mRNA_M-pyrifera_M_contig73140.17359.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig73140.17359.1 vs. uniprot
Match: A0A5A8DG58_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DG58_CAFRO) HSP 1 Score: 154 bits (389), Expect = 1.160e-39 Identity = 85/234 (36.32%), Postives = 135/234 (57.69%), Query Frame = 1 Query: 10 PIFALSERKIEIVEMFELFVGTRAKLVYIVCVALYIGGAIWGYSAVFGIALSTHFPLGIGE------RWTYVIYTLIFASVVITVACFDLREQIGFQMALTVVRIVVFTIMFVTVLVAMGRGGGEE----FGSPHAADWGERDVTAPVFFFGSKGVFSISGLARLVPIVVYSQLFHTGAAVLAQPLKNKTNVHKVWGTTYLITTTFYVLASGTVALFFGNKVAESSNILWEGYG 681 P F +S RKIE+VE+ + GT A VY+ V+ Y+ GA+W Y+AVFG + FP + + R +Y +Y +F V ++++ +REQ+ FQ+ +T VR+VVF M +T ++A+ + F + + T FG+ V +++ + +VP+VVY+QLFHTG AVL +PL++K V V+G TYL+TT+ Y++ T A+ FG+ A S + W YG Sbjct: 250 PEFLISHRKIELVELVQRTSGTTAARVYLFLVSAYLYGAMWSYAAVFGESFVNRFPFPLDDDPAEARRLSYFVYEGVFGLVAVSMSLLGIREQVSFQLVMTGVRVVVFGSMVITAIIALASADAPDPTGGFDLAGFSGFDPATATVEQVLFGAGRVITLASVGLVVPVVVYAQLFHTGTAVLVEPLRDKRAVGTVFGATYLVTTSVYLVIGATCAVLFGSSAAPSIQVNWVNYG 483
BLAST of mRNA_M-pyrifera_M_contig73140.17359.1 vs. uniprot
Match: A0A7R9VXW2_9STRA (Hypothetical protein n=2 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VXW2_9STRA) HSP 1 Score: 124 bits (311), Expect = 2.530e-29 Identity = 70/232 (30.17%), Postives = 128/232 (55.17%), Query Frame = 1 Query: 16 FALSERKIEIVEMFELFVGTRAKLVYIVCVALYIGGAIWGYSAVFGIALSTHFPLGIGERWTYVIYTLIFASVVITVACFDLREQIGFQMALTVVRIVVFTIMFVTVLVAMGRGGGEEFGSPHAADWGERDVTAPVFFFGSKGV-----FSISGLARLVPIVVYSQLFHTGAAVLAQPLKNKTNVHKVWGTTYLITTTFYVLASGTVALFFGNKVAESSNILWEGY--GTGK 690 + + ERK E VE+ +F+G + ++ YI +++ I +WGY++VF A++T P+ Y +YTLIF S+V+ ++C DL+EQ+ FQ+ LT+ R +V +M +T VA G G+ PV+F G+ G SG + ++VYS +FH VL++P+ +K ++ ++ +++ + + +A +FG+ + +S+N+ WE + GTG+ Sbjct: 154 YEVKERKFEYVELCRIFLGVKGEIAYITAISVSICAQLWGYTSVFSSAMATTVPIQKDFGHDYTVYTLIFGSIVVPLSCLDLKEQVQFQLFLTLCRFIVIGLMVLTTFVACVEGLTGVEGNK------------PVYFVGTDGPVGAKWIDFSGFYEMFSVLVYSAMFHNAIPVLSEPVADKRTLNTIFRDAFIVCGGAFWVIGYIIAWYFGDHIEQSANLNWEYFVGGTGR 373
BLAST of mRNA_M-pyrifera_M_contig73140.17359.1 vs. uniprot
Match: A0A7S4NCR2_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NCR2_9STRA) HSP 1 Score: 109 bits (273), Expect = 5.210e-24 Identity = 77/230 (33.48%), Postives = 124/230 (53.91%), Query Frame = 1 Query: 13 IFALSERKIEIVEMFELFVGTRAKLVYIVCVALYIGGAIWGYSAVFGIALSTHFPLGIGERW-TYVIYTLIFASVVITVACFDLREQIGFQMALTVVRIVVFTIMFVTVLVA--MGRGGGEEFGSPHAADWGERDVTAPVFFFGSKGVFSISGLARLVPIVVYSQLFHTGAAVLAQPLKNKTNVHKVWGTTYLITTTFYVLASGTVALFFGNKVAESSNILWEGY--GTG 687 + + E+K E+ E+ ++F+G Y V V L + G +W Y++VFG A+ FP+ +GE +Y ++ +FA +V+ ++ L EQ Q+ L+ RI++ +M +T +VA M G + SP +GE +T P +F+ S + ++PI+V+S LFH LA + K+ V+G T+++ Y L VA +FG V ESSNI WE Y GTG Sbjct: 179 LLIVGEKKYELTELSKMFLGRNGLKAYGVAVVLDVYGFLWAYTSVFGAAMDHSFPV-LGEGIDSYPLWVFVFALIVVPMSFLGLSEQATMQVFLSGCRIIMILLMVLTPIVAAVMTSGNNDSDMSPPNPHFGE--LTKPA----GAPMFAPSSIHEMIPILVFSVLFHQAVPGLADEITEKSTAGTVFGLTFILCGCAYSLIGVVVAWYFGEGVYESSNINWESYHGGTG 401
BLAST of mRNA_M-pyrifera_M_contig73140.17359.1 vs. uniprot
Match: A0A4D9DET5_9STRA (Aa_trans domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DET5_9STRA) HSP 1 Score: 108 bits (269), Expect = 1.370e-23 Identity = 71/224 (31.70%), Postives = 126/224 (56.25%), Query Frame = 1 Query: 13 IFALSERKIEIVEMFELFVGTRAKLVYIVCVALYIGGAIWGYSAVFGIALSTHFPLGIGER-WTYVIYTLIFASVVITVACFDLREQIGFQMALTVVRIVVFTIMFVTVLVAMGRGGGEEFGSPHAADWGERDVTAPVFFFGSKGVFSISGLARLVPIVVYSQLFHTGAAVLAQPLKNKTNVHKVWGTTYLITTTFYVLASGTVALFFGNKVAESSNILWEGYG 681 + + +RK E+ + +LF+G K++Y++C+++YI GA+ Y VF +++ FPL +Y +Y +FA +VI ++C +L EQI QMAL R+++ M +VL A G E F + V P++ + VF +PI YS ++H A L+ P+++KT + +++ T++++ FY + + VA +FG +A+SSN+ W+GYG Sbjct: 127 LLTVKKRKYEMPTLCQLFLGYHGKVLYMICLSIYIYGALLAYGTVFANSVAAMFPLPAPHADASYGVYLGLFAVLVIPLSCLELTEQISVQMALASCRLLMVASMVGSVLAACAHTG-ESFPGQ------QEPVGIPLWRWEGMPVF--------LPIACYSFIYHHSIAGLSHPVRDKTLLGQIFLATFVMSGIFYGVIALLVAYYFGPGMAQSSNLEWKGYG 335
BLAST of mRNA_M-pyrifera_M_contig73140.17359.1 vs. uniprot
Match: A0A5A8DLU9_CAFRO (Uncharacterized protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DLU9_CAFRO) HSP 1 Score: 100 bits (248), Expect = 1.490e-20 Identity = 68/221 (30.77%), Postives = 116/221 (52.49%), Query Frame = 1 Query: 70 GTRAKLVYIVCVALYIGGAIWGYSAVFGIALSTHFPLGIGER-------------WT-----YVIYTLIFASVVITVACFDLREQIGFQMALTVVRIVVFTIMFVTVLVAMGRGGGEEFGSPHAADWGERDVTAPVFFFGSKGVFSISGLARLVPIVVYSQLFHTGAAVLAQPLKNKTNVHKVWGTTYLITTTFYVLASGTVALFFGNKVAESSNILWEGY 678 G A+++Y+V VALY+ GA+WGYS+VF + + + PL + W Y I L+FA + I +AC + REQ Q+ +T RIVV ++ T L A+G G +P D ER + + G+ G RL+P+ +++ +FH A +A+P+++K + V+ T +++T Y++ + T A +F V + +++ WEGY Sbjct: 170 GRTAEILYMVGVALYLTGAMWGYSSVFSTSFAANIPLPFLDEAGRTSHVCDAEKDWANCASHYHICLLLFALMAIPLACMEFREQAAVQVTMTAARIVVLFLLVGTALGALGCDGVAFTEAP--TDPEERTAETKL----ASGL----GFLRLLPVCLFAFIFHHSAPGVAEPVRDKAALPGVFSTGFVVTGLGYLVLATTTAYYFAGSVKQQASLSWEGY 380
BLAST of mRNA_M-pyrifera_M_contig73140.17359.1 vs. uniprot
Match: A0A7S3L871_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L871_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 1.650e-20 Identity = 78/232 (33.62%), Postives = 116/232 (50.00%), Query Frame = 1 Query: 22 LSERKIEIVEMFELFVGTRAKLVYIVCVALYIGGAIWGYSAVFGIALSTHFPL-GIGERWTYVIYTLIFASVVITVACFDLREQIGFQMALTVVRIVVFTIMFVTVLVAMGRGGGEEFGSPHAADWGERDV-TAPVFFFGSKGV------FSISGLARLVPIVVYSQLFHTGAAVLAQPLKNKTNVHKVWGTTYLITTTFYVLASGTVALFFGNKVAESSNILWEGY--GTG 687 +S RK E+ E+ ++F+G L Y + +L I G +W YSAVFG A+S PL E Y I+ IFA VV+ ++ L EQ Q+ L+ RI++ +M T L A G G G D T PV FG + ++G+ ++ P VV+S +FH LA +K+K + ++G T+++ Y L A +FG V +S+NI W Y GTG Sbjct: 170 VSNRKFELTELCQIFLGKAGLLAYGISASLDIYGFLWAYSAVFGSAMSKLIPLVDDDEDRDYAIWLGIFAVVVVPMSMLHLSEQAIVQVILSGCRILMIVLMVGTPLAAAWFGSG-----------GNVDADTGPVPHFGQQAEAMGAPWVDLAGIQKMFPAVVFSLIFHQAVPGLADEMKDKPKIGLIFGYTFVLCGIAYGLLGIVGAWYFGEHVHQSANINWHQYHGGTG 390
BLAST of mRNA_M-pyrifera_M_contig73140.17359.1 vs. uniprot
Match: A0A1E7FNA3_9STRA (Aa_trans domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FNA3_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 1.050e-19 Identity = 72/221 (32.58%), Postives = 114/221 (51.58%), Query Frame = 1 Query: 28 ERKIEIVEMFELFVGTRAKLVYIVCVALYIGGAIWGYSAVFGIALSTHFPLGIGERWTYVIYTLIFASVVITVACFDLREQIGFQMALTVVRIVVFTIMFVT-VLVAMGRGGGEEFGSPHAADWGERDVTAPVFFFGSKGVFSISGLARLVPIVVYSQLFHTGAAVLAQPLKNKTNVHKVWGTTYLITTTFYVLASGTVALFFGNKVAESSNILWEGYGTG 687 + + E+ E+ ++F+G VY + VAL G +W Y++VFG A++ FPL Y +Y ++FA +V+ ++ +L EQ Q+ L+ RI M +T VL A+ G S + D T P+ GS +F +S + ++PIVVYS +FH L +K+K K++ T+ + Y L V+ +FGN+V SSNI W Y G Sbjct: 175 KHRYELTELCKIFLGDTGLKVYGISVALDCYGFLWAYASVFGAAMAHSFPLFGPGVDCYHMYVILFAIIVVPMSFLELAEQASMQIFLSGCRIACILFMIITPVLAALFESEGNMKDSIQPIAHFD-DQTEPI---GSP-LFRLSKIHEMLPIVVYSVIFHQAVPGLVDEMKDKAKAGKIFTYTFGLCGILYSLLGIIVSWYFGNQVHPSSNINWTNYHAG 390
BLAST of mRNA_M-pyrifera_M_contig73140.17359.1 vs. uniprot
Match: A0A7S4QV95_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QV95_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 1.340e-15 Identity = 68/241 (28.22%), Postives = 118/241 (48.96%), Query Frame = 1 Query: 1 DQAPIFALSERKIEIVEMFELFVGTRAKLVYIVCVALYIGGAIWGYSAVFGIALSTHFPLGIGE--RWTYVIYTLIFASVVITVACFDLREQIGFQMALTVVRIVVFTIMFVTVLVAMGRGGGEEFGS---PHAADW----GERDVTAPVFFFGSKGVFSISGLARLVPIVVYSQLFHTGAAVLAQPLKNKTNVHKVWGTTYLITTTFYVLASGTVALFFGNKVAESSNILWEGY--GTGK 690 ++ + + RK ++ E+ +F+G R + +Y V L I +W Y++VF A+ST F E + Y + +FA +VI ++ +L EQ FQ+ L+ RI++ + T +VA + + PH + G + T +F ++S L +++PI VYS +FH LA + K+ + ++ T+ Y L A +FGN + ES N+ W+GY GTG+ Sbjct: 59 EEEDLLMIQNRKFDLTELCHIFLGPRGQKIYSAYVCLDIYSYLWVYASVFANAMSTAFQTTTDEDEQDLYPWFIGLFAIIVIPMSVLELSEQTFFQVFLSGCRILMVCFLIGTPIVAAAFTTANDDSTTIIPHFNNQIHPSGINNETTTTTWF------NLSKLHQMIPIAVYSVIFHQAIPGLAHTTQQKSKIGIIFSYTFFFLGFTYALIGWIDAWYFGNGIYESCNLNWKGYHGGTGR 293
BLAST of mRNA_M-pyrifera_M_contig73140.17359.1 vs. uniprot
Match: A0A1V9Z1F8_9STRA (Transmembrane protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z1F8_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 1.190e-13 Identity = 65/213 (30.52%), Postives = 103/213 (48.36%), Query Frame = 1 Query: 40 EIVEMFELFVGTRAKLVYIVCVALYIGGAIWGYSAVF-GIALSTHFPLGIGERWTYVIYTLIFASVVITVACFDLREQIGFQMALTVVRIVVFTIMFVTVLVAMGRGGGEEFGSPHAADWGERDVTAPVFFFGSKGVFSISGLARLVPIVVYSQLFHTGAAVLAQPL--KNKTNVHKVWGTTYLITTTFYVLASGTVALFFGNKVAESSNILW 669 E+ ++ EL++G L+Y + + + G++ VF +S L G TY IFA +V+ ++C +L EQIG Q+A++VVR V M + VA+ F P G TAP + + SG L V+Y+QLFH L PL +++ ++G+ L TT+FYV T +L+FG ++ S N+ W Sbjct: 130 EVAQLCELYLGKIGALLYRISLVNLAYAGLIGFAQVFVNSFVSQSRDLFGGYALTYPASGCIFAGIVVPLSCLNLSEQIGLQVAMSVVRFVALGAMILGAFVAI-------FTDPFD---GGSQATAPPYV-NEVTLVDGSGFGLLFSTVIYAQLFHHSVPGLLAPLSRRDRGKGRFIFGSALLTTTSFYVALGVTTSLYFGPRLVSSVNLNW 331
BLAST of mRNA_M-pyrifera_M_contig73140.17359.1 vs. uniprot
Match: B3S2L0_TRIAD (Uncharacterized protein n=2 Tax=Trichoplax TaxID=10227 RepID=B3S2L0_TRIAD) HSP 1 Score: 78.2 bits (191), Expect = 4.710e-13 Identity = 54/246 (21.95%), Postives = 112/246 (45.53%), Query Frame = 1 Query: 22 LSERKIEIVEMFELFVGTRAKLVYIVCVALYIGGAIWGYSAVFGIALSTHFPLGIGERW---------------------TYVIYTLIFASVVITVACFDLREQIGFQMALTVVRIVVFTIMFVTVLVAMGRGGGEEFGSPHAADWGERD------VTAPVFFFGSKGVFSISGLARLVPIVVYSQLFHTGAAVLAQPLKNKTNVHKVWGTTYLITTTFYVLASGTVALFFGNKVAESSNILWEGY 678 +S RK EI E+ LF+G +AK+VY++ + +Y+ A W ++ V S++ P G G +Y + IFA +V++++C ++ EQ Q+ + ++R VV M + + ++ + + + D T + + + ++ + +P+ VY+Q+ H G +L +P+ K ++ + +L T Y ++ FG+KV++ S + W + Sbjct: 116 MSRRKFEITELCNLFLGDKAKIVYMLVLFVYLALACWSFTTVAASTWSSNIPFGNGSSLRQCTQEDFQDRIIPEAGGCLNSYRLCAGIFAVIVLSLSCLEVTEQKIIQIIMGILRFVVVLFMCFNSVADLTSKENKQIPFSNVSHFELMDSKHDQPYTTLTYSYTNPLYYNFRAWVQAIPVFVYAQVLHQGIPILIEPVTRKQHLRTMVVAVFLTMYTLYTFLGIVISYRFGDKVSQISTLNWSDF 361 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig73140.17359.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig73140.17359.1 >prot_M-pyrifera_M_contig73140.17359.1 ID=prot_M-pyrifera_M_contig73140.17359.1|Name=mRNA_M-pyrifera_M_contig73140.17359.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=230bp DQAPIFALSERKIEIVEMFELFVGTRAKLVYIVCVALYIGGAIWGYSAVFback to top mRNA from alignment at M-pyrifera_M_contig73140:379..1068+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig73140.17359.1 ID=mRNA_M-pyrifera_M_contig73140.17359.1|Name=mRNA_M-pyrifera_M_contig73140.17359.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=690bp|location=Sequence derived from alignment at M-pyrifera_M_contig73140:379..1068+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig73140:379..1068+ >mRNA_M-pyrifera_M_contig73140.17359.1 ID=mRNA_M-pyrifera_M_contig73140.17359.1|Name=mRNA_M-pyrifera_M_contig73140.17359.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1380bp|location=Sequence derived from alignment at M-pyrifera_M_contig73140:379..1068+ (Macrocystis pyrifera P11B4 male)back to top |