIEVAALLSALRHS--RLLRA-TLIVAPATMLSHWVRELHAWVPDMRVMLLHDSGHAMGARGMSRSRVIRKIQDCGGALV-TTYDAVRLHAAALLPFRWSYAILDEGHRIRNPEAAVTVAAKQLRTAHRLILTGAPIQNNLRELWSLFDFVFPGRLGALDVFDKQLAQPIAAGGWASASPMQAQAAYRCAVVLRDLIQPYLLRRLKRDVNAALPDKTEQVL 307          
BLAST of mRNA_M-pyrifera_M_contig73661.17455.1 vs. uniprot
Match: B8BQH0_THAPS (Rad54-like protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BQH0_THAPS)

HSP 1 Score: 228 bits (581), Expect = 2.560e-67
Identity = 124/268 (46.27%), Postives = 169/268 (63.06%), Query Frame = 1
Query:   85 EEALRVHPWLYHRLLPFQRTSLRWLWELHCQGVGGILGDEMGLGKTVQLSAFLWSLFRSGRRELRLPVLLVCPATLLSHWQGELGEWAPHLRVVVLHSSGEGVGRRGIGVGGVIRVAQRKRGSVVLTTYSGLKANIGVLEREQWSYAVLDEGHRIRNPAIAVARAAKRIQADHCIILTGTVVQNSLRELWALLDFAVPGRLGSKASFEAHFVRPIVAGGWKGASPTAVAVAFERAIALRRLVAGFLLRRRKKEVAT--QLPSKEDKVL 882
            E  L V  W+  RL P+QR  LRW+WEL+C G GG +GDEMGLGKTVQ+S+FL ++  +  R +   VL+VCPAT+LSHW  EL  WAP LR +++H SGE       G            G V++TTY  ++ +  V     WSY VLDEG +IRNP   V  A KR++  + ++++GT +QN LRELW+L DF  PGRLG+  +FEA F  PI  GG+  ASP  V +A+  AI LR L+  +LLRR+KK++    ++P K ++VL
Sbjct:   20 EGGLEVPAWINDRLFPYQRIGLRWMWELYCVGAGGCVGDEMGLGKTVQVSSFLGAM--AANRFID-SVLVVCPATMLSHWLSELAVWAPGLRRIMVHRSGETDDYEEQGADAFCGT-----GIVLVTTYESIRRSPDVYASFDWSYVVLDEGQKIRNPDAEVTLAVKRLRTPNRLLMSGTPIQNDLRELWSLFDFVFPGRLGTLPAFEAEFAEPIKRGGYSNASPMQVQLAYRCAIVLRDLINPYLLRRQKKDIKEVHRMPGKTEQVL 279          
BLAST of mRNA_M-pyrifera_M_contig73661.17455.1 vs. uniprot
Match: A0A7R9T928_9VIRI (Hypothetical protein (Fragment) n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9T928_9VIRI)

HSP 1 Score: 228 bits (582), Expect = 1.920e-66
Identity = 119/256 (46.48%), Postives = 162/256 (63.28%), Query Frame = 1
Query:  115 YHRLLPFQRTSLRWLWELHCQGVGGILGDEMGLGKTVQLSAFLWSLFRSGRRELRLPVLLVCPATLLSHWQGELGEWAPHLRVVVLHSSGEGVGRRGIGVGGVIRVAQRKRGSVVLTTYSGLKANIGVLEREQWSYAVLDEGHRIRNPAIAVARAAKRIQADHCIILTGTVVQNSLRELWALLDFAVPGRLGSKASFEAHFVRPIVAGGWKGASPTAVAVAFERAIALRRLVAGFLLRRRKKEVATQLPSKEDKVL 882
            + +LL +QRT + WLWELHCQG GGI+GDEMGLGKTVQ+++FL  L RSG+ +   P ++VCPAT+L  W  EL  W P  +V +LH S         GV  ++    R    V++TTY  L+ +  VL    W YAVLDEGH+IRNP  AV    K+++  H I +TG  VQN+L ELW++ DF  PGRLG+   F+A F  PI  GG+  A+    A A++ A+ LR +++ +LLRR K +V T LP K ++VL
Sbjct:   79 WDKLLDYQRTCVTWLWELHCQGCGGIVGDEMGLGKTVQMASFLGGLHRSGKYK---PSIIVCPATILRQWLRELRTWHPAFKVAILHRSAGEHASTAAGVRALVARVARSADGVLVTTYEQLRIHAPVLLGVPWGYAVLDEGHKIRNPDAAVTLVCKQLRTVHRIAMTGAPVQNNLTELWSVFDFVFPGRLGTLPVFQAQFALPIQVGGYATATRAQAAAAYKCAVLLRDMISPYLLRRVKADVRTNLPKKTEQVL 331          
BLAST of mRNA_M-pyrifera_M_contig73661.17455.1 vs. uniprot
Match: A0A8J4LU14_9CHLO (Uncharacterized protein (Fragment) n=2 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4LU14_9CHLO)

HSP 1 Score: 225 bits (574), Expect = 8.860e-66
Identity = 122/261 (46.74%), Postives = 162/261 (62.07%), Query Frame = 1
Query:  109 WLYHRLLPFQRTSLRWLWELHCQGVGGILGDEMGLGKTVQLSAFLWSLFRSGRRELRLPVLLVCPATLLSHWQGELGEWAPHLRVVVLHSSGEGVGRRG---IGVGGVIRVAQRKRGSVVLTTYSGLKANIGVLEREQWSYAVLDEGHRIRNPAIAVARAAKRIQADHCIILTGTVVQNSLRELWALLDFAVPGRLGSKASFEAHFVRPIVAGGWKGASPTAVAVAFERAIALRRLVAGFLLRRRKKEVATQLPSKEDKVL 882
            WLY RL  +Q+T+++WLWELH Q  GGILGDEMGLGKTVQ+ A+L  L  SGR     P L+VCPAT++  W  EL  W P  RVVV+H  G      G        ++ VA      +VLTTY  L+    +L R +W  AVLDEGH+IRNP   +    K++   H +I++G+ +QN L ELW+L DF  PG+LG+   F+A F  PI  GG+  A+   V  A++ A+ LR L A +LLRRRK +VA QLP+K ++VL
Sbjct:    3 WLYGRLFDYQQTAVKWLWELHTQQAGGILGDEMGLGKTVQVIAYLAGLHHSGRYR---PSLVVCPATVIRQWLRELRVWWPPFRVVVMHECGRSPPHAGGPRPDKPALLDVALNSSAGLVLTTYDNLRLQRDLLLRVRWGVAVLDEGHKIRNPDSEITLVCKQLHTVHRLIMSGSPIQNRLAELWSLFDFIFPGKLGTLPVFQAQFAVPIQVGGYTNATSLQVTTAYKCAVVLRDLTAPYLLRRRKADVAAQLPAKTEQVL 260          
BLAST of mRNA_M-pyrifera_M_contig73661.17455.1 vs. uniprot
Match: A0A1Y2F7K0_PROLT (SNF2 family N-terminal domain-domain-containing protein n=1 Tax=Protomyces lactucae-debilis TaxID=2754530 RepID=A0A1Y2F7K0_PROLT)

HSP 1 Score: 230 bits (586), Expect = 3.340e-65
Identity = 129/261 (49.43%), Postives = 172/261 (65.90%), Query Frame = 1
Query:  100 VHPWLYHRLLPFQRTSLRWLWELHCQGVGGILGDEMGLGKTVQLSAFLWSLFRSGRRELRLPVLLVCPATLLSHWQGELGEWAPHLRVVVLHSSGEGVGRRGIGVGGVIRVAQRKRGSVVLTTYSGLKANIGVLEREQWSYAVLDEGHRIRNPAIAVARAAKRIQADHCIILTGTVVQNSLRELWALLDFAVPGRLGSKASFEAHFVRPIVAGGWKGASPTAVAVAFERAIALRRLVAGFLLRRRKKEVATQLPSKEDKVL 882
            +HP L+     +Q+T ++WLWELH QG GGI+GDEMGLGKTVQ+ +FL  L  SG+  L  PVL+V PAT++  W  E  +W P LRV +LHSSGE   R G  V  V++    + G V++TTY+GL +   +L    WSYA+LDEGH+IRNP   V+ AAK+++  H +IL+GT +QN+L ELW+L DF  PGRLG+   F A F  PI  GG+  AS   V  AF+ A  LR L++ +LLRR K +VA  LP K ++VL
Sbjct:  298 IHPSLFD----YQKTCVQWLWELHAQGCGGIIGDEMGLGKTVQVISFLAGLSHSGK--LDGPVLIVAPATVMQMWVKEFHKWWPPLRVCILHSSGEAT-RAGSNVRKVVQNVVNE-GHVLVTTYAGLTSYREMLGPVAWSYAILDEGHKIRNPDAEVSLAAKQLRTVHRLILSGTPIQNNLTELWSLFDFCFPGRLGTLPIFHAQFALPINIGGYANASNVQVQTAFKCACVLRDLISPYLLRRMKADVAADLPKKSEQVL 550          
BLAST of mRNA_M-pyrifera_M_contig73661.17455.1 vs. uniprot
Match: A0A2P6VAI5_9CHLO (CHROMATIN REMODELING 8 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VAI5_9CHLO)

HSP 1 Score: 231 bits (588), Expect = 4.680e-65
Identity = 127/269 (47.21%), Postives = 169/269 (62.83%), Query Frame = 1
Query:   85 EEALRVHPWLYHRLLPFQRTSLRWLWELHCQGVGGILGDEMGLGKTVQLSAFLWSLFRSGRRELRLPVLLVCPATLLSHWQGELGEWAPHLRVVVLHSS---GEGVGRRGIGVGGVIRVAQRKRGSVVLTTYSGLKANIGVLEREQWSYAVLDEGHRIRNPAIAVARAAKRIQADHCIILTGTVVQNSLRELWALLDFAVPGRLGSKASFEAHFVRPIVAGGWKGASPTAVAVAFERAIALRRLVAGFLLRRRKKEVATQLPSKEDKVL 882
            E   R+   ++ RL  +QRT+++W+WELH Q  GGI+GDEMGLGKT+Q+ AFL  L  SG   L  P L+VCPAT+L  W  EL  W P  RV +LH S   G G  RR      +  + Q   G ++LTTY  ++   G L   +W Y VLDEGH+IRNP   V   AK++Q  H II++G+ +QN L ELW+L DF  PG+LG+   F A F  PI  GG+  ASP  V+ A++ A+ LR L+A +LLRRRK +V TQLP+K ++VL
Sbjct:  484 EGGFRLPSDVWERLFDYQRTAVKWMWELHTQRAGGIIGDEMGLGKTIQIIAFLAGLHHSG---LFRPTLIVCPATVLRQWLRELRAWWPLFRVALLHDSARSGAGAARRPSRTRIIKEIGQSGSG-ILLTTYETMRLQRGELLDVEWGYVVLDEGHKIRNPDAEVTLVAKQVQTVHRIIMSGSPIQNRLTELWSLFDFVFPGKLGTLPIFTAQFALPIQIGGYANASPLQVSTAYKCAVILRDLIAPYLLRRRKADVRTQLPAKTEQVL 748          
BLAST of mRNA_M-pyrifera_M_contig73661.17455.1 vs. uniprot
Match: A0A250XF09_9CHLO (Helicase ATP-binding domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XF09_9CHLO)

HSP 1 Score: 229 bits (585), Expect = 4.980e-65
Identity = 124/271 (45.76%), Postives = 171/271 (63.10%), Query Frame = 1
Query:   97 RVHPWLYHRLLPFQRTSLRWLWELHCQGVGGILGDEMGLGKTVQLSAFLWSLFRSGRRELRLPVLLVCPATLLSHWQGELGEWAPHLRVVVLHSSGEGVGRRGIGVGG---------VIRVAQRKRGSVVLTTYSGLKANIGVLEREQWSYAVLDEGHRIRNPAIAVARAAKRIQADHCIILTGTVVQNSLRELWALLDFAVPGRLGSKASFEAHFVRPIVAGGWKGASPTAVAVAFERAIALRRLVAGFLLRRRKKEVATQLPSKEDKVL 882
            ++  +LY RL P+Q+T+++WLWEL  Q  GGILGDEMGLGKTV+++AFL  L  SG   L  P L+VCPAT+L  W  E+  WAP  RV++ H S  G      G GG         V++  +     ++LTTY  L+A+  +L   +W  A+LDEGH+IRNP   +   AK++Q  H +I++G+ +QN L ELW+L DF  PGRLG+   F+A F  PI  GG+  ASP  V  A++ A+ LR L+A +LLRRRK +V  QLP K ++VL
Sbjct:  654 KIPTYLYSRLFPYQQTAVKWLWELRNQRTGGILGDEMGLGKTVEITAFLAGLLHSG---LYRPSLIVCPATVLRQWLREVRLWAPEFRVIMFHDSARG------GRGGATRLSKEDLVLKATRESPTGLLLTTYESLRAHRHLLLPVRWGIAILDEGHKIRNPDAEITLVAKQLQTVHRLIMSGSPIQNRLSELWSLFDFIFPGRLGTLPVFQAQFSIPIQVGGYTNASPLQVTTAYKCAVLLRDLIAPYLLRRRKVDVNAQLPKKTEQVL 915          
BLAST of mRNA_M-pyrifera_M_contig73661.17455.1 vs. uniprot
Match: A0A7R9TN30_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9TN30_MICPS)

HSP 1 Score: 227 bits (579), Expect = 1.030e-64
Identity = 125/270 (46.30%), Postives = 165/270 (61.11%), Query Frame = 1
Query:   94 LRVHPWLYHRLLPFQRTSLRWLWELHCQGVGGILGDEMGLGKTVQLSAFLWSLFRSGRRELRLPVLLVCPATLLSHWQGELGEWAPHLRVVVLHSSGEGVGRRGIGVGG-------VIRVAQRKRGSVVLTTYSGLKANIGVLEREQWSYAVLDEGHRIRNPAIAVARAAKRIQADHCIILTGTVVQNSLRELWALLDFAVPGRLGSKASFEAHFVRPIVAGGWKGASPTAVAVAFERAIALRRLVAGFLLRRRKKEVATQLPSKEDKVL 882
            LR+    Y RLL  Q+TS++WLWE+HCQ  GG++GDEMGLGKTVQ++AFL +L RSG   L  P L+VCPAT+L  W+ EL  WAP L   +LH S      R    G        +IR   R    V+LTTY  L+     L   +W YA+LDEGH+IRNP   V   AK++Q  H +++TG  +QN L ELW+L DF  PG+LG+   F+A F  PI  GG+  AS   V  A+  A  L+ L++ +LLRR K +V  QLP+K ++VL
Sbjct:  253 LRLPAETYDRLLEHQKTSIKWLWEIHCQRAGGVVGDEMGLGKTVQVAAFLCALERSG---LYQPTLIVCPATMLRQWRRELRAWAPKLNCGILHESAVSAASRTAARGSKKQARCNIIRERVRDPKGVLLTTYEHLRVMRDHLLPVRWGYAILDEGHKIRNPDADVTICAKQLQTVHRLVMTGAPIQNRLAELWSLFDFCFPGKLGTLPVFQAQFAVPIQVGGYSNASQQQVTTAYRCASMLKELISPYLLRRMKADVDIQLPTKTEQVL 519          
BLAST of mRNA_M-pyrifera_M_contig73661.17455.1 vs. uniprot
Match: C1MMZ1_MICPC (Ran-binding dexh-box helicase n=3 Tax=Micromonas pusilla TaxID=38833 RepID=C1MMZ1_MICPC)

HSP 1 Score: 228 bits (581), Expect = 4.280e-64
Identity = 125/270 (46.30%), Postives = 165/270 (61.11%), Query Frame = 1
Query:   94 LRVHPWLYHRLLPFQRTSLRWLWELHCQGVGGILGDEMGLGKTVQLSAFLWSLFRSGRRELRLPVLLVCPATLLSHWQGELGEWAPHLRVVVLHSSGEGVGRRGIGVGG-------VIRVAQRKRGSVVLTTYSGLKANIGVLEREQWSYAVLDEGHRIRNPAIAVARAAKRIQADHCIILTGTVVQNSLRELWALLDFAVPGRLGSKASFEAHFVRPIVAGGWKGASPTAVAVAFERAIALRRLVAGFLLRRRKKEVATQLPSKEDKVL 882
            LR+    Y RLL  Q+TS++WLWE+HCQ  GG++GDEMGLGKTVQ++AFL +L RSG   L  P L+VCPAT+L  W+ EL  WAP L   +LH S      R    G        +IR   R    V+LTTY  L+     L   +W YA+LDEGH+IRNP   V   AK++Q  H +++TG  +QN L ELW+L DF  PG+LG+   F+A F  PI  GG+  AS   V  A+  A  L+ L++ +LLRR K +V  QLP+K ++VL
Sbjct:  634 LRLPAETYDRLLEHQKTSIKWLWEIHCQRAGGVVGDEMGLGKTVQVAAFLCALERSG---LYQPTLIVCPATMLRQWRRELRAWAPKLNCGILHESAVSAASRAAARGSKKQARCNIIRERVRDPKGVLLTTYEHLRVMRDHLLPVRWGYAILDEGHKIRNPDADVTICAKQLQTVHRLVMTGAPIQNRLAELWSLFDFCFPGKLGTLPVFQAQFAVPIQVGGYSNASQQQVTTAYRCASMLKELISPYLLRRMKADVDIQLPTKTEQVL 900          
BLAST of mRNA_M-pyrifera_M_contig73661.17455.1 vs. uniprot
Match: D8TIE9_VOLCA (Uncharacterized protein n=3 Tax=Eukaryota TaxID=2759 RepID=D8TIE9_VOLCA)

HSP 1 Score: 228 bits (581), Expect = 4.320e-64
Identity = 127/270 (47.04%), Postives = 165/270 (61.11%), Query Frame = 1
Query:   85 EEALRVHPWLYHRLLPFQRTSLRWLWELHCQGVGGILGDEMGLGKTVQLSAFLWSLFRSGRRELRLPVLLVCPATLLSHWQGELGEWAPHLRVVVLHSSGEGVGRRGIGVG----GVIRVAQRKRGSVVLTTYSGLKANIGVLEREQWSYAVLDEGHRIRNPAIAVARAAKRIQADHCIILTGTVVQNSLRELWALLDFAVPGRLGSKASFEAHFVRPIVAGGWKGASPTAVAVAFERAIALRRLVAGFLLRRRKKEVATQLPSKEDKVL 882
            E   RV   LY RL  +Q+T+++WLWELH Q  GGILGDEMGLGKTVQ+ A+L  L  SG   L  P L+VCPAT+L  W  EL  W P  RVV+LH SG         V      ++ VA      +VLTTY  L+    +L R +W  AVLDEGH+IRNP   +    K++   H +I++G+ +QN L ELW+L DF  PG+LG+   F+A F  PI  GG+  AS   V  A++ A+ LR L A +LLRRRK +VA QLP+K ++VL
Sbjct:  440 EGGFRVPSRLYGRLFDYQQTAVKWLWELHTQRAGGILGDEMGLGKTVQVIAYLAGLHHSG---LYRPSLIVCPATVLRQWMRELRSWWPPFRVVLLHESGRSPPAAATAVRPDRPALLEVALSSPSGLVLTTYDNLRLQRDLLLRVRWGVAVLDEGHKIRNPDSEITLVCKQLHTVHRLIMSGSPIQNRLSELWSLFDFIFPGKLGTLPVFQAQFAVPIQVGGYSNASSLQVTTAYKCAVVLRDLTAPYLLRRRKADVAAQLPAKMEQVL 706          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig73661.17455.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1CLV3_9STRA1.260e-7450.95Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
B8BQH0_THAPS2.560e-6746.27Rad54-like protein (Fragment) n=1 Tax=Thalassiosir... [more]
A0A7R9T928_9VIRI1.920e-6646.48Hypothetical protein (Fragment) n=1 Tax=Prasinoder... [more]
A0A8J4LU14_9CHLO8.860e-6646.74Uncharacterized protein (Fragment) n=2 Tax=Volvox ... [more]
A0A1Y2F7K0_PROLT3.340e-6549.43SNF2 family N-terminal domain-domain-containing pr... [more]
A0A2P6VAI5_9CHLO4.680e-6547.21CHROMATIN REMODELING 8 n=1 Tax=Micractinium conduc... [more]
A0A250XF09_9CHLO4.980e-6545.76Helicase ATP-binding domain-containing protein n=1... [more]
A0A7R9TN30_MICPS1.030e-6446.30Hypothetical protein (Fragment) n=1 Tax=Micromonas... [more]
C1MMZ1_MICPC4.280e-6446.30Ran-binding dexh-box helicase n=3 Tax=Micromonas p... [more]
D8TIE9_VOLCA4.320e-6447.04Uncharacterized protein n=3 Tax=Eukaryota TaxID=27... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig73661contigM-pyrifera_M_contig73661:211..1092 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score233.8
Seed ortholog evalue1e-58
Seed eggNOG ortholog35128.Thaps267997
Preferred nameERCC6
KEGG koko:K10841
KEGG Pathwayko03420,map03420
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0001207,GO:0001208,GO:0001932,GO:0001934,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003682,GO:0003824,GO:0004003,GO:0004386,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006283,GO:0006284,GO:0006289,GO:0006325,GO:0006351,GO:0006355,GO:0006357,GO:0006366,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006979,GO:0006996,GO:0008022,GO:0008023,GO:0008026,GO:0008047,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009650,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010212,GO:0010332,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010562,GO:0010604,GO:0010628,GO:0010767,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019207,GO:0019209,GO:0019219,GO:0019220,GO:0019222,GO:0019438,GO:0019887,GO:0019899,GO:0030234,GO:0030295,GO:0030296,GO:0030554,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031399,GO:0031401,GO:0031974,GO:0031981,GO:0032147,GO:0032268,GO:0032270,GO:0032392,GO:0032508,GO:0032553,GO:0032555,GO:0032559,GO:0032774,GO:0032784,GO:0032786,GO:0032991,GO:0033554,GO:0033674,GO:0034641,GO:0034644,GO:0034645,GO:0034654,GO:0034728,GO:0035639,GO:0036094,GO:0040029,GO:0042325,GO:0042327,GO:0042623,GO:0043085,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043549,GO:0043618,GO:0043620,GO:0043933,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0044877,GO:0045815,GO:0045859,GO:0045860,GO:0045893,GO:0045935,GO:0045937,GO:0046483,GO:0047485,GO:0048518,GO:0048522,GO:0050730,GO:0050731,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051174,GO:0051246,GO:0051247,GO:0051252,GO:0051254,GO:0051276,GO:0051338,GO:0051347,GO:0051716,GO:0060255,GO:0061097,GO:0061098,GO:0065007,GO:0065009,GO:0070013,GO:0070035,GO:0070063,GO:0071103,GO:0071214,GO:0071478,GO:0071482,GO:0071704,GO:0071824,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:0097659,GO:0098772,GO:0104004,GO:0140097,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141
EggNOG free text desc.histone H2A-H2B dimer displacement
EggNOG OGs2XBIJ@2836,COG0553@1,KOG0387@2759
COG Functional cat.KL
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03036,ko03400
Exons1
Model size882
Cds size882
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816633.7879279-CDS-M-pyrifera_M_contig73661:210..10921622816633.7879279-CDS-M-pyrifera_M_contig73661:210..1092Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig73661 211..1092 +
1692278089.3574216-CDS-M-pyrifera_M_contig73661:210..10921692278089.3574216-CDS-M-pyrifera_M_contig73661:210..1092Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig73661 211..1092 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig73661.17455.1prot_M-pyrifera_M_contig73661.17455.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig73661 211..1092 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig73661.17455.1

>prot_M-pyrifera_M_contig73661.17455.1 ID=prot_M-pyrifera_M_contig73661.17455.1|Name=mRNA_M-pyrifera_M_contig73661.17455.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=294bp
DENDEKDEKIDLDEDVLIWRVGREGARGEEALRVHPWLYHRLLPFQRTSL
RWLWELHCQGVGGILGDEMGLGKTVQLSAFLWSLFRSGRRELRLPVLLVC
PATLLSHWQGELGEWAPHLRVVVLHSSGEGVGRRGIGVGGVIRVAQRKRG
SVVLTTYSGLKANIGVLEREQWSYAVLDEGHRIRNPAIAVARAAKRIQAD
HCIILTGTVVQNSLRELWALLDFAVPGRLGSKASFEAHFVRPIVAGGWKG
ASPTAVAVAFERAIALRRLVAGFLLRRRKKEVATQLPSKEDKVL
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mRNA from alignment at M-pyrifera_M_contig73661:211..1092+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig73661.17455.1 ID=mRNA_M-pyrifera_M_contig73661.17455.1|Name=mRNA_M-pyrifera_M_contig73661.17455.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=882bp|location=Sequence derived from alignment at M-pyrifera_M_contig73661:211..1092+ (Macrocystis pyrifera P11B4 male)
GATGAAAACGATGAAAAAGATGAAAAAATCGATTTGGATGAAGATGTGTT GATTTGGCGCGTTGGTCGAGAGGGAGCTAGAGGAGAGGAGGCATTACGTG TACATCCTTGGTTGTATCACCGTTTGCTTCCGTTCCAACGCACTAGTTTG CGTTGGTTGTGGGAGTTGCATTGCCAGGGAGTGGGTGGGATTTTGGGGGA CGAGATGGGGTTGGGCAAAACTGTGCAGTTAAGTGCGTTTTTGTGGAGTT TGTTCCGCAGTGGTCGTCGGGAGCTGCGTCTCCCTGTGCTCTTGGTGTGT CCTGCCACTCTCTTGAGCCACTGGCAAGGGGAGTTGGGGGAGTGGGCGCC TCACTTGCGAGTGGTGGTGTTGCATTCGAGCGGAGAAGGGGTTGGGAGGC GTGGGATTGGGGTTGGTGGCGTGATTCGAGTGGCACAAAGGAAGAGGGGC AGTGTGGTGCTGACCACGTACTCTGGGTTGAAGGCGAACATTGGGGTGCT GGAGAGAGAACAGTGGAGCTATGCAGTGCTGGATGAAGGGCATCGCATTC GCAACCCAGCCATTGCCGTCGCTCGAGCAGCCAAGCGCATCCAAGCAGAC CACTGCATCATCCTCACAGGCACCGTCGTGCAGAATTCTCTACGGGAGCT CTGGGCGTTGCTGGATTTCGCGGTTCCTGGTCGATTGGGCTCCAAGGCTT CGTTTGAAGCCCATTTCGTGCGTCCCATCGTCGCTGGCGGGTGGAAAGGC GCCTCTCCCACAGCAGTGGCCGTTGCATTCGAGCGAGCCATAGCGCTTCG AAGACTCGTGGCGGGGTTTTTGCTCCGAAGACGCAAGAAGGAAGTGGCCA CACAGCTGCCCTCGAAGGAAGACAAGGTGCTT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig73661:211..1092+

>mRNA_M-pyrifera_M_contig73661.17455.1 ID=mRNA_M-pyrifera_M_contig73661.17455.1|Name=mRNA_M-pyrifera_M_contig73661.17455.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1764bp|location=Sequence derived from alignment at M-pyrifera_M_contig73661:211..1092+ (Macrocystis pyrifera P11B4 male)
GATGAAAACGATGAAAAAGATGAAAAAATCGATTTGGATGAAGATGTGTT
GATTTGGCGCGTTGGTCGAGAGGGAGCTAGAGGAGAGGAGGCATTACGTG
TACATCCTTGGTTGTATCACCGTTTGCTTCCGTTCCAACGCACTAGTTTG
CGTTGGTTGTGGGAGTTGCATTGCCAGGGAGTGGGTGGGATTTTGGGGGA
CGAGATGGGGTTGGGCAAAACTGTGCAGTTAAGTGCGTTTTTGTGGAGTT
TGTTCCGCAGTGGTCGTCGGGAGCTGCGTCTCCCTGTGCTCTTGGTGTGT
CCTGCCACTCTCTTGAGCCACTGGCAAGGGGAGTTGGGGGAGTGGGCGCC
TCACTTGCGAGTGGTGGTGTTGCATTCGAGCGGAGAAGGGGTTGGGAGGC
GTGGGATTGGGGTTGGTGGCGTGATTCGAGTGGCACAAAGGAAGAGGGGC
AGTGTGGTGCTGACCACGTACTCTGGGTTGAAGGCGAACATTGGGGTGCT
GGAGAGAGAACAGTGGAGCTATGCAGTGCTGGATGAAGGGCATCGCATTC
GCAACCCAGCCATTGCCGTCGCTCGAGCAGCCAAGCGCATCCAAGCAGAC
CACTGCATCATCCTCACAGGCACCGTCGTGCAGAATTCTCTACGGGAGCT
CTGGGCGTTGCTGGATTTCGCGGTTCCTGGTCGATTGGGCTCCAAGGCTT
CGTTTGAAGCCCATTTCGTGCGTCCCATCGTCGCTGGCGGGTGGAAAGGC
GCCTCTCCCACAGCAGTGGCCGTTGCATTCGAGCGAGCCATAGCGCTTCG
AAGACTCGTGGCGGGGTTTTTGCTCCGAAGACGCAAGAAGGAAGTGGCCA
CACAGCTGCCCTCGAAGGAAGACAAGGTGCTTGATGAAAACGATGAAAAA
GATGAAAAAATCGATTTGGATGAAGATGTGTTGATTTGGCGCGTTGGTCG
AGAGGGAGCTAGAGGAGAGGAGGCATTACGTGTACATCCTTGGTTGTATC
ACCGTTTGCTTCCGTTCCAACGCACTAGTTTGCGTTGGTTGTGGGAGTTG
CATTGCCAGGGAGTGGGTGGGATTTTGGGGGACGAGATGGGGTTGGGCAA
AACTGTGCAGTTAAGTGCGTTTTTGTGGAGTTTGTTCCGCAGTGGTCGTC
GGGAGCTGCGTCTCCCTGTGCTCTTGGTGTGTCCTGCCACTCTCTTGAGC
CACTGGCAAGGGGAGTTGGGGGAGTGGGCGCCTCACTTGCGAGTGGTGGT
GTTGCATTCGAGCGGAGAAGGGGTTGGGAGGCGTGGGATTGGGGTTGGTG
GCGTGATTCGAGTGGCACAAAGGAAGAGGGGCAGTGTGGTGCTGACCACG
TACTCTGGGTTGAAGGCGAACATTGGGGTGCTGGAGAGAGAACAGTGGAG
CTATGCAGTGCTGGATGAAGGGCATCGCATTCGCAACCCAGCCATTGCCG
TCGCTCGAGCAGCCAAGCGCATCCAAGCAGACCACTGCATCATCCTCACA
GGCACCGTCGTGCAGAATTCTCTACGGGAGCTCTGGGCGTTGCTGGATTT
CGCGGTTCCTGGTCGATTGGGCTCCAAGGCTTCGTTTGAAGCCCATTTCG
TGCGTCCCATCGTCGCTGGCGGGTGGAAAGGCGCCTCTCCCACAGCAGTG
GCCGTTGCATTCGAGCGAGCCATAGCGCTTCGAAGACTCGTGGCGGGGTT
TTTGCTCCGAAGACGCAAGAAGGAAGTGGCCACACAGCTGCCCTCGAAGG
AAGACAAGGTGCTT
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