mRNA_M-pyrifera_M_contig72968.17326.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig72968.17326.1
Unique NamemRNA_M-pyrifera_M_contig72968.17326.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig72968.17326.1 vs. uniprot
Match: A0A5A8CNW7_CAFRO (MFS domain-containing protein n=4 Tax=Sar TaxID=2698737 RepID=A0A5A8CNW7_CAFRO)

HSP 1 Score: 102 bits (253), Expect = 1.650e-23
Identity = 47/86 (54.65%), Postives = 63/86 (73.26%), Query Frame = 1 
Query:    1 FGYIWLQIPGGMLATQFGGKVVFGLAVAFPSLVTLLTPFAAQSFPALCVMRVLTGLGEGASYPALHALLGKWAPQSERSRMVGFIF 258
            FGYI LQ+ GG L+ ++G K+V  L V  P+++T LTP  A SFP L  +RVLTG+GE  SYPALH+L+G W+P  ERS+ VGF++
Sbjct:   69 FGYITLQLGGGYLSVRYGPKLVLALGVLVPAVLTALTPVVAGSFPLLIAVRVLTGVGEAVSYPALHSLMGAWSPLEERSQTVGFVW 154
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BLAST of mRNA_M-pyrifera_M_contig72968.17326.1 vs. uniprot
Match: A0A5A8E3W1_CAFRO (MFS domain-containing protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E3W1_CAFRO)

HSP 1 Score: 102 bits (253), Expect = 2.630e-23
Identity = 47/86 (54.65%), Postives = 63/86 (73.26%), Query Frame = 1 
Query:    1 FGYIWLQIPGGMLATQFGGKVVFGLAVAFPSLVTLLTPFAAQSFPALCVMRVLTGLGEGASYPALHALLGKWAPQSERSRMVGFIF 258
            FGYI LQ+ GG L+ ++G K+V  L V  P+++T LTP  A SFP L  +RVLTG+GE  SYPALH+L+G W+P  ERS+ VGF++
Sbjct:   69 FGYITLQLGGGYLSVRYGPKLVLALGVLVPAVLTALTPVVAGSFPLLIAVRVLTGVGEAVSYPALHSLMGAWSPLEERSQTVGFVW 154
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BLAST of mRNA_M-pyrifera_M_contig72968.17326.1 vs. uniprot
Match: UPI000C20AB8A (putative inorganic phosphate cotransporter n=1 Tax=Onthophagus taurus TaxID=166361 RepID=UPI000C20AB8A)

HSP 1 Score: 99.0 bits (245), Expect = 2.490e-22
Identity = 44/87 (50.57%), Postives = 63/87 (72.41%), Query Frame = 1 
Query:    1 FGYIWLQIPGGMLATQFGGKVVFGLAVAFPSLVTLLTPFAAQ-SFPALCVMRVLTGLGEGASYPALHALLGKWAPQSERSRMVGFIF 258
            +GY+  QIPGG LA  FGGK+VFG+ V   +L TLLTP AA+ +FP   ++RVL G+GEG ++P++HA+L +W P  ERSR   +++
Sbjct:  128 YGYVITQIPGGRLAELFGGKLVFGIGVLMTALFTLLTPIAARINFPLFIIVRVLEGMGEGVTFPSMHAMLARWIPPLERSRFAAYVY 214
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BLAST of mRNA_M-pyrifera_M_contig72968.17326.1 vs. uniprot
Match: F2TZ14_SALR5 (MFS domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2TZ14_SALR5)

HSP 1 Score: 99.0 bits (245), Expect = 2.720e-22
Identity = 43/86 (50.00%), Postives = 62/86 (72.09%), Query Frame = 1 
Query:    1 FGYIWLQIPGGMLATQFGGKVVFGLAVAFPSLVTLLTPFAAQSFPALCVMRVLTGLGEGASYPALHALLGKWAPQSERSRMVGFIF 258
            +GYI  Q+PGG LAT+FGGK+VF   V   +++TLLTP A++  P L  +R++ GLGEG +YPA+HA+  KWAP +ERS++    +
Sbjct:   72 YGYIVTQLPGGWLATRFGGKLVFAYGVLCTTVLTLLTPLASERLPVLVALRIVEGLGEGVTYPAMHAMWAKWAPPAERSQLATIAY 157
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BLAST of mRNA_M-pyrifera_M_contig72968.17326.1 vs. uniprot
Match: A0A8K0CCL2_9COLE (Uncharacterized protein n=1 Tax=Ignelater luminosus TaxID=2038154 RepID=A0A8K0CCL2_9COLE)

HSP 1 Score: 97.4 bits (241), Expect = 8.900e-22
Identity = 43/87 (49.43%), Postives = 62/87 (71.26%), Query Frame = 1 
Query:    1 FGYIWLQIPGGMLATQFGGKVVFGLAVAFPSLVTLLTPFAAQ-SFPALCVMRVLTGLGEGASYPALHALLGKWAPQSERSRMVGFIF 258
            +GY+  Q+PGG LA  FGGK+VFG  V   ++ TLL+P AAQ +FP   V+RVL G+GEG ++PA+HA+L +W P  ERS+   +++
Sbjct:  128 YGYVLTQVPGGRLAELFGGKLVFGCGVLMTAIFTLLSPIAAQMNFPLFIVVRVLEGMGEGVTFPAMHAMLARWIPPLERSKFAAYVY 214
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BLAST of mRNA_M-pyrifera_M_contig72968.17326.1 vs. uniprot
Match: T1IXH3_STRMM (MFS domain-containing protein n=1 Tax=Strigamia maritima TaxID=126957 RepID=T1IXH3_STRMM)

HSP 1 Score: 96.7 bits (239), Expect = 1.350e-21
Identity = 48/87 (55.17%), Postives = 62/87 (71.26%), Query Frame = 1 
Query:    1 FGYIWLQIPGGMLATQFGGKVVFGLAVAFPSLVTLLTPFAAQ-SFPALCVMRVLTGLGEGASYPALHALLGKWAPQSERSRMVGFIF 258
            +GYI  QIPGG +AT FGGK++FG+ V   +L+TLLTPFAA+ S  AL  +RVL GL EG +YPA+HAL   WAP  E++R+    F
Sbjct:  103 YGYIVTQIPGGWMATYFGGKIIFGIGVMLTALLTLLTPFAARLSVYALIAVRVLEGLTEGLAYPAIHALWTHWAPPMEKTRLATIAF 189
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BLAST of mRNA_M-pyrifera_M_contig72968.17326.1 vs. uniprot
Match: A0A7I8VU41_9ANNE (DgyrCDS8396 n=1 Tax=Dimorphilus gyrociliatus TaxID=2664684 RepID=A0A7I8VU41_9ANNE)

HSP 1 Score: 96.7 bits (239), Expect = 1.630e-21
Identity = 46/87 (52.87%), Postives = 65/87 (74.71%), Query Frame = 1 
Query:    1 FGYIWLQIPGGMLATQFGGKVVFGLAVAFPSLVTLLTPFAAQSFPALCV-MRVLTGLGEGASYPALHALLGKWAPQSERSRMVGFIF 258
            +GYI  QIPGG +A +FG K+V+GL V   S++TL+TP AA++   L V +R+L G+GEG ++PA+HALL KWAP  ERS++  FI+
Sbjct:  106 YGYIVTQIPGGWMAEKFGAKLVYGLGVLCTSILTLITPLAARTSVGLFVAVRILEGIGEGVTFPAMHALLSKWAPPMERSQLGSFIY 192
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BLAST of mRNA_M-pyrifera_M_contig72968.17326.1 vs. uniprot
Match: H2ZGY4_CIOSA (MFS domain-containing protein n=1 Tax=Ciona savignyi TaxID=51511 RepID=H2ZGY4_CIOSA)

HSP 1 Score: 95.9 bits (237), Expect = 1.670e-21
Identity = 47/87 (54.02%), Postives = 64/87 (73.56%), Query Frame = 1 
Query:    1 FGYIWLQIPGGMLATQFGGKVVFGLAVAFPSLVTLLTPFAAQ-SFPALCVMRVLTGLGEGASYPALHALLGKWAPQSERSRMVGFIF 258
            +GYI  Q+PGG LA++FGGK +FG  V   S++TLLTP AA+ SF  L V+RVL G+GEG ++PA+HA+ G WAP  +RSR+V   +
Sbjct:   18 YGYILTQLPGGYLASRFGGKWLFGGGVLCTSVLTLLTPVAARTSFALLIVVRVLEGIGEGVTFPAMHAMWGSWAPPVDRSRLVSVTY 104
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BLAST of mRNA_M-pyrifera_M_contig72968.17326.1 vs. uniprot
Match: UPI0014558079 (sialin-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI0014558079)

HSP 1 Score: 96.7 bits (239), Expect = 1.680e-21
Identity = 44/87 (50.57%), Postives = 65/87 (74.71%), Query Frame = 1 
Query:    1 FGYIWLQIPGGMLATQFGGKVVFGLAVAFPSLVTLLTPFAAQS-FPALCVMRVLTGLGEGASYPALHALLGKWAPQSERSRMVGFIF 258
            +GY++ QIPGG+LA ++G K++FGL V   +++TL TPFAA++ +  L  +RVL G+GEG +YPA+H+L G WAP  ERSR+V   +
Sbjct:  113 YGYVFTQIPGGLLADRYGAKLIFGLGVLCTAVLTLATPFAARAGYQYLIALRVLEGVGEGVTYPAMHSLWGHWAPPLERSRLVTITY 199
[Close]
BLAST of mRNA_M-pyrifera_M_contig72968.17326.1 vs. uniprot
Match: A0A6B2EGQ2_9DIPT (Putative permease of the major facilitator superfamily protein (Fragment) n=1 Tax=Phlebotomus kandelakii TaxID=1109342 RepID=A0A6B2EGQ2_9DIPT)

HSP 1 Score: 95.9 bits (237), Expect = 2.980e-21
Identity = 43/87 (49.43%), Postives = 60/87 (68.97%), Query Frame = 1 
Query:    1 FGYIWLQIPGGMLATQFGGKVVFGLAVAFPSLVTLLTPFAAQ-SFPALCVMRVLTGLGEGASYPALHALLGKWAPQSERSRMVGFIF 258
            +GY+  QIPGG LA   GGK+++G+ V   +L T LTP AA  S PAL ++RV+ G+GEG +YPA+HA+L KW P  ERS+    ++
Sbjct:  105 YGYVLTQIPGGRLAETLGGKMIYGVGVLITALFTFLTPIAAYWSLPALVIVRVIEGMGEGVTYPAMHAMLAKWIPPLERSKFAAVVY 191
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig72968.17326.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8CNW7_CAFRO1.650e-2354.65MFS domain-containing protein n=4 Tax=Sar TaxID=26... [more]
A0A5A8E3W1_CAFRO2.630e-2354.65MFS domain-containing protein n=3 Tax=Cafeteria ro... [more]
UPI000C20AB8A2.490e-2250.57putative inorganic phosphate cotransporter n=1 Tax... [more]
F2TZ14_SALR52.720e-2250.00MFS domain-containing protein n=1 Tax=Salpingoeca ... [more]
A0A8K0CCL2_9COLE8.900e-2249.43Uncharacterized protein n=1 Tax=Ignelater luminosu... [more]
T1IXH3_STRMM1.350e-2155.17MFS domain-containing protein n=1 Tax=Strigamia ma... [more]
A0A7I8VU41_9ANNE1.630e-2152.87DgyrCDS8396 n=1 Tax=Dimorphilus gyrociliatus TaxID... [more]
H2ZGY4_CIOSA1.670e-2154.02MFS domain-containing protein n=1 Tax=Ciona savign... [more]
UPI00145580791.680e-2150.57sialin-like n=1 Tax=Asterias rubens TaxID=7604 Rep... [more]
A0A6B2EGQ2_9DIPT2.980e-2149.43Putative permease of the major facilitator superfa... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig72968contigM-pyrifera_M_contig72968:594..857 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeOpisthokonta
Seed ortholog score99.4
Seed ortholog evalue9.1e-19
Seed eggNOG ortholog946362.XP_004997794.1
Preferred nameSLC17A5
KEGG koko:K08193,ko:K12300,ko:K12301
KEGG TC2.A.1.14,2.A.1.14.10
KEGG Pathwayko04142,map04142
Hectar predicted targeting categorysignal peptide
GOsGO:0000323,GO:0003674,GO:0005215,GO:0005342,GO:0005351,GO:0005402,GO:0005436,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005765,GO:0005773,GO:0005774,GO:0005829,GO:0005886,GO:0005887,GO:0006793,GO:0006796,GO:0006810,GO:0006811,GO:0006812,GO:0006814,GO:0006820,GO:0008150,GO:0008152,GO:0008324,GO:0008509,GO:0008514,GO:0008643,GO:0009605,GO:0009607,GO:0009617,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015081,GO:0015136,GO:0015144,GO:0015291,GO:0015293,GO:0015294,GO:0015295,GO:0015318,GO:0015370,GO:0015538,GO:0015672,GO:0015711,GO:0015739,GO:0015849,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0022890,GO:0030001,GO:0031090,GO:0031224,GO:0031226,GO:0031410,GO:0031982,GO:0034219,GO:0034220,GO:0035725,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044422,GO:0044424,GO:0044425,GO:0044437,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0046873,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0051704,GO:0051707,GO:0055085,GO:0071702,GO:0071944,GO:0097708,GO:0098588,GO:0098655,GO:0098656,GO:0098660,GO:0098662,GO:0098805,GO:0098852,GO:1901264,GO:1901505,GO:1902600,GO:1903825,GO:1905039
EggNOG free text desc.transmembrane transport
EggNOG OGs38CXA@33154,KOG2532@1,KOG2532@2759
COG Functional cat.G
Best tax levelOpisthokonta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000
Exons1
Model size264
Cds size264
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816626.8541088-CDS-M-pyrifera_M_contig72968:593..8571622816626.8541088-CDS-M-pyrifera_M_contig72968:593..857Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig72968 594..857 -
1692278085.2945395-CDS-M-pyrifera_M_contig72968:593..8571692278085.2945395-CDS-M-pyrifera_M_contig72968:593..857Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig72968 594..857 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig72968.17326.1prot_M-pyrifera_M_contig72968.17326.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig72968 594..857 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig72968.17326.1

>prot_M-pyrifera_M_contig72968.17326.1 ID=prot_M-pyrifera_M_contig72968.17326.1|Name=mRNA_M-pyrifera_M_contig72968.17326.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=88bp
FGYIWLQIPGGMLATQFGGKVVFGLAVAFPSLVTLLTPFAAQSFPALCVM
RVLTGLGEGASYPALHALLGKWAPQSERSRMVGFIFR*
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mRNA from alignment at M-pyrifera_M_contig72968:594..857-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig72968.17326.1 ID=mRNA_M-pyrifera_M_contig72968.17326.1|Name=mRNA_M-pyrifera_M_contig72968.17326.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=264bp|location=Sequence derived from alignment at M-pyrifera_M_contig72968:594..857- (Macrocystis pyrifera P11B4 male)
TTCGGGTATATTTGGCTGCAAATCCCGGGTGGTATGCTGGCGACGCAGTT
CGGAGGCAAGGTGGTGTTCGGGCTGGCGGTGGCGTTTCCGTCGTTGGTGA
CGCTGCTGACCCCGTTCGCGGCGCAGTCCTTCCCGGCGCTGTGCGTCATG
CGAGTCCTCACGGGCCTCGGAGAAGGAGCCTCCTACCCCGCCCTCCACGC
CCTCCTCGGCAAGTGGGCGCCGCAATCGGAGCGATCCAGAATGGTGGGGT
TCATCTTCAGGTAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig72968:594..857-

>mRNA_M-pyrifera_M_contig72968.17326.1 ID=mRNA_M-pyrifera_M_contig72968.17326.1|Name=mRNA_M-pyrifera_M_contig72968.17326.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=528bp|location=Sequence derived from alignment at M-pyrifera_M_contig72968:594..857- (Macrocystis pyrifera P11B4 male)
TTCGGGTATATTTGGCTGCAAATCCCGGGTGGTATGCTGGCGACGCAGTT
CGGAGGCAAGGTGGTGTTCGGGCTGGCGGTGGCGTTTCCGTCGTTGGTGA
CGCTGCTGACCCCGTTCGCGGCGCAGTCCTTCCCGGCGCTGTGCGTCATG
CGAGTCCTCACGGGCCTCGGAGAAGGAGCCTCCTACCCCGCCCTCCACGC
CCTCCTCGGCAAGTGGGCGCCGCAATCGGAGCGATCCAGAATGGTGGGGT
TCATCTTCAGGTAATTCGGGTATATTTGGCTGCAAATCCCGGGTGGTATG
CTGGCGACGCAGTTCGGAGGCAAGGTGGTGTTCGGGCTGGCGGTGGCGTT
TCCGTCGTTGGTGACGCTGCTGACCCCGTTCGCGGCGCAGTCCTTCCCGG
CGCTGTGCGTCATGCGAGTCCTCACGGGCCTCGGAGAAGGAGCCTCCTAC
CCCGCCCTCCACGCCCTCCTCGGCAAGTGGGCGCCGCAATCGGAGCGATC
CAGAATGGTGGGGTTCATCTTCAGGTAA
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