mRNA_M-pyrifera_M_contig7323.17374.1 (mRNA) Macrocystis pyrifera P11B4 male
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig7323.17374.1 vs. uniprot
Match: A0A6H5KRC0_9PHAE (N-acetyltransferase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRC0_9PHAE) HSP 1 Score: 536 bits (1382), Expect = 4.890e-180 Identity = 334/673 (49.63%), Postives = 395/673 (58.69%), Query Frame = 1 Query: 295 SLMRGSWKKHETPSSDARRLEGVIESVVKIASRADVFAVELVPKARPRRKEQQQGEVPPRGIVLKTRKRLQRFYARVLAERALFRTSPP----KSAVYGNPLMLVGMGALLSRRDCETILDEAQEKKDWGHWDGDLGGDSEAVSLERLPLSRALWSGQAGDAVRARIADIYRVKQSSVAVKAGDVFVCKAGPEGCG-RAEMQGRWRQRRTGRREATID---------------ITPQQQQKLSAAIEFRRSKSLVSFCVALTAEETP---SWAVCVEQRRQCLRPNGQGAGVVFSGKLRHACVTVSPETSAEARSGASGGDSTQATPPVVLLRGFASIQHPSVRADVGRWRWGSPAWHVDAPWIKDQDILDRAWIGGDGSVGGV-------PEVVGATVEGVTPPAETVAAPGSYSYLERMNTSVAHRYYRQGLGGMDVPIGDPLGRPVIDLVEDG----SSW---LPGSKKPDEVTISAVLRRRFPWDRRRQVG---------------------------------------KAGLSTAAGASPIMDAALQELFGASQEG--TATVAAAAAAAGDR----------LVHVPVPPIKYVFVDPRYRGLGLGRRLFLEAMRSLARRGFRFALIIVEDNGSGGLFGFYEEMGFARADELLGLPRAMIAPIPPPD 2049 S MR + K+H +D R LE IESVVKI SR+++ V L QQ+ V K R+ L+R YAR + AL RT P S GNPLM VG+G L+S RDC TI+ EA + DW WDGDLG + SLE+LP SRALW G+AGD VRAR+A +Y V++SS+ V A +FVCK G G R E+ + R G +D Q A +FRRS+SL++F VA++ E+ WAVC+EQR +C RP GQG GV+FSGKLRHA + + A A SG S Q PP +LLRGFA+I+HP V RW+WGSPAWH+DAPWI+DQDILDR W+ G +G P GA A P +YL+RMNT++AHRYYRQGL GMDVP+ D GRPVIDLVEDG S W + G+ KP EVT+ AVLRRRFPW RRRQV KAGLSTAAGASP MDAALQ+LFG+S AGD LV V VPPIKYVFVDPRYRGLGLG+RLFLEAMRSLARRGFRFALI+VEDNG+GGLFGFYE+MGF RA+E LGLPRAMIAPIPPPD Sbjct: 3 STMREAGKEHGPLLADQRVLEREIESVVKIISRSEMSTVWL----------QQRDRTGEANTVSKARRNLRRLYARARSTWALSRTQPSYPDATSLPAGNPLMRVGLGGLMSPRDCNTIVREALQVDDWTPWDGDLGKHALGTSLEKLPRSRALWDGKAGDRVRARVAGLYGVQESSIVVNA--LFVCKVGLNVDGLRDEVLREGQGRSVGTLHEAVDRAAAXXXXXXXXXXXXXXXXXQLSIEASDFRRSRSLLTFSVAISTEDALLPCPWAVCLEQRGECFRPGGQGTGVIFSGKLRHASLRIPHGAGAPASSGNSERP-RQDHPPALLLRGFANIRHPLVAEGSARWQWGSPAWHIDAPWIRDQDILDRVWVAGGTDLGAEAADGRHPPPAGGAAAASEAGTAPAGVDPPRSNYLQRMNTTLAHRYYRQGLAGMDVPVVDSAGRPVIDLVEDGGGGSSLWRRGVIGADKPGEVTLKAVLRRRFPWSRRRQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAGLSTAAGASPRMDAALQQLFGSSSTSYXXXXXXXEQVVAGDSPLAARQQVSPLVGVTVPPIKYVFVDPRYRGLGLGKRLFLEAMRSLARRGFRFALIVVEDNGTGGLFGFYEDMGFVRAEEELGLPRAMIAPIPPPD 662
BLAST of mRNA_M-pyrifera_M_contig7323.17374.1 vs. uniprot
Match: D8LFR9_ECTSI (N-acetyltransferase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFR9_ECTSI) HSP 1 Score: 475 bits (1223), Expect = 2.320e-158 Identity = 300/622 (48.23%), Postives = 345/622 (55.47%), Query Frame = 1 Query: 295 SLMRGSWKKHETPSSDARRLEGVIESVVKIASRADVFAVELVPKARPRRKEQQQGEVPPRGIVLKTRKRLQRFYARVLAERALFRT---SPPKSAV-YGNPLMLVGMGALLSRRDCETILDEAQEKKDWGHWDGDLGGDSEAVSLERLPLSRALWSGQAGDAVRARIADIYRVKQSSVAVKAGDVFVCKAGPEGCGRAEMQGRWRQRRTGRREATIDITPQQQQKLSAAIEFRRSKSLVSFCVALTAEETPSWAVCVEQRRQCLRPNGQGAGVVFSGKLRHACVTVSPETSAEARSGASGGDSTQATPPVVLLRGFASIQHPSVRADVGRWRWGSPAWHVDAPWIKDQDILDRAWIGGDGSVGG---------------VPEVVGATVEGVTPPAETVAAPGSYSYLERMNTSVAHRYYRQGLGGMDVPIGDPLGRPVIDLVEDG--SSW----LPGSKKPDEVTISAVLRRRFPWDRRRQVGKAGLSTAAGASPIMDAALQELFGASQEGTA--------TVAA----AAAAAGDRLVHVPVPPIKYVFVDPRYRGLGLGRRLFLEAMRSLARRGFRFALIIVEDNGSGGLFGFYEEMGFARADELLGLPRAMIAPIPPPD 2049 S MR + K+H +D R LE IESVVKI SR+++ V L QQ+ V K R+ L+R YAR + AL RT SP +++ GN LM VG+G L+S RDC TI+ EA + DW WDGDLG + SLE LPLSRALW G+ G+ C RP GQG G++FSGKLRHA + + A A SG S G S Q PPV+LLRGFASIQHPSV + RW+WGSPAWH+DAPWI+DQDILDR W+ +G G GV PP SY YL+RMNT++AHRYYRQGL GMDVP+ D GRPVIDLVEDG SSW + G+ KP EVT+ AVLRRRFPW RRRQVGKAGLST AGASP MDAALQ+LFG+ VA AA G LV VPVPPIKYVFVDPRYRGLGLG+RLFLEAMRSLARRGFRFALI+VEDNG+GGLFGFYE+MGF RA+E LGLPRAMIAPIPPPD Sbjct: 3 SAMREAGKEHGPLVADQRLLEREIESVVKIISRSEMSTVWL----------QQRDRTGEANTVSKARQNLRRLYARARSAWALSRTPTSSPDATSLPAGNSLMRVGLGGLISPRDCNTIVREALKVDDWAPWDGDLGTRALGTSLENLPLSRALWDGKRGE-----------------------------------------------------------------------------------------------------CFRPGGQGTGIIFSGKLRHASLRIPHGDGAPAGSGNSEG-SRQEHPPVLLLRGFASIQHPSVAEESARWQWGSPAWHIDAPWIRDQDILDRVWVASGSDLGAEAADGRHPXXXXXXXXXXXXGTAPAGVDPPR-------SY-YLQRMNTTLAHRYYRQGLAGMDVPVVDSAGRPVIDLVEDGGVSSWWRRGVIGADKPGEVTLKAVLRRRFPWSRRRQVGKAGLSTDAGASPRMDAALQQLFGSXXXXXXXXXXXXXXVVAGDSPLAARQQGSPLVGVPVPPIKYVFVDPRYRGLGLGKRLFLEAMRSLARRGFRFALIVVEDNGTGGLFGFYEDMGFVRAEEELGLPRAMIAPIPPPD 504
BLAST of mRNA_M-pyrifera_M_contig7323.17374.1 vs. uniprot
Match: A0A835ZI96_9STRA (N-acetyltransferase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI96_9STRA) HSP 1 Score: 169 bits (427), Expect = 3.120e-41 Identity = 172/551 (31.22%), Postives = 241/551 (43.74%), Query Frame = 1 Query: 442 KEQQQGEVPPRGIVLKTRKRLQRFYARVLAERALFRTSPPKSAVYGNPLMLVGMGALLSRRDCETILDEAQEKKDW---GHWDGDLGGDSEAVSLERLPLSRALWSGQAGDAVRARIADIYRVKQSSVAVKAGD---VFVCKAGPEGCGRAEMQGRWRQRRTGRREATIDITPQQQQKLSAAI--------EFRRSKSLVSFCVALTAEETPSWA-VCVEQRRQCLRPN-GQGAGVVFSGKLRHACVTVSPETSAEARSGASGGDSTQATPPVVL---LRGFASIQHPSVRADVGRWRWGSPAWHVDAPWIKDQDILDRAWIGGDGSVGGVPEVVGATVEGVTPPAETVAAPGSYSYLERMNTSVAHRYYRQGLGGMDVPIGDPLGRPVIDLVEDGSSWLPGSKKPDEVTISAVLR----RRFPW-----DRRRQVGKAGLSTAAGASPIMDAALQELFGASQEGTATVAAAAAAAGDRLVHVPVPPIKYVFVDPRYRGLGLGRRLFLEAMRSLARRGFRFALIIVEDNGSGGLFGFYEEMGFARADELLG 2010 K QQ + P R V K + R + + AE A F+T+ +GNPL V +GA +R + + A E + W L D V++ LP+ LW +RA + + AV+ D + V G E R + + +A P L+AA + + L+SF V L + A + +E + LR + G + KLRH TV+ SA + A G ++ P ++ L G A + HP++R D+ WR G+PAWHVD PW+++ ++LDR W D + GG PA++ A+ G L ++ AHRY RQ G + L +G K DE T+ A RR W RR +G+AG + G+S MD A+ ELFG Q G + A VPV P+ YV+VDPRYRG GLGRRLFL M LA G +A+I V DNG GGL FYE MG+ A LG Sbjct: 59 KRTQQHKSPQR--VWKALRERHRVHRALAAEPAAFKTTTDG---HGNPLERVTLGAF-ARLEPDKSSRLAAELQRWCMDAQQQSSLSNDLMTVNVAELPMVSELWDATLQHGLRAALGAACGLPPC--AVRFADTPRLHVLLRGVEPPPREDERCN---------DAAAVTVPALMSYLAAARGDQGSGGGSYGGAAGLMSFYVPLALSGAEAAATLSLELQDSGLRFELARDTGALLCSKLRH---TVTLNVSAPHGTAADRGSASPREPGAIVAAVLFGTAHLVHPALRGDIEHWRDGAPAWHVDRPWLRNSEVLDRCWRV-DPAQGGA---CALQQRSDAAPADSTASEGQRFALTPLD-GAAHRYLRQR--------GSAAPEVTLQLQREG--------KTDEYTMHAYAECPGPRRRAWRGTNKQRRICIGRAGFRSTTGSSAAMDTAIWELFGG-QGGLSAPPRA----------VPVAPVVYVYVDPRYRGFGLGRRLFLACMSELAAMGVGYAVITVLDNGGGGLLPFYEGMGYRDASTHLG 557
BLAST of mRNA_M-pyrifera_M_contig7323.17374.1 vs. uniprot
Match: A0A836CMF2_9STRA (N-acetyltransferase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMF2_9STRA) HSP 1 Score: 158 bits (400), Expect = 6.140e-38 Identity = 116/320 (36.25%), Postives = 159/320 (49.69%), Query Frame = 1 Query: 1087 QGAGVVFSGKLRHACVTVSPETSAEARSGASGGDSTQATPPVV---LLRGFASIQHPSVRADVGRWRWGSPAWHVDAPWIKDQDILDRAWIGGDGSVGGVPEVVGATVEGVTPPAETVAAPGSYSYLERMNTSVAHRYYRQGLGGMDVPIGDPLGRPVIDLVEDGSSWLPGSKKPDEVTISAVLR----RRFPW-----DRRRQVGKAGLSTAAGASPIMDAALQELFGASQEGTATVAAAAAAAGDRLVHVPVPPIKYVFVDPRYRGLGLGRRLFLEAMRSLARRGFRFALIIVEDNGSGGLFGFYEEMGFARADELLG 2010 +G G + KLRH T + +A + A G ++ P + +L G A + HP++R D+ WR G+PAWHVD PW+++ ++LDR W D + GG PA++ A+ G L ++ + AHRY RQ G + L +G K +E T+ A +R W RR +G+AG + G+S MDAA+ LFG Q G + A R+V PV P+ YV+VDPRYRG GLGRRLFL M LA G +A+I V DNG GGL FYE MG+ A LG Sbjct: 222 RGTGALLCSKLRH---TATLHVNAPHGTAADRGSASPHEPGAIAAAVLCGTAHLVHPALRGDIEHWRDGAPAWHVDRPWLRNSEVLDRCWRV-DPAQGGA---CALQQRSDAAPADSTASEGQRFALTLLDCA-AHRYLRQR--------GSAAPEVTLQLQREG--------KTEEYTMRAYAECPGPQRRAWFRTNKQRRICIGRAGFRSTTGSSAAMDAAIWGLFGG-QGGLS--------APQRMV--PVAPVVYVYVDPRYRGFGLGRRLFLACMSELAAMGVGYAVITVLDNGGGGLLPFYEGMGYRDASAHLG 506
BLAST of mRNA_M-pyrifera_M_contig7323.17374.1 vs. uniprot
Match: A0A7S2ETE7_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2ETE7_TRICV) HSP 1 Score: 61.2 bits (147), Expect = 3.900e-7 Identity = 39/113 (34.51%), Postives = 65/113 (57.52%), Query Frame = 1 Query: 1651 RRRQVGKAGLSTAAGA-SPIMDAALQELFGASQEGTATVAAAAAAAGDRLVHVPVPPIKYVFVDPRYRGLGLGRRLFLEAMRSL-ARRGFRFALIIVEDNGSGGLFGFYEEMG 1983 R++++ + G++T G SP++DAA+ +++G G A I Y+FV+P +RG GLG L LEA+ ++ A +G F +++ +D+GSG L G+YEE G Sbjct: 88 RKKKIARFGITTQRGPPSPVIDAAVLDIYGVDFAGVGAAA-----------------IVYMFVEPEFRGRGLGD-LALEAIGAIHAAQGCDFTVLVADDDGSGKLVGWYEERG 182 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7323.17374.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 5 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig7323.17374.1 >prot_M-pyrifera_M_contig7323.17374.1 ID=prot_M-pyrifera_M_contig7323.17374.1|Name=mRNA_M-pyrifera_M_contig7323.17374.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=587bp MRGSWKKHETPSSDARRLEGVIESVVKIASRADVFAVELVPKARPRRKEQback to top mRNA from alignment at M-pyrifera_M_contig7323:3481..7208- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig7323.17374.1 ID=mRNA_M-pyrifera_M_contig7323.17374.1|Name=mRNA_M-pyrifera_M_contig7323.17374.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3728bp|location=Sequence derived from alignment at M-pyrifera_M_contig7323:3481..7208- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig7323:3481..7208- >mRNA_M-pyrifera_M_contig7323.17374.1 ID=mRNA_M-pyrifera_M_contig7323.17374.1|Name=mRNA_M-pyrifera_M_contig7323.17374.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=3522bp|location=Sequence derived from alignment at M-pyrifera_M_contig7323:3481..7208- (Macrocystis pyrifera P11B4 male)back to top |