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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Hectar predicted targeting category | other localisation |
Exons | 1 |
Model size | 538 |
Cds size | 330 |
Stop | 1 |
Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816630.8725746-UTR-M-pyrifera_M_contig73353:12..199 | 1622816630.8725746-UTR-M-pyrifera_M_contig73353:12..199 | Macrocystis pyrifera P11B4 male | UTR | M-pyrifera_M_contig73353 13..199 + |
1692278087.7366168-UTR-M-pyrifera_M_contig73353:12..199 | 1692278087.7366168-UTR-M-pyrifera_M_contig73353:12..199 | Macrocystis pyrifera P11B4 male | UTR | M-pyrifera_M_contig73353 13..199 + |
1622816630.9008899-UTR-M-pyrifera_M_contig73353:529..550 | 1622816630.9008899-UTR-M-pyrifera_M_contig73353:529..550 | Macrocystis pyrifera P11B4 male | UTR | M-pyrifera_M_contig73353 530..550 + |
1692278087.7591028-UTR-M-pyrifera_M_contig73353:529..550 | 1692278087.7591028-UTR-M-pyrifera_M_contig73353:529..550 | Macrocystis pyrifera P11B4 male | UTR | M-pyrifera_M_contig73353 530..550 + |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816630.8862064-CDS-M-pyrifera_M_contig73353:199..529 | 1622816630.8862064-CDS-M-pyrifera_M_contig73353:199..529 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig73353 200..529 + |
1692278087.7494256-CDS-M-pyrifera_M_contig73353:199..529 | 1692278087.7494256-CDS-M-pyrifera_M_contig73353:199..529 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig73353 200..529 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig73353.17400.1 >prot_M-pyrifera_M_contig73353.17400.1 ID=prot_M-pyrifera_M_contig73353.17400.1|Name=mRNA_M-pyrifera_M_contig73353.17400.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=110bp
MANSISTQINEQFGNAEELNYARSKRRQVLLCRGERREEKRSLACLLVAT AIAMVQNARMPLTVKIKPPTSYELESKSDGLKNTEVSPTHPSIHPCMRAS SSVLLLAIQ* back to topmRNA from alignment at M-pyrifera_M_contig73353:13..550+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_M-pyrifera_M_contig73353.17400.1 ID=mRNA_M-pyrifera_M_contig73353.17400.1|Name=mRNA_M-pyrifera_M_contig73353.17400.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=538bp|location=Sequence derived from alignment at M-pyrifera_M_contig73353:13..550+ (Macrocystis pyrifera P11B4 male) GTCCTCTCTCGCCTGTTACGGCGTTATTATTTGTAGCACGTGTCCCTTCG
TATCAACGGTAGACCGTCATCCTTGCTGGTGGATGTACCGGAGTTCGAAT
CTCGGCTGGTGTGTTTTATTTACACACTATTAATAGTGTTTTTTTTCTGA
GTTTTCTTCCGATGGCGAAAGTGCGAGACTGCGCGAGATGGCAAACTCGA
TATCGACCCAAATCAACGAGCAGTTTGGGAATGCTGAAGAACTCAACTAT
GCGCGATCCAAACGAAGGCAGGTACTGCTGTGCCGGGGGGAGAGAAGGGA
AGAAAAACGTTCGCTCGCTTGCTTGCTTGTGGCCACGGCTATTGCTATGG
TCCAGAACGCCAGAATGCCGCTGACGGTCAAAATTAAACCTCCCACGAGT
TACGAGCTGGAAAGTAAAAGCGATGGTCTAAAAAATACGGAAGTGAGCCC
CACGCATCCATCCATCCATCCATGCATGCGTGCGTCATCGTCCGTGTTGC
TGCTTGCAATACAGTAGTGGCACCAACAACCGAGCTAG back to topCoding sequence (CDS) from alignment at M-pyrifera_M_contig73353:13..550+ >mRNA_M-pyrifera_M_contig73353.17400.1 ID=mRNA_M-pyrifera_M_contig73353.17400.1|Name=mRNA_M-pyrifera_M_contig73353.17400.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=660bp|location=Sequence derived from alignment at M-pyrifera_M_contig73353:13..550+ (Macrocystis pyrifera P11B4 male) ATGGCAAACTCGATATCGACCCAAATCAACGAGCAGTTTGGGAATGCTGA AGAACTCAACTATGCGCGATCCAAACGAAGGCAGGTACTGCTGTGCCGGG GGGAGAGAAGGGAAGAAAAACGTTCGCTCGCTTGCTTGCTTGTGGCCACG GCTATTGCTATGGTCCAGAACGCCAGAATGCCGCTGACGGTCAAAATTAA ACCTCCCACGAGTTACGAGCTGGAAAGTAAAAGCGATGGTCTAAAAAATA CGGAAGTGAGCCCCACGCATCCATCCATCCATCCATGCATGCGTGCGTCA TCGTCCGTGTTGCTGCTTGCAATACAGTAGATGGCAAACTCGATATCGAC CCAAATCAACGAGCAGTTTGGGAATGCTGAAGAACTCAACTATGCGCGAT CCAAACGAAGGCAGGTACTGCTGTGCCGGGGGGAGAGAAGGGAAGAAAAA CGTTCGCTCGCTTGCTTGCTTGTGGCCACGGCTATTGCTATGGTCCAGAA CGCCAGAATGCCGCTGACGGTCAAAATTAAACCTCCCACGAGTTACGAGC TGGAAAGTAAAAGCGATGGTCTAAAAAATACGGAAGTGAGCCCCACGCAT CCATCCATCCATCCATGCATGCGTGCGTCATCGTCCGTGTTGCTGCTTGC AATACAGTAG back to top
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