mRNA_M-pyrifera_M_contig73625.17448.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig73625.17448.1
Unique NamemRNA_M-pyrifera_M_contig73625.17448.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig73625.17448.1 vs. uniprot
Match: A0A7C1U4N3_9GAMM (Efflux RND transporter periplasmic adaptor subunit n=1 Tax=Thiotrichales bacterium TaxID=2026796 RepID=A0A7C1U4N3_9GAMM)

HSP 1 Score: 357 bits (915), Expect = 1.640e-119
Identity = 184/329 (55.93%), Postives = 243/329 (73.86%), Query Frame = 1
Query:    4 AAKRAEMGIVTAPVELHALAPEIKAPGEVALNAYRTSQVAPRIDAQVVARHSRMGNTVNAGDPVVTLSSVDVADAVGDLLVNDREWRRVKALGRDVVSEARYVIAEVSRQQAYAKVLAYGMPKTSLQRLLAQGDASQATGEYTLYAPHDGVVIQDNFVVGEVVDAGRLLMEVSDVSTLWIEARVDPELAAAIQVGDAARVSADEEIWITGTVTQRHQRVDESTRTRGIRIEV--PNDGDLAPGQFVNIAVSAGASEPVLAVPRDAVVLILGNPMVFALEDNEFEPRPVEVGMTTADWRVVTAGLESGEEIAVAGVFQLKSLLLKSQIGD 984
            A +RA +GI  AP E   L  EI APGEVA+N YRT++V PRI AQV ARH ++G  V  GDP+VTLSSV +A+A G+LLV DREW RV+ LGR+VVSE R++ A+V RQQAYA+VLAYGM K  +QRLL++GDAS+ATGE+ L AP DG+V  D+F +GE+++ GR+L+ ++D STLW+EA++DP  A A++ GD AR+S D      G V Q H ++DE++RT  +RIEV  P++G L PGQFV + +  G S PVLAVPR+AV+L+ G P +F LE ++F+P+ VE G+T   W  +TAGL  GE++AV G F LKSL LKSQIGD
Sbjct:   14 AQRRAALGIEVAPAERRMLPLEITAPGEVAVNLYRTAEVTPRIPAQVAARHVQLGQVVKKGDPLVTLSSVAMAEAQGELLVADREWERVRKLGRNVVSETRFITAQVGRQQAYARVLAYGMTKGQVQRLLSRGDASRATGEFALLAPQDGLVYGDDFALGELIEPGRVLVRITDESTLWVEAKLDPAAAEAVRPGDPARISTDSGRDFRGKVIQFHHQLDEASRTLMVRIEVQSPDEG-LHPGQFVEVGIDTGESRPVLAVPREAVLLMQGGPALFKLEGDDFKPQAVETGVTRGGWTEITAGLTEGEQVAVKGAFILKSLALKSQIGD 341          
BLAST of mRNA_M-pyrifera_M_contig73625.17448.1 vs. uniprot
Match: A0A7C1U1U3_9GAMM (Efflux RND transporter periplasmic adaptor subunit n=1 Tax=Thiotrichales bacterium TaxID=2026796 RepID=A0A7C1U1U3_9GAMM)

HSP 1 Score: 358 bits (918), Expect = 2.120e-119
Identity = 182/326 (55.83%), Postives = 234/326 (71.78%), Query Frame = 1
Query:   10 KRAEMGIVTAPVELHALAPEIKAPGEVALNAYRTSQVAPRIDAQVVARHSRMGNTVNAGDPVVTLSSVDVADAVGDLLVNDREWRRVKALGRDVVSEARYVIAEVSRQQAYAKVLAYGMPKTSLQRLLAQGDASQATGEYTLYAPHDGVVIQDNFVVGEVVDAGRLLMEVSDVSTLWIEARVDPELAAAIQVGDAARVSADEEIWITGTVTQRHQRVDESTRTRGIRIEVPNDGDLA-PGQFVNIAVSAGASEPVLAVPRDAVVLILGNPMVFALEDNEFEPRPVEVGMTTADWRVVTAGLESGEEIAVAGVFQLKSLLLKSQIGD 984
            +R   GI T P E   L   + APGEV LN YR+S+V PRI AQ+VARH+R+G+ VN G  +VTLSSVD+A+A GDLLV D EWRR + LGR VVSE RY+ A+V RQQAYA+VLAYGM K  ++ LL +GDASQATG + L +P DGVV+ D+F++GE+ + GR+L EV+D S LW+EAR++PE A+ +Q+G  A VS D   W+ G V QRH R+DE+TRT+ +RI + N  DL  PGQFV + V  G   PV+AVPRDAVVL+ G+  VF +E +E  P+PVE G+T A W  + AGL  GEE+   G F LKSLLLKSQ+G+
Sbjct:   53 ERKAQGIATGPAERRVLNELVSAPGEVRLNIYRSSKVTPRIAAQIVARHARLGDEVNRGKALVTLSSVDMAEAQGDLLVADMEWRRAQRLGRKVVSERRYIEAQVKRQQAYARVLAYGMTKDQIETLLKRGDASQATGAFDLLSPQDGVVVADDFILGELAEPGRVLFEVTDESVLWVEARLNPEDASRVQIGAPAHVSVDGSTWLEGEVIQRHHRLDETTRTQSLRIRIDNRDDLLHPGQFVEVKVQTGQGRPVVAVPRDAVVLMQGSFTVFKVEGDELHPQPVETGVTRAGWTEIRAGLAEGEEVVTRGAFLLKSLLLKSQMGE 378          
BLAST of mRNA_M-pyrifera_M_contig73625.17448.1 vs. uniprot
Match: A0A7R7GL52_9GAMM (RND transporter n=2 Tax=Thiohalobacter sp. COW1 TaxID=2795687 RepID=A0A7R7GL52_9GAMM)

HSP 1 Score: 349 bits (895), Expect = 7.100e-117
Identity = 179/309 (57.93%), Postives = 230/309 (74.43%), Query Frame = 1
Query:   67 EIKAPGEVALNAYRTSQVAPRIDAQVVARHSRMGNTVNAGDPVVTLSSVDVADAVGDLLVNDREWRRVKALGRDVVSEARYVIAEVSRQQAYAKVLAYGMPKTSLQRLLAQGDASQATGEYTLYAPHDGVVIQDNFVVGEVVDAGRLLMEVSDVSTLWIEARVDPELAAAIQVGDAARVSADEEIWITGTVTQRHQRVDESTRTRGIRIEVPN-DGDLAPGQFVNIAVSAGASEPVLAVPRDAVVLILGNPMVFALEDNEFEPRPVEVGMTTADWRVVTAGLESGEEIAVAGVFQLKSLLLKSQIGDTD 990
            E+ APGEV +N YRT+QV PRI AQVVARH +MG TV  G+ +VTLSSV +ADA G+LLV DREW RVK LGR VVSE R+V A+V RQQAYAKVLAYGM    + RLLAQGDAS+ATGE+ L AP DG+V  D+F +GE+++ GR+L+ ++D STLW+EA++DP  A A+Q+G+ AR+S +      G V Q H  +DE++RT  +RIEV N D  L PGQFV++A+  G S PVLAVPR+A++L+ G P VF LE ++F+P+ V+ G+T + W  VTAGL  G+ +AV G F LKSL LKSQIGD D
Sbjct:    8 EVTAPGEVEVNLYRTAQVTPRIAAQVVARHVQMGQTVKKGEQLVTLSSVAMADAQGELLVADREWARVKKLGRQVVSETRFVEAQVKRQQAYAKVLAYGMTPGQVDRLLAQGDASKATGEFALLAPQDGLVHDDDFAIGELIEPGRVLVRLTDESTLWVEAKLDPAAAEAVQLGNPARISVNGADEFRGKVIQFHHHLDEASRTLVVRIEVQNVDDALHPGQFVDVAIGTGESRPVLAVPREAMLLLQGGPAVFKLEGDDFKPQAVQAGVTRSGWTEVTAGLAEGDRVAVKGAFTLKSLALKSQIGDAD 316          
BLAST of mRNA_M-pyrifera_M_contig73625.17448.1 vs. uniprot
Match: A0A7C1THN1_9GAMM (Efflux RND transporter periplasmic adaptor subunit n=2 Tax=root TaxID=1 RepID=A0A7C1THN1_9GAMM)

HSP 1 Score: 349 bits (895), Expect = 3.450e-116
Identity = 185/330 (56.06%), Postives = 239/330 (72.42%), Query Frame = 1
Query:    4 AAKRAEMGIVTAPVELHALAPEIKAPGEVALNAYRTSQVAPRIDAQVVARHSRMGNTVNAGDPVVTLSSVDVADAVGDLLVNDREWRRVKALGRDVVSEARYVIAEVSRQQAYAKVLAYGMPKTSLQRLLAQGDASQATGEYTLYAPHDGVVIQDNFVVGEVVDAGRLLMEVSDVSTLWIEARVDPELAAAIQVGDAARVSADEEIWITGTVTQRHQRVDESTRTRGIRIEVPNDGD-LAPGQFVNIAVSAGASEPVLAVPRDAVVLILGNPMVFALEDNEFEPRPVEVGMTTADWRVVTAGLESGEEIAVAGVFQLKSLLLKSQIGDTD 990
            AA R   GI TA V+ HAL+  ++APGEV++N YR++QV PRI AQV+ RH+ +G+ V  G  +VTLSSVD+ADA G LLV+DREWRRVK LGR VVSE RYV A+V+RQQAYA+VLAYGM KT +  LL Q DAS+ATG + L++P  G +I DNF+VGE+ + GRLL E+SD S LW+EA++ PE A  I+ G +A VS D + WI G V QRH +++E+TRT+ IRIEV N GD L PGQFV   V  G + PV+AV + AV+L+ G+P VF +E +E  P PVE G T + +  + AGL  G+E+ + G F LKSL LKSQIGD+D
Sbjct:   34 AATRQAQGIRTARVKRHALSDLVRAPGEVSINIYRSAQVTPRISAQVIKRHAVLGDEVTKGQRLVTLSSVDMADAQGALLVSDREWRRVKKLGRKVVSERRYVAAQVARQQAYARVLAYGMNKTQIIALLKQMDASRATGAFDLFSPQAGTIIDDNFIVGELAEPGRLLFEISDESLLWVEAQLSPEDAVRIKRGVSASVSVDGKTWIKGRVIQRHHKLNETTRTQSIRIEVANVGDMLHPGQFVQTVVQTGDAAPVVAVEQTAVILMQGSPTVFKVEGDELLPMPVETGRTRSGFTEIRAGLAVGDEVVIKGAFLLKSLALKSQIGDSD 363          
BLAST of mRNA_M-pyrifera_M_contig73625.17448.1 vs. uniprot
Match: A0A2E6RC81_9GAMM (Efflux transporter periplasmic adaptor subunit n=1 Tax=Xanthomonadales bacterium TaxID=2006849 RepID=A0A2E6RC81_9GAMM)

HSP 1 Score: 348 bits (894), Expect = 5.960e-116
Identity = 179/331 (54.08%), Postives = 243/331 (73.41%), Query Frame = 1
Query:    1 SAAKRAEMGIVTAPVELHALAPEIKAPGEVALNAYRTSQVAPRIDAQVVARHSRMGNTVNAGDPVVTLSSVDVADAVGDLLVNDREWRRVKALGRDVVSEARYVIAEVSRQQAYAKVLAYGMPKTSLQRLLAQGDASQATGEYTLYAPHDGVVIQDNFVVGEVVDAGRLLMEVSDVSTLWIEARVDPELAAAIQVGDAARVSADEEIWITGTVTQRHQRVDESTRTRGIRIEVPNDGD-LAPGQFVNIAVSAGASEPVLAVPRDAVVLILGNPMVFALEDNEFEPRPVEVGMTTADWRVVTAGLESGEEIAVAGVFQLKSLLLKSQIGDTD 990
            +A ++A +GI  AP    +L  E+ APGEV +N YRT+Q  PRI AQVVARH +MG  V  G+P+VTLSSV +A+A G L+ +DREW RV+ LGRDVVS+ RYV AEV+RQQAYA+ LAYGM    ++RLL+QGDAS+ATGE+ L AP  G+V  D+F +GE+++ GR+L+ ++D STLW+EA++DP  AAA+++G+ AR+  + E   +G V Q H  +D+++RT  +RIEV N  D L PGQFV++A+  GAS PVLAVPR+AV+L+ G P VF LE ++F+P  V+ G+T   W  +TAGL  GE++A+ G F LKSL LKSQIGD D
Sbjct:   39 NAKQQAALGIEVAPAVRRSLPVEVTAPGEVEVNLYRTAQATPRIAAQVVARHVQMGQIVQKGEPLVTLSSVAMAEAQGALVESDREWERVRKLGRDVVSDKRYVAAEVARQQAYARALAYGMTPGQVERLLSQGDASRATGEFDLLAPQRGLVYDDDFTLGELIEPGRVLVRLTDESTLWVEAKLDPADAAAVELGNPARIGVNGEGEFSGKVIQFHYHLDKASRTLVVRIEVQNVHDALHPGQFVDVAIDTGASRPVLAVPREAVLLMQGGPAVFKLEGDDFKPLAVQTGVTRGGWTEITAGLSEGEQVAIKGAFTLKSLALKSQIGDAD 369          
BLAST of mRNA_M-pyrifera_M_contig73625.17448.1 vs. uniprot
Match: A0A7C1XR17_9GAMM (Efflux RND transporter periplasmic adaptor subunit n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C1XR17_9GAMM)

HSP 1 Score: 343 bits (881), Expect = 4.550e-114
Identity = 181/328 (55.18%), Postives = 236/328 (71.95%), Query Frame = 1
Query:    4 AAKRAEMGIVTAPVELHALAPEIKAPGEVALNAYRTSQVAPRIDAQVVARHSRMGNTVNAGDPVVTLSSVDVADAVGDLLVNDREWRRVKALGRDVVSEARYVIAEVSRQQAYAKVLAYGMPKTSLQRLLAQGDASQATGEYTLYAPHDGVVIQDNFVVGEVVDAGRLLMEVSDVSTLWIEARVDPELAAAIQVGDAARVSADEEIWITGTVTQRHQRVDESTRTRGIRIEVPNDGD-LAPGQFVNIAVSAGASEPVLAVPRDAVVLILGNPMVFALEDNEFEPRPVEVGMTTADWRVVTAGLESGEEIAVAGVFQLKSLLLKSQIGD 984
            A+ R   GI TA V+LHAL+  ++APGEV++N YR++QV PRI AQV+ RH+ +G+ V  G  +VTLSSVD+ADA G LLV DREW+RVK LGR VVSE RYV A+V+RQQAYA+VLAYGM KT +  LL Q D ++ATG + L++P  G +I DNF+VGE+   GRLL E+SD S LW+EA++ PE A  I+ G +A VS D + WI G V QRH R++E+TRT+ IRIEVPN  D L PGQFV   V  G + PV+AV + AV+L+ G+P VF ++ +E  P+PVE G T + +  V AGL  G+E+ + G F LKSL LKSQIG+
Sbjct:   34 ASTRQAQGIRTARVKLHALSDLVRAPGEVSINIYRSTQVTPRISAQVIKRHAVLGDEVTKGQRLVTLSSVDMADAQGALLVADREWQRVKGLGRKVVSERRYVAAQVARQQAYARVLAYGMSKTQISALLKQKDVARATGAFDLFSPQTGTIIDDNFIVGELAKPGRLLFEISDESLLWVEAQLPPEDAVRIKRGASASVSIDGKTWIKGRVIQRHHRLNETTRTQSIRIEVPNTEDTLHPGQFVQAVVQTGNAAPVIAVAQTAVILMQGSPTVFKVKGDELLPQPVETGRTRSGFTEVRAGLAVGDEVVIKGAFLLKSLALKSQIGE 361          
BLAST of mRNA_M-pyrifera_M_contig73625.17448.1 vs. uniprot
Match: A0A7C2AFM1_9GAMM (Efflux RND transporter periplasmic adaptor subunit n=1 Tax=Chromatiales bacterium TaxID=2026725 RepID=A0A7C2AFM1_9GAMM)

HSP 1 Score: 340 bits (872), Expect = 2.860e-113
Identity = 172/324 (53.09%), Postives = 234/324 (72.22%), Query Frame = 1
Query:   22 MGIVTAPVELHALAPEIKAPGEVALNAYRTSQVAPRIDAQVVARHSRMGNTVNAGDPVVTLSSVDVADAVGDLLVNDREWRRVKALGRDVVSEARYVIAEVSRQQAYAKVLAYGMPKTSLQRLLAQGDASQATGEYTLYAPHDGVVIQDNFVVGEVVDAGRLLMEVSDVSTLWIEARVDPELAAAIQVGDAARVSADEEIWITGTVTQRHQRVDESTRTRGIRIEVPND-GDLAPGQFVNIAVSAGASEPVLAVPRDAVVLILGNPMVFALEDNEFEPRPVEVGMTTADWRVVTAGLESGEEIAVAGVFQLKSLLLKSQIGDTD 990
            MGI+T  V    LA E+ AP EV +N YRT++V PRI AQ++ RH+RMG  V  G+ ++TLSSV++ADA G+LL+  REWRRVK LGR VVSE RYV A+V+RQQAYAKVLA+GM +  ++ LL QGD S+ATG + L +   G VI DNFV+G VV+ G++LME+SD S LW+EA ++ E+A+ I++G  AR+S+DE+ W+ G V Q H+R+DE+TRT  +RIE+ +D G L PGQFV  A++  A + V+AVP +AV+L+ G+ +VF  E  E  P PVE G+T  +W  + AGL  G+EI   G + LKS+LLKS IGD+D
Sbjct:    1 MGILTQTVTTRLLADEVVAPAEVTVNLYRTAEVTPRITAQIIHRHARMGERVKKGEGLITLSSVEMADAQGELLIASREWRRVKQLGRKVVSEKRYVAAQVNRQQAYAKVLAFGMTEAQVEALLKQGDVSRATGTFDLISTQAGTVISDNFVIGRVVEPGQVLMEISDESRLWVEAHLEAEVASRIKIGAPARISSDEQQWVNGKVVQIHRRMDETTRTLAVRIELESDEGGLRPGQFVKSAIALTAGKSVMAVPSEAVILLQGDYVVFKPEGEEIHPTPVERGVTRGNWTEIKAGLALGDEIVTQGAYVLKSMLLKSMIGDSD 324          
BLAST of mRNA_M-pyrifera_M_contig73625.17448.1 vs. uniprot
Match: A0A3B1CL60_9ZZZZ (Probable Co/Zn/Cd efflux system membrane fusion protein n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B1CL60_9ZZZZ)

HSP 1 Score: 338 bits (867), Expect = 6.210e-112
Identity = 178/331 (53.78%), Postives = 235/331 (71.00%), Query Frame = 1
Query:    1 SAAKRAEMGIVTAPVELHALAPEIKAPGEVALNAYRTSQVAPRIDAQVVARHSRMGNTVNAGDPVVTLSSVDVADAVGDLLVNDREWRRVKALGRDVVSEARYVIAEVSRQQAYAKVLAYGMPKTSLQRLLAQGDASQATGEYTLYAPHDGVVIQDNFVVGEVVDAGRLLMEVSDVSTLWIEARVDPELAAAIQVGDAARVSADEEIWITGTVTQRHQRVDESTRTRGIRIEVPN-DGDLAPGQFVNIAVSAGASEPVLAVPRDAVVLILGNPMVFALEDNEFEPRPVEVGMTTADWRVVTAGLESGEEIAVAGVFQLKSLLLKSQIGDTD 990
            SAA+R  MGI+T  VE   +A  + APGEV LN YR+++V PRI AQ++ RH+RMG  +  G  +VTLSSV++A+A G+LL++DREWRRVK LGR VVSE RYV A+V+RQQAYAKVLA+GM ++ +  LL QGD S A G + L +P  G VI D+FV G VV  G +LME+SD S LW+EA++ PE+A  I++ + ARVS+D++ W++G V Q H+R+DE+TRT  IRIEV + D  L PGQFV   +   A E VLAVP++A+VL+ G   VF +E +E +  PVE G T  +W  + AGL  G EI   G + LKSLLLKSQIGD+D
Sbjct:   34 SAAEREAMGILTQRVETQLMAEVVTAPGEVRLNRYRSAEVGPRITAQIIHRHARMGQIIQKGQKLVTLSSVEMAEAQGELLISDREWRRVKDLGRKVVSEKRYVSAQVTRQQAYAKVLAFGMTESQVTALLKQGDVSHARGIFDLLSPQAGTVISDDFVTGRVVPPGTVLMEISDESRLWVEAKLSPEVAVKIKLMNPARVSSDQKNWLSGKVVQIHRRIDETTRTLAIRIEVDSQDQSLRPGQFVRSLIQVSAGEAVLAVPKEALVLLSGADAVFKVEGDEIQIAPVERGETHGNWTEIKAGLRIGNEIVTQGAYVLKSLLLKSQIGDSD 364          
BLAST of mRNA_M-pyrifera_M_contig73625.17448.1 vs. uniprot
Match: A0A0S2TF04_9GAMM (HlyD_D23 domain-containing protein n=1 Tax=Candidatus Tenderia electrophaga TaxID=1748243 RepID=A0A0S2TF04_9GAMM)

HSP 1 Score: 337 bits (863), Expect = 2.670e-111
Identity = 174/328 (53.05%), Postives = 233/328 (71.04%), Query Frame = 1
Query:   10 KRAEMGIVTAPVELHALAPEIKAPGEVALNAYRTSQVAPRIDAQVVARHSRMGNTVNAGDPVVTLSSVDVADAVGDLLVNDREWRRVKALGRDVVSEARYVIAEVSRQQAYAKVLAYGMPKTSLQRLLAQGDASQATGEYTLYAPHDGVVIQDNFVVGEVVDAGRLLMEVSDVSTLWIEARVDPELAAAIQVGDAARVSADEEIWITGTVTQRHQRVDESTRTRGIRIEVPN-DGDLAPGQFVNIAVSAGASEPVLAVPRDAVVLILGNPMVFALEDNEFEPRPVEVGMTTADWRVVTAGLESGEEIAVAGVFQLKSLLLKSQIGDTD 990
            +R  MGI+T  V    +A E+ AP EV +N Y T++V PRI AQ+  RH+RMG  V  G  +VTLSSV++A+A G LL+ DREW RV+ LGR VV+E RYV AEV+RQQAYAKVLA+GM +  +  LL +GD S+ATG + L +P +G V+ D+FV+G VV+ GR+LMEVSD S LW+EA++  E+AA I+VG  ARVS+DE  W++G V Q H+ +D++TRT  +RIE+ + DG L PGQFV  A+   A +PVLAVP+++V+L+ G+ +VF  E +E  P PVE G T  +W  + AGL  G+EI   G + LKSLLLKSQIGD D
Sbjct:   39 QRQSMGILTQIVGTQLMADEVIAPAEVTVNRYHTAEVTPRITAQITQRHARMGQQVKKGQKLVTLSSVEMAEAQGQLLMADREWSRVQELGRQVVAEKRYVEAEVARQQAYAKVLAFGMTEAQVVALLEEGDVSKATGSFDLLSPQEGTVLSDDFVIGRVVEPGRVLMEVSDESRLWVEAQLAAEMAAGIEVGSPARVSSDERRWLSGKVVQIHRLMDKTTRTLAVRIELDSRDGRLRPGQFVKSAIQIVAGKPVLAVPKESVLLVQGDYVVFKTEGDEIHPAPVERGATRGNWTEIKAGLAEGDEIVTQGAYVLKSLLLKSQIGDAD 366          
BLAST of mRNA_M-pyrifera_M_contig73625.17448.1 vs. uniprot
Match: A0A7V0PLM1_9GAMM (Efflux RND transporter periplasmic adaptor subunit n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A7V0PLM1_9GAMM)

HSP 1 Score: 336 bits (861), Expect = 3.160e-110
Identity = 177/327 (54.13%), Postives = 233/327 (71.25%), Query Frame = 1
Query:    7 AKRAEMGIVTAPVELHALAPEIKAPGEVALNAYRTSQVAPRIDAQVVARHSRMGNTVNAGDPVVTLSSVDVADAVGDLLVNDREWRRVKALGRDVVSEARYVIAEVSRQQAYAKVLAYGMPKTSLQRLLAQGDASQATGEYTLYAPHDGVVIQDNFVVGEVVDAGRLLMEVSDVSTLWIEARVDPELAAAIQVGDAARVSADEEIWITGTVTQRHQRVDESTRTRGIRIEVPN-DGDLAPGQFVNIAVSAGASEPVLAVPRDAVVLILGNPMVFALEDNEFEPRPVEVGMTTADWRVVTAGLESGEEIAVAGVFQLKSLLLKSQIGD 984
            A+R   GI  A V   AL   + APGEV +NAYR++QV PR+DAQ+VARH+R+G +V  G  +VTLSSV+VA A GDL+ +DREWRRVK LGR+VVS  RYV A+V+RQ+AYA + AYGM K  +  LL  GDAS+ATGE+ L+AP DG+VI D FV GE V  GR+L E++DV T W+EA++DP  A  + VG   RVS D   WI G V Q + R++ +TRTR +RIEV N D  +  G++V++A+  G + P+LAVPRDA+VL+ G+  VF L+ +E  P+PVE G+T A W  + AGL  G+EI V GVF LKSL+LKSQ+G+
Sbjct:   91 AERRAQGIEIAKVTRRALRDVVTAPGEVHMNAYRSAQVTPRVDAQIVARHARLGESVKRGRLLVTLSSVEVAGAQGDLIESDREWRRVKKLGRNVVSAKRYVAAQVARQRAYAALRAYGMTKAQIGALLRSGDASRATGEFDLFAPQDGIVISDAFVSGEFVARGRVLFELTDVKTPWVEAQLDPRDATRVAVGAPVRVSRDGRKWIDGRVVQLYYRLNPATRTRPVRIEVSNSDVIMLAGEYVDVALRTGGAAPLLAVPRDALVLMQGSQTVFKLDGDELHPQPVETGVTRAGWTEIRAGLAQGDEIVVKGVFLLKSLVLKSQMGE 417          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig73625.17448.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C1U4N3_9GAMM1.640e-11955.93Efflux RND transporter periplasmic adaptor subunit... [more]
A0A7C1U1U3_9GAMM2.120e-11955.83Efflux RND transporter periplasmic adaptor subunit... [more]
A0A7R7GL52_9GAMM7.100e-11757.93RND transporter n=2 Tax=Thiohalobacter sp. COW1 Ta... [more]
A0A7C1THN1_9GAMM3.450e-11656.06Efflux RND transporter periplasmic adaptor subunit... [more]
A0A2E6RC81_9GAMM5.960e-11654.08Efflux transporter periplasmic adaptor subunit n=1... [more]
A0A7C1XR17_9GAMM4.550e-11455.18Efflux RND transporter periplasmic adaptor subunit... [more]
A0A7C2AFM1_9GAMM2.860e-11353.09Efflux RND transporter periplasmic adaptor subunit... [more]
A0A3B1CL60_9ZZZZ6.210e-11253.78Probable Co/Zn/Cd efflux system membrane fusion pr... [more]
A0A0S2TF04_9GAMM2.670e-11153.05HlyD_D23 domain-containing protein n=1 Tax=Candida... [more]
A0A7V0PLM1_9GAMM3.160e-11054.13Efflux RND transporter periplasmic adaptor subunit... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig73625contigM-pyrifera_M_contig73625:104..1096 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score260.0
Seed ortholog evalue1.5e-66
Seed eggNOG ortholog1198232.CYCME_1354
Preferred nameczcB
KEGG koko:K07798,ko:K09815,ko:K15727
KEGG TC2.A.6.1.4,3.A.1.15.3,3.A.1.15.5,8.A.1,8.A.1.2.1
KEGG Pathwayko02010,ko02020,map02010,map02020
KEGG ModuleM00242
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Barrel-sandwich domain of CusB or HlyD membrane-fusion
EggNOG OGs1MX8W@1224,1RPXR@1236,4627X@72273,COG0803@1,COG0803@2,COG0845@1,COG0845@2
COG Functional cat.M
Best tax levelThiotrichales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko02000
Exons1
Model size993
Cds size972
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816633.502488-CDS-M-pyrifera_M_contig73625:103..10751622816633.502488-CDS-M-pyrifera_M_contig73625:103..1075Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig73625 104..1075 -
1692278089.1953125-CDS-M-pyrifera_M_contig73625:103..10751692278089.1953125-CDS-M-pyrifera_M_contig73625:103..1075Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig73625 104..1075 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816633.5163743-UTR-M-pyrifera_M_contig73625:1075..10961622816633.5163743-UTR-M-pyrifera_M_contig73625:1075..1096Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig73625 1076..1096 -
1692278089.2088234-UTR-M-pyrifera_M_contig73625:1075..10961692278089.2088234-UTR-M-pyrifera_M_contig73625:1075..1096Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig73625 1076..1096 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig73625.17448.1prot_M-pyrifera_M_contig73625.17448.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig73625 104..1075 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig73625.17448.1

>prot_M-pyrifera_M_contig73625.17448.1 ID=prot_M-pyrifera_M_contig73625.17448.1|Name=mRNA_M-pyrifera_M_contig73625.17448.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=324bp
MGIVTAPVELHALAPEIKAPGEVALNAYRTSQVAPRIDAQVVARHSRMGN
TVNAGDPVVTLSSVDVADAVGDLLVNDREWRRVKALGRDVVSEARYVIAE
VSRQQAYAKVLAYGMPKTSLQRLLAQGDASQATGEYTLYAPHDGVVIQDN
FVVGEVVDAGRLLMEVSDVSTLWIEARVDPELAAAIQVGDAARVSADEEI
WITGTVTQRHQRVDESTRTRGIRIEVPNDGDLAPGQFVNIAVSAGASEPV
LAVPRDAVVLILGNPMVFALEDNEFEPRPVEVGMTTADWRVVTAGLESGE
EIAVAGVFQLKSLLLKSQIGDTD*
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mRNA from alignment at M-pyrifera_M_contig73625:104..1096-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig73625.17448.1 ID=mRNA_M-pyrifera_M_contig73625.17448.1|Name=mRNA_M-pyrifera_M_contig73625.17448.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=993bp|location=Sequence derived from alignment at M-pyrifera_M_contig73625:104..1096- (Macrocystis pyrifera P11B4 male)
TCCGCGGCCAAACGTGCGGAGATGGGCATCGTCACTGCCCCCGTCGAACT TCACGCCTTGGCGCCAGAGATCAAGGCGCCGGGTGAGGTCGCCCTCAACG CCTATCGGACCAGCCAGGTGGCTCCTCGCATCGACGCGCAGGTAGTGGCG CGACACTCTCGCATGGGAAACACGGTCAACGCCGGCGATCCCGTGGTCAC GTTGTCGAGCGTGGATGTGGCTGATGCCGTTGGCGATCTGTTAGTCAACG ATCGCGAGTGGCGACGGGTGAAAGCCCTCGGTCGTGACGTGGTGTCGGAG GCACGTTACGTCATTGCGGAAGTGTCACGCCAACAAGCCTACGCCAAGGT GCTCGCCTACGGCATGCCAAAAACGTCGCTCCAACGGTTGCTGGCGCAAG GCGATGCCAGCCAGGCCACCGGCGAATATACACTGTACGCCCCGCACGAT GGCGTCGTGATTCAGGATAATTTTGTGGTGGGTGAAGTCGTTGACGCTGG ACGCCTACTAATGGAAGTCAGCGATGTGTCGACGCTCTGGATTGAAGCGC GCGTGGATCCCGAACTCGCGGCGGCTATTCAAGTGGGCGATGCCGCTCGC GTGAGCGCCGATGAGGAAATCTGGATTACCGGCACAGTCACGCAACGTCA CCAACGCGTGGATGAATCGACGCGCACGCGTGGGATTCGCATTGAGGTTC CCAATGACGGTGATCTAGCACCGGGTCAGTTCGTCAATATTGCCGTCAGT GCCGGCGCCTCCGAGCCGGTCCTTGCGGTGCCGCGCGATGCTGTAGTCCT CATCCTGGGCAATCCGATGGTCTTTGCCCTGGAGGACAACGAGTTCGAGC CGCGCCCGGTTGAGGTCGGTATGACGACGGCCGATTGGCGCGTCGTGACC GCGGGACTTGAGTCTGGCGAAGAGATCGCCGTCGCCGGTGTATTCCAGCT GAAATCGCTGCTGTTGAAATCACAAATCGGCGATACCGACTAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig73625:104..1096-

>mRNA_M-pyrifera_M_contig73625.17448.1 ID=mRNA_M-pyrifera_M_contig73625.17448.1|Name=mRNA_M-pyrifera_M_contig73625.17448.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1944bp|location=Sequence derived from alignment at M-pyrifera_M_contig73625:104..1096- (Macrocystis pyrifera P11B4 male)
ATGGGCATCGTCACTGCCCCCGTCGAACTTCACGCCTTGGCGCCAGAGAT
CAAGGCGCCGGGTGAGGTCGCCCTCAACGCCTATCGGACCAGCCAGGTGG
CTCCTCGCATCGACGCGCAGGTAGTGGCGCGACACTCTCGCATGGGAAAC
ACGGTCAACGCCGGCGATCCCGTGGTCACGTTGTCGAGCGTGGATGTGGC
TGATGCCGTTGGCGATCTGTTAGTCAACGATCGCGAGTGGCGACGGGTGA
AAGCCCTCGGTCGTGACGTGGTGTCGGAGGCACGTTACGTCATTGCGGAA
GTGTCACGCCAACAAGCCTACGCCAAGGTGCTCGCCTACGGCATGCCAAA
AACGTCGCTCCAACGGTTGCTGGCGCAAGGCGATGCCAGCCAGGCCACCG
GCGAATATACACTGTACGCCCCGCACGATGGCGTCGTGATTCAGGATAAT
TTTGTGGTGGGTGAAGTCGTTGACGCTGGACGCCTACTAATGGAAGTCAG
CGATGTGTCGACGCTCTGGATTGAAGCGCGCGTGGATCCCGAACTCGCGG
CGGCTATTCAAGTGGGCGATGCCGCTCGCGTGAGCGCCGATGAGGAAATC
TGGATTACCGGCACAGTCACGCAACGTCACCAACGCGTGGATGAATCGAC
GCGCACGCGTGGGATTCGCATTGAGGTTCCCAATGACGGTGATCTAGCAC
CGGGTCAGTTCGTCAATATTGCCGTCAGTGCCGGCGCCTCCGAGCCGGTC
CTTGCGGTGCCGCGCGATGCTGTAGTCCTCATCCTGGGCAATCCGATGGT
CTTTGCCCTGGAGGACAACGAGTTCGAGCCGCGCCCGGTTGAGGTCGGTA
TGACGACGGCCGATTGGCGCGTCGTGACCGCGGGACTTGAGTCTGGCGAA
GAGATCGCCGTCGCCGGTGTATTCCAGCTGAAATCGCTGCTGTTGAAATC
ACAAATCGGCGATACCGACTAAATGGGCATCGTCACTGCCCCCGTCGAAC
TTCACGCCTTGGCGCCAGAGATCAAGGCGCCGGGTGAGGTCGCCCTCAAC
GCCTATCGGACCAGCCAGGTGGCTCCTCGCATCGACGCGCAGGTAGTGGC
GCGACACTCTCGCATGGGAAACACGGTCAACGCCGGCGATCCCGTGGTCA
CGTTGTCGAGCGTGGATGTGGCTGATGCCGTTGGCGATCTGTTAGTCAAC
GATCGCGAGTGGCGACGGGTGAAAGCCCTCGGTCGTGACGTGGTGTCGGA
GGCACGTTACGTCATTGCGGAAGTGTCACGCCAACAAGCCTACGCCAAGG
TGCTCGCCTACGGCATGCCAAAAACGTCGCTCCAACGGTTGCTGGCGCAA
GGCGATGCCAGCCAGGCCACCGGCGAATATACACTGTACGCCCCGCACGA
TGGCGTCGTGATTCAGGATAATTTTGTGGTGGGTGAAGTCGTTGACGCTG
GACGCCTACTAATGGAAGTCAGCGATGTGTCGACGCTCTGGATTGAAGCG
CGCGTGGATCCCGAACTCGCGGCGGCTATTCAAGTGGGCGATGCCGCTCG
CGTGAGCGCCGATGAGGAAATCTGGATTACCGGCACAGTCACGCAACGTC
ACCAACGCGTGGATGAATCGACGCGCACGCGTGGGATTCGCATTGAGGTT
CCCAATGACGGTGATCTAGCACCGGGTCAGTTCGTCAATATTGCCGTCAG
TGCCGGCGCCTCCGAGCCGGTCCTTGCGGTGCCGCGCGATGCTGTAGTCC
TCATCCTGGGCAATCCGATGGTCTTTGCCCTGGAGGACAACGAGTTCGAG
CCGCGCCCGGTTGAGGTCGGTATGACGACGGCCGATTGGCGCGTCGTGAC
CGCGGGACTTGAGTCTGGCGAAGAGATCGCCGTCGCCGGTGTATTCCAGC
TGAAATCGCTGCTGTTGAAATCACAAATCGGCGATACCGACTAA
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