mRNA_M-pyrifera_M_contig73542.17430.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig73542.17430.1
Unique NamemRNA_M-pyrifera_M_contig73542.17430.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig73542.17430.1 vs. uniprot
Match: A0A5A8DU53_CAFRO (Hypothetical protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DU53_CAFRO)

HSP 1 Score: 280 bits (716), Expect = 6.810e-87
Identity = 144/295 (48.81%), Postives = 204/295 (69.15%), Query Frame = 1
Query:    7 CGKGSCKFSDETLDFQVTFLVYLGALLSFVGWFLFVIYGGIGLVGLPLDLIMSFVKRPKVLTPAQVRKRKEVLRQNARNVMVECTALG----KEMVEFAGRKSVSWRERREQRAKEATDMNRVRVLVEHLEEEWEAIRLGDPRSFREFYNPIVPYVKLVGGIFGIIISLLWVIHIIVYMLIDPPAALFLNEYFNFWDTFASFIGTISIGILALYLLAAVVKGNTKLGSRFFIIKIHPMVYQETQLNSIYFNLILVLLCTLPVVQFCTEAFASYARLTDASLVFGSQMKYLRFFEY 879
            CG G+CKF    L+FQVTF+VYLG LLSFVGWFLFV+YGGIGLV LP D+ +++  RPK    A     +  L + A++V+      G    ++M E  G     + ERR QRA+    + + R+LVE LEE+  A +L D R + ++YNP++P+  L   I   +++++W++H++++M I PP   FLN+YF F+DTFASFIGT S+G+  +YLL AVVKG  K G+RF +  +HPM  + T LNS +FN+ L+L+C LPVVQFCT+AF+SYARLTDA ++FG+Q++ LRFF+Y
Sbjct:  215 CGTGTCKFEGAQLNFQVTFVVYLGGLLSFVGWFLFVLYGGIGLVALPRDMYVAWSSRPKPALHAARELTRATLSREAKDVVKSGMQYGQTMLRQMSELPG-----FMERRRQRAETTAFIAKFRILVEELEEKNYAFQLSDGRYYNQYYNPLLPWCSLAASILLALVTVVWLVHVVLFMAISPPVTPFLNDYFTFFDTFASFIGTASLGLFCMYLLFAVVKGAFKFGARFLLCAVHPMQRRRTYLNSFFFNIALLLICVLPVVQFCTQAFSSYARLTDAGVIFGAQIQNLRFFKY 504          
BLAST of mRNA_M-pyrifera_M_contig73542.17430.1 vs. uniprot
Match: A0A812JZ05_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812JZ05_9DINO)

HSP 1 Score: 280 bits (716), Expect = 2.050e-84
Identity = 144/295 (48.81%), Postives = 204/295 (69.15%), Query Frame = 1
Query:    7 CGKGSCKFSDETLDFQVTFLVYLGALLSFVGWFLFVIYGGIGLVGLPLDLIMSFVKRPKVLTPAQVRKRKEVLRQNARNVMVECTALG----KEMVEFAGRKSVSWRERREQRAKEATDMNRVRVLVEHLEEEWEAIRLGDPRSFREFYNPIVPYVKLVGGIFGIIISLLWVIHIIVYMLIDPPAALFLNEYFNFWDTFASFIGTISIGILALYLLAAVVKGNTKLGSRFFIIKIHPMVYQETQLNSIYFNLILVLLCTLPVVQFCTEAFASYARLTDASLVFGSQMKYLRFFEY 879
            CG G+CKF    L+FQVTF+VYLG LLSFVGWFLFV+YGGIGLV LP D+ +++  RPK    A     +  L + A++V+      G    ++M E  G     + ERR QRA+    + + R+LVE LEE+  A +L D R + ++YNP++P+  L   I   +++++W++H++++M I PP   FLN+YF F+DTFASFIGT S+G+  +YLL AVVKG  K G+RF +  +HPM  + T LNS +FN+ L+L+C LPVVQFCT+AF+SYARLTDA ++FG+Q++ LRFF+Y
Sbjct:  494 CGTGTCKFEGAQLNFQVTFVVYLGGLLSFVGWFLFVLYGGIGLVALPRDMYVAWSSRPKPALHAARELTRATLSREAKDVVKSGMQYGQTMLRQMSELPG-----FMERRRQRAETTAFIAKFRILVEELEEKNYAFQLSDGRYYNQYYNPLLPWCSLAASILLALVTVVWLVHVVLFMAISPPVTPFLNDYFTFFDTFASFIGTASLGLFCMYLLFAVVKGAFKFGARFLLCAVHPMQRRRTYLNSFFFNIALLLICVLPVVQFCTQAFSSYARLTDAGVIFGAQIQNLRFFKY 783          
BLAST of mRNA_M-pyrifera_M_contig73542.17430.1 vs. uniprot
Match: A0A7R9Y953_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y953_9STRA)

HSP 1 Score: 241 bits (616), Expect = 1.060e-72
Identity = 125/292 (42.81%), Postives = 200/292 (68.49%), Query Frame = 1
Query:   10 GKGSCKFSDETLDFQVTFLVYLGALLSFVGWFLFVIYGGIGLVGLPLDLIMSFVKRPKVLTPAQVRKRKEVLRQNARNVMVECTALGKEMVEFAGRKSVSWRERREQRAKEATDMNRVRVLVEHLEEEWEAIRLGDPRSFREFYNPIVPYVKLVGGIFGIIISLLWVIHIIVYMLIDPPAALFLNEYFNFWDTFASFIGTISIGILALYLLAAVVKGNTKLGSRFFIIKIHPMVYQETQLNSIYFNLILVLLCTLPVVQFCTEAFASYARLTDASLVFGSQMKYLRFFEYFF 885
            G  S   SDET++  V+F VYL AL++FVG+F FVI+GG+G+  LP+DLI+S+V RPK +   + R+ ++ +++ +++++     L KE  EFA      W E+R++R ++   +N+ + +V  LE+++E ++L      +  +NP++PY++LV G+   + SLLW++ II+++L++PPA  FLNEYF ++D F    G +S+ + ALYL+ AVVKG  K+G R F I++HPM Y  T +NS  FN+ L+LLC++PVV F TEAF++YA  TDA+ +F  Q++Y+ FF YFF
Sbjct:  192 GNASFSESDETVELPVSFPVYLIALMAFVGYFFFVIFGGVGMAALPIDLILSYVYRPKRIDQRRFREEEKGIQKRSKDLIEIAQLLKKERSEFAKSGHSMW-EKRKRRQQDTITINKFKQMVYILEQDYETLKLSFANHKK--FNPLIPYMQLVAGVLSCVFSLLWILQIILFILVEPPATAFLNEYFEWYDQFFPLFGILSVALFALYLMCAVVKGCFKIGVRCFCIELHPMKYNATYMNSFLFNIGLLLLCSIPVVHFSTEAFSAYAANTDAANIFNGQIRYMVFFTYFF 480          
BLAST of mRNA_M-pyrifera_M_contig73542.17430.1 vs. uniprot
Match: A0A7S1GBQ8_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GBQ8_9STRA)

HSP 1 Score: 236 bits (601), Expect = 1.840e-70
Identity = 130/293 (44.37%), Postives = 193/293 (65.87%), Query Frame = 1
Query:    7 CGKGSCKFSDETLDFQVTFLVYLGALLSFVGWFLFVIYGGIGLVGLPLDLIMSFVKRPKVLTPAQVRKRKEVLRQNARNVMVECTALGKEMVEFAGRKSVSWRERREQRAKEATDMNRVRVLVEHLEEEWEAIRLGDPRSFREFYNPIVPYVKLVGGIFGIIISLLWVIHIIVYMLIDPPAALFLNEYFNFWDTFASFIGTISIGILALYLLAAVVKGNTKLGSRFFIIKIHPMVYQETQLNSIYFNLILVLLCTLPVVQFCTEAFASYARLTDASLVFGSQMKYLRFFEYFF 885
            CG G C  +D  L   VTF+++L  LL+F+GWFLFVIY  IG + LP+D   +F+ R K+L+ + V   ++ L+  A  ++    AL +E  ++   +  S  +RR+QR      +N++RVLV+ LE E E +R+  P  F+   N +VP++KL+ GI   I++L W+ HI++YML+D     F+N+Y  ++D +    GT+++G+ A+YLL AV+KGN K GSRFF+IKIHPMV  +T +NS+ FNL+LVLLC LPVVQF + AF  YARLT   ++FGS +K++  F YFF
Sbjct:  185 CG-GGCTTTDHVLKMDVTFVIFLAGLLAFLGWFLFVIYASIGFIALPMDFFNAFIHRRKLLSHSAVVAYQKALQGRAEQLIAMSDALKEEWADYNSVRH-SPVDRRKQRKIHEVQLNKLRVLVDTLEGEAEDLRMSSPAEFKN-NNILVPWMKLLAGIITTILTLAWLTHIVIYMLLDETP--FINDYLIWFDGWFPLFGTLTVGVFAIYLLLAVIKGNFKFGSRFFLIKIHPMVPHKTFVNSMIFNLMLVLLCVLPVVQFASNAFRDYARLTSVDVIFGSTIKHMEGFRYFF 472          
BLAST of mRNA_M-pyrifera_M_contig73542.17430.1 vs. uniprot
Match: A0A7S2W916_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W916_9STRA)

HSP 1 Score: 219 bits (557), Expect = 3.980e-63
Identity = 117/293 (39.93%), Postives = 184/293 (62.80%), Query Frame = 1
Query:    7 CGKGSCKFSDETLDFQVTFLVYLGALLSFVGWFLFVIYGGIGLVGLPLDLIMSFVKRPKVLTPAQVRKRKEVLRQNARNVMVECTALGKEMVEFAGRKSVSWRERREQRAKEATDMNRVRVLVEHLEEEWEAIRLGDPRSFREFYNPIVPYVKLVGGIFGIIISLLWVIHIIVYMLIDPPAALFLNEYFNFWDTFASFIGTISIGILALYLLAAVVKGNTKLGSRFFIIKIHPMVYQETQLNSIYFNLILVLLCTLPVVQFCTEAFASYARLTDASLVFGSQMKYLRFFEYFF 885
            C  G     D  LD + +F  Y+ A   +VGWF+F ++GG+GL  +P DLI +FV+RP+++  +++ + K+ L+Q  ++++     + KE  E+  RK  SWRE  ++R  + T++N+ + +V  LE+++E   +         YNP++PYV L  GI   I+S+LW++ +I+Y+LIDPP + FLN +F  +D +    G +S+ + + YLL  V  G  KLG R F I +HPM Y +T +NS  FN++ +LLC +PVVQFCT+AF SYAR T    + G Q++YL+FF YFF
Sbjct:  294 CLSGCTSSDDGQLDIKTSFATYILAFTGWVGWFIFALFGGVGLAVVPFDLIAAFVRRPRLMDASELARVKQDLQQRTKHLVGLGEDIKKERQEWNSRKH-SWRESTKKRNADRTNVNKFKQMVYLLEKDFETWNISSKNVLD--YNPLMPYVSLALGILSAILSILWLLQLILYVLIDPPVSQFLNVFFMQFDQWFPLFGVLSVALFSFYLLVCVTFGLFKLGVRCFCISLHPMEYGKTLVNSFLFNVLWILLCAIPVVQFCTQAFDSYARYTTIGSLLGVQVRYLKFFRYFF 583          
BLAST of mRNA_M-pyrifera_M_contig73542.17430.1 vs. uniprot
Match: A0A7S1XYX2_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XYX2_9STRA)

HSP 1 Score: 218 bits (555), Expect = 4.970e-63
Identity = 122/289 (42.21%), Postives = 189/289 (65.40%), Query Frame = 1
Query:   19 SCKFSDETLDFQVTFLVYLGALLSFVGWFLFVIYGGIGLVGLPLDLIMSFVKRPKVLTPAQVRKRKEVLRQNARNVMVECTALGKEMVEFAGRKSVSWRERREQRAKEATDMNRVRVLVEHLEEEWEAIRLGDPRSFREFYNPIVPYVKLVGGIFGIIISLLWVIHIIVYMLIDPPAALFLNEYFNFWDTFASFIGTISIGILALYLLAAVVKGNTKLGSRFFIIKIHPMVYQETQLNSIYFNLILVLLCTLPVVQFCTEAFASYARLTDASLVFGSQMKYLRFFEYFF 885
            S + S +TL+  V+F VYL AL++FVG++ FV++GGIGL  LP+DLI+ +V RPK +   + R+ ++ +++ +++++     L KE  EFA      W ERR++R K+   +N+ + +V  LE+++E +++    +  + +NP+VPY  L+ G+   I+SLLW++ II+++L+DPP   FLNEYF ++D +    G IS+ I   YL+A VVKG  K G R F I++HPM    T +NS  FN+ L+L+C+LPVV F TEAFA YA  TD   +F  Q++YL FF  FF
Sbjct:  267 SYETSSDTLNLNVSFPVYLMALMAFVGYWFFVLFGGIGLAALPIDLILGYVYRPKRIDQKRFREEEKGIKKRSQDLIEIGQLLKKERTEFARAGHSMW-ERRKRRQKDTITVNKFKQMVFILEQDYEQLKMS--YANHKNFNPLVPYAMLLFGVISAILSLLWMLQIILFLLVDPPTTSFLNEYFAWYDKWFPLFGIISVCIFTFYLMACVVKGCFKFGVRCFCIELHPMKRNGTYMNSFLFNVGLLLICSLPVVHFATEAFADYAADTDVHNIFNVQVRYLIFFNEFF 552          
BLAST of mRNA_M-pyrifera_M_contig73542.17430.1 vs. uniprot
Match: W7U3J0_9STRA (Lmbr1-like conserved region-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U3J0_9STRA)

HSP 1 Score: 196 bits (497), Expect = 3.460e-55
Identity = 116/281 (41.28%), Postives = 167/281 (59.43%), Query Frame = 1
Query:   43 LDFQVTFLVYLGALLSFVGWFLFVIYGGIGLVGLPLDLIMSFVKRPKVLTPAQVRKRKEVLRQNARNVMVECTALGKEMVEFAGRKSVSWRERREQRAKEATDMNRVRVLVEHLEEEWEAIRLGDPRSFREFYNPIVPYVKLVGGIFGIIISLLWVIHIIVYMLIDPPAALFLNEYFNFWDTFASFIGTISIGILALYLLAAVVKGNTKLGSRFFIIKIHPMVYQETQLNSIYFNLILVLLCTLPVVQFCTEAFASYARLTDASLVFGSQMKYLRFFEYFF 885
            + FQ TF+VY+ AL+SFVGWFLF I+GG+GL  LP+DLI +F  RPK + PA+    +++L Q     ++E   L +   +    K  ++  R      E   + + + +V  LE ++E  R          YNP+ P   L+ G+   I++++WV+H+IVYM   PP + FLN+YF  +D +    G +S+ I  LYLL  VV GN KLG RF  +++HPM    T +NS  FNLIL+LLCT PVV+F T AFA YAR ++    FG Q++YL FF  F+
Sbjct:  200 ISFQSTFIVYMIALVSFVGWFLFAIFGGVGLAALPMDLITAFTTRPKPM-PAEELAHEQLLLQARVADLIEVGHLVQSERKDRRSKGGNFLARTVAERSERNTLLKFKQMVYMLESDYEKFRAAKDMGK---YNPLWPIGMLLLGMLASILTVMWVLHVIVYMFFFPPLSQFLNQYFIQFDEWFPLFGVVSVAIFVLYLLFCVVAGNFKLGVRFLCVELHPMKINGTYMNSFLFNLILILLCTFPVVEFSTSAFAGYARFSNIYHFFGVQIRYLIFFSIFY 476          
BLAST of mRNA_M-pyrifera_M_contig73542.17430.1 vs. uniprot
Match: A0A7S2LEH6_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LEH6_9STRA)

HSP 1 Score: 190 bits (483), Expect = 5.290e-54
Identity = 110/283 (38.87%), Postives = 164/283 (57.95%), Query Frame = 1
Query:   37 ETLDFQVTFLVYLGALLSFVGWFLFVIYGGIGLVGLPLDLIMSFVKRPKVLTPAQVRKRKEVLRQNARNVMVECTALGKEMVEFAGR-KSVSWRERREQRAKEATDMNRVRVLVEHLEEEWEAIRLGDPRSFREFYNPIVPYVKLVGGIFGIIISLLWVIHIIVYMLIDPPAALFLNEYFNFWDTFASFIGTISIGILALYLLAAVVKGNTKLGSRFFIIKIHPMVYQETQLNSIYFNLILVLLCTLPVVQFCTEAFASYARLTDASLVFGSQMKYLRFFEYF 882
             T++  +    +   L++++GWFLF  +GGIG+  LPLDLI++FV RP  +   +  + +  LR     ++     L  E  E A + + + WRERR+  A+E     + +  V  +EE+ E        ++R  YNP++P   L+GGI  ++ISL WV+ II+YML  PP   FLNEYF +++T+ +  G +S+ I + YLL   VKG  K G RF   ++HPM   +T ++S  FN+ LVLLC LPVVQF   AF  YAR T  +  F  Q+ YL+FF +F
Sbjct:  101 STMELSINPATFYAGLMAWLGWFLFACFGGIGMAALPLDLILAFVNRPHHMDAVEFAEAQRSLRDRVNELVNVGELLKIEQEENAQKYEKMGWRERRKAMAEEKKTWIKFKQAVYLMEEDAEDFA-NCTANYRN-YNPLIPIFSLLGGILALLISLCWVLQIILYMLPTPPVTPFLNEYFRWFETWFNLFGVLSVAIFSFYLLICAVKGCFKFGLRFLFFQVHPMKLNKTYMSSFLFNIGLVLLCALPVVQFSASAFQDYARYTTVNQTFNVQLYYLKFFGWF 381          
BLAST of mRNA_M-pyrifera_M_contig73542.17430.1 vs. uniprot
Match: H6WB98_VAULI (Uncharacterized protein n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB98_VAULI)

HSP 1 Score: 192 bits (488), Expect = 7.620e-54
Identity = 108/285 (37.89%), Postives = 176/285 (61.75%), Query Frame = 1
Query:   31 SDETLDFQVTFLVYLGALLSFVGWFLFVIYGGIGLVGLPLDLIMSFVKRPKVLTPAQVRKRKEVLRQNARNVMVECTALGKEMVEFAGRKSVSWRERREQRAKEATDMNRVRVLVEHLEEEWEAIRLGDPRSFREFYNPIVPYVKLVGGIFGIIISLLWVIHIIVYMLIDPPAALFLNEYFNFWDTFASFIGTISIGILALYLLAAVVKGNTKLGSRFFIIKIHPMVYQETQLNSIYFNLILVLLCTLPVVQFCTEAFASYARLTDASLVFGSQMKYLRFFEYFF 885
            S +T+   V+F ++L A+L+F+GWFLF  + G+G+ G+ +DLI  F+ RPK L   Q+   +  +++  + ++   T L ++  + +  +S    ++ + RA +  + NR + +V  LEE+++   L   +++   YNP+ P   L  GI   II LLW++H+I+YMLIDPPA  FLNEYFN++D +    GT+S+ I + YLLAA +KG  K G R     +HPM   ET +NS  FN+ ++LLC    +QFC +AF+SYA   + + +   Q++YLRFF++F+
Sbjct:  195 SQDTIRLNVSFGLFLLAILAFIGWFLFAAFAGLGIPGISIDLIREFLNRPKRLDRGQISALEMAVQRRCKELVEIGTMLKQKRAQSSQIRSNYLSKQIKSRA-DNKEFNRFKQMVYVLEEDFDQFVLC--KAYSTKYNPLKPIFWLCVGIVSAIIGLLWILHMILYMLIDPPATNFLNEYFNWFDQWFPLFGTVSVAIFSAYLLAAAIKGCFKFGLRIVWFTLHPMKINETYMNSFLFNVGIILLCVPAAIQFCVQAFSSYAVSAEINNILNVQVRYLRFFQFFY 476          
BLAST of mRNA_M-pyrifera_M_contig73542.17430.1 vs. uniprot
Match: F0YMP9_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YMP9_AURAN)

HSP 1 Score: 185 bits (469), Expect = 8.620e-53
Identity = 119/285 (41.75%), Postives = 169/285 (59.30%), Query Frame = 1
Query:   31 SDETLDFQVTFLVYLGALLSFVGWFLFVIYGGIGLVGLPLDLIMSFVKRPKVLTPAQVRKRKEVLRQNARNVMVECTALGKEMVEFAGRKSVSWRERREQRAKEATDMNRVRVLVEHLEEEWEAIRLGDPRSFREFYNPIVPYVKLVGGIFGIIISLLWVIHIIVYMLIDPPAALFLNEYFNFWDTFASFIGTISIGILALYLLAAVVKGNTKLGSRFFIIKIHPMVYQETQLNSIYFNLILVLLCTLPVVQFCTEAFASYARLTDASLVFGSQMKYLRFFEYFF 885
            S +T+ F V FL YL A  S+VGWFLFV++GGIGL  LP+DLI+++V RP    P   R+  E   Q  + V         E+++  G+     R RR Q A++   +N+   +V  LE E E + +   R+  + Y P+V    L+ G+   + SLLWV+HIIVYML+DP    FLN+Y   + ++    G+++  +   YLL A +KG  K G+RFF+IK+HPM Y  T LNS  FN+ L  +C  PVVQFCT AFA YAR +DA+  F   +K+L FF+ F+
Sbjct:   15 SSDTIVFGVNFLDYLAAFFSWVGWFLFVLWGGIGLACLPIDLILAYVYRP---VPMDAREIAEYKLQIQKRVA--------ELIDVGGQLQGE-RARRGQNARDQVKVNKFAQMVFILETEVEELEIISGRA--KDYEPLVYVGYLLLGVVAAVHSLLWVVHIIVYMLVDPAPTPFLNDYLIQFSSWYPLFGSLACALFTFYLLCATMKGCLKFGTRFFLIKLHPMKYNGTYLNSFLFNVGLFGICAFPVVQFCTAAFADYARFSDAATRF-IVVKHLVFFKSFY 284          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig73542.17430.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8DU53_CAFRO6.810e-8748.81Hypothetical protein n=3 Tax=Cafeteria roenbergens... [more]
A0A812JZ05_9DINO2.050e-8448.81Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 ... [more]
A0A7R9Y953_9STRA1.060e-7242.81Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S1GBQ8_9STRA1.840e-7044.37Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A7S2W916_9STRA3.980e-6339.93Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S1XYX2_9STRA4.970e-6342.21Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
W7U3J0_9STRA3.460e-5541.28Lmbr1-like conserved region-containing protein n=2... [more]
A0A7S2LEH6_9STRA5.290e-5438.87Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
H6WB98_VAULI7.620e-5437.89Uncharacterized protein n=1 Tax=Vaucheria litorea ... [more]
F0YMP9_AURAN8.620e-5341.75Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig73542contigM-pyrifera_M_contig73542:210..1094 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score182.2
Seed ortholog evalue3.6e-43
Seed eggNOG ortholog653948.CCA16794
KEGG koko:K14617
KEGG Pathwayko04977,map04977
Hectar predicted targeting categorysignal anchor
GOsGO:0005575,GO:0005623,GO:0005886,GO:0005911,GO:0009506,GO:0016020,GO:0030054,GO:0044464,GO:0055044,GO:0071944
EggNOG free text desc.LMBR1-like membrane protein
EggNOG OGs28H7Y@1,2QPKQ@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Exons1
Model size885
Cds size885
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816632.641666-CDS-M-pyrifera_M_contig73542:209..10941622816632.641666-CDS-M-pyrifera_M_contig73542:209..1094Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig73542 210..1094 +
1692278088.7851179-CDS-M-pyrifera_M_contig73542:209..10941692278088.7851179-CDS-M-pyrifera_M_contig73542:209..1094Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig73542 210..1094 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig73542.17430.1prot_M-pyrifera_M_contig73542.17430.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig73542 210..1094 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig73542.17430.1

>prot_M-pyrifera_M_contig73542.17430.1 ID=prot_M-pyrifera_M_contig73542.17430.1|Name=mRNA_M-pyrifera_M_contig73542.17430.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=295bp
MNCGKGSCKFSDETLDFQVTFLVYLGALLSFVGWFLFVIYGGIGLVGLPL
DLIMSFVKRPKVLTPAQVRKRKEVLRQNARNVMVECTALGKEMVEFAGRK
SVSWRERREQRAKEATDMNRVRVLVEHLEEEWEAIRLGDPRSFREFYNPI
VPYVKLVGGIFGIIISLLWVIHIIVYMLIDPPAALFLNEYFNFWDTFASF
IGTISIGILALYLLAAVVKGNTKLGSRFFIIKIHPMVYQETQLNSIYFNL
ILVLLCTLPVVQFCTEAFASYARLTDASLVFGSQMKYLRFFEYFF
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mRNA from alignment at M-pyrifera_M_contig73542:210..1094+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig73542.17430.1 ID=mRNA_M-pyrifera_M_contig73542.17430.1|Name=mRNA_M-pyrifera_M_contig73542.17430.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=885bp|location=Sequence derived from alignment at M-pyrifera_M_contig73542:210..1094+ (Macrocystis pyrifera P11B4 male)
ATGAATTGTGGCAAAGGGTCTTGTAAATTCAGTGATGAGACGTTGGATTT CCAAGTCACCTTCTTGGTTTACCTCGGAGCACTCCTTTCTTTTGTGGGTT GGTTCCTCTTTGTGATTTATGGTGGAATTGGACTCGTTGGTCTTCCACTT GATCTTATCATGTCTTTTGTCAAGCGACCAAAGGTTCTTACTCCAGCACA AGTTCGCAAGCGAAAAGAAGTCTTGCGGCAAAATGCAAGAAACGTCATGG TGGAATGCACTGCCTTAGGAAAGGAGATGGTCGAGTTTGCAGGACGAAAG AGCGTGTCATGGAGGGAGCGTCGCGAGCAGCGAGCCAAGGAGGCAACGGA TATGAACCGGGTGCGTGTGCTTGTAGAGCACTTGGAGGAAGAATGGGAAG CCATTCGACTAGGTGATCCAAGGTCTTTTCGTGAATTCTACAACCCCATC GTTCCGTATGTCAAACTTGTTGGAGGCATTTTTGGAATCATCATTTCATT GTTATGGGTCATCCACATTATTGTCTACATGCTCATCGATCCTCCAGCAG CACTCTTCCTCAACGAGTACTTTAACTTTTGGGACACTTTTGCATCCTTT ATCGGCACCATTTCCATTGGCATCCTTGCACTTTATCTCCTTGCTGCTGT TGTCAAAGGAAACACAAAACTTGGAAGCAGATTCTTCATCATCAAAATCC ATCCCATGGTCTACCAAGAAACACAACTCAACTCCATCTACTTCAACCTT ATCCTTGTTCTTCTTTGCACACTTCCCGTTGTACAATTCTGCACAGAAGC CTTTGCATCGTATGCTCGCTTGACAGATGCATCCCTTGTCTTTGGAAGCC AGATGAAGTACCTTCGATTCTTTGAATACTTTTTC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig73542:210..1094+

>mRNA_M-pyrifera_M_contig73542.17430.1 ID=mRNA_M-pyrifera_M_contig73542.17430.1|Name=mRNA_M-pyrifera_M_contig73542.17430.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1770bp|location=Sequence derived from alignment at M-pyrifera_M_contig73542:210..1094+ (Macrocystis pyrifera P11B4 male)
ATGAATTGTGGCAAAGGGTCTTGTAAATTCAGTGATGAGACGTTGGATTT
CCAAGTCACCTTCTTGGTTTACCTCGGAGCACTCCTTTCTTTTGTGGGTT
GGTTCCTCTTTGTGATTTATGGTGGAATTGGACTCGTTGGTCTTCCACTT
GATCTTATCATGTCTTTTGTCAAGCGACCAAAGGTTCTTACTCCAGCACA
AGTTCGCAAGCGAAAAGAAGTCTTGCGGCAAAATGCAAGAAACGTCATGG
TGGAATGCACTGCCTTAGGAAAGGAGATGGTCGAGTTTGCAGGACGAAAG
AGCGTGTCATGGAGGGAGCGTCGCGAGCAGCGAGCCAAGGAGGCAACGGA
TATGAACCGGGTGCGTGTGCTTGTAGAGCACTTGGAGGAAGAATGGGAAG
CCATTCGACTAGGTGATCCAAGGTCTTTTCGTGAATTCTACAACCCCATC
GTTCCGTATGTCAAACTTGTTGGAGGCATTTTTGGAATCATCATTTCATT
GTTATGGGTCATCCACATTATTGTCTACATGCTCATCGATCCTCCAGCAG
CACTCTTCCTCAACGAGTACTTTAACTTTTGGGACACTTTTGCATCCTTT
ATCGGCACCATTTCCATTGGCATCCTTGCACTTTATCTCCTTGCTGCTGT
TGTCAAAGGAAACACAAAACTTGGAAGCAGATTCTTCATCATCAAAATCC
ATCCCATGGTCTACCAAGAAACACAACTCAACTCCATCTACTTCAACCTT
ATCCTTGTTCTTCTTTGCACACTTCCCGTTGTACAATTCTGCACAGAAGC
CTTTGCATCGTATGCTCGCTTGACAGATGCATCCCTTGTCTTTGGAAGCC
AGATGAAGTACCTTCGATTCTTTGAATACTTTTTCATGAATTGTGGCAAA
GGGTCTTGTAAATTCAGTGATGAGACGTTGGATTTCCAAGTCACCTTCTT
GGTTTACCTCGGAGCACTCCTTTCTTTTGTGGGTTGGTTCCTCTTTGTGA
TTTATGGTGGAATTGGACTCGTTGGTCTTCCACTTGATCTTATCATGTCT
TTTGTCAAGCGACCAAAGGTTCTTACTCCAGCACAAGTTCGCAAGCGAAA
AGAAGTCTTGCGGCAAAATGCAAGAAACGTCATGGTGGAATGCACTGCCT
TAGGAAAGGAGATGGTCGAGTTTGCAGGACGAAAGAGCGTGTCATGGAGG
GAGCGTCGCGAGCAGCGAGCCAAGGAGGCAACGGATATGAACCGGGTGCG
TGTGCTTGTAGAGCACTTGGAGGAAGAATGGGAAGCCATTCGACTAGGTG
ATCCAAGGTCTTTTCGTGAATTCTACAACCCCATCGTTCCGTATGTCAAA
CTTGTTGGAGGCATTTTTGGAATCATCATTTCATTGTTATGGGTCATCCA
CATTATTGTCTACATGCTCATCGATCCTCCAGCAGCACTCTTCCTCAACG
AGTACTTTAACTTTTGGGACACTTTTGCATCCTTTATCGGCACCATTTCC
ATTGGCATCCTTGCACTTTATCTCCTTGCTGCTGTTGTCAAAGGAAACAC
AAAACTTGGAAGCAGATTCTTCATCATCAAAATCCATCCCATGGTCTACC
AAGAAACACAACTCAACTCCATCTACTTCAACCTTATCCTTGTTCTTCTT
TGCACACTTCCCGTTGTACAATTCTGCACAGAAGCCTTTGCATCGTATGC
TCGCTTGACAGATGCATCCCTTGTCTTTGGAAGCCAGATGAAGTACCTTC
GATTCTTTGAATACTTTTTC
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