mRNA_M-pyrifera_M_contig72876.17306.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig72876.17306.1 vs. uniprot
Match: A0A5Q2RLC3_9ACTN (Cell wall synthesis protein Wag31 n=1 Tax=Actinomarinicola tropica TaxID=2789776 RepID=A0A5Q2RLC3_9ACTN) HSP 1 Score: 72.4 bits (176), Expect = 9.740e-12 Identity = 40/77 (51.95%), Postives = 58/77 (75.32%), Query Frame = 1 Query: 253 REETRLMLAEAQSVREKVLADLVKRRRTGRTQLDQIKAARDRMARSLAVVRRELDEAIDELAISVPEAKAAMEEVGR 483 R+E R M++EAQ VRE++L DL +RR++ R QL+Q++AAR+R+ + AVVRR +DEA EL ++VP A+ A E GR Sbjct: 209 RQEGREMVSEAQVVRERILTDLARRRKSARAQLEQLRAARERLLEAYAVVRRTVDEATTELDLAVPAARRAAEAAGR 285
BLAST of mRNA_M-pyrifera_M_contig72876.17306.1 vs. uniprot
Match: A0A538DQM4_9ACTN (Uncharacterized protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538DQM4_9ACTN) HSP 1 Score: 65.9 bits (159), Expect = 1.790e-9 Identity = 37/87 (42.53%), Postives = 60/87 (68.97%), Query Frame = 1 Query: 244 DRAREETRLMLAEAQSVREKVLADLVKRRRTGRTQLDQIKAARDRMARSLAVVRRELDEAIDELAISVPEAKAAMEEVGRSAQSGPD 504 D AR +R ++AEAQ VR+++L DL +RR+ R Q++Q++AARDR+ + VR LDEA EL I++P+A++A + R ++ P+ Sbjct: 176 DAARARSRELVAEAQMVRDRILRDLARRRKAMRVQVEQLRAARDRLLLAYEAVRTSLDEAEHELDIALPDARSAADATARRLEAEPE 262
BLAST of mRNA_M-pyrifera_M_contig72876.17306.1 vs. uniprot
Match: A0A7K1Z9Y4_9ACTN (Uncharacterized protein n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1Z9Y4_9ACTN) HSP 1 Score: 63.2 bits (152), Expect = 1.540e-8 Identity = 33/73 (45.21%), Postives = 51/73 (69.86%), Query Frame = 1 Query: 283 AQSVREKVLADLVKRRRTGRTQLDQIKAARDRMARSLAVVRRELDEAIDELAISVPEAKAAMEEVGRSAQSGP 501 AQ+VRE++L DL ++R+TGRTQ+++++A RDR+ +L V+ LD A+++L SVPEA+ A G S P Sbjct: 171 AQAVRERMLRDLARKRQTGRTQIERLRAGRDRLLEALTTVQTSLDTAVEDLVTSVPEARTAANRAGLRISSEP 243
BLAST of mRNA_M-pyrifera_M_contig72876.17306.1 vs. uniprot
Match: A0A538H516_9ACTN (Cell wall synthesis protein Wag31 n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538H516_9ACTN) HSP 1 Score: 62.0 bits (149), Expect = 3.860e-8 Identity = 37/74 (50.00%), Postives = 52/74 (70.27%), Query Frame = 1 Query: 238 ARDRAREETRLMLAEAQSVREKVLADLVKRRRTGRTQLDQIKAARDRMARSLAVVRRELDEAIDELAISVPEAK 459 AR R RE M+AEAQ+VRE++LADL +RRR G+ Q++Q+K RDR+ + VVRR LDE ++L + EA+ Sbjct: 171 ARGRGRE----MVAEAQTVRERILADLTRRRRVGQAQVEQLKVGRDRLLDAYRVVRRTLDEVTEQLTAAEAEAR 240
BLAST of mRNA_M-pyrifera_M_contig72876.17306.1 vs. uniprot
Match: A0A7K2E3F4_9ACTN (Uncharacterized protein n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2E3F4_9ACTN) HSP 1 Score: 60.1 bits (144), Expect = 1.750e-7 Identity = 34/87 (39.08%), Postives = 55/87 (63.22%), Query Frame = 1 Query: 244 DRAREETRLMLAEAQSVREKVLADLVKRRRTGRTQLDQIKAARDRMARSLAVVRRELDEAIDELAISVPEAKAAMEEVGRSAQSGPD 504 + RE R M+ EAQSVRE++L+DL ++R R +++Q++ RDR+ +L + R+ LD I+EL + P A AA E+ G + P+ Sbjct: 122 EEGRERGRSMVVEAQSVRERILSDLARKRHEHRVEVEQLRVTRDRLLEALGIFRQGLDGWIEELVQAEPRAAAAAEQAGLRVAAQPE 208
BLAST of mRNA_M-pyrifera_M_contig72876.17306.1 vs. uniprot
Match: A0A2W6AQ12_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Candidatus Dormibacter sp. RRmetagenome_bin12 TaxID=2599630 RepID=A0A2W6AQ12_9BACT) HSP 1 Score: 59.7 bits (143), Expect = 1.940e-7 Identity = 33/65 (50.77%), Postives = 47/65 (72.31%), Query Frame = 1 Query: 241 RDRAREETRLMLAEAQSVREKVLADLVKRRRTGRTQLDQIKAARDRMARSLAVVRRELDEAIDEL 435 R++A +E RL + AQSVREK+L+DL +RRR Q++Q++A R+R+ S VVRR L+E DEL Sbjct: 190 RNQAEQERRLTVEGAQSVREKILSDLSRRRRVATVQIEQLRAGRERLLESYGVVRRTLEEVADEL 254
BLAST of mRNA_M-pyrifera_M_contig72876.17306.1 vs. uniprot
Match: A0A7X5WNP2_9ACTN (Uncharacterized protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X5WNP2_9ACTN) HSP 1 Score: 59.3 bits (142), Expect = 3.120e-7 Identity = 31/65 (47.69%), Postives = 48/65 (73.85%), Query Frame = 1 Query: 286 QSVREKVLADLVKRRRTGRTQLDQIKAARDRMARSLAVVRRELDEAIDELAISVPEAKAAMEEVG 480 Q+VRE++L DL ++R+TGR Q++Q++A RDR+ SL + LD A+++L +VPEA+AA E G Sbjct: 65 QTVRERMLRDLARKRQTGRAQVEQLRAGRDRLLESLRTTQDLLDSAVEDLVNAVPEARAAAERAG 129
BLAST of mRNA_M-pyrifera_M_contig72876.17306.1 vs. uniprot
Match: A0A3C1CM97_9ACTN (Cell wall synthesis protein Wag31 n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C1CM97_9ACTN) HSP 1 Score: 59.3 bits (142), Expect = 3.330e-7 Identity = 34/78 (43.59%), Postives = 52/78 (66.67%), Query Frame = 1 Query: 271 MLAEAQSVREKVLADLVKRRRTGRTQLDQIKAARDRMARSLAVVRRELDEAIDELAISVPEAKAAMEEVGRSAQSGPD 504 M+ EAQ +R ++L+DL +RRR +Q++Q++A RDR+A ++ VR +DE DEL + EA+ A EE GR A + D Sbjct: 211 MVQEAQDMRARILSDLTRRRRVLHSQIEQLRAGRDRLAETITGVRHTVDEVTDELFRAEDEARLAAEEAGRHAAAPDD 288
BLAST of mRNA_M-pyrifera_M_contig72876.17306.1 vs. uniprot
Match: A0A6B0WNU1_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B0WNU1_9ACTN) HSP 1 Score: 57.4 bits (137), Expect = 1.490e-6 Identity = 32/78 (41.03%), Postives = 51/78 (65.38%), Query Frame = 1 Query: 271 MLAEAQSVREKVLADLVKRRRTGRTQLDQIKAARDRMARSLAVVRRELDEAIDELAISVPEAKAAMEEVGRSAQSGPD 504 M+ EAQSVRE++LADL ++R R +++Q++ R+R+ +L + R+ LD IDEL + P A AA E+ G + P+ Sbjct: 131 MVVEAQSVRERILADLARKRHEHRVEVEQLRVTRERLLEALGIFRQGLDGWIDELVQAEPRAAAAAEQAGLRVAAQPE 208
BLAST of mRNA_M-pyrifera_M_contig72876.17306.1 vs. uniprot
Match: A0A7K2A1Q0_9ACTN (Uncharacterized protein n=3 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2A1Q0_9ACTN) HSP 1 Score: 57.4 bits (137), Expect = 1.500e-6 Identity = 32/87 (36.78%), Postives = 55/87 (63.22%), Query Frame = 1 Query: 244 DRAREETRLMLAEAQSVREKVLADLVKRRRTGRTQLDQIKAARDRMARSLAVVRRELDEAIDELAISVPEAKAAMEEVGRSAQSGPD 504 + RE + M+ EAQSVRE++L+DL ++R R ++Q++ RDR+ +L + R+ LD I+EL + P A AA ++ G+ + P+ Sbjct: 122 EEGRERGKNMVVEAQSVRERILSDLARKRHEHRVAVEQLRVTRDRLLEALGIFRQGLDGWIEELVQAEPRAAAAAQQAGQRVAAQPE 208 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig72876.17306.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig72876.17306.1 >prot_M-pyrifera_M_contig72876.17306.1 ID=prot_M-pyrifera_M_contig72876.17306.1|Name=mRNA_M-pyrifera_M_contig72876.17306.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=168bp AKLVADAEAKATALTQESEAAAEKLLSDAKENASISDQAAHEAAEALRTTback to top mRNA from alignment at M-pyrifera_M_contig72876:1..504+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig72876.17306.1 ID=mRNA_M-pyrifera_M_contig72876.17306.1|Name=mRNA_M-pyrifera_M_contig72876.17306.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=504bp|location=Sequence derived from alignment at M-pyrifera_M_contig72876:1..504+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig72876:1..504+ >mRNA_M-pyrifera_M_contig72876.17306.1 ID=mRNA_M-pyrifera_M_contig72876.17306.1|Name=mRNA_M-pyrifera_M_contig72876.17306.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1008bp|location=Sequence derived from alignment at M-pyrifera_M_contig72876:1..504+ (Macrocystis pyrifera P11B4 male)back to top |