mRNA_M-pyrifera_M_contig73340.17391.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig73340.17391.1
Unique NamemRNA_M-pyrifera_M_contig73340.17391.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig73340.17391.1 vs. uniprot
Match: A0A836T5S3_9GAMM (DNA polymerase III subunit gamma/tau (Fragment) n=1 Tax=Chromatiaceae bacterium TaxID=2049432 RepID=A0A836T5S3_9GAMM)

HSP 1 Score: 266 bits (681), Expect = 1.190e-83
Identity = 140/254 (55.12%), Postives = 179/254 (70.47%), Query Frame = 1
Query:    1 LLNNVQYAPVHGNYKVYIIDEVHMLSGHSFNALLKTLEEPPPHVIFILATTDPQRLPITVLSRCLQFHLKQLSPECIKNYLAKIMDLEQISADDLALTLIAEAADGSMRDALSLLDQALMGSETQLADTTVREMLGSVAPVKLQTLLQHIQQNAAQAAIDWTTDSANNGIDFFTLTDDLLQFLHTAAIAQTVPDSIPKTQANYSAIYAIANSLSPEELQLYYEIVLLNKKNLPYAASPRQGFEMMVLRLLAFCP 762
            LL+NVQYAP  G YKVY+IDEVHM SGHSFNALLKTLEEPPPHV F+LATTDPQ+LP+T+LSRCLQF+LK LSPE I+N+L  ++  E I  D  AL LIA AADGSMRDALSLLDQA+      L ++ VR MLGS+    +  LL  +    A A +      A    DF  +  +L+  LH  A+AQ VP+++    A+  A+ A+A  LSPE++QLYY+I L+ +++LP A +PR GFEM++LR+LAF P
Sbjct:  107 LLDNVQYAPTRGRYKVYLIDEVHMFSGHSFNALLKTLEEPPPHVKFLLATTDPQKLPVTILSRCLQFNLKHLSPEQIRNHLGMVLGKEGIEFDTPALGLIARAADGSMRDALSLLDQAIAFGGGTLRESDVRSMLGSIEQHHVIDLLNGLADGDAGALLTRVAQLAEQAPDFAGVLAELISTLHRIALAQAVPEAVNDEMADREAVLALAERLSPEDVQLYYQIALIGRRDLPLATTPRGGFEMVLLRMLAFRP 360          
BLAST of mRNA_M-pyrifera_M_contig73340.17391.1 vs. uniprot
Match: A0A2E3MFE0_9GAMM (DNA polymerase III subunit gamma/tau n=1 Tax=Legionellales bacterium TaxID=2026754 RepID=A0A2E3MFE0_9GAMM)

HSP 1 Score: 266 bits (681), Expect = 1.730e-82
Identity = 143/272 (52.57%), Postives = 190/272 (69.85%), Query Frame = 1
Query:    1 LLNNVQYAPVHGNYKVYIIDEVHMLSGHSFNALLKTLEEPPPHVIFILATTDPQRLPITVLSRCLQFHLKQLSPECIKNYLAKIMDLEQISADDLALTLIAEAADGSMRDALSLLDQALMGSETQLADTTVREMLGSVAPVKLQTLLQHIQQNAAQAAIDWTTDSANNGIDFFTLTDDLLQFLHTAAIAQTVPDSIPKTQANYSAIYAIANSLSPEELQLYYEIVLLNKKNLPYAASPRQGFEMMVLRLLAFCPQ-------KKTASAKASP 795
            LL+NVQYAP  G YKVY+IDEVHMLSGHSFNALLKTLEEPPPHV+F+LATTDPQ+LPITVLSRCLQFHLK + PE I ++LA +++ E I  D  ALT++ +AADGSMRD LSLLDQA+  S  +L    VREMLG++    +  ++  + Q  A   +   ++  + G DF  + DDLL  L   AI+Q VPD+   T  + + +  +A ++S ++LQL+Y+I LL KK+LP A + +QGFEM++LR+LAF P+       +K  S KA P
Sbjct:  107 LLDNVQYAPTRGRYKVYLIDEVHMLSGHSFNALLKTLEEPPPHVVFLLATTDPQKLPITVLSRCLQFHLKNMPPEQIASHLADVLNKETIEFDASALTMLGKAADGSMRDGLSLLDQAIAFSNGKLTQALVREMLGAIEQNHIYDIVTCLSQQDAPGTLAKASELNSQGADFQQVLDDLLSLLQEIAISQHVPDN--PTDFDPAEVRELAQTISAQDLQLFYQIALLGKKDLPLAPTAKQGFEMILLRMLAFQPKANEPQQVRKPVSTKAQP 376          
BLAST of mRNA_M-pyrifera_M_contig73340.17391.1 vs. uniprot
Match: A0A7U8GS56_NEPCE (DNA polymerase III subunit gamma/tau n=1 Tax=Neptuniibacter caesariensis TaxID=207954 RepID=A0A7U8GS56_NEPCE)

HSP 1 Score: 266 bits (680), Expect = 1.660e-81
Identity = 140/262 (53.44%), Postives = 184/262 (70.23%), Query Frame = 1
Query:    1 LLNNVQYAPVHGNYKVYIIDEVHMLSGHSFNALLKTLEEPPPHVIFILATTDPQRLPITVLSRCLQFHLKQLSPECIKNYLAKIMDLEQISADDLALTLIAEAADGSMRDALSLLDQALMGSETQLADTTVREMLGSVAPVKLQTLLQHIQQNAAQAAIDWTTDSANNGIDFFTLTDDLLQFLHTAAIAQTVPDSIPKTQANYSAIYAIANSLSPEELQLYYEIVLLNKKNLPYAASPRQGFEMMVLRLLAFCPQKKTASAK 786
            L+ NVQYAP HG YKVY+IDEVHMLS HSFNALLKTLEEPPPHV F+LATTDPQ+LPIT+LSRCLQF+LK L PE I N+L  ++  EQIS ++ AL L+A +ADGSMRDA+SL DQA+     Q+A+T VR MLG++    +  +L  +    A A +   TD A    D+ T+  DL+  LH  A+AQ +PD++  +  +   I  +A  LS E++QLYY+I L+ +K+LP+   PR+G EM++LR+LAF P    ASAK
Sbjct:  107 LMENVQYAPTHGRYKVYLIDEVHMLSTHSFNALLKTLEEPPPHVKFLLATTDPQKLPITILSRCLQFNLKNLIPERIVNHLTHVLTQEQISFEEPALWLLARSADGSMRDAMSLTDQAIAFGAGQIAETDVRAMLGTIDQRLVYQMLYSLAAGDANALMQAVTDLAQFSPDYNTVLGDLVSVLHRIAVAQVLPDAVDNSMGDQIQITELAGQLSAEDVQLYYQIALMGRKDLPFVPDPREGLEMVLLRMLAFRP----ASAK 364          
BLAST of mRNA_M-pyrifera_M_contig73340.17391.1 vs. uniprot
Match: A0A0S2TDD6_9GAMM (DNA polymerase III subunit gamma/tau n=1 Tax=Candidatus Tenderia electrophaga TaxID=1748243 RepID=A0A0S2TDD6_9GAMM)

HSP 1 Score: 261 bits (667), Expect = 1.390e-80
Identity = 139/263 (52.85%), Postives = 184/263 (69.96%), Query Frame = 1
Query:    1 LLNNVQYAPVHGNYKVYIIDEVHMLSGHSFNALLKTLEEPPPHVIFILATTDPQRLPITVLSRCLQFHLKQLSPECIKNYLAKIMDLEQISADDLALTLIAEAADGSMRDALSLLDQALMGSETQLADTTVREMLGSVAPVKLQTLLQHIQQNAAQAAIDWTTDSANNGIDFFTLTDDLLQFLHTAAIAQTVPDSIPKTQANYSAIYAIANSLSPEELQLYYEIVLLNKKNLPYAASPRQGFEMMVLRLLAFCPQKKTASAKA 789
            LL NVQYAP  G YKVY+IDEVHMLS HSFNALLKTLEEPPPHV F+LATTDPQ+LP+T+LSRCLQF+LK+++PE I  +LA ++  E +  D  ALTLIA  ADGSMRDALSLLDQA+     +L +  VR MLG++    +  LLQ +  N A A ++   D A  G DF  +  +L+  LHT A+AQ  P ++ +  A+  A+ A+A+ +S E++QLYY+I L+ +++LP A   R G EM++LR+LAF P   TA  +A
Sbjct:  107 LLENVQYAPTRGRYKVYLIDEVHMLSAHSFNALLKTLEEPPPHVKFLLATTDPQKLPVTILSRCLQFNLKRMAPEMIGGHLAHVLAQEGVEFDPAALTLIAAGADGSMRDALSLLDQAIAYGGGKLVEDEVRAMLGTIDRGHVLRLLQGLADNDATAILETVNDLAQQGTDFSAVLAELISQLHTLALAQLAPATL-EGLADQQALAALADKISAEDIQLYYQIGLIGRRDLPLAPELRSGLEMVLLRMLAFRPDSSTAQPEA 368          
BLAST of mRNA_M-pyrifera_M_contig73340.17391.1 vs. uniprot
Match: A0A7C1CZL7_9GAMM (DNA polymerase III subunit gamma/tau n=1 Tax=Thioalkalivibrio sp. TaxID=2093813 RepID=A0A7C1CZL7_9GAMM)

HSP 1 Score: 259 bits (661), Expect = 4.300e-79
Identity = 136/261 (52.11%), Postives = 181/261 (69.35%), Query Frame = 1
Query:    1 LLNNVQYAPVHGNYKVYIIDEVHMLSGHSFNALLKTLEEPPPHVIFILATTDPQRLPITVLSRCLQFHLKQLSPECIKNYLAKIMDLEQISADDLALTLIAEAADGSMRDALSLLDQALMGSETQLADTTVREMLGSVAPVKLQTLLQHIQQNAAQAAIDWTTDSANNGIDFFTLTDDLLQFLHTAAIAQTVPDSIPKTQANYSAIYAIANSLSPEELQLYYEIVLLNKKNLPYAASPRQGFEMMVLRLLAFCPQKKTASA 783
            LL+NVQYAP  G +KVY+IDEVHMLSGHSFNALLKTLEEPPPHV F+LATTDPQ+LP+T+LSRCLQF LK++    I  +L  I++ E I AD  AL  IA AADGSMRDALSLLDQA+      + D  VR+MLG ++   +  LL  +     +  ID     A    DF  + DDL+  LH  A+AQ VP+++   +++ + I A+A  LSPE++QLYY+I LL +++LP   +P+ GFEM++LR+ AF P + +A+A
Sbjct:  107 LLDNVQYAPTRGRFKVYLIDEVHMLSGHSFNALLKTLEEPPPHVKFLLATTDPQKLPVTILSRCLQFSLKRMPATMISGHLTHILEQEGIRADAAALDQIAVAADGSMRDALSLLDQAIAFGGGAVTDAEVRDMLGGISREHVFGLLDAVAAGEGRGLIDAVARVAEQAPDFEGVLDDLIALLHQVALAQIVPEAVDSVESDAARICALAERLSPEDVQLYYQIALLGRRDLPLNPNPQAGFEMVLLRMQAFRPVEASAAA 367          
BLAST of mRNA_M-pyrifera_M_contig73340.17391.1 vs. uniprot
Match: A0A136HL23_9GAMM (DNA polymerase III subunit gamma/tau n=2 Tax=Neptuniibacter TaxID=459520 RepID=A0A136HL23_9GAMM)

HSP 1 Score: 260 bits (665), Expect = 5.620e-79
Identity = 132/254 (51.97%), Postives = 181/254 (71.26%), Query Frame = 1
Query:    1 LLNNVQYAPVHGNYKVYIIDEVHMLSGHSFNALLKTLEEPPPHVIFILATTDPQRLPITVLSRCLQFHLKQLSPECIKNYLAKIMDLEQISADDLALTLIAEAADGSMRDALSLLDQALMGSETQLADTTVREMLGSVAPVKLQTLLQHIQQNAAQAAIDWTTDSANNGIDFFTLTDDLLQFLHTAAIAQTVPDSIPKTQANYSAIYAIANSLSPEELQLYYEIVLLNKKNLPYAASPRQGFEMMVLRLLAFCP 762
            L+ NVQYAP HG YKVY+IDEVHMLS HSFNALLKTLEEPPPHV F+LATTDPQ+LPIT+LSRCLQF+LK L PE I ++L+ ++  E IS ++ AL L+A +ADGSMRDA+SL DQA+      + +  VR MLG++    +  +L  +    A+A +   TD A    D+ T+  DLL  LH  A+AQT+PD++  +  +   + A+A +LS E++QLYY++ L+ +K+LP+   PR+G EM++LR+LAF P
Sbjct:  107 LMENVQYAPTHGRYKVYLIDEVHMLSTHSFNALLKTLEEPPPHVKFLLATTDPQKLPITILSRCLQFNLKNLIPERIVSHLSHVLGEENISFEEPALWLLARSADGSMRDAMSLTDQAIAFGAGAINEADVRAMLGTIDQRLVYQMLDCLAAGDAKALMAAVTDLAQFSPDYNTVLGDLLSVLHRIALAQTIPDAVDNSMGDMIQVQALAGTLSAEDIQLYYQVALMGRKDLPFVPDPREGLEMVLLRMLAFRP 360          
BLAST of mRNA_M-pyrifera_M_contig73340.17391.1 vs. uniprot
Match: B8GPJ3_THISH (DNA polymerase III subunit gamma/tau n=2 Tax=Thioalkalivibrio TaxID=106633 RepID=B8GPJ3_THISH)

HSP 1 Score: 256 bits (655), Expect = 1.360e-78
Identity = 134/264 (50.76%), Postives = 181/264 (68.56%), Query Frame = 1
Query:    1 LLNNVQYAPVHGNYKVYIIDEVHMLSGHSFNALLKTLEEPPPHVIFILATTDPQRLPITVLSRCLQFHLKQLSPECIKNYLAKIMDLEQISADDLALTLIAEAADGSMRDALSLLDQALMGSETQLADTTVREMLGSVAPVKLQTLLQHIQQNAAQAAIDWTTDSANNGIDFFTLTDDLLQFLHTAAIAQTVPDSIPKTQANYSAIYAIANSLSPEELQLYYEIVLLNKKNLPYAASPRQGFEMMVLRLLAFCPQKKTASAKAS 792
            LL+NVQYAP  G YKVY+IDEVHMLS HSFNALLKTLEEPPPHV F+LATTDPQ+LP+T+LSRCLQF LK +  + +  +L K+++ E +  D  A+  +A AA GSMRDALSLLDQA+      L D  VREMLG+++   L+ +LQ +      A +    D A    D+  +  +L+  LH  A+AQ VP+++ +   + +A+ A+A SL+PE++QLYY+I LL +++LP A  PR GFEM +LR+LAF P     +A AS
Sbjct:  107 LLDNVQYAPTRGRYKVYLIDEVHMLSTHSFNALLKTLEEPPPHVKFLLATTDPQKLPVTILSRCLQFSLKAMPADMVGAHLKKVLEQEGVDFDPPAIMRLARAASGSMRDALSLLDQAIAYGSGALRDDDVREMLGAISQDHLERMLQALAAGDGPALMGAVDDLAQRAPDYNAILGELVSLLHQVALAQQVPEALDEGAVDVAAVQAMARSLAPEDVQLYYQIALLARRDLPLAPDPRAGFEMALLRMLAFRPAGAGEAATAS 370          
BLAST of mRNA_M-pyrifera_M_contig73340.17391.1 vs. uniprot
Match: A0A369CDM3_9GAMM (DNA polymerase III subunit gamma/tau n=1 Tax=Thioalbus denitrificans TaxID=547122 RepID=A0A369CDM3_9GAMM)

HSP 1 Score: 257 bits (657), Expect = 1.730e-78
Identity = 137/254 (53.94%), Postives = 181/254 (71.26%), Query Frame = 1
Query:    1 LLNNVQYAPVHGNYKVYIIDEVHMLSGHSFNALLKTLEEPPPHVIFILATTDPQRLPITVLSRCLQFHLKQLSPECIKNYLAKIMDLEQISADDLALTLIAEAADGSMRDALSLLDQALMGSETQLADTTVREMLGSVAPVKLQTLLQHIQQNAAQAAIDWTTDSANNGIDFFTLTDDLLQFLHTAAIAQTVPDSIPKTQANYSAIYAIANSLSPEELQLYYEIVLLNKKNLPYAASPRQGFEMMVLRLLAFCP 762
            LL+NVQYAP  G YKVY+IDEVHMLSGHSFNALLKTLEEPPPHV F+LATTDPQ++P+TVLSRCLQF+LK+LSPE I+++LA I+  E I AD  AL  +A AADGSMRDALSLLDQA+     +L    VR MLG++   ++  LL+ +    A A +D +   A    D+  +  +L+  LH  A+AQ VP+++     +   + A+A  + PEE+QL+Y+I LL +++LP A  PR GFEM++LR+LAF P
Sbjct:  107 LLDNVQYAPSRGRYKVYLIDEVHMLSGHSFNALLKTLEEPPPHVKFLLATTDPQKVPVTVLSRCLQFNLKRLSPERIRDHLAHILAEEGIEADQPALLELALAADGSMRDALSLLDQAIAFGGGRLEADEVRNMLGTLDRGRIFELLELLAAGDAAALLDRSAGLAEQAPDYGAVLGELVSLLHRVALAQLVPEAVDDRLGDRDRVLALAGRIEPEEVQLWYQIGLLGRRDLPLAPDPRGGFEMLLLRMLAFRP 360          
BLAST of mRNA_M-pyrifera_M_contig73340.17391.1 vs. uniprot
Match: A0A661F1N4_9GAMM (DNA polymerase III subunit gamma/tau n=3 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661F1N4_9GAMM)

HSP 1 Score: 256 bits (653), Expect = 1.780e-78
Identity = 136/254 (53.54%), Postives = 179/254 (70.47%), Query Frame = 1
Query:    1 LLNNVQYAPVHGNYKVYIIDEVHMLSGHSFNALLKTLEEPPPHVIFILATTDPQRLPITVLSRCLQFHLKQLSPECIKNYLAKIMDLEQISADDLALTLIAEAADGSMRDALSLLDQALMGSETQLADTTVREMLGSVAPVKLQTLLQHIQQNAAQAAIDWTTDSANNGIDFFTLTDDLLQFLHTAAIAQTVPDSIPKTQANYSAIYAIANSLSPEELQLYYEIVLLNKKNLPYAASPRQGFEMMVLRLLAFCP 762
            LL+NVQYAP  G +KVY+IDEVHMLS HSFNALLKTLEEPPPHV F+LATTDPQ++P+TVLSRCLQF+LKQL+PE I+  + KI+D E++  +  AL  +A AADGSMRD LSLLDQA++  +  + + TV  MLG VA + L  LL  + +N  +  +  T   ++   DF  +   LL  LH  A+AQ VP S+ +   + SA+   A  LS E++QL+Y+I LL +K+LP A  PR GFEM++LR+LAF P
Sbjct:  107 LLDNVQYAPSQGRFKVYLIDEVHMLSAHSFNALLKTLEEPPPHVKFLLATTDPQKIPVTVLSRCLQFNLKQLTPEQIRQQMTKILDDEKLQYEVPALKALAVAADGSMRDGLSLLDQAIVHGDGSVTEETVSAMLGHVAKLPLAELLTSLAENNGKTILAITEQLSSFSADFSYVLQQLLSMLHKLALAQVVPGSLSEDDESVSAL---AEKLSAEDVQLFYQIALLGQKDLPLAPDPRSGFEMVMLRMLAFRP 357          
BLAST of mRNA_M-pyrifera_M_contig73340.17391.1 vs. uniprot
Match: A0A0S8A910_9GAMM (DNA polymerase III subunit gamma/tau n=1 Tax=Gammaproteobacteria bacterium SG8_15 TaxID=1703403 RepID=A0A0S8A910_9GAMM)

HSP 1 Score: 256 bits (655), Expect = 2.710e-78
Identity = 144/286 (50.35%), Postives = 182/286 (63.64%), Query Frame = 1
Query:    1 LLNNVQYAPVHGNYKVYIIDEVHMLSGHSFNALLKTLEEPPPHVIFILATTDPQRLPITVLSRCLQFHLKQLSPECIKNYLAKIMDLEQISADDLALTLIAEAADGSMRDALSLLDQALMGSETQLADTTVREMLGSVAPVKLQTLLQHIQQNAAQAAIDWTTDSANNGIDFFTLTDDLLQFLHTAAIAQTVPDSIPKTQANYSAIYAIANSLSPEELQLYYEIVLLNKKNLPYAASPRQGFEMMVLRLLAFCP---------------QKKTASAKASPTKKKNP 813
            LL NVQYAP  G YKVY+IDEVHMLS HSFNALLKTLEEPPPHV F+LATTDPQ+LP+T+LSRCLQF+LK+L  + I  +L KI+  E +  D  A+ LIA+AADGSMRDALSLLDQA+     +L    VR MLGS+   ++  +LQ +    A + +   T  A +  DF  + ++LL  LH  A+ Q  PD+I      Y  I  IA SLS E+ QLYY+I L+ K++L  A +PR GFEM  LR+LAF P               Q +TA+    PT + NP
Sbjct:  107 LLENVQYAPTRGRYKVYLIDEVHMLSTHSFNALLKTLEEPPPHVKFLLATTDPQKLPVTILSRCLQFNLKRLPADLIAEHLEKILHKENLGFDSDAIRLIADAADGSMRDALSLLDQAIAYGGGELKQPEVRAMLGSIDKSQVFAILQALGNRDANSLLAGITQLATHSADFEQVLNELLSLLHRVALQQIAPDAIDSQHPEYEQISQIAASLSAEDTQLYYQIGLIGKRDLALAPNPRLGFEMTALRMLAFQPGTTKIEQPIPATKPVQNQTAAQATPPTSQPNP 392          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig73340.17391.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836T5S3_9GAMM1.190e-8355.12DNA polymerase III subunit gamma/tau (Fragment) n=... [more]
A0A2E3MFE0_9GAMM1.730e-8252.57DNA polymerase III subunit gamma/tau n=1 Tax=Legio... [more]
A0A7U8GS56_NEPCE1.660e-8153.44DNA polymerase III subunit gamma/tau n=1 Tax=Neptu... [more]
A0A0S2TDD6_9GAMM1.390e-8052.85DNA polymerase III subunit gamma/tau n=1 Tax=Candi... [more]
A0A7C1CZL7_9GAMM4.300e-7952.11DNA polymerase III subunit gamma/tau n=1 Tax=Thioa... [more]
A0A136HL23_9GAMM5.620e-7951.97DNA polymerase III subunit gamma/tau n=2 Tax=Neptu... [more]
B8GPJ3_THISH1.360e-7850.76DNA polymerase III subunit gamma/tau n=2 Tax=Thioa... [more]
A0A369CDM3_9GAMM1.730e-7853.94DNA polymerase III subunit gamma/tau n=1 Tax=Thioa... [more]
A0A661F1N4_9GAMM1.780e-7853.54DNA polymerase III subunit gamma/tau n=3 Tax=Gamma... [more]
A0A0S8A910_9GAMM2.710e-7850.35DNA polymerase III subunit gamma/tau n=1 Tax=Gamma... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig73340contigM-pyrifera_M_contig73340:2..817 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score268.9
Seed ortholog evalue2.7e-69
Seed eggNOG ortholog207954.MED92_01871
Preferred namednaX
KEGG rclassRC02795
KEGG koko:K02343
KEGG ReactionR00375,R00376,R00377,R00378
KEGG Pathwayko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440
KEGG ModuleM00260
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030234,GO:0030337,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0042575,GO:0042802,GO:0043170,GO:0043846,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050790,GO:0061695,GO:0065007,GO:0065009,GO:0071704,GO:0090304,GO:0098772,GO:1901360,GO:1901576,GO:1902494,GO:1990234
EggNOG free text desc.DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
EggNOG OGs1MVCK@1224,1RMIA@1236,1XHPB@135619,COG2812@1,COG2812@2
EC2.7.7.7
COG Functional cat.L
Best tax levelOceanospirillales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03032,ko03400
Exons1
Model size816
Cds size816
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816630.5710342-CDS-M-pyrifera_M_contig73340:1..8171622816630.5710342-CDS-M-pyrifera_M_contig73340:1..817Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig73340 2..817 +
1692278087.5870512-CDS-M-pyrifera_M_contig73340:1..8171692278087.5870512-CDS-M-pyrifera_M_contig73340:1..817Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig73340 2..817 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig73340.17391.1prot_M-pyrifera_M_contig73340.17391.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig73340 2..817 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig73340.17391.1

>prot_M-pyrifera_M_contig73340.17391.1 ID=prot_M-pyrifera_M_contig73340.17391.1|Name=mRNA_M-pyrifera_M_contig73340.17391.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=272bp
LLNNVQYAPVHGNYKVYIIDEVHMLSGHSFNALLKTLEEPPPHVIFILAT
TDPQRLPITVLSRCLQFHLKQLSPECIKNYLAKIMDLEQISADDLALTLI
AEAADGSMRDALSLLDQALMGSETQLADTTVREMLGSVAPVKLQTLLQHI
QQNAAQAAIDWTTDSANNGIDFFTLTDDLLQFLHTAAIAQTVPDSIPKTQ
ANYSAIYAIANSLSPEELQLYYEIVLLNKKNLPYAASPRQGFEMMVLRLL
AFCPQKKTASAKASPTKKKNP*
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mRNA from alignment at M-pyrifera_M_contig73340:2..817+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig73340.17391.1 ID=mRNA_M-pyrifera_M_contig73340.17391.1|Name=mRNA_M-pyrifera_M_contig73340.17391.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=816bp|location=Sequence derived from alignment at M-pyrifera_M_contig73340:2..817+ (Macrocystis pyrifera P11B4 male)
TTACTCAACAACGTACAATACGCGCCCGTGCACGGAAATTACAAAGTCTA CATTATTGATGAAGTCCATATGCTATCCGGCCACAGCTTTAATGCTTTGC TCAAAACATTGGAAGAGCCCCCACCACATGTAATTTTTATTCTCGCAACA ACCGATCCGCAACGCTTACCGATTACTGTTTTATCGCGTTGCCTGCAATT CCACTTAAAACAATTATCACCTGAATGCATCAAAAACTACCTGGCGAAAA TCATGGACTTAGAGCAAATCAGCGCTGATGATCTGGCTCTAACGTTGATT GCAGAAGCGGCCGACGGCAGTATGCGTGACGCCTTAAGTCTTTTGGATCA AGCACTCATGGGTAGTGAGACGCAATTAGCAGATACCACTGTTCGAGAAA TGTTGGGTTCTGTAGCACCAGTGAAATTACAAACTTTATTACAACATATT CAGCAAAATGCTGCGCAAGCAGCCATTGATTGGACTACAGACAGTGCCAA CAATGGCATTGATTTTTTCACGCTAACCGATGACTTGCTGCAATTTTTGC ATACCGCAGCAATTGCGCAAACTGTGCCTGATAGCATACCAAAAACTCAA GCAAACTATTCTGCAATTTATGCCATTGCCAACTCTCTTAGCCCTGAAGA ATTACAGCTGTACTATGAAATCGTGCTACTGAACAAAAAAAATCTTCCCT ATGCTGCATCACCACGCCAAGGCTTTGAAATGATGGTGCTACGCCTATTG GCTTTTTGTCCGCAAAAGAAAACTGCATCCGCAAAAGCAAGCCCCACTAA AAAAAAAAATCCATAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig73340:2..817+

>mRNA_M-pyrifera_M_contig73340.17391.1 ID=mRNA_M-pyrifera_M_contig73340.17391.1|Name=mRNA_M-pyrifera_M_contig73340.17391.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1632bp|location=Sequence derived from alignment at M-pyrifera_M_contig73340:2..817+ (Macrocystis pyrifera P11B4 male)
TTACTCAACAACGTACAATACGCGCCCGTGCACGGAAATTACAAAGTCTA
CATTATTGATGAAGTCCATATGCTATCCGGCCACAGCTTTAATGCTTTGC
TCAAAACATTGGAAGAGCCCCCACCACATGTAATTTTTATTCTCGCAACA
ACCGATCCGCAACGCTTACCGATTACTGTTTTATCGCGTTGCCTGCAATT
CCACTTAAAACAATTATCACCTGAATGCATCAAAAACTACCTGGCGAAAA
TCATGGACTTAGAGCAAATCAGCGCTGATGATCTGGCTCTAACGTTGATT
GCAGAAGCGGCCGACGGCAGTATGCGTGACGCCTTAAGTCTTTTGGATCA
AGCACTCATGGGTAGTGAGACGCAATTAGCAGATACCACTGTTCGAGAAA
TGTTGGGTTCTGTAGCACCAGTGAAATTACAAACTTTATTACAACATATT
CAGCAAAATGCTGCGCAAGCAGCCATTGATTGGACTACAGACAGTGCCAA
CAATGGCATTGATTTTTTCACGCTAACCGATGACTTGCTGCAATTTTTGC
ATACCGCAGCAATTGCGCAAACTGTGCCTGATAGCATACCAAAAACTCAA
GCAAACTATTCTGCAATTTATGCCATTGCCAACTCTCTTAGCCCTGAAGA
ATTACAGCTGTACTATGAAATCGTGCTACTGAACAAAAAAAATCTTCCCT
ATGCTGCATCACCACGCCAAGGCTTTGAAATGATGGTGCTACGCCTATTG
GCTTTTTGTCCGCAAAAGAAAACTGCATCCGCAAAAGCAAGCCCCACTAA
AAAAAAAAATCCATAGTTACTCAACAACGTACAATACGCGCCCGTGCACG
GAAATTACAAAGTCTACATTATTGATGAAGTCCATATGCTATCCGGCCAC
AGCTTTAATGCTTTGCTCAAAACATTGGAAGAGCCCCCACCACATGTAAT
TTTTATTCTCGCAACAACCGATCCGCAACGCTTACCGATTACTGTTTTAT
CGCGTTGCCTGCAATTCCACTTAAAACAATTATCACCTGAATGCATCAAA
AACTACCTGGCGAAAATCATGGACTTAGAGCAAATCAGCGCTGATGATCT
GGCTCTAACGTTGATTGCAGAAGCGGCCGACGGCAGTATGCGTGACGCCT
TAAGTCTTTTGGATCAAGCACTCATGGGTAGTGAGACGCAATTAGCAGAT
ACCACTGTTCGAGAAATGTTGGGTTCTGTAGCACCAGTGAAATTACAAAC
TTTATTACAACATATTCAGCAAAATGCTGCGCAAGCAGCCATTGATTGGA
CTACAGACAGTGCCAACAATGGCATTGATTTTTTCACGCTAACCGATGAC
TTGCTGCAATTTTTGCATACCGCAGCAATTGCGCAAACTGTGCCTGATAG
CATACCAAAAACTCAAGCAAACTATTCTGCAATTTATGCCATTGCCAACT
CTCTTAGCCCTGAAGAATTACAGCTGTACTATGAAATCGTGCTACTGAAC
AAAAAAAATCTTCCCTATGCTGCATCACCACGCCAAGGCTTTGAAATGAT
GGTGCTACGCCTATTGGCTTTTTGTCCGCAAAAGAAAACTGCATCCGCAA
AAGCAAGCCCCACTAAAAAAAAAAATCCATAG
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