mRNA_M-pyrifera_M_contig7328.17381.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig7328.17381.1
Unique NamemRNA_M-pyrifera_M_contig7328.17381.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig7328.17381.1 vs. uniprot
Match: D8LKT8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKT8_ECTSI)

HSP 1 Score: 259 bits (663), Expect = 1.900e-81
Identity = 154/337 (45.70%), Postives = 193/337 (57.27%), Query Frame = 1 
Query:    1 QVLQDRESRPAATELMMQHGERSVRLARDGQLQELKHVVSQCPRGEMLTWFSVRMFEQACINNRLQIVRYMVSHGLDVGFLALLDAVHWVVAGCDEQLGGRDVIPTLDFLVSEAGMPVSAQRKSDFRTPLHVAVQRGLFEASLRLIELGADINAVAKVGD------DVMPLNLAEQDTDPGPAAAAHRDTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYAGTGEGASETPTFSSAVAA--AAVPENRARICKVLVERGARRTWRRGPSERQVSLDKKYADLMKGGDGDGRTFCTFNG 987
            QV ++R+S P  TELMM+ G+  VR AR+G+L+++  V   CPRGEML WF+VRMF++AC +N LQ +R+MV HGLDV F A+L+AVHW+V GCDE+  G DV+P +DFLV+EAGMP   QRKSDFRTPLHVAV+RGLFEA+ RLIELGAD+NAVAK+        DVMPL LAE+   P           T                                                                  + G     S +P+  S      + V  +RARIC++LVERGARR WRR PSE QV+LDKKYA L++G DG  R FCTF+G
Sbjct:   10 QVRRERDSDPIKTELMMRRGQLLVRFAREGRLRDMDQVSRSCPRGEMLAWFTVRMFKEACAHNHLQTMRFMVDHGLDVEFHAVLEAVHWLVDGCDEEQDGIDVVPAIDFLVTEAGMPPDVQRKSDFRTPLHVAVRRGLFEAARRLIELGADVNAVAKMAPLGNAKGDVMPLTLAEE---PAETDGFRATDDTSPEAGDDVATKGKAAEIAAGAAAVNRYHLTRNDGARDEQGVREEDHDVERMSLAAERGRQCGEETSHVGGVGARSPSPSSRSLCRRRWSRVMASRARICEILVERGARRGWRRAPSEEQVALDKKYAVLLEGDDG--RNFCTFSG 341
[Close]
BLAST of mRNA_M-pyrifera_M_contig7328.17381.1 vs. uniprot
Match: A0A6H5L1X8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1X8_9PHAE)

HSP 1 Score: 220 bits (560), Expect = 2.060e-65
Identity = 142/345 (41.16%), Postives = 182/345 (52.75%), Query Frame = 1 
Query:    4 VLQDRESRPAATELMMQHGERSVRLARDGQLQELKHVVSQCPRGEMLTWFSVRMFEQACINNRLQIVRYMVSHGLDVGFLALLDAVHWVVAGCDEQLGGRDVIPTLDFLVSEAGMPVSAQRKSDFRTPLHVAVQRGLFEASLRLIELGADINAVAKVGD------DVMPLNLAEQDTDPGPAAAAHRDTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYAGTGEGASE---------TPTFSSAVAA--AAVPENRARICKVLVERGARRTWRRGPSERQVSLDKKYADLMKGGDGDGRTFCTFNG 987
            V ++R+S P  TE MM+ G+  VR AR+G+L+++  V S CPRGE+L WF+VRMF++AC +NRLQ +R+MV HGLDV F A+L+AVHW+V GCDE+  G DV+P +DFLV+EAGMP                VQRGLFEA+ RLIELGAD+NAVAK+        DVMPL LAE+  +     A   DT+                                                                     G+G              +P+  S      + V  +RARIC +LVERGARR WRR PSE QV+LDKKYA L++G DG  R FCTF+G
Sbjct:   60 VRRERDSDPIKTERMMRRGKLLVRFAREGRLRDMDQVSSSCPRGEILAWFTVRMFKEACTHNRLQTMRFMVDHGLDVEFHAVLEAVHWLVDGCDEEQDGMDVVPAIDFLVTEAGMPPD--------------VQRGLFEAARRLIELGADVNAVAKMAPLGNAKGDVMPLTLAEEPAETNGFRATD-DTSPEARDDVGTEGQAAEIAAGASAVNGYYYLTRNNGARDEQGVREEEHDVERMSLAAERGRQCGDETSHVGGSGXXXXXXXXXXXXXXSPSSRSLCRRRWSRVTASRARICGILVERGARRGWRRAPSEEQVALDKKYAVLLEGDDG--RNFCTFSG 387
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BLAST of mRNA_M-pyrifera_M_contig7328.17381.1 vs. uniprot
Match: A0A0P1A917_PLAHL (Ankyrin repeat-containing domain n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A917_PLAHL)

HSP 1 Score: 107 bits (267), Expect = 1.800e-23
Identity = 65/166 (39.16%), Postives = 97/166 (58.43%), Query Frame = 1 
Query:    1 QVLQDRESRPAATELMMQHGERSVRLARDGQLQELKHVVSQCPRGEMLTWFSVRMFEQACINNRLQIVRYMVSHGLDVGFLALLDAVHWVVAGCDEQLGGRDVIPTLDFLVSEAGMPVSAQRKSDFRTPLHVAVQRGLFEASLRLIELGADINAVAKVGDDVMPLN 498
            Q+L  R+   AA   ++ +G+  V + RDG L+ L   V Q   G++LT+++VRMF +AC   RL I+ YM+ +G D+    + D +H ++   D       V P + FL++ AG+ V+ QRKSD  T LHVA  + L+  S  L+  GAD+NAVA   DD MPL+
Sbjct:   17 QMLSKRDPESAAN--LVANGKFLVNIVRDGNLRALMCAVEQLQEGQVLTFYAVRMFREACAIKRLDILHYMLQNGFDLQQSYMWDTLHSIIETVDSNHSAELVQPLIRFLLN-AGIDVNWQRKSDLFTALHVACCKNLYSISYLLVIYGADVNAVA--ADDAMPLS 177
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BLAST of mRNA_M-pyrifera_M_contig7328.17381.1 vs. uniprot
Match: A0A225W5B3_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W5B3_9STRA)

HSP 1 Score: 100 bits (250), Expect = 4.580e-21
Identity = 60/163 (36.81%), Postives = 92/163 (56.44%), Query Frame = 1 
Query:   16 RESRPAATELMMQHGERSVRLARDGQLQELKHVVSQCPRGEMLTWFSVRMFEQACINNRLQIVRYMVSHGLDVGFLALLDAVHWVVAGCDEQLGGRDVIPTLDFLVSEAGMPVSAQRKSDFRTPLHVAVQRGLFEASLRLIELGADINAVAKVGDDVMPLNLA 504
            RE  P +   ++ +G+  V  A +G L+ L+  V     G++L +++VRMF  AC   RL ++R+M+ +G D+   ++ D +H VV   D         P + FL+ +AG+ V+ QRKSD  T LHVA  + LF  +  L+  GAD+NA+A   DD MPL  A
Sbjct:   20 RERDPESAANLVANGKLLVEFAHNGNLRALQCAVEHLEEGQVLIFYAVRMFRDACTMRRLDVLRFMLLNGFDIQQSSMKDILHTVVENVDSLQSADATQPLIRFLL-DAGVDVNWQRKSDLYTALHVACCKNLFPIAYLLVLYGADVNAIA--ADDSMPLACA 179
[Close]
BLAST of mRNA_M-pyrifera_M_contig7328.17381.1 vs. uniprot
Match: D0MS03_PHYIT (Uncharacterized protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0MS03_PHYIT)

HSP 1 Score: 99.4 bits (246), Expect = 9.430e-21
Identity = 57/160 (35.62%), Postives = 92/160 (57.50%), Query Frame = 1 
Query:   16 RESRPAATELMMQHGERSVRLARDGQLQELKHVVSQCPRGEMLTWFSVRMFEQACINNRLQIVRYMVSHGLDVGFLALLDAVHWVVAGCDEQLGGRDVIPTLDFLVSEAGMPVSAQRKSDFRTPLHVAVQRGLFEASLRLIELGADINAVAKVGDDVMPL 495
            RE  P + E ++ +G+  V   R+G L+ L+        G+ML +++VRMF +AC   R+ I+++M+ +G D+    + D +H V+   D       V P + FL+ +AG+ V+ QRK+D  T LHVA  + L+  +  L+  GAD+NA+A   DD MPL
Sbjct:   20 RERDPESAENLVANGKLLVDFVRNGNLRALQCAAEHLGEGQMLIFYAVRMFREACAGRRMDILQFMLLNGFDLQQSYMRDILHSVIENVDSPQSAEAVQPLIRFLL-DAGVDVNWQRKADLYTALHVACCKNLYPIAYLLVLYGADVNAIA--ADDSMPL 176
[Close]
BLAST of mRNA_M-pyrifera_M_contig7328.17381.1 vs. uniprot
Match: A0A3R7KFT7_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7KFT7_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 2.620e-20
Identity = 53/153 (34.64%), Postives = 89/153 (58.17%), Query Frame = 1 
Query:   16 RESRPAATELMMQHGERSVRLARDGQLQELKHVVSQCPRGEMLTWFSVRMFEQACINNRLQIVRYMVSHGLDVGFLALLDAVHWVVAGCDEQLGGRDVIPTLDFLVSEAGMPVSAQRKSDFRTPLHVAVQRGLFEASLRLIELGADINAVAKV 474
            RE  P +   ++ +G+  V+ A+DG L+ L+        G++L ++ VR+F +AC   RL ++R+M+ +G D+    + D +H VV G D         P + FL+ +AG+ ++ QRKSD  T LHVA ++ L+  +  L+  GAD+NA+A V
Sbjct:   20 REQDPQSAANLVANGKLLVQFAQDGNLRALQCAAEHLDEGQVLIFYVVRVFREACRAQRLDVLRFMLLNGFDLQQSCVRDVLHSVVGGIDSPESADAAQPLVRFLL-DAGVDINWQRKSDLYTALHVACRKNLYSIAYLLVLYGADVNAIAGV 171
[Close]
BLAST of mRNA_M-pyrifera_M_contig7328.17381.1 vs. uniprot
Match: A0A6G0WSI9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WSI9_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 7.570e-20
Identity = 57/164 (34.76%), Postives = 96/164 (58.54%), Query Frame = 1 
Query:   34 ATELMMQHGERSVRLARDGQLQELKHVVSQCPR--GEMLTWFSVRMFEQACINNRLQIVRYMVSHGLDVGFLALLDAVHWVVAGCDEQLGGRDVIPTLDFLVSEAGMPVSAQRKSDFRTPLHVAVQRGLFEASLRLIELGADINAVAKVGDDVMPLNLAEQDTD 519
            A E ++ + +  V LA  G++  LK ++         +LT++ V+MF++A +  R+ ++++MV +G DV    + D +H V+  C ++     + P L FL+ +A M V+ QRK D  TPLHVA  +     +  L+  GAD+NA+AK  +D+MPLN AE+ +D
Sbjct:   26 AAENVLSNSKLMVELAAGGEVGALKEMIHAVDALDAHVLTYYYVKMFQEASLRRRMDVLKFMVDNGFDVNHPFVKDTLHRVIEECSDEHLDDTLQPLLHFLL-QAQMDVNFQRKRDLFTPLHVACAKTFLGVASILVMYGADVNAIAK--EDLMPLNCAERVSD 186
[Close]
BLAST of mRNA_M-pyrifera_M_contig7328.17381.1 vs. uniprot
Match: W2QEL4_PHYPN (Uncharacterized protein n=8 Tax=Phytophthora parasitica TaxID=4792 RepID=W2QEL4_PHYPN)

HSP 1 Score: 97.4 bits (241), Expect = 7.770e-20
Identity = 58/163 (35.58%), Postives = 91/163 (55.83%), Query Frame = 1 
Query:   16 RESRPAATELMMQHGERSVRLARDGQLQELKHVVSQCPRGEMLTWFSVRMFEQACINNRLQIVRYMVSHGLDVGFLALLDAVHWVVAGCDEQLGGRDVIPTLDFLVSEAGMPVSAQRKSDFRTPLHVAVQRGLFEASLRLIELGADINAVAKVGDDVMPLNLA 504
            RE  P +   ++ +G+  V   RDG L+ L+        G+ML +++VRMF +AC   RL I+R+M+ +G D+    + D +H ++   D       V P + FL+ +AG+ V+ QR SD  T LHVA  + L+  +  L+  GAD+NA+A   +D MPL  A
Sbjct:   20 RELDPESAANLVANGKLLVDFVRDGNLRALECAAEYLEEGQMLIFYTVRMFREACATRRLDILRFMLLNGFDLQQSYMRDVLHSIIDNIDSPQSADAVQPLIRFLL-DAGVDVNWQRTSDLYTALHVACCKNLYPIAYLLVLFGADVNAIA--ANDSMPLACA 179
[Close]
BLAST of mRNA_M-pyrifera_M_contig7328.17381.1 vs. uniprot
Match: H3GMK4_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GMK4_PHYRM)

HSP 1 Score: 95.1 bits (235), Expect = 7.980e-20
Identity = 56/160 (35.00%), Postives = 88/160 (55.00%), Query Frame = 1 
Query:   16 RESRPAATELMMQHGERSVRLARDGQLQELKHVVSQCPRGEMLTWFSVRMFEQACINNRLQIVRYMVSHGLDVGFLALLDAVHWVVAGCDEQLGGRDVIPTLDFLVSEAGMPVSAQRKSDFRTPLHVAVQRGLFEASLRLIELGADINAVAKVGDDVMPL 495
            RE  P +   ++ +G+  V    DG L+ L+    Q   G++L ++ VRMF +AC   RL I+R+++ +G D+      D +H V+   D       V P + FL+ +AG+ V+ QRKSD  T LHVA  + L+     L+  GAD+NA+A VG  V+ +
Sbjct:   20 REQDPESAANLVANGKLLVDFTHDGNLRALQCAAEQLEEGQVLMFYVVRMFREACSTRRLDILRFLLLNGFDLQQSYTRDVLHGVIESIDSPQRADAVQPLIRFLL-DAGVDVNWQRKSDLYTALHVACCKNLYPIVYLLVLYGADVNAIAAVGIKVIQI 178
[Close]
BLAST of mRNA_M-pyrifera_M_contig7328.17381.1 vs. uniprot
Match: A0A6A3S9Q7_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3S9Q7_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 1.110e-19
Identity = 58/163 (35.58%), Postives = 91/163 (55.83%), Query Frame = 1 
Query:   16 RESRPAATELMMQHGERSVRLARDGQLQELKHVVSQCPRGEMLTWFSVRMFEQACINNRLQIVRYMVSHGLDVGFLALLDAVHWVVAGCDEQLGGRDVIPTLDFLVSEAGMPVSAQRKSDFRTPLHVAVQRGLFEASLRLIELGADINAVAKVGDDVMPLNLA 504
            RE  P +   ++ +G+  V   R+G L+ L+        G+ML +++VRMF +AC   RL I+R+++ +G D+    + D +H V+           V P + FL+ +AG+ V+ QRKSD  T LHVA  + L+  +  L+  GAD+NA+A   DD MPL  A
Sbjct:   20 REQDPESATNLVANGKLLVDFVREGNLRALQCAAEHLEEGQMLIFYAVRMFREACALRRLDILRFLLFNGFDLQQSYMRDILHGVIESIHSPQSADAVQPLIRFLL-DAGVDVNWQRKSDLYTALHVACCKNLYPIAYLLVLFGADVNAIAV--DDAMPLACA 179
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7328.17381.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
D8LKT8_ECTSI1.900e-8145.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L1X8_9PHAE2.060e-6541.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0P1A917_PLAHL1.800e-2339.16Ankyrin repeat-containing domain n=1 Tax=Plasmopar... [more]
A0A225W5B3_9STRA4.580e-2136.81Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
D0MS03_PHYIT9.430e-2135.63Uncharacterized protein n=1 Tax=Phytophthora infes... [more]
A0A3R7KFT7_9STRA2.620e-2034.64Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A6G0WSI9_9STRA7.570e-2034.76Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
W2QEL4_PHYPN7.770e-2035.58Uncharacterized protein n=8 Tax=Phytophthora paras... [more]
H3GMK4_PHYRM7.980e-2035.00Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A6A3S9Q7_9STRA1.110e-1935.58Uncharacterized protein n=5 Tax=Phytophthora TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7328contigM-pyrifera_M_contig7328:386..7932 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score261.9
Seed ortholog evalue4e-67
Seed eggNOG ortholog2880.D8LKT8
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Ankyrin repeat
EggNOG OGs2BD6S@1,2S11V@2759
Ec32 ortholog descriptionAnkyrin repeat-containing domain
Ec32 orthologEc-11_005490.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size990
Cds size990
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7328.17381.1prot_M-pyrifera_M_contig7328.17381.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig7328 386..7932 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816629.8029928-CDS-M-pyrifera_M_contig7328:385..4681622816629.8029928-CDS-M-pyrifera_M_contig7328:385..468Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7328 386..468 +
1692278087.0458937-CDS-M-pyrifera_M_contig7328:385..4681692278087.0458937-CDS-M-pyrifera_M_contig7328:385..468Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7328 386..468 +
1622816629.8175564-CDS-M-pyrifera_M_contig7328:1665..17831622816629.8175564-CDS-M-pyrifera_M_contig7328:1665..1783Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7328 1666..1783 +
1692278087.0661023-CDS-M-pyrifera_M_contig7328:1665..17831692278087.0661023-CDS-M-pyrifera_M_contig7328:1665..1783Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7328 1666..1783 +
1622816629.83222-CDS-M-pyrifera_M_contig7328:3857..40191622816629.83222-CDS-M-pyrifera_M_contig7328:3857..4019Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7328 3858..4019 +
1692278087.0760226-CDS-M-pyrifera_M_contig7328:3857..40191692278087.0760226-CDS-M-pyrifera_M_contig7328:3857..4019Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7328 3858..4019 +
1622816629.8446271-CDS-M-pyrifera_M_contig7328:5429..55431622816629.8446271-CDS-M-pyrifera_M_contig7328:5429..5543Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7328 5430..5543 +
1692278087.0845375-CDS-M-pyrifera_M_contig7328:5429..55431692278087.0845375-CDS-M-pyrifera_M_contig7328:5429..5543Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7328 5430..5543 +
1622816629.8562317-CDS-M-pyrifera_M_contig7328:7089..74171622816629.8562317-CDS-M-pyrifera_M_contig7328:7089..7417Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7328 7090..7417 +
1692278087.097086-CDS-M-pyrifera_M_contig7328:7089..74171692278087.097086-CDS-M-pyrifera_M_contig7328:7089..7417Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7328 7090..7417 +
1622816629.866863-CDS-M-pyrifera_M_contig7328:7747..79321622816629.866863-CDS-M-pyrifera_M_contig7328:7747..7932Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7328 7748..7932 +
1692278087.107496-CDS-M-pyrifera_M_contig7328:7747..79321692278087.107496-CDS-M-pyrifera_M_contig7328:7747..7932Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7328 7748..7932 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig7328.17381.1

>prot_M-pyrifera_M_contig7328.17381.1 ID=prot_M-pyrifera_M_contig7328.17381.1|Name=mRNA_M-pyrifera_M_contig7328.17381.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=330bp
QVLQDRESRPAATELMMQHGERSVRLARDGQLQELKHVVSQCPRGEMLTW
FSVRMFEQACINNRLQIVRYMVSHGLDVGFLALLDAVHWVVAGCDEQLGG
RDVIPTLDFLVSEAGMPVSAQRKSDFRTPLHVAVQRGLFEASLRLIELGA
DINAVAKVGDDVMPLNLAEQDTDPGPAAAAHRDTATAKGTSTGTATASFA
ATAPFTARATGKNTGTAADADADAAADAAADADADADADADAETNTSAGA
KEYAGTGEGASETPTFSSAVAAAAVPENRARICKVLVERGARRTWRRGPS
ERQVSLDKKYADLMKGGDGDGRTFCTFNG*
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mRNA from alignment at M-pyrifera_M_contig7328:386..7932+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig7328.17381.1 ID=mRNA_M-pyrifera_M_contig7328.17381.1|Name=mRNA_M-pyrifera_M_contig7328.17381.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=7547bp|location=Sequence derived from alignment at M-pyrifera_M_contig7328:386..7932+ (Macrocystis pyrifera P11B4 male)
CAGGTTCTCCAAGACAGAGAAAGCCGTCCTGCCGCAACGGAGCTGATGAT
GCAACACGGCGAGCGCTCGGTTCGGTTGGCGAGGTGGGGCACATACGAGA
GAAAGCCGTGCGGTTGGTCAAGTGCTGTGACGCTGCTGTGGCCCCGGTCG
TTCGTTCTTATGCAAATGATCCTGTCTATGGATATTGATGATGACGATGA
TGTTCTCACATTGGCTCATTTCCCTGAAATCCTGCCTGTGGTCACAAAAC
AGGCTGTGGCAAAAATCCATATCGATAAGAGAAAAAAAACAAGTACGAAA
TAGTGCACACGGCAGTATCATACCACTACGTGAGGGAAACGGTACTCACG
AGCTGTGTAGTATACCACCCCGCATCACTTGCGACCAAATAACACCAGGA
GCATATCCATGGTATTATATATAGACCAGAGCAAAAACAACAAACAAACA
AAAACACGAAGAGGAGTAGAAACAAAACAGAAAGAAAAAAAGAAAGGGAA
AAGAAAAGGAGGAGCAGAAAAAAGAAGAAAACGAAGAAACATGCGCTCAG
GGCGCAGGCCGAATCCCGAGGACAAGGTTTCTGTTTGCTGGTACGACCAG
TCGTATGATATGATATGTCCAGCTGATGGACCAACATCAGGACGTCACAA
AAATACCAGACGGAAGGCAAGCACACAAGAAGAGGGTAGAGACAAAGAGC
TTACAACAAACGAAAACGAGCAGTCCTATGTCCAGCTGGTAGATCAAGGA
CGATACAACAGACACGAAGAAGACATGAAACAGATGTACTATTAACAGGG
GTTGGAAGGGGCCTCTCCGCCCCAATGGCAGAGTGGTCATAATTTGGATT
GAGCAGCTCGTCCGAACATACTATTGATACGAAACGTAAGAAGTGAAGTT
ATAGGAAACACATACGAGTCGTTGACACTAAAATAAAAAACTTTAAATAA
TCGATCTACATCCTAGCTACAATGGATTACTGTAGTGTCATAGAATGCTT
CGACTGCCACTTAGCGAAATACTCGTAGACTAATCTCGTGCATTACTACG
AGTGTGCGTACCCTGTATGCATACGTACGTAGTGTACACAAGGGATATTC
AATATTCTATTCGAGTTCGCCAATATTGTAGAGCAATCACCTCCGGTGCA
GGTATTCTGAAAAACCGTCTCCTTCTTTATATCTCTCTCGCTCCTCCCCT
CCCCCCCCTTCTTTATGTCTGTCTGGCTGGCTGTCTGTCTGCATTTCCTC
TCTCCTCCCCTCCCCTTTCTCTCTTTACAGAGACGGCCAACTGCAGGAGC
TTAAGCATGTGGTGAGCCAATGCCCAAGGGGGGAGATGCTGACGTGGTTC
TCGGTGCGCATGTTCGAGCAGGCCTGCATCAACAACCGCCTACAAATAGT
AAGGACGCGAGCGTTCAGAAGGACACTCGAACCCGTTTGTTGGTTGTGTT
TATTCACCCTTGTAGAATAGCCCTATGAACAAGAAATATCCTACTACTGT
AAGAACGTAAGGCTCATTTATTGGGGGAACGCTGAGAACTACCAGTATCG
ATTAATAAATCGTGCTCAGCGGCGAACTCTGCACTAAACATTATGCAACA
GCCCAAGCTCAAGGTTGTGTTCAAGCAAGGATGGTGTCGCCATGAGGTTC
TAAGGCTCTGCTCAGATTATCCAGGTGTTTTTTGTTAGCGGGCATGCACT
GTAGTCAAGTCAAAGCGTGGACATATGAATTAAGGCGTCAGTGATTCCTC
ATCATGGCAGACGATATCGCCTGCCCACAGGCCGGAAATAACGTCTGCCA
GGAACACTGAGGGCATGCTTGCTACAAATCGTAACGCCGCTAGAGGCGAC
AGGGGGATGCCACACAACAGAGTACCAACAGCGATCGGCTTATTCTCTGT
CGTTCAACACCAACACCGATAGCAGGGGGTTTGCGTCACTCAGAGAGGGG
ATACCAGAACAGAGAACCAAAAACCAAAACGGATGCACCTTCTGCCCGAA
CATGCCAACGGATATATTTCCTTCGCGATACCGCGGCTTGTCTCTTTTTC
GTCCTTCCTGGGTGAATGCTCTGCCCGTACCATGATACACACCGGCGGGT
GTATTCCCTTCACTAAACCCGCGGCTTGCCTCTCTGTTCGTCCTTTTACA
ACACGCAAACGCCACCCACGCGCGCTCGGCTCCTTCCTGCGACCACGGAC
GCAAAAAATTAAGTTGAGGTACACGGTCAGCCACAGCGACGCGGCCTCGA
CGTTGGTGTCCACGTCGTGTCGGACGCCGAGCAAAGATTCTCGTTTGCCT
ATTGCGCGGGGGCATATATTAACCAGAACCCGGAATGGACCCCGAAAGCC
ATGTATCCCCCTATGCTCACACGCCATCTTTGGTTCTGACCACGATTACG
GGGGGGGCATAGTAAATAGGACTACATATTGTCAGTAAACATACGTAAAT
ATGTACTTTTTTGTGTGTACCATAGGTCCTATGGTCCCCCGTAGTACTGC
ATGTTTTACACACCTAGTTCGAGTTCTGGTTACCGTGTTTTACACACCAT
ATTTATGGTACTGCTTTGAATGAGGCTGAAAGCCCGGTAATTACCTGGGT
TCAGGTATTGGGATCGTATTTGTAGCACTTGGGAGGTGTATCTTAGTAAT
AATAGATGTAAAACCAGGGGTTTTCCCAGCGGGAGGCACGAGCTTTGCTC
TCAGTCTCCGCGTGCACGAAAGGAATAAAAAAGTTGCTCTTCTTTTATCT
CTCAGCAAACAACACACGTGATTACCGACGAGTACCGGCTTAATAGGCAA
ACCTGTCTAGGGATACAAAGTGTCCCGACCTTGATCTTGACAAGTGGCAT
CTTCATCTTGAGACTTTTTCGAGTTTCAATACTGTGTTCACAGTAGTAGC
AGGCAACCGACTCGATTTTAGAATACCGTGGAATTTTAGGCGCTACAGCA
ATGCTACCGATTTATCATCAAGGCAGCAGGCCATATCGATACCGCTTGCC
AGGTACATCGGGGGGGGGAGAAACCCTTCCTGTAGACCATAACGCTGCTA
TGTAGGGGGGGATGCCCATGCCCATCTCCACCACCAGCTCTTTTTTTCCC
TCTAACACCGCCGCGTCGAACTCGATTGTATCGCCCACCCCCACAGTATA
GCGCGGATAGCAGTGGCATGGGTAACTCAGAAAGGGGATACCCACAACGG
ACTGGCGCCAGCAAGCAAACAGCTACACATTCTGCCCATGCCAACGGATT
TACGGTAGTTCCTTCACACCACCTATGCCCTATCGCTTGTCCCCCTCGTC
GTCCTTTTCACGCTACACGCGGGTACATTTCCTGCCCATACCATGCCGAC
GGATATTTCTACTTCACCCCATACGTTCCGCGTCTGTCTCTCTCGTCGCC
CTTCTCTTCACTCATACCAAGTGACGCGCGCTCGCTCGGCTCCTTCCTCT
GTGACCCCCGGACGCTGAACAGGTGAGATACATGGTCAGCCACGGCCTCG
ACGTTGGCTTCCTCGCCCTGCTGGACGCCGTGCACTGGGTGGTGGCGGGC
TGCGACGAACAGTTGGGCGGGAGGGACGTGATTCCTACCCTCGACTTCCT
CGTGTCAGAGGCCGGCATGCCCGTGAGCGCGCAGGTATGTACCGTACTTG
GCCTGAAGCGACCGACCGACCGACCGACCGACCAATCGATCGACCGGGAT
CCAACGCAACACTGCTAGTTGCGAGTACCCTGCTGCGCGGGTTCTTTAAC
TACAGCCTTTTACAGCACAACTCATCCAACCTGACAGCTATAATTATCTT
CACCAGGATAACCGCTGTTGACTAATCGCATTGTACAGCCCCCTTTGCAG
CGTAGCTCTGGTACTGCTCACGAATGTACTGCCCTTGCTCGTACGTAGTC
TAACCCAGCATCACCGGGTTATCGCTGCAAGTACACCTGCGGTCGGCGCT
GCCAATTCCACCACCCCCAAGCTTCAATCCGGAATTGCTCGTTTCGTTCA
CAATGTCACATTATTTTGTTTTTGCTTTATTCCTCGAGGTGTTTACATGC
GTACAGCAGTATCGTACGTAGAGGAAGTCCGACTGCTACACCTCCTAAGT
CTGGGTTCCAAAAAGGTCTACCCATGGCAGCTTATCAACAACGACAGATT
CACTCCAAGCTTCAGTCCGCGTTCCCTCGTTCGTTCATGTCGCCTCCGAG
TTTTTCATTCGAGACGTGTATTGTTTTTTTGTACGTATCATGCGTACCGG
ATCAGGGCCGTGAGCAAGAGGCATGCCTTGTGCTGGGCTTTCACGGGCAG
TTATTGGTTGGAAGTCGAAGGAAGCAAACTATCAGCCAGGCGCTGCAGGT
AGTGCTTCGGTTTTATCAACGAAAAAAAGCAATTCGTCCCAACAAACAAA
CGCGCGCAGTCAGGTACGAAAAGGCGCAAAGTAACTCCGCCAAATTACCG
CACGCCACCAACCATAAAAACTGACCGGCACCCAACTACGTAATAAATAC
CTTGAACCGTTTTAGAACTGCAGTCCCATTTGGAGGATAAACCACTCACA
CCCCAAGTAATTCGTCCCCCAAATGGAACTTCAGTCCTGTTTCGGGGGAC
CGTAATAAACAGGACCAAATATTGTCAGTAAAAATTGGTAAATACATAGG
GTTTGGTGTGTACCATAGGTCCTATTTACTGTGGACCCCCGTAATAAAAA
AGGTCTACGAACCCTTTCTAGTGCTGCAGTCCCGTTTTGGAGACCAACTA
CTTAGAATTTGAGTGATTTCCACCCGAAACGGGACTGCAATCCTAAAAAA
AGGGTCAGGTCGGCGACTTTAGAGTCAGCCTAGTGCGGGAGGTCTGGCTT
TTACGCCTACCTACGCACGTCTGGGGGTCCCCAAAGGAATACACCACGCA
GACAACCTCCCCAAACTTTAACCGACCAACCTTCGTCTGTTTTTTTTTTC
TTCCGTCGCCCTCTTTTCCCCTTGTGTTTTTGTGTGTGTGTGCGTGTGTG
TGTGTGTGTTTTTTTTCCCCTGGACGTGCACGTCACGAACGTAGAGGAAG
TCCGATTTTCGCACGCCCCTTCACGTGGCCGTTCAGAGAGGTCTTTTCGA
GGCCTCGCTTCGACTGATCGAGCTAGGAGCAGACATCAACGCAGTCGCTA
AGGTGGGAGTGATGCGATTGACCACACCTAACAAATATACCAAATAATAG
GAGGGAGTGATTGTATAGGGGTGGGTGGGCAGTTGGTTGGGTAGGGGGGG
ACGGGGGTGTACTCGATATCACGTATGGCCGCAATCGTATGACCATGGAC
TCTCCCGTCCCTATACACAATACCGGTACGAAGCACTTCGGGTTTTCATC
GACCAGGAGGTACATCGCTTGCACCAAGCGCGAAGCGCCCGTGAGGTGTT
GATCGAGTCGCATGAAGGGTGAGCTGCATCCTACAAAAAAAAAACGCGTT
TGAAGCGGATTTTTTTGCATATGGATGACAGCGTCAATGAATTGATCGAT
TGTCTGGTGTGGCCACTTCCAGAGACAGCAATGGGTTTACATTGTAACTG
CCTCGTGGGTGCCATACCACATTCACACTACGTGATGCGATCATTCCCCT
TGTGCGGACTGTTCTCCACCCCGCACAAATGATCTATGACTCGATCGCCA
GCTGTGGTCGACCGCTAAAAGAAACTAAAAAAACGGTACCCTGCTTGTCT
AGCTCACGTAGTGAGCGGCATGTTTTACAGCGTCGTTGCCAACCGACGCC
AAATCAACCTATAGGGGGGTGGGAGATAAGGCGCGCGCGGGGGGGGGGGG
TGTACTCGATAGGAGAGATTTACTCGATCTCATGCATGGCCGTAGTCGTA
TGACCATAGACCCTCGCATCCCTACAATGCCGGGGCAGGTAAAGGGGGGA
GGGAGTGGGTGGACGGGGAGAGAAGGGGGGTGGGTGGGGGGGGCATGTAC
CAACGCCGTGGCTGAGGCGTGAGCGGCCCTCACCATACCCACCATGTGTT
TGAAAAGGATGGAAGGACAGGAGAGAACGGGATATGCGTCTTTGTGGCGG
TAGATGAATGGGGGGTGAAGGGTAAGGATAGTTGGGGGTGGGAGTAGGTG
GGGGAAGGTGGGTGGAGGGGTGGAAGGGTGGATGGGTGGGTGGGTGAGTG
GGTGAGTGGCTGGCTGGGTGGGGTGTGGCAATAGTGCTGTCCCGCTCCTA
GTAAAATAGCGCAGGAGCAGAGCGGAGGCTGACTACCGTTTGTTTATTGT
TGATTGCACGGTTGATTTCAGGTACAAATCGACGGAGTGTCGCCCCGCAT
TCTTTGGGGTTTGTTGTTATTTCACGACGACCGCTGCCGTGCTGTGCACT
ACATCCTTGCGTACCCGGTATTCAGCATGCAGCGGTCGACGACGAAACAA
TAACGGCGACCCCTTTGCTTGCAAAATACAAAAAGAGCGCTCGTGTGTCG
CTGTGTCCATGTTTCGAACCACCCACGCTGCGCGATGCCAAGCAGCAGCG
AGCGGCAGAAAAACGGGGCGCTGTTGTGCTGTGTCGATGTTTCGAAACGC
GCGCACTATACGCGATGCCAAGGAAGCAGCGGCAACGAGGTCCCGGCCAA
CACACACAAAAGCATCGTACGTAACACTCACGAGGAGAGTGGCACGCACC
ATTTTTATTCCGTTTTTCGTTGCGCGTGCCAAAACAATACACTCCCGCCC
TCAGGACGATGTCATGCCGCTTAACCTCGCGGAACAGGACACAGATCCAG
GCCCGGCCGCAGCCGCACACAGAGACACAGCCACAGCCAAAGGCACAAGC
ACAGGCACAGCCACGGCCTCATTCGCAGCCACGGCCCCATTCACAGCAAG
GGCCACCGGCAAAAACACAGGCACAGCCGCAGACGCAGATGCAGACGCAG
CCGCAGACGCAGCCGCAGACGCAGATGCAGACGCAGACGCAGACGCAGAC
GCAGAGACAAATACATCCGCGGGCGCAAAAGAATACGCAGGCACAGGCGA
AGGCGCGAGTGAGACACCAACATTTTCATCTGGTGAAACGGACCACGCAA
ACGGAGACGCCGCCTCCGCCGCAGCCGCCGCAGCCGCAGCCGCAGCCGCA
GCCGCAGCCGCAGTATCAGTAGCAGAGAGCCGCCACGCTTGTCAGGCAGC
GGAGAAATACGGAGGAGCAGGAAAAAACAAGAACTCCCCCTGTCAGCGCC
CCGCCGCTAAAAGTGCTTGCGCTGGTGACTATCGCCAGGTGGTGGCGGAG
GAAGGGGCGGGGGCGGAGGCGGGGGCGGCGGGGGCAGCGGTAAAGGAGGC
GGGAGCGGGAGCGGGAATAGCAATGGCGATGGCGGGAGGGGGGGCGGGGG
CGGAGGCGGCAGCGGTGGCGGCGGCGGCAGTGCCGGAGAACCGTGCGCGG
ATCTGCAAGGTTTTGGTGGAGAGAGGCGCCAGGCGGACGTGGAGGCGGGG
GCCGAGCGAGCGCCAGGTCTCACTGGACAAGAAGTACGCCGACCTGATGA
AGGGAGGCGATGGTGATGGCCGCACTTTTTGCACCTTCAACGGCTAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig7328:386..7932+

>mRNA_M-pyrifera_M_contig7328.17381.1 ID=mRNA_M-pyrifera_M_contig7328.17381.1|Name=mRNA_M-pyrifera_M_contig7328.17381.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1980bp|location=Sequence derived from alignment at M-pyrifera_M_contig7328:386..7932+ (Macrocystis pyrifera P11B4 male)
CAGGTTCTCCAAGACAGAGAAAGCCGTCCTGCCGCAACGGAGCTGATGAT
GCAACACGGCGAGCGCTCGGTTCGGTTGGCGAGCAGGTTCTCCAAGACAG
AGAAAGCCGTCCTGCCGCAACGGAGCTGATGATGCAACACGGCGAGCGCT
CGGTTCGGTTGGCGAGAGACGGCCAACTGCAGGAGCTTAAGCATGTGGTG
AGCCAATGCCCAAGGGGGGAGATGCTGACGTGGTTCTCGGTGCGCATGTT
CGAGCAGGCCTGCATCAACAACCGCCTACAAATAAGACGGCCAACTGCAG
GAGCTTAAGCATGTGGTGAGCCAATGCCCAAGGGGGGAGATGCTGACGTG
GTTCTCGGTGCGCATGTTCGAGCAGGCCTGCATCAACAACCGCCTACAAA
TAGTGAGATACATGGTCAGCCACGGCCTCGACGTTGGCTTCCTCGCCCTG
CTGGACGCCGTGCACTGGGTGGTGGCGGGCTGCGACGAACAGTTGGGCGG
GAGGGACGTGATTCCTACCCTCGACTTCCTCGTGTCAGAGGCCGGCATGC
CCGTGAGCGCGCAGGTGAGATACATGGTCAGCCACGGCCTCGACGTTGGC
TTCCTCGCCCTGCTGGACGCCGTGCACTGGGTGGTGGCGGGCTGCGACGA
ACAGTTGGGCGGGAGGGACGTGATTCCTACCCTCGACTTCCTCGTGTCAG
AGGCCGGCATGCCCGTGAGCGCGCAGAGGAAGTCCGATTTTCGCACGCCC
CTTCACGTGGCCGTTCAGAGAGGTCTTTTCGAGGCCTCGCTTCGACTGAT
CGAGCTAGGAGCAGACATCAACGCAGTCGCTAAGGTGGGAAGGAAGTCCG
ATTTTCGCACGCCCCTTCACGTGGCCGTTCAGAGAGGTCTTTTCGAGGCC
TCGCTTCGACTGATCGAGCTAGGAGCAGACATCAACGCAGTCGCTAAGGT
GGGAGACGATGTCATGCCGCTTAACCTCGCGGAACAGGACACAGATCCAG
GCCCGGCCGCAGCCGCACACAGAGACACAGCCACAGCCAAAGGCACAAGC
ACAGGCACAGCCACGGCCTCATTCGCAGCCACGGCCCCATTCACAGCAAG
GGCCACCGGCAAAAACACAGGCACAGCCGCAGACGCAGATGCAGACGCAG
CCGCAGACGCAGCCGCAGACGCAGATGCAGACGCAGACGCAGACGCAGAC
GCAGAGACAAATACATCCGCGGGCGCAAAAGAATACGCAGGCACAGGCGA
AGGCGCGAGTGAGACACCAACATTTTCATCTGGACGATGTCATGCCGCTT
AACCTCGCGGAACAGGACACAGATCCAGGCCCGGCCGCAGCCGCACACAG
AGACACAGCCACAGCCAAAGGCACAAGCACAGGCACAGCCACGGCCTCAT
TCGCAGCCACGGCCCCATTCACAGCAAGGGCCACCGGCAAAAACACAGGC
ACAGCCGCAGACGCAGATGCAGACGCAGCCGCAGACGCAGCCGCAGACGC
AGATGCAGACGCAGACGCAGACGCAGACGCAGAGACAAATACATCCGCGG
GCGCAAAAGAATACGCAGGCACAGGCGAAGGCGCGAGTGAGACACCAACA
TTTTCATCTGCGGTGGCGGCGGCGGCAGTGCCGGAGAACCGTGCGCGGAT
CTGCAAGGTTTTGGTGGAGAGAGGCGCCAGGCGGACGTGGAGGCGGGGGC
CGAGCGAGCGCCAGGTCTCACTGGACAAGAAGTACGCCGACCTGATGAAG
GGAGGCGATGGTGATGGCCGCACTTTTTGCACCTTCAACGGCTAGCGGTG
GCGGCGGCGGCAGTGCCGGAGAACCGTGCGCGGATCTGCAAGGTTTTGGT
GGAGAGAGGCGCCAGGCGGACGTGGAGGCGGGGGCCGAGCGAGCGCCAGG
TCTCACTGGACAAGAAGTACGCCGACCTGATGAAGGGAGGCGATGGTGAT
GGCCGCACTTTTTGCACCTTCAACGGCTAG
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