mRNA_M-pyrifera_M_contig72676.17264.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig72676.17264.1
Unique NamemRNA_M-pyrifera_M_contig72676.17264.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig72676.17264.1 vs. uniprot
Match: A0A5A8E3K0_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E3K0_CAFRO)

HSP 1 Score: 142 bits (358), Expect = 3.170e-34
Identity = 119/315 (37.78%), Postives = 160/315 (50.79%), Query Frame = 1
Query:    1 IGSLNPVTKYYVRASAGNAVGLGELVEGGAA--TPPKQPPSAPTAPFVL-VEGSPYAASAGPVSIQVEWGAPEDDGGDDVTRYRVEWDVEPTFDSVDDGADGQPEGGADVDVDE---------GVA-----VGAYMYRIENLEAGRVYHVRIRAYNRARGFGSAATAVPAPIGGMQPPREPSS-VSAASSGSSGTQVRVDWAAPTPRFAGEQVTGYVVEWFTEAPSPPLFEVAQIQSVELTATADDLGGSFTLALGSAGEPSEDASSIAGLASVDPTNAGGVRLPGTVSISVGSSTIRTTEDLSSLVRRGDELYI 891
            I  L P    +VR +AGN  G GE      A   PP Q P+ PT+P      G P     G     V+W AP   GGD V RYRV+WD   TFDS        P G A V+  +         G+A      G Y +RIE LE G  Y VR+ AYN ARG+G AA A  AP  G+ P   P++  SA ++    + V+V ++AP+ +  G  V  Y +E F EA + PLF+V ++  + ++A +      FTLA G+A E +  AS+  G AS        V LPGTVS+  GS  + T+ DLS  +RRGD + +
Sbjct: 9448 ISGLVPGVPVFVRLAAGNDRGFGEFTLSAPAGLAPPLQKPTKPTSPVRTDAAGRPQVVLVGATEAVVDWAAPAMSGGDPVVRYRVDWDTSATFDSAGAVDAPAPVGTAVVEASQLAGADPQGDGLANSTDATGLYRFRIEGLEPGSRYWVRVAAYNAARGWGEAAVA--APTQGVLPVALPAAPTSATATAEDASSVKVAFSAPSDQ-GGSPVVSYRIESFVEASAVPLFDVPEVHQLRVSAASGKPADVFTLAEGAA-EGAVLASTGNGPASFR------VALPGTVSLESGSLALATSADLSEYLRRGDVVLV 9752          
BLAST of mRNA_M-pyrifera_M_contig72676.17264.1 vs. uniprot
Match: A0A5A8EDT7_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EDT7_CAFRO)

HSP 1 Score: 142 bits (358), Expect = 3.170e-34
Identity = 119/315 (37.78%), Postives = 160/315 (50.79%), Query Frame = 1
Query:    1 IGSLNPVTKYYVRASAGNAVGLGELVEGGAA--TPPKQPPSAPTAPFVL-VEGSPYAASAGPVSIQVEWGAPEDDGGDDVTRYRVEWDVEPTFDSVDDGADGQPEGGADVDVDE---------GVA-----VGAYMYRIENLEAGRVYHVRIRAYNRARGFGSAATAVPAPIGGMQPPREPSS-VSAASSGSSGTQVRVDWAAPTPRFAGEQVTGYVVEWFTEAPSPPLFEVAQIQSVELTATADDLGGSFTLALGSAGEPSEDASSIAGLASVDPTNAGGVRLPGTVSISVGSSTIRTTEDLSSLVRRGDELYI 891
            I  L P    +VR +AGN  G GE      A   PP Q P+ PT+P      G P     G     V+W AP   GGD V RYRV+WD   TFDS        P G A V+  +         G+A      G Y +RIE LE G  Y VR+ AYN ARG+G AA A  AP  G+ P   P++  SA ++    + V+V ++AP+ +  G  V  Y +E F EA + PLF+V ++  + ++A +      FTLA G+A E +  AS+  G AS        V LPGTVS+  GS  + T+ DLS  +RRGD + +
Sbjct: 9430 ISGLVPGVPVFVRLAAGNDRGFGEFTLSAPAGLAPPLQKPTKPTSPVRTDTAGRPQVVLVGATEAVVDWAAPAMSGGDPVVRYRVDWDTSATFDSAGAVDAPAPVGTAVVEASQLAGADPQGDGLANSTDATGLYRFRIEGLEPGSRYWVRVAAYNAARGWGEAAVA--APTQGVLPVALPAAPTSATATAEDASSVKVAFSAPSDQ-GGSPVVSYRIESFVEASAVPLFDVPEVHQLRVSAASGKPADVFTLAEGAA-EGAVLASTGNGPASFR------VALPGTVSLESGSLALATSADLSEYLRRGDVVLV 9734          
BLAST of mRNA_M-pyrifera_M_contig72676.17264.1 vs. uniprot
Match: A0A5A8DUD1_CAFRO (Uncharacterized protein n=11 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DUD1_CAFRO)

HSP 1 Score: 142 bits (358), Expect = 3.170e-34
Identity = 119/315 (37.78%), Postives = 160/315 (50.79%), Query Frame = 1
Query:    1 IGSLNPVTKYYVRASAGNAVGLGELVEGGAA--TPPKQPPSAPTAPFVL-VEGSPYAASAGPVSIQVEWGAPEDDGGDDVTRYRVEWDVEPTFDSVDDGADGQPEGGADVDVDE---------GVA-----VGAYMYRIENLEAGRVYHVRIRAYNRARGFGSAATAVPAPIGGMQPPREPSS-VSAASSGSSGTQVRVDWAAPTPRFAGEQVTGYVVEWFTEAPSPPLFEVAQIQSVELTATADDLGGSFTLALGSAGEPSEDASSIAGLASVDPTNAGGVRLPGTVSISVGSSTIRTTEDLSSLVRRGDELYI 891
            I  L P    +VR +AGN  G GE      A   PP Q P+ PT+P      G P     G     V+W AP   GGD V RYRV+WD   TFDS        P G A V+  +         G+A      G Y +RIE LE G  Y VR+ AYN ARG+G AA A  AP  G+ P   P++  SA ++    + V+V ++AP+ +  G  V  Y +E F EA + PLF+V ++  + ++A +      FTLA G+A E +  AS+  G AS        V LPGTVS+  GS  + T+ DLS  +RRGD + +
Sbjct: 9489 ISGLVPGVPVFVRLAAGNDRGFGEFTLSAPAGLAPPLQKPTKPTSPVRTDAAGRPQVVLVGATEAVVDWAAPAMSGGDPVVRYRVDWDTSATFDSAGAVDAPAPVGTAVVEASQLAGADPQGDGLANSTDATGLYRFRIEGLEPGSRYWVRVAAYNAARGWGEAAVA--APTQGVLPVALPAAPTSATATAEDASSVKVAFSAPSDQ-GGSPVVSYRIESFVEASAVPLFDVPEVHQLRVSAASGKPADVFTLAEGAA-EGAVLASTGNGPASFR------VALPGTVSLESGSLALATSADLSEYLRRGDVVLV 9793          
BLAST of mRNA_M-pyrifera_M_contig72676.17264.1 vs. uniprot
Match: A0A225X668_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X668_9STRA)

HSP 1 Score: 109 bits (273), Expect = 5.260e-23
Identity = 102/304 (33.55%), Postives = 145/304 (47.70%), Query Frame = 1
Query:    1 IGSLNPVTKYYVRASAGNAVGLGE--LVEGGAATPPKQPPSAPTAPFVLVEGSPYAASAGPVSIQVEWGAPEDDGGDDVTRYRVEWDVEPTFDSVDDGADGQPEGGADVDVDEGVAV--GAYMYRIENLEAGRVYHVRIRAYNRARGFGSAATAVPAPIGGMQPPREPSSVSAASSGS---SGTQVRVDWAAPTPRFAGEQVTGYVVEWFTEAPSPPLFEVAQIQSVELTATADDLGGSFTLALGSAGEPSEDASSIAGLASVDPTNAGGVRLPGTVSISVGSSTIRTTEDLSSLVRRGDELYI 891
            I  L P T YY R +A NA+G G   +    + + P +PPS P +PF ++   P    AG  S+ V +  P   GG  +TRY +EWD  P FDS   G++G       VDV   VA   GA+ Y I+ L  G+  +VR+ A N   G G      PA       P  PS V A +  S   SGT ++V W+          VT Y +EW+ +A + PLF    IQ V+ T +    GG F+L+ G       D S++       P       LPGTV +   +  ++T EDL+ L+  GD +++
Sbjct: 2387 ISGLTPGTTYYARVAAYNALGYGSRRVTAPTSLSVPFEPPSPPRSPFNIL-APPILTLAGSTSLMVSYAPPSFTGGVPLTRYVIEWDPSPEFDS---GSNGDALAQVTVDVSTLVATNDGAFRYIIDGLTKGQWVYVRMFARNGKVGDGVPVLTQPALDMPRGKPTAPSLVVAMNDLSVQPSGTSLKVSWSQ-----GSADVTQYEIEWYQQATTEPLFGTPVIQKVKSTGSIT--GGFFSLSFG-------DGSTLY------PWRL----LPGTVDVDHNAQFLKTNEDLTGLLAVGDVVFV 2662          
BLAST of mRNA_M-pyrifera_M_contig72676.17264.1 vs. uniprot
Match: A0A7S0JRF8_CAFRO (Hypothetical protein (Fragment) n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0JRF8_CAFRO)

HSP 1 Score: 90.1 bits (222), Expect = 1.780e-16
Identity = 91/274 (33.21%), Postives = 123/274 (44.89%), Query Frame = 1
Query:    1 IGSLNPVTKYYVRASAGNAVGLGELVEGGAATPPK----QPPSAPTAPFVLVEGSPYAASAGPVSIQVEWG--------APEDDGGDDVTRYRVEWDVEPTFDSVDDGADGQPEGGA-------DVDVDEGVAVGAYM-----YRIENLEAGRVYHVRIRAYNRARGFGSAATAVPAPIGGMQPPREPSSVSAAS---------SGSSG--------------TQVRVDWAAPTPRFAGEQVTGYVVEWFTEAPSPPLFEVAQIQ-SVELTATA 678
            +G L+    Y+VR +A N +    +   G  TPP     + P+ P+A    V   P A     V + V WG        AP  DGG++++ YRVEWDV  TF S   GA GQP G A       +V   + +A G  +     Y I  L AG+ YHVR+      +GFG  A A PAP   +QPP  P++V   S         SG +G              T +   W+AP     G     Y+VEWF  A + P  +V QI  SV L +T+
Sbjct:   70 MGGLSAGQTYFVRINADNGLPFQAVSHTG--TPPDNRAFELPTPPSATPAKVAPGPSAN----VEVVVLWGDSLRVVFDAPIRDGGNNISSYRVEWDVASTFAS---GATGQPLGAATVLTTALEVVRPDSLAAGGNLPARLFYDITGLSAGQAYHVRVAPIGDVKGFGPFAVASPAPAVPVQPPSAPTNVRLLSTPLDAVTDLSGQNGASADEAEEEAHRPVTTLEASWSAPAST-GGAPTDSYLVEWFQAATARPEVQVVQIDNSVALASTS 333          
BLAST of mRNA_M-pyrifera_M_contig72676.17264.1 vs. uniprot
Match: A0A6G0XJZ2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XJZ2_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 9.210e-15
Identity = 93/300 (31.00%), Postives = 136/300 (45.33%), Query Frame = 1
Query:    1 IGSLNPVTKYYVRASAGNAVGLG--ELVEGGAATPPKQPPSAPTAPFVLVEGSPYAASAGPVSIQVEWGAPEDDGGDDVTRYRVEWDVEPTFDSVDDGADGQPEGGADVDVDEGVAVGAYMYRIENLEAGRVYHVRIRAYNRARGFGSAATAVPAPIGGMQPPREPSSVS-AASSGSSGTQVRVDWAAPTPRFAGEQVTGYVVEWFTEAPSPPLFEVAQIQSVELTATADDLGGSFTLALGSAGEPSEDASSIAGLASVDPTNAGGVRLPGTVSISVGSSTIRTTEDLSSLVRRGDELYI 891
            I  L P T Y+VR SA  ++G G   L    +   P   P+ PT+    V  +P     GP S+ V +      GG  +    VEWD   +F+S   G  G P G   +    G         I++L +G+VY  R+   N   G G     VP+     Q P    +V+ AA + ++G+ + V W   TP   G  ++GY+VEWFT+APS P F V Q Q + L++T    GG+FT+A G                   P  A  + L G ++   G + I T+ DL+S +  GD + I
Sbjct: 8281 ITGLAPGTTYFVRVSAFTSLGYGLLRLTAPISEMVPYDVPAQPTS-LYNVAAAPVLYVTGPTSLLVAFKPTTFTGGAAIISCTVEWDTSSSFNS---GVAGAPIGATTL---LGNNANGAEVAIKSLTSGQVYFTRVFCSNNQLGAGPPIATVPSSEIPRQKPAVVGAVALAAGTDTTGSSMVVSW--NTPNSPGSSISGYMVEWFTKAPSVPYFGV-QAQQL-LSSTGVISGGTFTVAFG-------------------PVTA--LTLLGVINAVKGQNYITTSVDLTSYLYPGDLISI 8548          
BLAST of mRNA_M-pyrifera_M_contig72676.17264.1 vs. uniprot
Match: A0A835Z451_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z451_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 1.310e-13
Identity = 81/245 (33.06%), Postives = 114/245 (46.53%), Query Frame = 1
Query:   25 KYYVRASAGNAVGLG--ELVEGGAATPPKQPPSAPTAPFVLVEGSPYAASAGPVSIQVEWGAPEDDGGDDVTRYRVEWDVEPTFDSVDDGADGQPEGGADVDVDEGVAVGAYM-YRIENLEAGRVYHVRIRAYNRARGFGSAATAV-PAPIGGMQPPREPSSVSAASSGSSGTQVRVDWAAPTPRFAGEQVTGYVVEWFT---------EAPSPPLFEVAQIQSVELTATADD--LGGSFTLALG 714
            +Y  R SA N+ GL   ++       PP Q P+AP +  V        + AG  S++V W APE DGG  VT+Y++EWD  P F+S   G DG   G         + + +   Y I +L  G  YHVRI AYN A GF ++A    PA       P+ P ++S A    +  Q       P+    G QVT Y VEW            +    LF    +QSV +++ A +  +GG+F +A G
Sbjct: 3467 QYTARVSARNSAGLSLPQVSTPAFLAPPVQAPAAPRSALV--------SPAGATSLRVLWFAPESDGGSSVTKYKIEWDTTPDFNS---GLDGGVLGSHQSVSTATMCINSPCEYVISSLTKGTPYHVRIFAYN-AYGFSASAVLTDPAAESPCTQPQPPPAISVAPLSDTAVQATFG---PSTDDGGRQVTSYRVEWDALGMELLNAGGSSVDALFGDDDVQSVTVSSAAANGLVGGTFYIANG 3696          
BLAST of mRNA_M-pyrifera_M_contig72676.17264.1 vs. uniprot
Match: A0A7S3HBH6_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HBH6_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 1.350e-12
Identity = 67/188 (35.64%), Postives = 96/188 (51.06%), Query Frame = 1
Query:    1 IGSLNPVTKYYVRASAGNAVGLGELVEG-GAATPPKQPPSAPTAPFVLVEGSPYAASAGPVSIQVEWGAPEDDGGDDVTRYRVEWDVEPTFDSVDDGADGQPEGGADVDVDEGVAVGAYMYRIENLEAGRVYHVRIRAYNRARGFGSAATAVPAPIG-GMQPPREPSSVSAASSGSSGTQVRVDWAAP 558
            I  L    + YVR SA N  G G+       +  P +P  APT  F+         S     + V + AP DDGGDD+ RYR++WD+ PTF+    GA G P  G  V VD   A     Y I+ L  G+VY+VR+ A N A G G+ A + PA +   +Q P +P ++ AA++G+   ++ + W  P
Sbjct: 2087 ITGLQTGVRVYVRVSAMNNQGFGDSASSVPTSLNPYKPSDAPTQVFLR--------STSDTMLTVSFAAPRDDGGDDIVRYRIDWDITPTFN----GAVGAPNKGT-VQVD---ATRHSSYTIQYLTKGKVYYVRVFAINSA-GPGTPALSSPASLAPSLQVPGKPHTI-AATTGAIAGRINLSWIRP 2256          
BLAST of mRNA_M-pyrifera_M_contig72676.17264.1 vs. uniprot
Match: F0YFV5_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YFV5_AURAN)

HSP 1 Score: 75.9 bits (185), Expect = 1.560e-11
Identity = 73/190 (38.42%), Postives = 97/190 (51.05%), Query Frame = 1
Query:    1 IGSLNPVTKYYVRASAGNAVGLGELVEGGAATPPKQPPSAPTAPFVLVEGSPYAASAGPVS---IQVEWGAPEDDGGDDVTRYRVEWDVEPTFDSVDDGADGQPEGGADVDVDEGVAVGAYMYRIENLEAGRVYHVRIRAYNRARGFGSA-ATAVPAPIGGMQPPREPSSVSAASSGSSGTQVRVDWAAP 558
            I SL    +YYVR SAGN+ G G        TP    PS+  AP+    G+P     G  S   + + +  P DDGGDDV+ YRVEWD   +F+S+       P  G  VDVD  VA+    Y I+ L     Y+VR+   N A G+G+A AT   AP   +Q    P S+S A+ G+S  +V V+W  P
Sbjct: 14770 ISSLTKGQEYYVRVSAGNSQGYG--------TPQSTAPSS-AAPYEE-SGAPSDVELGITSDSMLTIGYAYPADDGGDDVSSYRVEWDTSSSFNSL----SASPHKGT-VDVDASVAM---SYTIDELTTSTTYYVRVLPINAA-GYGTASATMSAAPA--LQVAGIPRSISVAA-GTSAGEVDVEWLYP 14937          
BLAST of mRNA_M-pyrifera_M_contig72676.17264.1 vs. uniprot
Match: A0A662WJM8_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WJM8_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 3.210e-11
Identity = 77/241 (31.95%), Postives = 116/241 (48.13%), Query Frame = 1
Query:    1 IGSLNPVTKYYVRASAGNAVGLGELVEGGAATPPKQPPSAPTAPFVLVEGSPYAASAGPVSIQ---VEWGAPEDDGGDDVTRYRVEWDVEPTFDSVDDGADGQPEGGADVDVDEGVAVGAYMYRIENLEAGRVYHVRIRAYNRARGFGSAATAVPAPIGGMQPPREPSSVSAASSG-SSGTQVRVDWAAPTPRFAGEQVTGYVVEWFTEAPSPPLFEVAQIQSVELTATADDLGGSFTLAL 711
            +G+LN    Y VR SA N VG G+     A  P  Q P       ++V G P A +   +S+    V +  P+DDGGD VT Y V+W ++  F +        P     V +  GV+   Y   I +L  G  Y+VR+RA N ++GFG    + P     +QP   PS+ +  + G +S T + V WA P+    G+ ++GYVV+W   A     F+   + +    A +D L  S+TL +
Sbjct:  860 VGALNKGQLYNVRVSAYNVVGFGQP----AVAPAPQKP-------MVVPGLPTAVTLAVLSVSELVVLFSPPDDDGGDTVTGYEVQWAIDAAFTT--------PSSNI-VLMLTGVSA-PYRRVISSLTKGMRYYVRLRASN-SQGFGQFQLSSPT---ALQPYTTPSAPTQVALGVTSATMLTVRWAPPSDD-GGDAISGYVVQWDVAAG----FDSLALTTSTTAAVSDPLQRSYTLTM 1070          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig72676.17264.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8E3K0_CAFRO3.170e-3437.78Uncharacterized protein n=1 Tax=Cafeteria roenberg... [more]
A0A5A8EDT7_CAFRO3.170e-3437.78Uncharacterized protein n=1 Tax=Cafeteria roenberg... [more]
A0A5A8DUD1_CAFRO3.170e-3437.78Uncharacterized protein n=11 Tax=Cafeteria roenber... [more]
A0A225X668_9STRA5.260e-2333.55Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
A0A7S0JRF8_CAFRO1.780e-1633.21Hypothetical protein (Fragment) n=1 Tax=Cafeteria ... [more]
A0A6G0XJZ2_9STRA9.210e-1531.00Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A835Z451_9STRA1.310e-1333.06Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A7S3HBH6_9STRA1.350e-1235.64Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
F0YFV5_AURAN1.560e-1138.42Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A662WJM8_9STRA3.210e-1131.95Uncharacterized protein (Fragment) n=2 Tax=Nothoph... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig72676contigM-pyrifera_M_contig72676:1..930 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score126.7
Seed ortholog evalue1.8e-26
Seed eggNOG ortholog67593.Physo137074
KEGG koko:K12567
KEGG Pathwayko05410,ko05414,map05410,map05414
Hectar predicted targeting categoryother localisation
EggNOG free text desc.PA14
EggNOG OGs3QF4W@4776,KOG0613@1,KOG0613@2759
EC2.7.11.1
COG Functional cat.Z
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001,ko04131,ko04147,ko04812
Exons2
Model size891
Cds size891
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816623.0477216-CDS-M-pyrifera_M_contig72676:0..3501622816623.0477216-CDS-M-pyrifera_M_contig72676:0..350Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig72676 1..350 +
1692278082.8280866-CDS-M-pyrifera_M_contig72676:0..3501692278082.8280866-CDS-M-pyrifera_M_contig72676:0..350Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig72676 1..350 +
1622816623.0669715-CDS-M-pyrifera_M_contig72676:389..9301622816623.0669715-CDS-M-pyrifera_M_contig72676:389..930Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig72676 390..930 +
1692278082.8422308-CDS-M-pyrifera_M_contig72676:389..9301692278082.8422308-CDS-M-pyrifera_M_contig72676:389..930Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig72676 390..930 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig72676.17264.1prot_M-pyrifera_M_contig72676.17264.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig72676 1..930 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig72676.17264.1

>prot_M-pyrifera_M_contig72676.17264.1 ID=prot_M-pyrifera_M_contig72676.17264.1|Name=mRNA_M-pyrifera_M_contig72676.17264.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=297bp
IGSLNPVTKYYVRASAGNAVGLGELVEGGAATPPKQPPSAPTAPFVLVEG
SPYAASAGPVSIQVEWGAPEDDGGDDVTRYRVEWDVEPTFDSVDDGADGQ
PEGGADVDVDEGVAVGAYMYRIENLEAGRVYHVRIRAYNRARGFGSAATA
VPAPIGGMQPPREPSSVSAASSGSSGTQVRVDWAAPTPRFAGEQVTGYVV
EWFTEAPSPPLFEVAQIQSVELTATADDLGGSFTLALGSAGEPSEDASSI
AGLASVDPTNAGGVRLPGTVSISVGSSTIRTTEDLSSLVRRGDELYI
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mRNA from alignment at M-pyrifera_M_contig72676:1..930+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig72676.17264.1 ID=mRNA_M-pyrifera_M_contig72676.17264.1|Name=mRNA_M-pyrifera_M_contig72676.17264.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=930bp|location=Sequence derived from alignment at M-pyrifera_M_contig72676:1..930+ (Macrocystis pyrifera P11B4 male)
ATTGGTAGTCTCAACCCTGTAACCAAGTACTATGTCCGTGCATCCGCTGG GAACGCTGTTGGTCTTGGTGAATTGGTGGAAGGTGGTGCAGCAACACCAC CAAAACAGCCACCTTCAGCACCAACCGCACCATTTGTACTTGTGGAAGGA AGTCCATATGCTGCAAGCGCTGGACCTGTTTCGATTCAAGTGGAATGGGG AGCACCAGAGGATGATGGTGGGGATGATGTAACAAGGTATCGTGTGGAAT GGGATGTGGAGCCAACGTTTGATTCTGTGGATGATGGAGCTGATGGACAA CCAGAAGGTGGAGCTGATGTTGATGTGGATGAAGGTGTTGCTGTTGGTGC GTATGCAAATGCATCCATCTCAAGCAATGCGTCATTGAGTTACATGTACC GTATCGAAAACCTCGAAGCTGGACGTGTGTATCATGTGCGAATTCGAGCG TACAACCGAGCTCGTGGATTTGGATCTGCTGCAACTGCAGTACCTGCACC AATTGGTGGTATGCAACCACCAAGAGAACCAAGCAGTGTGAGTGCTGCAT CAAGTGGTTCAAGTGGTACCCAAGTTCGTGTTGATTGGGCAGCACCAACA CCACGCTTTGCTGGAGAACAAGTGACTGGATATGTTGTGGAATGGTTCAC AGAAGCACCTTCTCCACCATTGTTTGAAGTTGCTCAAATTCAAAGTGTTG AACTCACAGCAACTGCTGATGATCTTGGTGGTAGCTTCACCCTTGCACTT GGATCTGCTGGTGAACCTTCTGAGGATGCTTCCAGCATTGCTGGCCTTGC ATCTGTGGATCCAACCAATGCCGGTGGTGTTCGTTTGCCAGGTACTGTTT CTATTTCTGTTGGAAGTTCAACCATTCGTACAACAGAAGATCTCTCTTCT CTTGTGCGCCGTGGGGATGAACTTTACATC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig72676:1..930+

>mRNA_M-pyrifera_M_contig72676.17264.1 ID=mRNA_M-pyrifera_M_contig72676.17264.1|Name=mRNA_M-pyrifera_M_contig72676.17264.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1782bp|location=Sequence derived from alignment at M-pyrifera_M_contig72676:1..930+ (Macrocystis pyrifera P11B4 male)
ATTGGTAGTCTCAACCCTGTAACCAAGTACTATGTCCGTGCATCCGCTGG
GAACGCTGTTGGTCTTGGTGAATTGGTGGAAGGTGGTGCAGCAACACCAC
CAAAACAGCCACCTTCAGCACCAACCGCACCATTTGTACTTGTGGAAGGA
AGTCCATATGCTGCAAGCGCTGGACCTGTTTCGATTCAAGTGGAATGGGG
AGCACCAGAGGATGATGGTGGGGATGATGTAACAAGGTATCGTGTGGAAT
GGGATGTGGAGCCAACGTTTGATTCTGTGGATGATGGAGCTGATGGACAA
CCAGAAGGTGGAGCTGATGTTGATGTGGATGAAGGTGTTGCTGTTGGTGC
ATTGGTAGTCTCAACCCTGTAACCAAGTACTATGTCCGTGCATCCGCTGG
GAACGCTGTTGGTCTTGGTGAATTGGTGGAAGGTGGTGCAGCAACACCAC
CAAAACAGCCACCTTCAGCACCAACCGCACCATTTGTACTTGTGGAAGGA
AGTCCATATGCTGCAAGCGCTGGACCTGTTTCGATTCAAGTGGAATGGGG
AGCACCAGAGGATGATGGTGGGGATGATGTAACAAGGTATCGTGTGGAAT
GGGATGTGGAGCCAACGTTTGATTCTGTGGATGATGGAGCTGATGGACAA
CCAGAAGGTGGAGCTGATGTTGATGTGGATGAAGGTGTTGCTGTTGGTGC
TTACATGTACCGTATCGAAAACCTCGAAGCTGGACGTGTGTATCATGTGC
GAATTCGAGCGTACAACCGAGCTCGTGGATTTGGATCTGCTGCAACTGCA
GTACCTGCACCAATTGGTGGTATGCAACCACCAAGAGAACCAAGCAGTGT
GAGTGCTGCATCAAGTGGTTCAAGTGGTACCCAAGTTCGTGTTGATTGGG
CAGCACCAACACCACGCTTTGCTGGAGAACAAGTGACTGGATATGTTGTG
GAATGGTTCACAGAAGCACCTTCTCCACCATTGTTTGAAGTTGCTCAAAT
TCAAAGTGTTGAACTCACAGCAACTGCTGATGATCTTGGTGGTAGCTTCA
CCCTTGCACTTGGATCTGCTGGTGAACCTTCTGAGGATGCTTCCAGCATT
GCTGGCCTTGCATCTGTGGATCCAACCAATGCCGGTGGTGTTCGTTTGCC
AGGTACTGTTTCTATTTCTGTTGGAAGTTCAACCATTCGTACAACAGAAG
ATCTCTCTTCTCTTGTGCGCCGTGGGGATGAACTTTACATCTTACATGTA
CCGTATCGAAAACCTCGAAGCTGGACGTGTGTATCATGTGCGAATTCGAG
CGTACAACCGAGCTCGTGGATTTGGATCTGCTGCAACTGCAGTACCTGCA
CCAATTGGTGGTATGCAACCACCAAGAGAACCAAGCAGTGTGAGTGCTGC
ATCAAGTGGTTCAAGTGGTACCCAAGTTCGTGTTGATTGGGCAGCACCAA
CACCACGCTTTGCTGGAGAACAAGTGACTGGATATGTTGTGGAATGGTTC
ACAGAAGCACCTTCTCCACCATTGTTTGAAGTTGCTCAAATTCAAAGTGT
TGAACTCACAGCAACTGCTGATGATCTTGGTGGTAGCTTCACCCTTGCAC
TTGGATCTGCTGGTGAACCTTCTGAGGATGCTTCCAGCATTGCTGGCCTT
GCATCTGTGGATCCAACCAATGCCGGTGGTGTTCGTTTGCCAGGTACTGT
TTCTATTTCTGTTGGAAGTTCAACCATTCGTACAACAGAAGATCTCTCTT
CTCTTGTGCGCCGTGGGGATGAACTTTACATC
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