mRNA_M-pyrifera_M_contig72881.17309.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig72881.17309.1 vs. uniprot
Match: A0A812Q0I0_9DINO (RpmB protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812Q0I0_9DINO) HSP 1 Score: 81.3 bits (199), Expect = 2.530e-16 Identity = 48/93 (51.61%), Postives = 63/93 (67.74%), Query Frame = 1 Query: 19 RTRRAWRPNAQTATLWSDILERRVRIRVSTTALRRIHAAGGLDRYILDTPKAHLQSEFALALRTELQRL-LETRKAAGAPATWIESVPSFAAA 294 +TRR+W+PNAQ +LWSDIL +V +R STTALR + AGGLD YIL TP+ LQS++A+ L+ L + E R+ A A A + PS AAA Sbjct: 34 KTRRSWKPNAQGVSLWSDILGEKVPLRASTTALRWVDKAGGLDNYILYTPERKLQSKYAVQLKQRLVAVRAEKRRVAAAGAA---TSPSQAAA 123
BLAST of mRNA_M-pyrifera_M_contig72881.17309.1 vs. uniprot
Match: A0A5A8D735_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D735_CAFRO) HSP 1 Score: 74.7 bits (182), Expect = 1.380e-14 Identity = 37/83 (44.58%), Postives = 52/83 (62.65%), Query Frame = 1 Query: 22 TRRAWRPNAQTATLWSDILERRVRIRVSTTALRRIHAAGGLDRYILDTPKAHLQSEFALALRTELQRLLETRKAAGAPATWIE 270 TRR W+PN Q LWSD LE R+R++V+T AL+ I GGLD Y++ T + L + A LR + ++ R+ AG P TW+E Sbjct: 17 TRRVWKPNVQWVRLWSDALETRLRLKVTTKALKVIDKRGGLDNYLIHTRPSLLGAGKAQELRRLVSDVMTAREMAGEPTTWLE 99
BLAST of mRNA_M-pyrifera_M_contig72881.17309.1 vs. uniprot
Match: A0A5A8DFF2_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DFF2_CAFRO) HSP 1 Score: 74.7 bits (182), Expect = 2.510e-14 Identity = 37/83 (44.58%), Postives = 52/83 (62.65%), Query Frame = 1 Query: 22 TRRAWRPNAQTATLWSDILERRVRIRVSTTALRRIHAAGGLDRYILDTPKAHLQSEFALALRTELQRLLETRKAAGAPATWIE 270 TRR W+PN Q LWSD LE R+R++V+T AL+ I GGLD Y++ T + L + A LR + ++ R+ AG P TW+E Sbjct: 47 TRRVWKPNVQWVRLWSDALETRLRLKVTTKALKVIDKRGGLDNYLIHTRPSLLGAGKAQELRRLVSDVMTAREMAGEPTTWLE 129
BLAST of mRNA_M-pyrifera_M_contig72881.17309.1 vs. uniprot
Match: A0A2P6TLE9_CHLSO (54S ribosomal mitochondrial n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TLE9_CHLSO) HSP 1 Score: 72.8 bits (177), Expect = 4.030e-14 Identity = 42/97 (43.30%), Postives = 60/97 (61.86%), Query Frame = 1 Query: 19 RTRRAWRPNAQTATLWSDILERRVRIRVSTTALRRIHAAGGLDRYILDTPKAHLQSEFALALRTELQRLLETRKAAGAPATWIESVPSFAAADTIEA 309 ++RR W+PNA L+S +L++ VR+RV+T ALR I AGG+D YIL+TP LQS+ A+ LR R+L AP ++++ AAA EA Sbjct: 40 KSRRNWKPNAHNKRLYSALLDKMVRLRVTTAALRDIDKAGGIDAYILNTPDKKLQSDVAMDLRA---RMLSAMARQTAPPRGLQTLLPRAAAAAAEA 133
BLAST of mRNA_M-pyrifera_M_contig72881.17309.1 vs. uniprot
Match: A0A0H5R4X5_9EUKA (Uncharacterized protein (Fragment) n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5R4X5_9EUKA) HSP 1 Score: 71.6 bits (174), Expect = 1.560e-13 Identity = 40/88 (45.45%), Postives = 52/88 (59.09%), Query Frame = 1 Query: 19 RTRRAWRPNAQTATLWSDILERRVRIRVSTTALRRIHAAGGLDRYILDTPKAHLQSEFALALRTELQRLLETRKAAGAPATWIESVPS 282 RTRR W PN QT +WSDI+ R +R R++T LR I AGG D YIL+T + L S A+++R LLE A AP + E P+ Sbjct: 64 RTRRCWNPNVQTKRIWSDIMGRSLRFRMTTYVLRCIDKAGGFDEYILNTDEKKLASPLAMSIR---HSLLEKLVADAAPVSEPEDKPA 148
BLAST of mRNA_M-pyrifera_M_contig72881.17309.1 vs. uniprot
Match: A0A8B8P6E9_9MYRT (54S ribosomal protein L24, mitochondrial isoform X1 n=3 Tax=Rhodamnia argentea TaxID=178133 RepID=A0A8B8P6E9_9MYRT) HSP 1 Score: 71.2 bits (173), Expect = 8.670e-13 Identity = 33/73 (45.21%), Postives = 51/73 (69.86%), Query Frame = 1 Query: 13 FCRTRRAWRPNAQTATLWSDILERRVRIRVSTTALRRIHAAGGLDRYILDTPKAHLQSEFALALRTELQRLLE 231 F RTRR+W+PN Q L+S IL+R +R++V+T ALR I AGG+D Y+L TP + +E L ++++++L E Sbjct: 67 FSRTRRSWKPNVQEKRLFSYILDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGLYWKSKIEKLYE 139
BLAST of mRNA_M-pyrifera_M_contig72881.17309.1 vs. uniprot
Match: A0A1Y1Z115_9FUNG (Uncharacterized protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Z115_9FUNG) HSP 1 Score: 69.3 bits (168), Expect = 1.080e-12 Identity = 34/82 (41.46%), Postives = 52/82 (63.41%), Query Frame = 1 Query: 19 RTRRAWRPNAQTATLWSDILERRVRIRVSTTALRRIHAAGGLDRYILDTPKAHLQSEFALALRTELQRLLETRKAAGAPATW 264 +TRR W PN Q L+S + ++ +I+V+ +ALR I GGLDRY+L T L SEF +A++ +L+ LL+ + P+TW Sbjct: 40 KTRRRWLPNVQEKQLYSQLHDKMFKIKVTASALRTIDKKGGLDRYLLSTRDDKLYSEFGIAMKRDLEILLQRKGWTKNPSTW 121
BLAST of mRNA_M-pyrifera_M_contig72881.17309.1 vs. uniprot
Match: A0A803R9E6_CANSA (Uncharacterized protein n=1 Tax=Cannabis sativa TaxID=3483 RepID=A0A803R9E6_CANSA) HSP 1 Score: 68.9 bits (167), Expect = 2.000e-12 Identity = 32/69 (46.38%), Postives = 48/69 (69.57%), Query Frame = 1 Query: 19 RTRRAWRPNAQTATLWSDILERRVRIRVSTTALRRIHAAGGLDRYILDTPKAHLQSEFALALRTELQRL 225 RTRR W+PN Q L+S IL+R +R++V+T ALR I AGG+D Y+L TP + +E L +T++++L Sbjct: 11 RTRRTWKPNVQDKRLFSYILDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYCKMDTETGLFWKTKIEKL 79
BLAST of mRNA_M-pyrifera_M_contig72881.17309.1 vs. uniprot
Match: A0A8J9WMZ3_9CHLO (Probable 50S ribosomal protein L28 at N-terminal half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WMZ3_9CHLO) HSP 1 Score: 69.3 bits (168), Expect = 2.860e-12 Identity = 42/102 (41.18%), Postives = 60/102 (58.82%), Query Frame = 1 Query: 19 RTRRAWRPNAQTATLWSDILERRVRIRVSTTALRRIHAAGGLDRYILDTPKAHLQSEFALALRTELQRLLETRKAAGAPATWIESVPSFAAADTI-EASERS 321 RTRR WRPN Q+ ++S+ L+R VR+ V+T A+R I GGLD Y+L+TP L S+ L+ +++ L +K G S PS A++ T EA RS Sbjct: 36 RTRRIWRPNVQSKAIYSEALDRMVRLNVTTAAMRTIDKYGGLDAYLLETPDEKLASDVGSKLKEQIRAALVKQKQQGQT-----SGPSQASSSTATEAPSRS 132
BLAST of mRNA_M-pyrifera_M_contig72881.17309.1 vs. uniprot
Match: UPI000D62EA8D (uncharacterized protein LOC102626908 isoform X2 n=1 Tax=Citrus sinensis TaxID=2711 RepID=UPI000D62EA8D) HSP 1 Score: 68.9 bits (167), Expect = 3.490e-12 Identity = 32/71 (45.07%), Postives = 49/71 (69.01%), Query Frame = 1 Query: 19 RTRRAWRPNAQTATLWSDILERRVRIRVSTTALRRIHAAGGLDRYILDTPKAHLQSEFALALRTELQRLLE 231 RTRR W+PN Q L+S I++R +R++V+T ALR I AGG+D Y+L TP + +E L +T++++L E Sbjct: 33 RTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGLYWKTKIEKLYE 103 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig72881.17309.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig72881.17309.1 >prot_M-pyrifera_M_contig72881.17309.1 ID=prot_M-pyrifera_M_contig72881.17309.1|Name=mRNA_M-pyrifera_M_contig72881.17309.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=108bp MFLVFCRTRRAWRPNAQTATLWSDILERRVRIRVSTTALRRIHAAGGLDRback to top mRNA from alignment at M-pyrifera_M_contig72881:746..1069- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig72881.17309.1 ID=mRNA_M-pyrifera_M_contig72881.17309.1|Name=mRNA_M-pyrifera_M_contig72881.17309.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=324bp|location=Sequence derived from alignment at M-pyrifera_M_contig72881:746..1069- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig72881:746..1069- >mRNA_M-pyrifera_M_contig72881.17309.1 ID=mRNA_M-pyrifera_M_contig72881.17309.1|Name=mRNA_M-pyrifera_M_contig72881.17309.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=648bp|location=Sequence derived from alignment at M-pyrifera_M_contig72881:746..1069- (Macrocystis pyrifera P11B4 male)back to top |