mRNA_M-pyrifera_M_contig73350.17398.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig73350.17398.1
Unique NamemRNA_M-pyrifera_M_contig73350.17398.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig73350.17398.1 vs. uniprot
Match: A0A1X7UD88_AMPQE (Uncharacterized protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7UD88_AMPQE)

HSP 1 Score: 228 bits (580), Expect = 3.120e-69
Identity = 118/277 (42.60%), Postives = 166/277 (59.93%), Query Frame = 1
Query:   31 ALCLDGTPGGFYFYEGRGEQGKIWVLHLEGGGWCVDEEDCKGRAKTPIGSSSSWPMSGCPEMDGSDAGMFSNSSAINPDFANATKIHLNYCDGASYAGNV---TEVVDGELHFRGALILTELFRALQELGLGEAEALIVKGTSAGGLGTYLHIDRIRQTLVPPGVKVVGMPGAGMFLDLPAWTGKPSYTPHYQYIANMQNVWGFVDDDCIAHYS-TEERWKCFMAPYTLPFITTDLFISNSLTDAWQAANILQLDCIHNGQLQNCTAQELEAIKNFS 849
            ALCLDG+P G+Y  +G G     W+LHL+GGGWC D++DC   +KT +GSS +WP          ++G+ S     NPDF     +H+ YCDGASY+G V    +V    ++FRG  IL  + ++L++ G+  AE +I+ G SAGGL  +LH DR++  L+P  VK   +P AG F+D P   G       Y  + NMQN  G VD DCIA YS + + WKCFMA YT P+I++  F  +SLTD WQ  NI++LDC+      +CTA +++    F+
Sbjct:   33 ALCLDGSPPGYYIRKGFGSGVNKWILHLQGGGWCYDKDDCLKWSKTDLGSSKNWPQKA--PYTYLNSGLLSYLKTKNPDFYEWNVVHVQYCDGASYSGYVESPVQVSGTSIYFRGIKILEAIIQSLKDGGMNSAEEVILTGCSAGGLAAFLHADRVKS-LLPRSVKYRVLPDAGYFIDAPNVDGDMHIRSVYTNLFNMQNCSGGVDQDCIAAYSGSNDAWKCFMAQYTYPYISSPTFTLHSLTDTWQLENIVELDCLP----PSCTATQMKEFYKFT 302          
BLAST of mRNA_M-pyrifera_M_contig73350.17398.1 vs. uniprot
Match: A0A6B2L7E7_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L7E7_9EUKA)

HSP 1 Score: 225 bits (573), Expect = 2.720e-68
Identity = 131/290 (45.17%), Postives = 174/290 (60.00%), Query Frame = 1
Query:   16 DASS-GALCLDGTPGGFYFYEGRGEQGKIWVLHLEGGGWCVDEEDCKGRAKTPIGSSSSWPMSGCPEMDGSDAGMFSNSSAINPDFANATKIHLNYCDGASYAGNVTE--VVDGE-LHFRGALILTELFR-ALQELGLGEAEALIVKGTSAGGLGTYLHIDRIRQTLVPPGVKVVGMPGAGMFLDLPAWTGKPSYTPHYQYIANMQNVWGFVDDDCIAHYSTEERWKCFMAPYTLPFITTDLFISNSLTDAWQAANILQL--------DCIHNGQLQNCTAQELEAIKNF 846
            D+SS GALCLDG+P G Y  +G  ++   WV+H++GGGWC DE DC GR+KT +GSS +WP           +G+FS    INPDF N T+I L YCDGAS++G V +  +V+GE L+FRG ++L E F   L   GLG+A+ +I+ GTSAGGL TY HID +   L  P  +VVG+P AG F+D+P   G       YQ +  MQN+ G +D  CI  Y +   W+CF       FI T LFI N+  D WQ  NIL          DCI NG+ Q CT++++ A + F
Sbjct:    3 DSSSLGALCLDGSPYGVYVSKGLADK---WVIHIQGGGWCYDEADCLGRSKTILGSSKTWPTILPNNFIDDTSGIFSADPNINPDFYNWTRIWLPYCDGASFSGYVGDPVIVNGESLYFRGKIVLKESFNYLLVSEGLGKAKEVIITGTSAGGLATYFHIDELASQL--PNARVVGLPDAGYFMDIPDVKGNYWIRSLYQNVLKMQNMTGSLDQGCITKYPSS-NWECFFPAIYYQFIKTPLFIINTPYDTWQLGNILAPNGDGIDWNDCI-NGK-QPCTSEQVAAFQKF 284          
BLAST of mRNA_M-pyrifera_M_contig73350.17398.1 vs. uniprot
Match: A0A1X7UEM4_AMPQE (Uncharacterized protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7UEM4_AMPQE)

HSP 1 Score: 221 bits (564), Expect = 8.520e-67
Identity = 121/286 (42.31%), Postives = 166/286 (58.04%), Query Frame = 1
Query:    1 KLHLFDASSGALCLDGTPGGFYFYEGRGEQGKIWVLHLEGGGWCVDEEDCKGRAKTPIGSSSSWPMSGCPEMDGSDAGMFSNSSAINPDFANATKIHLNYCDGASYAGNVTEVVD---GELHFRGALILTELFRALQELGLGEAEALIVKGTSAGGLGTYLHIDRIRQTLVPPGVKVVGMPGAGMFLDLPAWTGKPSYTPHYQYIANMQNVWGFVDDDCIAHY-STEERWKCFMAPYTLPFITTDLFISNSLTDAWQAANILQLDCIHNGQLQNCTAQELEAIKNF 846
            KL L +    A+CLDG+P G+YF +G G     WV+HL+GG WC +++DC  R+++ +GSS  WP      M  ++AGMFS+S   NPDF N     + YCDGAS+AG V + V     +++FRG  IL  + ++L   G+  A+  I+ G SAGGL TYLH D IR  L PP VK   +  AG F+D P   G       ++ +  +QN  G VD DCIA Y ST E WKCFMA YT  +I++ +F  NS+ D WQ  NIL + C+       CT  +++   NF
Sbjct:   24 KLVLIENPGEAVCLDGSPPGYYFRKGFGSGVNSWVVHLQGGAWCYNKKDCLARSRSYLGSSRDWPQI----MIFNNAGMFSDSKEKNPDFYNWNMAQVQYCDGASFAGYVEKPVKVHGTDIYFRGFKILQAIIQSLMSKGMKNAQEFILTGCSAGGLATYLHADYIRS-LFPPSVKYRAISDAGYFIDAPNKHGFKYMRYLFKNVFYLQNCSGGVDQDCIAAYESTHETWKCFMAQYTYRYISSPIFTLNSMNDIWQLKNILGIKCLP----PKCTESDMKHFYNF 300          
BLAST of mRNA_M-pyrifera_M_contig73350.17398.1 vs. uniprot
Match: A0A1X7UMA3_AMPQE (Uncharacterized protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7UMA3_AMPQE)

HSP 1 Score: 220 bits (560), Expect = 2.870e-66
Identity = 119/276 (43.12%), Postives = 155/276 (56.16%), Query Frame = 1
Query:   31 ALCLDGTPGGFYFYEGRGEQGKIWVLHLEGGGWCVDEEDCKGRAKTPIGSSSSWPMSGCPEMDGSDAGMFSNSSAINPDFANATKIHLNYCDGASYAGNVTEVVD---GELHFRGALILTELFRALQELGLGEAEALIVKGTSAGGLGTYLHIDRIRQTLVPPGVKVVGMPGAGMFLDLPAWTGKPSYTPHYQYIANMQNVWGFVDDDCIAHY-STEERWKCFMAPYTLPFITTDLFISNSLTDAWQAANILQLDCIHNGQLQNCTAQELEAIKNF 846
            A+CLDG+P G+YF +G G     W++HL+GGGWC DEE C  R+KT IGSS  W     P  D    G+ S+    NPDF     + +NYCDGAS+AG V + VD     ++FRG  IL  + +++   G+  A+ +I+ G SAGGL TYLH D +  +L+PP VK   +  AG F+D P   G       Y Y+ NMQ     V+  CI  Y +T E WKCFMA YT P I+   F  NS  D WQ ANILQL C        CT  ++E  + F
Sbjct:   35 AVCLDGSPPGYYFRKGTGAGADNWIVHLQGGGWCYDEEACLERSKTDIGSSKKWK----PTED--FGGLLSDDPTQNPDFYQWNMVRINYCDGASFAGYVDKAVDVSGTSIYFRGYKILQTILQSVMSKGMSNAKEVILTGCSAGGLATYLHADYV-MSLLPPTVKYHAIADAGYFIDAPDVNGDMHIRGLYTYVFNMQKCSDGVNQKCIEAYKATNETWKCFMAQYTYPHISAPFFSLNSQVDTWQLANILQLGCTP----PRCTPTQMEQFEKF 299          
BLAST of mRNA_M-pyrifera_M_contig73350.17398.1 vs. uniprot
Match: A0A1X7UMP5_AMPQE (Uncharacterized protein n=2 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7UMP5_AMPQE)

HSP 1 Score: 213 bits (541), Expect = 2.180e-63
Identity = 115/285 (40.35%), Postives = 164/285 (57.54%), Query Frame = 1
Query:    4 LHLFDASSGALCLDGTPGGFYFYEGRGEQGKIWVLHLEGGGWCVDEEDCKGRAKTPIGSSSSWPMSGCPEMDGSDAGMFSNSSAINPDFANATKIHLNYCDGASYAGNVTEVVDGE---LHFRGALILTELFRALQELGLGEAEALIVKGTSAGGLGTYLHIDRIRQTLVPPGVKVVGMPGAGMFLDLPAWTGKPSYTPHYQYIANMQNVWGFVDDDCIAHYS-TEERWKCFMAPYTLPFITTDLFISNSLTDAWQAANILQLDCIHNGQLQNCTAQELEAIKNF 846
            L L   S  A+CLDG+P G+Y+  G G     W+LHLEGGGWC +E++C  R+K  +GSS +W  +       S +G  S+    NPDF     + L YCDGAS+AG V E V+ +   ++FRG  IL  + +++ + G+  A+ +I+ G SAGGL TY+H + ++  L+ P VK   +  AG F+D P   G+      Y  + NMQN    V+ DCIA Y  T E WKCFMA YT P I++ +F  NS  D WQ   IL+L+C    +  NCT ++++   NF
Sbjct:   28 LVLLHDSGEAVCLDGSPPGYYYRPGVGADANNWILHLEGGGWCPNEDNCLDRSKGTLGSSKNWTQTT------SFSGFLSDEQEYNPDFYQWNVVFLKYCDGASFAGYVAEPVNVKGTNIYFRGFKILQLILQSVMDKGMSNAKEVILTGCSAGGLATYIHTNYVKS-LLSPTVKFHAIADAGYFIDAPDVNGEWYIRTFYSDVFNMQNCSDGVNQDCIAAYKGTNETWKCFMAQYTYPHISSPIFSFNSQVDTWQLVAILKLEC----KPPNCTEEQMKQFFNF 301          
BLAST of mRNA_M-pyrifera_M_contig73350.17398.1 vs. uniprot
Match: A0A6P4Z3S5_BRABE (pectin acetylesterase 11-like n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4Z3S5_BRABE)

HSP 1 Score: 198 bits (504), Expect = 5.980e-57
Identity = 113/262 (43.13%), Postives = 145/262 (55.34%), Query Frame = 1
Query:   22 SSGALCLDGTPGGFYFYEGRGEQGKIWVLHLEGGGWCVDEEDCKGRAKTPIGSSS----SWPMSGCPEMDGSDAGMFSNSSAINPDFANATKIHLNYCDGASYAGNVTEVVDGE---LHFRGALILTELFRALQELGLGEAEALIVKGTSAGGLGTYLHIDRIRQTLVPPGVKVVGMPGAGMFLDLPAWTGKPSYTPHYQYIANMQNVWGFVDDDCIAHYSTEERWKCFMAPYTLPFITTDLFISNSLTDAWQAANILQLDC 786
            S GA+CLDGTP G+Y   G  +  K W+++LEGGGWC D  DC  R+ T  GSS     ++P  G          + SNS A+NP+F N     L YCDGAS+AGN T+V   E   L+FRG  IL  L   L   GL +A+ +I+ G SAGGL   LH D ++ T +P GVK   +P AG F D+   TG       YQ   NMQN  G VD DCI   + E +W+C+MA Y   ++ T +FI+NS  D W    I  L C
Sbjct:   98 SQGAVCLDGTPPGYYLRRGTDKGSKNWIIYLEGGGWCWDVADCSRRSLTDYGSSKYFRWNFPFDG----------ILSNSPAVNPNFYNWNVAMLKYCDGASFAGNRTDVAVHEGKPLYFRGRRILQALLDHLMSHGLDKAQRVILSGVSAGGLAVMLHADYVK-TRLPAGVKYHALPDAGFFPDIKNITGHDHIRILYQRSFNMQNCAGGVDADCIKDKTEETQWQCYMAQYAYKYVQTPMFITNSGYDYWSLWFIYNLRC 348          
BLAST of mRNA_M-pyrifera_M_contig73350.17398.1 vs. uniprot
Match: UPI00021A526D (pectin acetylesterase 5-like n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=UPI00021A526D)

HSP 1 Score: 194 bits (494), Expect = 2.110e-56
Identity = 106/285 (37.19%), Postives = 154/285 (54.04%), Query Frame = 1
Query:    1 KLHLFDASSGALCLDGTPGGFYFYEGRGEQGKIWVLHLEGGGWCVDEEDCKGRAKTPIGSSSSWPMSGCPEMDGSDAGMFSNSSAINPDFANATKIHLNYCDGASYAGNVTEVVD---GELHFRGALILTELFRALQELGLGEAEALIVKGTSAGGLGTYLHIDRIRQTLVPPGVKVVGMPGAGMFLDLPAWTGKPSYTPHYQYIANMQNVWGFVDDDCIAHYSTEERWKCFMAPYTLPFITTDLFISNSLTDAWQAANILQLDCIHNGQLQNCTAQELEAIKNF 846
             L L D    A+CLDG+P GFY+ EG G      ++HLEGGG CVDEEDC GR+KT +GSS +W      +      G  S+    N  F +   + + YCDG  Y+G V++ VD     ++FRG  IL  + + L++ G+ EA  +I+ G SAGG+ TY+H D +R  L P  V    M  AG F+++    G+P      Q +  + N+   +D+DC   Y+  + +KC    Y  P+I T +F  NS  D WQ  N LQLDC       +CT +++E ++ F
Sbjct:   24 NLILLDDPGEAVCLDGSPPGFYYREGSGSDATKIIIHLEGGGVCVDEEDCLGRSKTDLGSSKNW------KQMADFGGFLSDIKLFNEKFYDWNIVFVKYCDGGLYSGYVSQPVDVNGTSIYFRGNTILKAIMQYLRDNGIKEASDVILTGCSAGGIATYIHADYVRSVL-PSSVNYRAMSDAGYFIEVLNVNGEPIAKERGQKVYKLHNMSISLDEDCAKDYTGNDTYKCTAPQYLYPYIKTPIFSFNSQYDTWQIENNLQLDC----DPPHCTPEQMEKLQEF 297          
BLAST of mRNA_M-pyrifera_M_contig73350.17398.1 vs. uniprot
Match: A0A8J9YLH6_BRALA (NOTUM protein n=2 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9YLH6_BRALA)

HSP 1 Score: 192 bits (488), Expect = 1.440e-54
Identity = 112/258 (43.41%), Postives = 144/258 (55.81%), Query Frame = 1
Query:   22 SSGALCLDGTPGGFYFYEGRGEQGKIWVLHLEGGGWCVDEEDCKGRAKTPIGSSSSWPMSGCPEMDGSDAGMFSNSSAINPDFANATKIHLNYCDGASYAGNVTEVVDGE---LHFRGALILTELFRALQELGLGEAEALIVKGTSAGGLGTYLHIDRIRQTLVPPGVKVVGMPGAGMFLDLPAWTGKPSYTPHYQYIANMQNVWGFVDDDCIAHYSTEERWKCFMAPYTLPFITTDLFISNSLTDAWQAANILQLDC 786
            S GA+CLDG+P G+Y   G G+  K W+++LEGGGWC D  DC  R+ T  GSS  +  S      G D G  SNS ++NP+F N     L YCDGAS+AGN T+VV  E   L+FRG  +L  L   L   GL +A  +I+ G SAGGL   LH D ++ T +P  V    +P AG F D+   TG       YQ   NMQ+  G VD DCI   S E +W+C+MA Y   ++ T +FI+NS  D W    I  L C
Sbjct:   98 SQGAVCLDGSPPGYYLRRGTGKGTKNWIIYLEGGGWCWDIPDCYRRSHTEYGSSKYFKWS-----FGFD-GFLSNSPSVNPNFYNWNMAMLKYCDGASFAGNRTDVVVHEGKQLYFRGRRVLRALLDHLMAHGLDQARRVILSGVSAGGLAVMLHADYVK-TRLPAHVIYHALPDAGFFPDMRNITGHEHIRILYQRSFNMQHCAGGVDKDCIKDKSEETQWQCYMAQYAYKYVQTPMFITNSGYDYWSLWFIYHLRC 348          
BLAST of mRNA_M-pyrifera_M_contig73350.17398.1 vs. uniprot
Match: UPI0018D8C742 (pectin acetylesterase 8-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D8C742)

HSP 1 Score: 192 bits (488), Expect = 1.510e-54
Identity = 108/257 (42.02%), Postives = 153/257 (59.53%), Query Frame = 1
Query:   28 GALCLDGTPGGFYFYEGRGEQGKIWVLHLEGGGWCVDEEDCKGRAKTPIGSSSSWPMSGCPEMDGSDAGMFSNSSAINPDFANATKIHLNYCDGASYAGNVTEVV---DGELHFRGALILT-ELFRALQELGLGEAEALIVKGTSAGGLGTYLHIDRIRQTLVPPGVKVVGMPGAGMFLDLPAWTGKPSYTPHYQYIANMQNVWGFVDDDCIAHYSTEERWKCFMAPYTLPFITTDLFISNSLTDAWQAANILQLDC 786
            GA CLDG+P  +Y  +G   Q + W++ L+GGGWC +  DC  R+ + +GSS   P       + S  G+ S ++++NP+F +   I +NYCDGAS++GN+ + V      ++FRG  +L   +   L++ GL EAE +I+ G SAGGL   LHID IR  LVPP + + G+  AG FLD    +G   Y  H + I NMQN  G ++  C+A  S +++WKCF A YT P+I+T LFI NS  D WQ   IL L C
Sbjct:  101 GAYCLDGSPPSYYIRKGASTQ-RSWIVVLQGGGWCWNVSDCYNRSLSGLGSSYRLPK------EASFDGIMSANASVNPEFYDWNMIMINYCDGASFSGNLEKPVMYNSTNMYFRGYRVLNLVMVYLLKKTGLKEAERIILGGLSAGGLAASLHIDFIRS-LVPPDIPLHGIIDAGFFLDERNISGYEHYAFHMKKIYNMQNASGSLNKACLAAMSPQDKWKCFFAEYTYPYISTPLFIINSAYDYWQQWFILDLRC 349          
BLAST of mRNA_M-pyrifera_M_contig73350.17398.1 vs. uniprot
Match: A0A1Y1ITH8_KLENI (Pectin acetylesterase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1ITH8_KLENI)

HSP 1 Score: 191 bits (484), Expect = 2.170e-54
Identity = 103/253 (40.71%), Postives = 133/253 (52.57%), Query Frame = 1
Query:   25 SGALCLDGTPGGFYFYEGRGEQGKIWVLHLEGGGWCVDEEDCKGRAKTPIGSSSSWPMSGCPEMDGSDAGMFSNSSAINPDFANATKIHLNYCDGASYAGNVTEVVDG---ELHFRGALILTELFRALQELGLGEAEALIVKGTSAGGLGTYLHIDRIRQTLVPPGVKVVGMPGAGMFLDLPAWTGKPSYTPHYQYIANMQNVWGFVDDDCIAHYSTEERWKCFMAPYTLPFITTDLFISNSLTDAWQAANIL 774
            SGA+CLDG+P  +YF  G G     W++H EGGGWC   EDC  RA   +GSS  WP +          G  S   A+NPD       +L YCDGAS+AGNV++        + FRGA IL  +   L   GL  A+ ++V G SAGGL  YLH D +    V  G     MP AG F+D P   G+      ++    M NV G V++ C+A     + WKCF APY+  F+   LFI N L D WQ AN++
Sbjct:   62 SGAVCLDGSPAAYYFQPGTGAGAHNWIIHFEGGGWCTSLEDCVLRAGDSLGSSHGWPRTR------HLTGHLSRDPAVNPDLHTWNAAYLPYCDGASFAGNVSQPQSSGGQSVFFRGAAILDAVLADLMHRGLHTAQRVLVTGCSAGGLAAYLHCDYVAAR-VGGGAVTKCMPDAGFFMDAPDVWGQRRMEGLFRAAVEMHNVLGNVNEACVAALPARDAWKCFYAPYSASFVQAPLFIVNPLFDTWQIANLV 307          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig73350.17398.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1X7UD88_AMPQE3.120e-6942.60Uncharacterized protein n=1 Tax=Amphimedon queensl... [more]
A0A6B2L7E7_9EUKA2.720e-6845.17Uncharacterized protein n=1 Tax=Arcella intermedia... [more]
A0A1X7UEM4_AMPQE8.520e-6742.31Uncharacterized protein n=1 Tax=Amphimedon queensl... [more]
A0A1X7UMA3_AMPQE2.870e-6643.12Uncharacterized protein n=1 Tax=Amphimedon queensl... [more]
A0A1X7UMP5_AMPQE2.180e-6340.35Uncharacterized protein n=2 Tax=Amphimedon queensl... [more]
A0A6P4Z3S5_BRABE5.980e-5743.13pectin acetylesterase 11-like n=1 Tax=Branchiostom... [more]
UPI00021A526D2.110e-5637.19pectin acetylesterase 5-like n=1 Tax=Amphimedon qu... [more]
A0A8J9YLH6_BRALA1.440e-5443.41NOTUM protein n=2 Tax=Branchiostoma lanceolatum Ta... [more]
UPI0018D8C7421.510e-5442.02pectin acetylesterase 8-like n=1 Tax=Patiria minia... [more]
A0A1Y1ITH8_KLENI2.170e-5440.71Pectin acetylesterase n=1 Tax=Klebsormidium nitens... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig73350contigM-pyrifera_M_contig73350:21..869 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score229.6
Seed ortholog evalue1.9e-57
Seed eggNOG ortholog400682.PAC_15715259
KEGG rclassRC00020,RC00041
KEGG koko:K19882
KEGG ReactionR11202
KEGG Pathwayko04310,map04310
Hectar predicted targeting categoryother localisation
EggNOG free text desc.protein depalmitoleylation
EggNOG OGs38W7Q@33154,3B9FY@33208,KOG4287@1,KOG4287@2759
EC3.1.1.98
COG Functional cat.M
Best tax levelMetazoa
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons1
Model size849
Cds size849
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816630.7987874-CDS-M-pyrifera_M_contig73350:20..8691622816630.7987874-CDS-M-pyrifera_M_contig73350:20..869Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig73350 21..869 -
1692278087.7036343-CDS-M-pyrifera_M_contig73350:20..8691692278087.7036343-CDS-M-pyrifera_M_contig73350:20..869Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig73350 21..869 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig73350.17398.1prot_M-pyrifera_M_contig73350.17398.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig73350 21..869 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig73350.17398.1

>prot_M-pyrifera_M_contig73350.17398.1 ID=prot_M-pyrifera_M_contig73350.17398.1|Name=mRNA_M-pyrifera_M_contig73350.17398.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=283bp
KLHLFDASSGALCLDGTPGGFYFYEGRGEQGKIWVLHLEGGGWCVDEEDC
KGRAKTPIGSSSSWPMSGCPEMDGSDAGMFSNSSAINPDFANATKIHLNY
CDGASYAGNVTEVVDGELHFRGALILTELFRALQELGLGEAEALIVKGTS
AGGLGTYLHIDRIRQTLVPPGVKVVGMPGAGMFLDLPAWTGKPSYTPHYQ
YIANMQNVWGFVDDDCIAHYSTEERWKCFMAPYTLPFITTDLFISNSLTD
AWQAANILQLDCIHNGQLQNCTAQELEAIKNFS
back to top

mRNA from alignment at M-pyrifera_M_contig73350:21..869-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig73350.17398.1 ID=mRNA_M-pyrifera_M_contig73350.17398.1|Name=mRNA_M-pyrifera_M_contig73350.17398.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=849bp|location=Sequence derived from alignment at M-pyrifera_M_contig73350:21..869- (Macrocystis pyrifera P11B4 male)
AAGCTGCATTTATTTGATGCATCAAGTGGGGCATTATGTTTAGATGGAAC TCCTGGTGGATTTTACTTCTATGAGGGACGTGGGGAGCAAGGAAAGATTT GGGTGTTGCATCTTGAAGGTGGAGGGTGGTGTGTGGATGAGGAAGATTGC AAAGGACGAGCAAAGACACCGATTGGAAGTTCATCGAGTTGGCCAATGTC TGGATGTCCCGAGATGGATGGTAGCGATGCTGGAATGTTTTCAAACTCGT CGGCAATCAACCCAGACTTTGCAAATGCCACCAAGATCCACCTCAACTAC TGTGATGGAGCTAGTTATGCTGGAAATGTCACCGAAGTGGTAGATGGAGA ATTGCACTTCCGAGGTGCACTAATCCTCACAGAACTCTTTCGAGCATTGC AGGAACTTGGGTTGGGAGAAGCAGAGGCTTTGATAGTGAAAGGAACCAGT GCTGGAGGGTTGGGGACGTATTTGCACATTGACCGCATTCGACAAACTCT AGTACCTCCAGGAGTGAAAGTCGTTGGAATGCCTGGAGCAGGAATGTTCC TTGATCTTCCAGCTTGGACGGGAAAGCCTTCATACACACCTCACTATCAA TACATTGCCAACATGCAAAATGTTTGGGGCTTTGTTGACGATGATTGCAT TGCACATTACTCTACAGAGGAAAGGTGGAAGTGCTTTATGGCACCCTATA CCCTCCCTTTCATCACAACTGACCTCTTCATCTCCAATTCTCTCACTGAC GCTTGGCAAGCAGCAAATATCCTGCAACTCGATTGTATCCACAATGGACA GCTCCAAAATTGCACAGCACAAGAGCTCGAAGCGATCAAAAACTTTTCC
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig73350:21..869-

>mRNA_M-pyrifera_M_contig73350.17398.1 ID=mRNA_M-pyrifera_M_contig73350.17398.1|Name=mRNA_M-pyrifera_M_contig73350.17398.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1698bp|location=Sequence derived from alignment at M-pyrifera_M_contig73350:21..869- (Macrocystis pyrifera P11B4 male)
AAGCTGCATTTATTTGATGCATCAAGTGGGGCATTATGTTTAGATGGAAC
TCCTGGTGGATTTTACTTCTATGAGGGACGTGGGGAGCAAGGAAAGATTT
GGGTGTTGCATCTTGAAGGTGGAGGGTGGTGTGTGGATGAGGAAGATTGC
AAAGGACGAGCAAAGACACCGATTGGAAGTTCATCGAGTTGGCCAATGTC
TGGATGTCCCGAGATGGATGGTAGCGATGCTGGAATGTTTTCAAACTCGT
CGGCAATCAACCCAGACTTTGCAAATGCCACCAAGATCCACCTCAACTAC
TGTGATGGAGCTAGTTATGCTGGAAATGTCACCGAAGTGGTAGATGGAGA
ATTGCACTTCCGAGGTGCACTAATCCTCACAGAACTCTTTCGAGCATTGC
AGGAACTTGGGTTGGGAGAAGCAGAGGCTTTGATAGTGAAAGGAACCAGT
GCTGGAGGGTTGGGGACGTATTTGCACATTGACCGCATTCGACAAACTCT
AGTACCTCCAGGAGTGAAAGTCGTTGGAATGCCTGGAGCAGGAATGTTCC
TTGATCTTCCAGCTTGGACGGGAAAGCCTTCATACACACCTCACTATCAA
TACATTGCCAACATGCAAAATGTTTGGGGCTTTGTTGACGATGATTGCAT
TGCACATTACTCTACAGAGGAAAGGTGGAAGTGCTTTATGGCACCCTATA
CCCTCCCTTTCATCACAACTGACCTCTTCATCTCCAATTCTCTCACTGAC
GCTTGGCAAGCAGCAAATATCCTGCAACTCGATTGTATCCACAATGGACA
GCTCCAAAATTGCACAGCACAAGAGCTCGAAGCGATCAAAAACTTTTCCA
AGCTGCATTTATTTGATGCATCAAGTGGGGCATTATGTTTAGATGGAACT
CCTGGTGGATTTTACTTCTATGAGGGACGTGGGGAGCAAGGAAAGATTTG
GGTGTTGCATCTTGAAGGTGGAGGGTGGTGTGTGGATGAGGAAGATTGCA
AAGGACGAGCAAAGACACCGATTGGAAGTTCATCGAGTTGGCCAATGTCT
GGATGTCCCGAGATGGATGGTAGCGATGCTGGAATGTTTTCAAACTCGTC
GGCAATCAACCCAGACTTTGCAAATGCCACCAAGATCCACCTCAACTACT
GTGATGGAGCTAGTTATGCTGGAAATGTCACCGAAGTGGTAGATGGAGAA
TTGCACTTCCGAGGTGCACTAATCCTCACAGAACTCTTTCGAGCATTGCA
GGAACTTGGGTTGGGAGAAGCAGAGGCTTTGATAGTGAAAGGAACCAGTG
CTGGAGGGTTGGGGACGTATTTGCACATTGACCGCATTCGACAAACTCTA
GTACCTCCAGGAGTGAAAGTCGTTGGAATGCCTGGAGCAGGAATGTTCCT
TGATCTTCCAGCTTGGACGGGAAAGCCTTCATACACACCTCACTATCAAT
ACATTGCCAACATGCAAAATGTTTGGGGCTTTGTTGACGATGATTGCATT
GCACATTACTCTACAGAGGAAAGGTGGAAGTGCTTTATGGCACCCTATAC
CCTCCCTTTCATCACAACTGACCTCTTCATCTCCAATTCTCTCACTGACG
CTTGGCAAGCAGCAAATATCCTGCAACTCGATTGTATCCACAATGGACAG
CTCCAAAATTGCACAGCACAAGAGCTCGAAGCGATCAAAAACTTTTCC
back to top