mRNA_M-pyrifera_M_contig72997.17331.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig72997.17331.1
Unique NamemRNA_M-pyrifera_M_contig72997.17331.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig72997.17331.1 vs. uniprot
Match: A0A8J5QS52_9HYME (Uncharacterized protein n=1 Tax=Cotesia typhae TaxID=2053667 RepID=A0A8J5QS52_9HYME)

HSP 1 Score: 194 bits (492), Expect = 7.290e-58
Identity = 107/246 (43.50%), Postives = 147/246 (59.76%), Query Frame = 1
Query:   16 MPEYVELMMM--DDEGVSSTTSVSQMELEELCARYWAFPSSDVALHRDNHERYLSRGLFRRSRSLQGLDASRPWLVYWRVHGLDLLGRRPGPVEREKLRRVLLEDLQSPTGGFCGGVGQEAHAAPTYSAVLALAVLSEEDGVEGLDREGLVSFFRRLKAKSGGFAMHVGGEMDVRATYTVVAVSWLTGVLGEEGLMDGVAEYIGACQTYEGGFGGEPGNEAHGGYTFSAVAALELLGRWDVVDVDA 747
            M  + EL+++  DDE   +TTSV Q  +EE C + +   + D  L R  H  +L + L + S   + LD SRPWL YW +H L+LLG +    +  K+   L +  Q P GGF GG GQ  H A TY+AV AL  +  +   + +DR+ LV FFR LK K G F+MH  GE+D+R  Y  +AV+ LT V  EE L  G  ++I  CQT+EGGFGG PG EAHGGYT+  +A+L L+G+ D  ++ A
Sbjct:   13 MRSFKELLLVTQDDEDFETTTSVEQEIVEESCLQLYKI-AEDPKLSRGRHISWLKKSLHKLSEGYECLDCSRPWLCYWSLHALNLLGEKLNEEDNTKVIDFLSK-CQDPLGGFGGGPGQFPHLASTYAAVCALCNIKSKKAYDAIDRKSLVRFFRSLKFKDGSFSMHRDGELDIRGVYCAIAVAKLTNVYSEE-LFKGTDDWISRCQTWEGGFGGCPGMEAHGGYTYCGLASLVLMGKVDKCNLSA 255          
BLAST of mRNA_M-pyrifera_M_contig72997.17331.1 vs. uniprot
Match: A0A8J6CD53_DIALT (Protein farnesyltransferase subunit beta n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CD53_DIALT)

HSP 1 Score: 198 bits (504), Expect = 9.540e-58
Identity = 112/238 (47.06%), Postives = 144/238 (60.50%), Query Frame = 1
Query:   58 VSSTTSVSQMELEELCARYW--------AFPSSDVALHRDNHERYLSRGLFRRSRSLQGLDASRPWLVYWRVHGLDLLGRRPGPVEREKLRRVL--LEDLQSPTGGFCGGV--GQEAHAAPTYSAVLALAVLSEEDGVEGLDREGLVSFFRRLKAKSGGFAMHVGGEMDVRATYTVVAVSWLTGVLGEEGLMDGVAEYIGACQTYEGGFGGEPGNEAHGGYTFSAVAALELLGRWDVV 735
            +S+ T+  Q  +EE C R +        A    +V L R+ H RYL RGL R S   Q LD+SRPWL YW +HGLDLLG     ++ E   R++  L+  Q P GG+CGG   GQ  H APTY+AV AL ++  ++ +  +DR  L +F +  K +SG + MH  GE+DVR  YT +AV+ LT +L  E L    AE+I  CQTYEGG GGEPG EAHGGYTF   AAL LLGR D +
Sbjct:   16 LSTVTTQQQASVEENCLRLYMRHLGRTNAVQRDEVHLAREEHVRYLLRGLERLSSGFQVLDSSRPWLCYWILHGLDLLGH---DLDAELGSRIVGFLKRCQDPAGGYCGGPYPGQLPHLAPTYAAVNALVIIGTDEALASIDRPALHAFLKGRKHESGYYTMHEDGEIDVRGAYTAIAVATLTNLLSNE-LTARTAEWIATCQTYEGGLGGEPGLEAHGGYTFCGTAALSLLGRLDAL 249          
BLAST of mRNA_M-pyrifera_M_contig72997.17331.1 vs. uniprot
Match: UPI0014255204 (protein farnesyltransferase subunit beta-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI0014255204)

HSP 1 Score: 196 bits (497), Expect = 5.730e-57
Identity = 107/238 (44.96%), Postives = 143/238 (60.08%), Query Frame = 1
Query:   52 EGVSSTTSVSQMELE----ELCARYWAFPSSDVALHRDNHERYLSRGLFRRSRSLQGLDASRPWLVYWRVHGLDLLGRRPGPVEREKLRRV--LLEDLQSPTGGFCGGVGQEAHAAPTYSAVLALAVLSEEDGVEGLDREGLVSFFRRLKAKSGGFAMHVGGEMDVRATYTVVAVSWLTGVLGEEGLMDGVAEYIGACQTYEGGFGGEPGNEAHGGYTFSAVAALELLGRWDVVDVDA 747
            +G  + +S+ Q ++E    E+  ++         L RD H  YL++GL   S S Q LDASRPWL YW +H L+LLG +   +  E   +V   +   Q P GGF GG GQ AH APTY+AVLALA +  ++  E ++RE L SF  R+++  GGF MH GGE+DVR  Y     + LT +   E + +G  E+I +CQTYEGGF G PG EAHGGYTF AVAAL L+G   + D +A
Sbjct:   21 DGYHTNSSIEQEKVEAKIGEIFEKFATSSMKIPKLQRDKHLAYLNKGLKNLSESYQCLDASRPWLCYWILHSLELLGEK---ISEEHASQVAQFIGKCQHPEGGFAGGPGQYAHLAPTYAAVLALATIGTKEAYEVVNREKLASFLMRMRSPDGGFLMHEGGEIDVRGAYCAAVAARLTNIATTE-MFEGTPEWIASCQTYEGGFAGIPGMEAHGGYTFCAVAALVLMGHDRLCDTEA 254          
BLAST of mRNA_M-pyrifera_M_contig72997.17331.1 vs. uniprot
Match: UPI0019393F96 (protein farnesyltransferase subunit beta-like n=1 Tax=Styela clava TaxID=7725 RepID=UPI0019393F96)

HSP 1 Score: 194 bits (492), Expect = 3.960e-56
Identity = 106/241 (43.98%), Postives = 143/241 (59.34%), Query Frame = 1
Query:   46 DDEGVSSTTSVSQMELEELCAR----YWAFPSSDVALH--RDNHERYLSRGLFRRSRSLQGLDASRPWLVYWRVHGLDLLGRRPGPVEREKLRRVLLEDLQSPTGGFCGGVGQEAHAAPTYSAVLALAVLSEEDGVEGLDREGLVSFFRRLKAKSGGFAMHVGGEMDVRATYTVVAVSWLTGV--LGEEGLMDGVAEYIGACQTYEGGFGGEPGNEAHGGYTFSAVAALELLGRWDVVDVD 744
            DDEG  + T+V Q  +EE   R    +  F   +  +H  RD+H  YL +GL R S   + LDAS+PWL YW VH L LLG      ++  + + L E  QSPTGG+ GG  Q AH APTY+AV  L +++ +D  E ++RE L+ F  +++   G F MH GGE D R+ Y  ++V+ LTG+  +  E L  G  +YI +CQTYEGG GG PG EAHGGYTF   A L +LG   ++D D
Sbjct:   18 DDEGTPTKTTVEQQRVEESVLRKLKDFEDFSDLEPGIHLKRDDHLPYLLKGLERLSEGYECLDASQPWLCYWIVHSLSLLGHELSEQQKSSVVKFL-EKCQSPTGGYGGGPEQFAHLAPTYAAVNCLCIIATDDAYESINREKLLYFLFQMRQNDGSFTMHEGGESDTRSLYCAISVASLTGLDEIAGESLFAGSPQYIVSCQTYEGGIGGCPGAEAHGGYTFCGYAGLVILGHEKLIDTD 257          
BLAST of mRNA_M-pyrifera_M_contig72997.17331.1 vs. uniprot
Match: F0Y5G6_AURAN (Protein farnesyltransferase subunit beta n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5G6_AURAN)

HSP 1 Score: 192 bits (488), Expect = 4.030e-56
Identity = 108/204 (52.94%), Postives = 129/204 (63.24%), Query Frame = 1
Query:  142 LHRDNHERYLSRGLFRRSRSLQGLDASRPWLVYWRVHGLDLLGRRPGPVEREKLRRVL--LEDLQSPTGGFCGGVGQEAHAAPTYSAVLALAVLSEEDGVEGLDREGLVSFFRRLKAKSGGFAMHVGGEMDVRATYTVVAVSWLTGVLGEEGLMDGVAEYIGACQTYEGGFGGEPGNEAHGGYTFSAVAALELLGRWDVVDVDA 747
            L R+ H  YL +GL     S   LDASRPWL YW +HG+DLL   P     EK+   +  L   +SPTGG+ GG  Q AH APTY+A LA+AVL      E +DR+GL +F   +K  SGGF MH  GE+DVR TYT +AV+ L  VL  E L +G A Y   CQTYEGGFGGEPG EAHGGY F A+AAL +L   D VD+DA
Sbjct:   10 LMRERHVAYLMKGLGGLGGSYVALDASRPWLCYWILHGMDLLDALP----EEKIDDCVATLAKCRSPTGGYGGGPQQLAHCAPTYAASLAIAVLGTRRAYESVDRKGLYAFLLSMKDPSGGFRMHDDGEVDVRGTYTALAVAALFNVLTPE-LAEGAAAYALRCQTYEGGFGGEPGVEAHGGYVFCALAALVILNATDAVDLDA 208          
BLAST of mRNA_M-pyrifera_M_contig72997.17331.1 vs. uniprot
Match: A0A7S2TFR8_9EUKA (Protein farnesyltransferase subunit beta n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TFR8_9EUKA)

HSP 1 Score: 194 bits (494), Expect = 6.930e-56
Identity = 103/239 (43.10%), Postives = 148/239 (61.92%), Query Frame = 1
Query:   52 EGVSSTTSVSQMELEELCARYWAFP-SSDVALHRDNHERYLSRGLFRRSRSLQGLDASRPWLVYWRVHGLDLLGRRPGPVEREKLRRV--LLEDLQSPTGGFCGGVGQEAHAAPTYSAVLALAVLSEEDGVEGLDREGLVSFFRRLKAKSG----GFAMHVGGEMDVRATYTVVAVSWLTGVLGEEGLMDGVAEYIGACQTYEGGFGGEPGNEAHGGYTFSAVAALELLGRWDVVDVDA 747
            + + + +S+ Q  LE LC        +S + L R+ H+ YL  GL         LDASRPW+++W +H L+LLG        E  RRV   L+  Q+P+GGF GG GQ AH APTY+A+++L +L  E+G + ++R+ +  F   +K KSG    GFA+ VGGE+D R TYT +AV+ +  ++  E L+DGVAE++   QTYEGG G EPGNEAHGGY +  +AAL ++ R D +D+ A
Sbjct:   34 DNIETASSLEQRRLERLCTDLLTRDEASPIELLRNFHQSYLVHGLTHLPGGYSSLDASRPWILFWILHSLELLGALDKLPSDEDARRVYAFLDRCQAPSGGFGGGPGQRAHLAPTYAAIMSLVILGSENGFKIVNRQKMYEFLMSVKVKSGILRGGFAVTVGGEVDTRGTYTSLAVASILNIITPE-LVDGVAEFVARNQTYEGGIGAEPGNEAHGGYAYCGLAALRIINRTDAIDLPA 271          
BLAST of mRNA_M-pyrifera_M_contig72997.17331.1 vs. uniprot
Match: A0A197K9B1_9FUNG (Protein farnesyltransferase subunit beta n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197K9B1_9FUNG)

HSP 1 Score: 193 bits (491), Expect = 9.370e-56
Identity = 109/258 (42.25%), Postives = 154/258 (59.69%), Query Frame = 1
Query:    1 LGAMEMPEYVELMMMDDEGVSSTTSVSQMELEELCARYW---------AFPSSDVALHRDNHERYLSRGLFRRSRSLQGLDASRPWLVYWRVHGLDLLGRRPGPVEREKLRRV-LLEDLQSPTGGFCGGVGQEAHAAPTYSAVLALAVLSEEDGVEGLDREGLVSFFRRLKAKSGGFAMHVGGEMDVRATYTVVAVSWLTGVLGEEGLMDGVAEYIGACQTYEGGFGGEPGNEAHGGYTFSAVAALELLGRWDVVDVD 744
            +G +   E ++    +D+GV + +S  Q+E EE   R +           P + + L +  H +Y+   L R +     LDAS+PWL YW +H LDLLG R    ER  LR +  ++ +QSPTGGF GG GQEAH A TY+AV  LA++  ++  + ++RE L  F   +K K G F M VGGE+DVR +Y  ++ + +T ++  E L    AE+I  CQTYEGG GG PG EAH GYTF  +AALELLGR D++++D
Sbjct:    1 MGVLNREEDLQTYGYNDDGVETDSSEVQLETEESIRRIFFPYTQESPMPLPIASLELRKLRHVKYVLGALDRLASHWTALDASKPWLCYWILHALDLLGYRIP--ERLALRAISTMQHIQSPTGGFGGGPGQEAHLATTYAAVNTLAIIGTKEAYDVINRETLKDFLMSVKQKDGSFTMTVGGEVDVRGSYCAMSAATITNIVTPE-LTANAAEFIARCQTYEGGIGGFPGVEAHAGYTFCGLAALELLGRTDILNLD 255          
BLAST of mRNA_M-pyrifera_M_contig72997.17331.1 vs. uniprot
Match: UPI001BB1FD65 (protein farnesyltransferase subunit beta-like n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB1FD65)

HSP 1 Score: 191 bits (486), Expect = 2.940e-55
Identity = 108/241 (44.81%), Postives = 141/241 (58.51%), Query Frame = 1
Query:   49 DEGVSSTTSVSQMELEELCARYWAFPSSDV----------ALHRDNHERYLSRGLFRRSRSLQGLDASRPWLVYWRVHGLDLLGRRPGPVEREKLRRVLLEDLQSPTGGFCGGVGQEAHAAPTYSAVLALAVLSEEDGVEGLDREGLVSFFRRLKAKSGGFAMHVGGEMDVRATYTVVAVSWLTGVLGEEGLMDGVAEYIGACQTYEGGFGGEPGNEAHGGYTFSAVAALELLGRWDVVDV 741
            D+GV ++TS  Q ++E L    +A   + +           L R  H  YL++GL   S S + LDASRPWL YW +H L+LLG +  P +   + + L +  Q P GGF GG GQ AH APTY+AVLAL+ L  E+    +DR  L S+  R+K   G F MH  GE+DVR  Y     + LT V   + + DG  E+I +CQTYEGGF G+PG EAHGGYTF +VAAL LLG   + DV
Sbjct:   20 DDGVPTSTSEQQEDVENLVDNKFAMYRARIKNLAPEDKGPVLERFKHLAYLNKGLCYLSESYEVLDASRPWLCYWILHSLELLGEKLTPEQSSNIAQFLGK-CQCPDGGFAGGPGQIAHLAPTYAAVLALSTLGTEEAYNIIDRPKLQSYLLRMKTPEGAFLMHSSGEVDVRGAYCAAVSALLTNVATPD-MFDGTPEWIVSCQTYEGGFAGQPGMEAHGGYTFCSVAALVLLGHERLCDV 258          
BLAST of mRNA_M-pyrifera_M_contig72997.17331.1 vs. uniprot
Match: A0A836CMB6_9STRA (Protein farnesyltransferase subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMB6_9STRA)

HSP 1 Score: 194 bits (493), Expect = 3.170e-55
Identity = 113/257 (43.97%), Postives = 138/257 (53.70%), Query Frame = 1
Query:   16 MPEYVELMMMDDEGVSSTTSVSQMELEELCA---------------------RYWAFPSSDVALHRDNHERYLSRGLFRRSRSLQGLDASRPWLVYWRVHGLDLLGRRPGPVEREKLRRVLLEDLQSPTGGFCGGVGQEAHAAPTYSAVLALAVLSEEDGVEGLDREGLVSFFRRLKAKSGGFAMHVGGEMDVRATYTVVAVSWLTGVLGEEGLMDGVAEYIGACQTYEGGFGGEPGNEAHGGYTFSAVAALELLGR 723
            M EY + + +  +G  + T+V Q E E  C                      R     S D+ L R  H  YL +GL         LDASRPW++YW  H LDLL       +   +    L   Q PTGGF GG  Q AH APTY+AVL L +L  E     +DR  L  FF  +K  SGGF MH  GE+DVR TYTV++++ L  +L  E L+ GVAEY+ A QTYEGGFGGEPGNEAHGGY F A A L +LGR
Sbjct:    1 MEEYYKRLEVQTDGCPTRTTVDQAECERTCTVSMLPLHMDDLSDQEVLEFQNRGILNESGDIVLMRAKHIAYLRKGLKVLPAGFVALDASRPWIIYWITHSLDLLNALRSDDDAAII--ATLASCQQPTGGFGGGPQQLAHCAPTYAAVLTLLLLGTEAAYSAVDRSALYRFFTSIKHPSGGFRMHEDGEVDVRGTYTVISIAALLNILTPE-LVQGVAEYVLAAQTYEGGFGGEPGNEAHGGYAFCAFATLGILGR 254          
BLAST of mRNA_M-pyrifera_M_contig72997.17331.1 vs. uniprot
Match: A0A6P8IMP0_ACTTE (Protein farnesyltransferase subunit beta n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8IMP0_ACTTE)

HSP 1 Score: 190 bits (483), Expect = 6.310e-55
Identity = 104/236 (44.07%), Postives = 141/236 (59.75%), Query Frame = 1
Query:   49 DEGVSSTTSVSQMELEELCARYWAFP------SSDVALHRDNHERYLSRGLFRRSRSLQGLDASRPWLVYWRVHGLDLLGRRPGPVEREKLRRVLLEDLQSPTGGFCGGVGQEAHAAPTYSAVLALAVLSEEDGVEGLDREGLVSFFRRLKAKSGGFAMHVGGEMDVRATYTVVAVSWLTGVLGEEGLMDGVAEYIGACQTYEGGFGGEPGNEAHGGYTFSAVAALELLGRWDVVD 738
            D+G+ + TS  Q  +EE+ ++ +A        + D  L+R  H  YL RGL   S S + LDASRPWL YW +H L+LL     P     +   L    Q P GGF GG GQ  H APTY+AV AL++L  ++ ++ LDR+GL +F  + K+  G F MHV GE+D+R  Y  V V+ +T ++    L +G  E++  CQTYEGGF GEPG EAHGGYTF   AAL LLG+  ++D
Sbjct:   16 DDGLRTVTSEEQQRVEEVVSKNYASYLRVADLNPDFPLYRQKHLHYLRRGLRHLSDSYECLDASRPWLCYWILHSLELLDEHVPPQVTSNIVDFLRR-CQDPEGGFGGGPGQVPHLAPTYAAVCALSILGSKEALDILDRKGLQNFLSQCKSIDGSFRMHVDGEVDIRGVYCAVVVASITNIMTPS-LFEGTDEWLTKCQTYEGGFCGEPGLEAHGGYTFCGYAALILLGKEHLID 249          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig72997.17331.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8J5QS52_9HYME7.290e-5843.50Uncharacterized protein n=1 Tax=Cotesia typhae Tax... [more]
A0A8J6CD53_DIALT9.540e-5847.06Protein farnesyltransferase subunit beta n=1 Tax=D... [more]
UPI00142552045.730e-5744.96protein farnesyltransferase subunit beta-like n=1 ... [more]
UPI0019393F963.960e-5643.98protein farnesyltransferase subunit beta-like n=1 ... [more]
F0Y5G6_AURAN4.030e-5652.94Protein farnesyltransferase subunit beta n=1 Tax=A... [more]
A0A7S2TFR8_9EUKA6.930e-5643.10Protein farnesyltransferase subunit beta n=1 Tax=L... [more]
A0A197K9B1_9FUNG9.370e-5642.25Protein farnesyltransferase subunit beta n=1 Tax=L... [more]
UPI001BB1FD652.940e-5544.81protein farnesyltransferase subunit beta-like n=1 ... [more]
A0A836CMB6_9STRA3.170e-5543.97Protein farnesyltransferase subunit beta n=1 Tax=T... [more]
A0A6P8IMP0_ACTTE6.310e-5544.07Protein farnesyltransferase subunit beta n=1 Tax=A... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig72997contigM-pyrifera_M_contig72997:361..1110 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeArthropoda
Seed ortholog score193.4
Seed ortholog evalue1.3e-46
Seed eggNOG ortholog69319.XP_008560646.1
KEGG rclassRC00069,RC03004
KEGG koko:K05954
KEGG ReactionR09844
KEGG Pathwayko00900,ko01130,map00900,map01130
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005965,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0018342,GO:0018343,GO:0019538,GO:0032991,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0097354,GO:1901564,GO:1902494,GO:1990234
EggNOG free text desc.Prenyltransferase and squalene oxidase repeat
EggNOG OGs38CYN@33154,3B9DH@33208,3CVQA@33213,3SI09@50557,41VIR@6656,46JNB@7399,COG5029@1,KOG0365@2759
Ec32 ortholog descriptionProtein farnesyltransferase subunit beta
Ec32 orthologEc-28_001820.1
EC2.5.1.58
COG Functional cat.O
Best tax levelHymenoptera
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01006
Exons1
Model size750
Cds size741
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816627.167688-UTR-M-pyrifera_M_contig72997:360..3691622816627.167688-UTR-M-pyrifera_M_contig72997:360..369Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig72997 361..369 +
1692278085.5370882-UTR-M-pyrifera_M_contig72997:360..3691692278085.5370882-UTR-M-pyrifera_M_contig72997:360..369Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig72997 361..369 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816627.1847537-CDS-M-pyrifera_M_contig72997:369..11101622816627.1847537-CDS-M-pyrifera_M_contig72997:369..1110Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig72997 370..1110 +
1692278085.552352-CDS-M-pyrifera_M_contig72997:369..11101692278085.552352-CDS-M-pyrifera_M_contig72997:369..1110Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig72997 370..1110 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig72997.17331.1prot_M-pyrifera_M_contig72997.17331.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig72997 370..1110 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig72997.17331.1

>prot_M-pyrifera_M_contig72997.17331.1 ID=prot_M-pyrifera_M_contig72997.17331.1|Name=mRNA_M-pyrifera_M_contig72997.17331.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=247bp
MEMPEYVELMMMDDEGVSSTTSVSQMELEELCARYWAFPSSDVALHRDNH
ERYLSRGLFRRSRSLQGLDASRPWLVYWRVHGLDLLGRRPGPVEREKLRR
VLLEDLQSPTGGFCGGVGQEAHAAPTYSAVLALAVLSEEDGVEGLDREGL
VSFFRRLKAKSGGFAMHVGGEMDVRATYTVVAVSWLTGVLGEEGLMDGVA
EYIGACQTYEGGFGGEPGNEAHGGYTFSAVAALELLGRWDVVDVDAV
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mRNA from alignment at M-pyrifera_M_contig72997:361..1110+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig72997.17331.1 ID=mRNA_M-pyrifera_M_contig72997.17331.1|Name=mRNA_M-pyrifera_M_contig72997.17331.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=750bp|location=Sequence derived from alignment at M-pyrifera_M_contig72997:361..1110+ (Macrocystis pyrifera P11B4 male)
CTGGGTGCAATGGAGATGCCAGAATACGTAGAATTGATGATGATGGATGA TGAGGGCGTTAGTAGTACGACTTCTGTGTCTCAGATGGAATTAGAAGAGT TGTGTGCTCGGTATTGGGCGTTTCCAAGCAGTGATGTGGCTCTACATCGC GACAATCACGAGAGGTACCTCAGCCGTGGGTTGTTTCGACGCAGTCGATC ACTCCAAGGGTTGGATGCGTCCAGGCCATGGTTAGTATACTGGCGTGTAC ATGGATTGGATCTGCTTGGCCGCCGACCAGGCCCTGTGGAGCGCGAAAAG CTTCGTCGAGTTTTGTTGGAGGACCTGCAGAGTCCTACTGGAGGGTTTTG CGGCGGTGTGGGACAAGAAGCCCATGCAGCACCTACGTATTCAGCAGTGT TGGCTCTTGCTGTACTGAGTGAGGAGGATGGGGTGGAGGGATTGGACCGT GAAGGTTTGGTGTCGTTTTTCCGGCGGCTCAAGGCGAAAAGTGGTGGTTT TGCGATGCATGTGGGAGGAGAGATGGATGTTCGGGCAACCTACACGGTGG TGGCAGTGAGTTGGTTGACAGGGGTGTTGGGAGAGGAAGGTTTGATGGAT GGCGTTGCAGAGTACATTGGTGCATGCCAAACCTATGAAGGTGGGTTTGG AGGAGAGCCAGGGAACGAAGCACATGGAGGCTATACGTTTTCTGCTGTCG CTGCGCTGGAATTGTTGGGTCGATGGGACGTTGTAGACGTGGATGCAGTT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig72997:361..1110+

>mRNA_M-pyrifera_M_contig72997.17331.1 ID=mRNA_M-pyrifera_M_contig72997.17331.1|Name=mRNA_M-pyrifera_M_contig72997.17331.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1482bp|location=Sequence derived from alignment at M-pyrifera_M_contig72997:361..1110+ (Macrocystis pyrifera P11B4 male)
ATGGAGATGCCAGAATACGTAGAATTGATGATGATGGATGATGAGGGCGT
TAGTAGTACGACTTCTGTGTCTCAGATGGAATTAGAAGAGTTGTGTGCTC
GGTATTGGGCGTTTCCAAGCAGTGATGTGGCTCTACATCGCGACAATCAC
GAGAGGTACCTCAGCCGTGGGTTGTTTCGACGCAGTCGATCACTCCAAGG
GTTGGATGCGTCCAGGCCATGGTTAGTATACTGGCGTGTACATGGATTGG
ATCTGCTTGGCCGCCGACCAGGCCCTGTGGAGCGCGAAAAGCTTCGTCGA
GTTTTGTTGGAGGACCTGCAGAGTCCTACTGGAGGGTTTTGCGGCGGTGT
GGGACAAGAAGCCCATGCAGCACCTACGTATTCAGCAGTGTTGGCTCTTG
CTGTACTGAGTGAGGAGGATGGGGTGGAGGGATTGGACCGTGAAGGTTTG
GTGTCGTTTTTCCGGCGGCTCAAGGCGAAAAGTGGTGGTTTTGCGATGCA
TGTGGGAGGAGAGATGGATGTTCGGGCAACCTACACGGTGGTGGCAGTGA
GTTGGTTGACAGGGGTGTTGGGAGAGGAAGGTTTGATGGATGGCGTTGCA
GAGTACATTGGTGCATGCCAAACCTATGAAGGTGGGTTTGGAGGAGAGCC
AGGGAACGAAGCACATGGAGGCTATACGTTTTCTGCTGTCGCTGCGCTGG
AATTGTTGGGTCGATGGGACGTTGTAGACGTGGATGCAGTTATGGAGATG
CCAGAATACGTAGAATTGATGATGATGGATGATGAGGGCGTTAGTAGTAC
GACTTCTGTGTCTCAGATGGAATTAGAAGAGTTGTGTGCTCGGTATTGGG
CGTTTCCAAGCAGTGATGTGGCTCTACATCGCGACAATCACGAGAGGTAC
CTCAGCCGTGGGTTGTTTCGACGCAGTCGATCACTCCAAGGGTTGGATGC
GTCCAGGCCATGGTTAGTATACTGGCGTGTACATGGATTGGATCTGCTTG
GCCGCCGACCAGGCCCTGTGGAGCGCGAAAAGCTTCGTCGAGTTTTGTTG
GAGGACCTGCAGAGTCCTACTGGAGGGTTTTGCGGCGGTGTGGGACAAGA
AGCCCATGCAGCACCTACGTATTCAGCAGTGTTGGCTCTTGCTGTACTGA
GTGAGGAGGATGGGGTGGAGGGATTGGACCGTGAAGGTTTGGTGTCGTTT
TTCCGGCGGCTCAAGGCGAAAAGTGGTGGTTTTGCGATGCATGTGGGAGG
AGAGATGGATGTTCGGGCAACCTACACGGTGGTGGCAGTGAGTTGGTTGA
CAGGGGTGTTGGGAGAGGAAGGTTTGATGGATGGCGTTGCAGAGTACATT
GGTGCATGCCAAACCTATGAAGGTGGGTTTGGAGGAGAGCCAGGGAACGA
AGCACATGGAGGCTATACGTTTTCTGCTGTCGCTGCGCTGGAATTGTTGG
GTCGATGGGACGTTGTAGACGTGGATGCAGTT
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