mRNA_M-pyrifera_M_contig72676.17264.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig72676.17264.1 vs. uniprot
Match: A0A5A8E3K0_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E3K0_CAFRO) HSP 1 Score: 142 bits (358), Expect = 3.170e-34 Identity = 119/315 (37.78%), Postives = 160/315 (50.79%), Query Frame = 1 Query: 1 IGSLNPVTKYYVRASAGNAVGLGELVEGGAA--TPPKQPPSAPTAPFVL-VEGSPYAASAGPVSIQVEWGAPEDDGGDDVTRYRVEWDVEPTFDSVDDGADGQPEGGADVDVDE---------GVA-----VGAYMYRIENLEAGRVYHVRIRAYNRARGFGSAATAVPAPIGGMQPPREPSS-VSAASSGSSGTQVRVDWAAPTPRFAGEQVTGYVVEWFTEAPSPPLFEVAQIQSVELTATADDLGGSFTLALGSAGEPSEDASSIAGLASVDPTNAGGVRLPGTVSISVGSSTIRTTEDLSSLVRRGDELYI 891 I L P +VR +AGN G GE A PP Q P+ PT+P G P G V+W AP GGD V RYRV+WD TFDS P G A V+ + G+A G Y +RIE LE G Y VR+ AYN ARG+G AA A AP G+ P P++ SA ++ + V+V ++AP+ + G V Y +E F EA + PLF+V ++ + ++A + FTLA G+A E + AS+ G AS V LPGTVS+ GS + T+ DLS +RRGD + + Sbjct: 9448 ISGLVPGVPVFVRLAAGNDRGFGEFTLSAPAGLAPPLQKPTKPTSPVRTDAAGRPQVVLVGATEAVVDWAAPAMSGGDPVVRYRVDWDTSATFDSAGAVDAPAPVGTAVVEASQLAGADPQGDGLANSTDATGLYRFRIEGLEPGSRYWVRVAAYNAARGWGEAAVA--APTQGVLPVALPAAPTSATATAEDASSVKVAFSAPSDQ-GGSPVVSYRIESFVEASAVPLFDVPEVHQLRVSAASGKPADVFTLAEGAA-EGAVLASTGNGPASFR------VALPGTVSLESGSLALATSADLSEYLRRGDVVLV 9752
BLAST of mRNA_M-pyrifera_M_contig72676.17264.1 vs. uniprot
Match: A0A5A8EDT7_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EDT7_CAFRO) HSP 1 Score: 142 bits (358), Expect = 3.170e-34 Identity = 119/315 (37.78%), Postives = 160/315 (50.79%), Query Frame = 1 Query: 1 IGSLNPVTKYYVRASAGNAVGLGELVEGGAA--TPPKQPPSAPTAPFVL-VEGSPYAASAGPVSIQVEWGAPEDDGGDDVTRYRVEWDVEPTFDSVDDGADGQPEGGADVDVDE---------GVA-----VGAYMYRIENLEAGRVYHVRIRAYNRARGFGSAATAVPAPIGGMQPPREPSS-VSAASSGSSGTQVRVDWAAPTPRFAGEQVTGYVVEWFTEAPSPPLFEVAQIQSVELTATADDLGGSFTLALGSAGEPSEDASSIAGLASVDPTNAGGVRLPGTVSISVGSSTIRTTEDLSSLVRRGDELYI 891 I L P +VR +AGN G GE A PP Q P+ PT+P G P G V+W AP GGD V RYRV+WD TFDS P G A V+ + G+A G Y +RIE LE G Y VR+ AYN ARG+G AA A AP G+ P P++ SA ++ + V+V ++AP+ + G V Y +E F EA + PLF+V ++ + ++A + FTLA G+A E + AS+ G AS V LPGTVS+ GS + T+ DLS +RRGD + + Sbjct: 9430 ISGLVPGVPVFVRLAAGNDRGFGEFTLSAPAGLAPPLQKPTKPTSPVRTDTAGRPQVVLVGATEAVVDWAAPAMSGGDPVVRYRVDWDTSATFDSAGAVDAPAPVGTAVVEASQLAGADPQGDGLANSTDATGLYRFRIEGLEPGSRYWVRVAAYNAARGWGEAAVA--APTQGVLPVALPAAPTSATATAEDASSVKVAFSAPSDQ-GGSPVVSYRIESFVEASAVPLFDVPEVHQLRVSAASGKPADVFTLAEGAA-EGAVLASTGNGPASFR------VALPGTVSLESGSLALATSADLSEYLRRGDVVLV 9734
BLAST of mRNA_M-pyrifera_M_contig72676.17264.1 vs. uniprot
Match: A0A5A8DUD1_CAFRO (Uncharacterized protein n=11 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DUD1_CAFRO) HSP 1 Score: 142 bits (358), Expect = 3.170e-34 Identity = 119/315 (37.78%), Postives = 160/315 (50.79%), Query Frame = 1 Query: 1 IGSLNPVTKYYVRASAGNAVGLGELVEGGAA--TPPKQPPSAPTAPFVL-VEGSPYAASAGPVSIQVEWGAPEDDGGDDVTRYRVEWDVEPTFDSVDDGADGQPEGGADVDVDE---------GVA-----VGAYMYRIENLEAGRVYHVRIRAYNRARGFGSAATAVPAPIGGMQPPREPSS-VSAASSGSSGTQVRVDWAAPTPRFAGEQVTGYVVEWFTEAPSPPLFEVAQIQSVELTATADDLGGSFTLALGSAGEPSEDASSIAGLASVDPTNAGGVRLPGTVSISVGSSTIRTTEDLSSLVRRGDELYI 891 I L P +VR +AGN G GE A PP Q P+ PT+P G P G V+W AP GGD V RYRV+WD TFDS P G A V+ + G+A G Y +RIE LE G Y VR+ AYN ARG+G AA A AP G+ P P++ SA ++ + V+V ++AP+ + G V Y +E F EA + PLF+V ++ + ++A + FTLA G+A E + AS+ G AS V LPGTVS+ GS + T+ DLS +RRGD + + Sbjct: 9489 ISGLVPGVPVFVRLAAGNDRGFGEFTLSAPAGLAPPLQKPTKPTSPVRTDAAGRPQVVLVGATEAVVDWAAPAMSGGDPVVRYRVDWDTSATFDSAGAVDAPAPVGTAVVEASQLAGADPQGDGLANSTDATGLYRFRIEGLEPGSRYWVRVAAYNAARGWGEAAVA--APTQGVLPVALPAAPTSATATAEDASSVKVAFSAPSDQ-GGSPVVSYRIESFVEASAVPLFDVPEVHQLRVSAASGKPADVFTLAEGAA-EGAVLASTGNGPASFR------VALPGTVSLESGSLALATSADLSEYLRRGDVVLV 9793
BLAST of mRNA_M-pyrifera_M_contig72676.17264.1 vs. uniprot
Match: A0A225X668_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X668_9STRA) HSP 1 Score: 109 bits (273), Expect = 5.260e-23 Identity = 102/304 (33.55%), Postives = 145/304 (47.70%), Query Frame = 1 Query: 1 IGSLNPVTKYYVRASAGNAVGLGE--LVEGGAATPPKQPPSAPTAPFVLVEGSPYAASAGPVSIQVEWGAPEDDGGDDVTRYRVEWDVEPTFDSVDDGADGQPEGGADVDVDEGVAV--GAYMYRIENLEAGRVYHVRIRAYNRARGFGSAATAVPAPIGGMQPPREPSSVSAASSGS---SGTQVRVDWAAPTPRFAGEQVTGYVVEWFTEAPSPPLFEVAQIQSVELTATADDLGGSFTLALGSAGEPSEDASSIAGLASVDPTNAGGVRLPGTVSISVGSSTIRTTEDLSSLVRRGDELYI 891 I L P T YY R +A NA+G G + + + P +PPS P +PF ++ P AG S+ V + P GG +TRY +EWD P FDS G++G VDV VA GA+ Y I+ L G+ +VR+ A N G G PA P PS V A + S SGT ++V W+ VT Y +EW+ +A + PLF IQ V+ T + GG F+L+ G D S++ P LPGTV + + ++T EDL+ L+ GD +++ Sbjct: 2387 ISGLTPGTTYYARVAAYNALGYGSRRVTAPTSLSVPFEPPSPPRSPFNIL-APPILTLAGSTSLMVSYAPPSFTGGVPLTRYVIEWDPSPEFDS---GSNGDALAQVTVDVSTLVATNDGAFRYIIDGLTKGQWVYVRMFARNGKVGDGVPVLTQPALDMPRGKPTAPSLVVAMNDLSVQPSGTSLKVSWSQ-----GSADVTQYEIEWYQQATTEPLFGTPVIQKVKSTGSIT--GGFFSLSFG-------DGSTLY------PWRL----LPGTVDVDHNAQFLKTNEDLTGLLAVGDVVFV 2662
BLAST of mRNA_M-pyrifera_M_contig72676.17264.1 vs. uniprot
Match: A0A7S0JRF8_CAFRO (Hypothetical protein (Fragment) n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0JRF8_CAFRO) HSP 1 Score: 90.1 bits (222), Expect = 1.780e-16 Identity = 91/274 (33.21%), Postives = 123/274 (44.89%), Query Frame = 1 Query: 1 IGSLNPVTKYYVRASAGNAVGLGELVEGGAATPPK----QPPSAPTAPFVLVEGSPYAASAGPVSIQVEWG--------APEDDGGDDVTRYRVEWDVEPTFDSVDDGADGQPEGGA-------DVDVDEGVAVGAYM-----YRIENLEAGRVYHVRIRAYNRARGFGSAATAVPAPIGGMQPPREPSSVSAAS---------SGSSG--------------TQVRVDWAAPTPRFAGEQVTGYVVEWFTEAPSPPLFEVAQIQ-SVELTATA 678 +G L+ Y+VR +A N + + G TPP + P+ P+A V P A V + V WG AP DGG++++ YRVEWDV TF S GA GQP G A +V + +A G + Y I L AG+ YHVR+ +GFG A A PAP +QPP P++V S SG +G T + W+AP G Y+VEWF A + P +V QI SV L +T+ Sbjct: 70 MGGLSAGQTYFVRINADNGLPFQAVSHTG--TPPDNRAFELPTPPSATPAKVAPGPSAN----VEVVVLWGDSLRVVFDAPIRDGGNNISSYRVEWDVASTFAS---GATGQPLGAATVLTTALEVVRPDSLAAGGNLPARLFYDITGLSAGQAYHVRVAPIGDVKGFGPFAVASPAPAVPVQPPSAPTNVRLLSTPLDAVTDLSGQNGASADEAEEEAHRPVTTLEASWSAPAST-GGAPTDSYLVEWFQAATARPEVQVVQIDNSVALASTS 333
BLAST of mRNA_M-pyrifera_M_contig72676.17264.1 vs. uniprot
Match: A0A6G0XJZ2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XJZ2_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 9.210e-15 Identity = 93/300 (31.00%), Postives = 136/300 (45.33%), Query Frame = 1 Query: 1 IGSLNPVTKYYVRASAGNAVGLG--ELVEGGAATPPKQPPSAPTAPFVLVEGSPYAASAGPVSIQVEWGAPEDDGGDDVTRYRVEWDVEPTFDSVDDGADGQPEGGADVDVDEGVAVGAYMYRIENLEAGRVYHVRIRAYNRARGFGSAATAVPAPIGGMQPPREPSSVS-AASSGSSGTQVRVDWAAPTPRFAGEQVTGYVVEWFTEAPSPPLFEVAQIQSVELTATADDLGGSFTLALGSAGEPSEDASSIAGLASVDPTNAGGVRLPGTVSISVGSSTIRTTEDLSSLVRRGDELYI 891 I L P T Y+VR SA ++G G L + P P+ PT+ V +P GP S+ V + GG + VEWD +F+S G G P G + G I++L +G+VY R+ N G G VP+ Q P +V+ AA + ++G+ + V W TP G ++GY+VEWFT+APS P F V Q Q + L++T GG+FT+A G P A + L G ++ G + I T+ DL+S + GD + I Sbjct: 8281 ITGLAPGTTYFVRVSAFTSLGYGLLRLTAPISEMVPYDVPAQPTS-LYNVAAAPVLYVTGPTSLLVAFKPTTFTGGAAIISCTVEWDTSSSFNS---GVAGAPIGATTL---LGNNANGAEVAIKSLTSGQVYFTRVFCSNNQLGAGPPIATVPSSEIPRQKPAVVGAVALAAGTDTTGSSMVVSW--NTPNSPGSSISGYMVEWFTKAPSVPYFGV-QAQQL-LSSTGVISGGTFTVAFG-------------------PVTA--LTLLGVINAVKGQNYITTSVDLTSYLYPGDLISI 8548
BLAST of mRNA_M-pyrifera_M_contig72676.17264.1 vs. uniprot
Match: A0A835Z451_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z451_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 1.310e-13 Identity = 81/245 (33.06%), Postives = 114/245 (46.53%), Query Frame = 1 Query: 25 KYYVRASAGNAVGLG--ELVEGGAATPPKQPPSAPTAPFVLVEGSPYAASAGPVSIQVEWGAPEDDGGDDVTRYRVEWDVEPTFDSVDDGADGQPEGGADVDVDEGVAVGAYM-YRIENLEAGRVYHVRIRAYNRARGFGSAATAV-PAPIGGMQPPREPSSVSAASSGSSGTQVRVDWAAPTPRFAGEQVTGYVVEWFT---------EAPSPPLFEVAQIQSVELTATADD--LGGSFTLALG 714 +Y R SA N+ GL ++ PP Q P+AP + V + AG S++V W APE DGG VT+Y++EWD P F+S G DG G + + + Y I +L G YHVRI AYN A GF ++A PA P+ P ++S A + Q P+ G QVT Y VEW + LF +QSV +++ A + +GG+F +A G Sbjct: 3467 QYTARVSARNSAGLSLPQVSTPAFLAPPVQAPAAPRSALV--------SPAGATSLRVLWFAPESDGGSSVTKYKIEWDTTPDFNS---GLDGGVLGSHQSVSTATMCINSPCEYVISSLTKGTPYHVRIFAYN-AYGFSASAVLTDPAAESPCTQPQPPPAISVAPLSDTAVQATFG---PSTDDGGRQVTSYRVEWDALGMELLNAGGSSVDALFGDDDVQSVTVSSAAANGLVGGTFYIANG 3696
BLAST of mRNA_M-pyrifera_M_contig72676.17264.1 vs. uniprot
Match: A0A7S3HBH6_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HBH6_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 1.350e-12 Identity = 67/188 (35.64%), Postives = 96/188 (51.06%), Query Frame = 1 Query: 1 IGSLNPVTKYYVRASAGNAVGLGELVEG-GAATPPKQPPSAPTAPFVLVEGSPYAASAGPVSIQVEWGAPEDDGGDDVTRYRVEWDVEPTFDSVDDGADGQPEGGADVDVDEGVAVGAYMYRIENLEAGRVYHVRIRAYNRARGFGSAATAVPAPIG-GMQPPREPSSVSAASSGSSGTQVRVDWAAP 558 I L + YVR SA N G G+ + P +P APT F+ S + V + AP DDGGDD+ RYR++WD+ PTF+ GA G P G V VD A Y I+ L G+VY+VR+ A N A G G+ A + PA + +Q P +P ++ AA++G+ ++ + W P Sbjct: 2087 ITGLQTGVRVYVRVSAMNNQGFGDSASSVPTSLNPYKPSDAPTQVFLR--------STSDTMLTVSFAAPRDDGGDDIVRYRIDWDITPTFN----GAVGAPNKGT-VQVD---ATRHSSYTIQYLTKGKVYYVRVFAINSA-GPGTPALSSPASLAPSLQVPGKPHTI-AATTGAIAGRINLSWIRP 2256
BLAST of mRNA_M-pyrifera_M_contig72676.17264.1 vs. uniprot
Match: F0YFV5_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YFV5_AURAN) HSP 1 Score: 75.9 bits (185), Expect = 1.560e-11 Identity = 73/190 (38.42%), Postives = 97/190 (51.05%), Query Frame = 1 Query: 1 IGSLNPVTKYYVRASAGNAVGLGELVEGGAATPPKQPPSAPTAPFVLVEGSPYAASAGPVS---IQVEWGAPEDDGGDDVTRYRVEWDVEPTFDSVDDGADGQPEGGADVDVDEGVAVGAYMYRIENLEAGRVYHVRIRAYNRARGFGSA-ATAVPAPIGGMQPPREPSSVSAASSGSSGTQVRVDWAAP 558 I SL +YYVR SAGN+ G G TP PS+ AP+ G+P G S + + + P DDGGDDV+ YRVEWD +F+S+ P G VDVD VA+ Y I+ L Y+VR+ N A G+G+A AT AP +Q P S+S A+ G+S +V V+W P Sbjct: 14770 ISSLTKGQEYYVRVSAGNSQGYG--------TPQSTAPSS-AAPYEE-SGAPSDVELGITSDSMLTIGYAYPADDGGDDVSSYRVEWDTSSSFNSL----SASPHKGT-VDVDASVAM---SYTIDELTTSTTYYVRVLPINAA-GYGTASATMSAAPA--LQVAGIPRSISVAA-GTSAGEVDVEWLYP 14937
BLAST of mRNA_M-pyrifera_M_contig72676.17264.1 vs. uniprot
Match: A0A662WJM8_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WJM8_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 3.210e-11 Identity = 77/241 (31.95%), Postives = 116/241 (48.13%), Query Frame = 1 Query: 1 IGSLNPVTKYYVRASAGNAVGLGELVEGGAATPPKQPPSAPTAPFVLVEGSPYAASAGPVSIQ---VEWGAPEDDGGDDVTRYRVEWDVEPTFDSVDDGADGQPEGGADVDVDEGVAVGAYMYRIENLEAGRVYHVRIRAYNRARGFGSAATAVPAPIGGMQPPREPSSVSAASSG-SSGTQVRVDWAAPTPRFAGEQVTGYVVEWFTEAPSPPLFEVAQIQSVELTATADDLGGSFTLAL 711 +G+LN Y VR SA N VG G+ A P Q P ++V G P A + +S+ V + P+DDGGD VT Y V+W ++ F + P V + GV+ Y I +L G Y+VR+RA N ++GFG + P +QP PS+ + + G +S T + V WA P+ G+ ++GYVV+W A F+ + + A +D L S+TL + Sbjct: 860 VGALNKGQLYNVRVSAYNVVGFGQP----AVAPAPQKP-------MVVPGLPTAVTLAVLSVSELVVLFSPPDDDGGDTVTGYEVQWAIDAAFTT--------PSSNI-VLMLTGVSA-PYRRVISSLTKGMRYYVRLRASN-SQGFGQFQLSSPT---ALQPYTTPSAPTQVALGVTSATMLTVRWAPPSDD-GGDAISGYVVQWDVAAG----FDSLALTTSTTAAVSDPLQRSYTLTM 1070 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig72676.17264.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig72676.17264.1 >prot_M-pyrifera_M_contig72676.17264.1 ID=prot_M-pyrifera_M_contig72676.17264.1|Name=mRNA_M-pyrifera_M_contig72676.17264.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=297bp IGSLNPVTKYYVRASAGNAVGLGELVEGGAATPPKQPPSAPTAPFVLVEGback to top mRNA from alignment at M-pyrifera_M_contig72676:1..930+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig72676.17264.1 ID=mRNA_M-pyrifera_M_contig72676.17264.1|Name=mRNA_M-pyrifera_M_contig72676.17264.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=930bp|location=Sequence derived from alignment at M-pyrifera_M_contig72676:1..930+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig72676:1..930+ >mRNA_M-pyrifera_M_contig72676.17264.1 ID=mRNA_M-pyrifera_M_contig72676.17264.1|Name=mRNA_M-pyrifera_M_contig72676.17264.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1782bp|location=Sequence derived from alignment at M-pyrifera_M_contig72676:1..930+ (Macrocystis pyrifera P11B4 male)back to top |