mRNA_M-pyrifera_M_contig73343.17396.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig73343.17396.1 vs. uniprot
Match: A0A348AL84_9FIRM (Corrinoid ABC transporter substrate-binding protein n=1 Tax=Methylomusa anaerophila TaxID=1930071 RepID=A0A348AL84_9FIRM) HSP 1 Score: 59.3 bits (142), Expect = 1.310e-7 Identity = 33/99 (33.33%), Postives = 53/99 (53.54%), Query Frame = 1 Query: 127 ERIIGLPSAFDEYINVTLPAELLDPDRRFPEFNAELLLALDPDLIIAGSWIPAESVEHLTSAGVDVYVMPTVTDLDHIRAAIRDVGARLGVEARAAELL 423 ER++ L D+ T+ AE R E+NAE +L+L PDL+IA W E ++ L G+ V+V + + ++ AIR++ +G EA + LL Sbjct: 96 ERVVALHYLADDPGISTIAAEAGRVPVRLQEYNAEQILSLQPDLVIAPDWSRIELIQTLRDMGIPVFVSKGPSSVAEVKQAIREISQAIGEEAAGSRLL 194
BLAST of mRNA_M-pyrifera_M_contig73343.17396.1 vs. uniprot
Match: UPI00128B47D1 (ABC transporter substrate-binding protein n=1 Tax=Oceanobacillus sp. CFH 90083 TaxID=2592336 RepID=UPI00128B47D1) HSP 1 Score: 54.7 bits (130), Expect = 5.400e-6 Identity = 39/127 (30.71%), Postives = 67/127 (52.76%), Query Frame = 1 Query: 55 ERVVLATAPAVDLAFDLLGSEAATERIIGLPSAFDEYINVTLPAELLDPDR-RFPEFNAELLLALDPDLIIAGSWIPA---ESVEHLTSAGVDVYVMPTVTDLDHIRAAIRDVGARLGVEARAAELL 423 ER+V ++AF L ++++G+ N T P E+LD D EFN E++++LDPD+++A + A E++E L A +DV+ + TD+D I ++G +G E A +L+ Sbjct: 71 ERIVSLMPSNTEIAFAL----GQGDKVVGVSE------NDTYPDEVLDIDTVGGMEFNVEVIISLDPDVVLAHASQVASSQEALEQLEDADIDVFTVADATDVDTTYETIENIGQVVGAEEEAEQLV 187
BLAST of mRNA_M-pyrifera_M_contig73343.17396.1 vs. uniprot
Match: A0A7Y4XK35_HYPSQ (ABC transporter substrate-binding protein n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A7Y4XK35_HYPSQ) HSP 1 Score: 53.5 bits (127), Expect = 1.290e-5 Identity = 27/67 (40.30%), Postives = 41/67 (61.19%), Query Frame = 1 Query: 223 NAELLLALDPDLIIAGSWIPAESVEHLTSAGVDVYVMPTVTDLDHIRAAIRDVGARLGVEARAAELL 423 AE +LAL PDL+IAG + +V+ L G +V ++P TD D +R +R + A +G ARA ++L Sbjct: 86 TAEEVLALKPDLVIAGEYTTGATVDLLRRLGQNVLIVPMATDFDGMRKTVRQIAAAVGEMARAEKVL 152
BLAST of mRNA_M-pyrifera_M_contig73343.17396.1 vs. uniprot
Match: A0A6N7AA95_9CHLR (Iron complex transport system substrate-binding protein n=1 Tax=Anaerolineaceae bacterium TaxID=2024896 RepID=A0A6N7AA95_9CHLR) HSP 1 Score: 53.1 bits (126), Expect = 1.800e-5 Identity = 44/130 (33.85%), Postives = 67/130 (51.54%), Query Frame = 1 Query: 43 PATAERVVLATAPAVDLAFDLLGSEAATERIIGLPSAFDEYINVTLPAE---LLDPDRRFPEFNAELLLALDPDLIIAGSWIPAESVEHLTSAGVDVYVMPTVTDLDHIRAAIRDVGARLGVEARAAELL 423 PA A+RVV + AP+ ++L + A +++G F +Y PAE + D E+N E ++AL PDL++AG P E V L G+ VY +P L+ + A + VGA G + AA L+ Sbjct: 49 PAPAQRVV-SLAPSNT---EILFAVGAGAQVVGR-DMFSDY-----PAEAASVQDIGGSMGEYNLEAIVALQPDLVLAGGINPPELVASLEGLGLTVYFLPNPATLEEMYANLETVGALTGRGSEAAALV 168
BLAST of mRNA_M-pyrifera_M_contig73343.17396.1 vs. uniprot
Match: A0A3B9PYY0_9CHLR (ABC transporter substrate-binding protein n=1 Tax=Anaerolineaceae bacterium TaxID=2024896 RepID=A0A3B9PYY0_9CHLR) HSP 1 Score: 51.6 bits (122), Expect = 6.320e-5 Identity = 35/111 (31.53%), Postives = 59/111 (53.15%), Query Frame = 1 Query: 100 DLLGSEAATERIIGLPSAFDEYINVTLPAE---LLDPDRRFPEFNAELLLALDPDLIIAGSWIPAESVEHLTSAGVDVYVMPTVTDLDHIRAAIRDVGARLGVEARAAELL 423 +LL A ++++G S F +Y PA+ L D + E+N E+LL+L+PDL++A AE V+ + G+ V+ + LD + I+DVG G E A +++ Sbjct: 73 ELLYVVGAGDQVVGRDS-FSDY-----PADASALPDIGGGYSEYNLEMLLSLEPDLVLAAEINTAELVQSIEDLGIQVFYIKNPLTLDDLYTTIQDVGLLSGHEDAAQQVI 177
BLAST of mRNA_M-pyrifera_M_contig73343.17396.1 vs. uniprot
Match: A0A511ZPY8_9BACI (Putative ABC transporter substrate-binding lipoprotein YvrC n=3 Tax=Oceanobacillus TaxID=182709 RepID=A0A511ZPY8_9BACI) HSP 1 Score: 51.6 bits (122), Expect = 6.430e-5 Identity = 29/89 (32.58%), Postives = 52/89 (58.43%), Query Frame = 1 Query: 169 NVTLPAELLDPDR-RFPEFNAELLLALDPDLIIAGSWIPA---ESVEHLTSAGVDVYVMPTVTDLDHIRAAIRDVGARLGVEARAAELL 423 N T P E+ D D+ EFN E++++LDPD+++A + A E+++ L A ++V+ + TD+D I ++G +G E A +L+ Sbjct: 99 NDTYPEEVFDIDKVGGMEFNVEVIISLDPDVVLAHESLVASSQEALDQLEGADIEVFTVADATDVDTTYETIDNIGQVVGAEEEAEQLV 187
BLAST of mRNA_M-pyrifera_M_contig73343.17396.1 vs. uniprot
Match: A0A7X0B171_9PROT (Iron complex transport system substrate-binding protein n=2 Tax=Nitrospirillum iridis TaxID=765888 RepID=A0A7X0B171_9PROT) HSP 1 Score: 51.2 bits (121), Expect = 8.280e-5 Identity = 44/144 (30.56%), Postives = 65/144 (45.14%), Query Frame = 1 Query: 46 ATAERVVLATAPAVDLAFDLLGSEAATERIIGLPSAFDEYINVTLPAELL--------DPDRRF----------PEFNAELLLALDPDLIIAGSWIPAESVEHLTSAGVDVYVMPTVTDLDHIRAAIRDVGARLGVEARAAELL 423 A A +VLA APA A L + R++ L D+ + LP + DP+ + E AE LLAL PDL++AG++ +V + + V + + D D IRA +R V A LG A+ +LL Sbjct: 10 AAAMTLVLAMAPAAAAA-SLARAGEPPRRVVSLNLCTDQLAALLLPPGRIAALSRLARDPELSYVATRIEGIAVTEGGAEELLALKPDLVLAGTYTAQPAVRMAKAHHIPVVQVGLIADFDGIRAQVRTVAAALGESAKGEDLL 152 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig73343.17396.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig73343.17396.1 >prot_M-pyrifera_M_contig73343.17396.1 ID=prot_M-pyrifera_M_contig73343.17396.1|Name=mRNA_M-pyrifera_M_contig73343.17396.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=141bp PLLAACADTTPADAPATAERVVLATAPAVDLAFDLLGSEAATERIIGLPSback to top mRNA from alignment at M-pyrifera_M_contig73343:2..424- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig73343.17396.1 ID=mRNA_M-pyrifera_M_contig73343.17396.1|Name=mRNA_M-pyrifera_M_contig73343.17396.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=423bp|location=Sequence derived from alignment at M-pyrifera_M_contig73343:2..424- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig73343:2..424- >mRNA_M-pyrifera_M_contig73343.17396.1 ID=mRNA_M-pyrifera_M_contig73343.17396.1|Name=mRNA_M-pyrifera_M_contig73343.17396.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=846bp|location=Sequence derived from alignment at M-pyrifera_M_contig73343:2..424- (Macrocystis pyrifera P11B4 male)back to top |