mRNA_M-pyrifera_M_contig72588.17248.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig72588.17248.1
Unique NamemRNA_M-pyrifera_M_contig72588.17248.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig72588.17248.1 vs. uniprot
Match: A0A2E3MKN7_9GAMM (Type IV-A pilus assembly ATPase PilB n=1 Tax=Legionellales bacterium TaxID=2026754 RepID=A0A2E3MKN7_9GAMM)

HSP 1 Score: 535 bits (1379), Expect = 5.750e-186
Identity = 272/370 (73.51%), Postives = 320/370 (86.49%), Query Frame = 1
Query:    1 LYVAVSDPTNLAALNEFKFQTGINTHAILIEENKLAKAIEEVLHAKETAVFDDLEDADLETLDISTGDDEGDQVSEKDAAEDAPIVRFVHKIILDAINSKVSDIHFEPYDRSYRIRYRRDGILYEAAAPPITLAARITARLKVMSRLDISERRIPQDGHFKMTLSKNRTIDFRISTLPTIAGEKVVIRVLDPATAELGVEALGFTEEQREKFAEAIIKPQGMVLVTGPTGSGKTVTLYTALNMLNGMESNISTVEDPVEINLQGINQVNVNNKAGLNFANALRAFLRQDPDIIMVGEVRDLETAEIAIKAAHTGHMLLSTLHTNSAAETLTRLSSMGVPHYNIGSTVSLVIAQRLARRLCATCRAPVDLP 1110
            LYVA+SDPTNLAALN+FKF TGINTH IL+EENKLAK IE+VL  +E A   DL D DL+ LDI+TG+ E D VS+K+A EDAPIVRFV+KI++DAIN  VSDIHFEPY++ YR+RYRRDGILYE A PP+ LA +ITARLKV+SRLDISERRIPQDGHFKM LSKNR IDFR+S+ PT+ GEKVV+RVLDP++A++G++ LG+ + Q+E F  AI  PQGMVLVTGPTGSGKT++LYTALN+LN  E NIST+EDPVEINL GINQVNVN KAGL+FA ALRAFLRQDPDI+MVGE+RDLETAEIAIKAA TGH++LSTLHTNSA ETLTRL++MGVP +NI ++VSL+IAQRLARRLC  CR   D+P
Sbjct:   96 LYVAISDPTNLAALNDFKFHTGINTHGILVEENKLAKIIEDVLEEQEAAALGDLTDTDLDELDITTGELEQDDVSDKEA-EDAPIVRFVNKILIDAINKGVSDIHFEPYEKKYRVRYRRDGILYETAVPPLNLAPKITARLKVLSRLDISERRIPQDGHFKMVLSKNRAIDFRVSSCPTVGGEKVVLRVLDPSSAKIGIDELGYEKFQKEMFLTAIGHPQGMVLVTGPTGSGKTISLYTALNILNEEERNISTIEDPVEINLPGINQVNVNTKAGLDFATALRAFLRQDPDIVMVGEIRDLETAEIAIKAAQTGHLVLSTLHTNSAPETLTRLANMGVPTFNIATSVSLIIAQRLARRLCTHCRVTEDVP 464          
BLAST of mRNA_M-pyrifera_M_contig72588.17248.1 vs. uniprot
Match: A0A369CIR4_9GAMM (Type IV pilus assembly protein PilB n=1 Tax=Thioalbus denitrificans TaxID=547122 RepID=A0A369CIR4_9GAMM)

HSP 1 Score: 499 bits (1285), Expect = 1.340e-171
Identity = 259/371 (69.81%), Postives = 312/371 (84.10%), Query Frame = 1
Query:    1 LYVAVSDPTNLAALNEFKFQTGINTHAILIEENKLAKAIEEVLHAKETAVFDDLEDADLETLDISTGDD-EGDQVSEKDAAEDAPIVRFVHKIILDAINSKVSDIHFEPYDRSYRIRYRRDGILYEAAAPPITLAARITARLKVMSRLDISERRIPQDGHFKMTLSKNRTIDFRISTLPTIAGEKVVIRVLDPATAELGVEALGFTEEQREKFAEAIIKPQGMVLVTGPTGSGKTVTLYTALNMLNGMESNISTVEDPVEINLQGINQVNVNNKAGLNFANALRAFLRQDPDIIMVGEVRDLETAEIAIKAAHTGHMLLSTLHTNSAAETLTRLSSMGVPHYNIGSTVSLVIAQRLARRLCATCRAPVDLP 1110
            LYV ++DPTNL AL+E KF TGINT A+++EE+KL++ I+ V+ A+E     DL D+DL+ LDIS GD+   D+V + D  +DAPIVRFV+K++LDAIN   SDIHFEPY+R+YR+R+R+DGIL+E A+PP+TL +RI ARLKVMSRLDISERRIPQDG  KMTLSKNR IDFR+ST PT+ GEKVV+R+LDPA+A LGV+ALGF E Q++ F   I KPQGMVLVTGPTGSGKTVTLYTAL++LN  + NISTVEDPVEINL GINQVN++ KAGL FA+ALRAFLRQDPDIIMVGE+RDLETAEI IKAA TGHM+LSTLHTNSA ETLTRL++MGV  +NI STV+L+IAQRLARRLC  CR   ++P
Sbjct:  105 LYVGLADPTNLQALDEIKFHTGINTDAVVVEESKLSRFIDRVVEAQEATNLGDLSDSDLDGLDISGGDELPQDEVRDTDV-DDAPIVRFVNKVMLDAINKGASDIHFEPYERNYRVRFRQDGILHEMASPPVTLGSRIAARLKVMSRLDISERRIPQDGRIKMTLSKNRAIDFRVSTCPTLYGEKVVMRILDPASARLGVDALGFEEAQKDLFQRVIHKPQGMVLVTGPTGSGKTVTLYTALSILNTPDKNISTVEDPVEINLPGINQVNIHPKAGLTFASALRAFLRQDPDIIMVGEIRDLETAEIGIKAAQTGHMVLSTLHTNSAPETLTRLANMGVAPFNIASTVTLIIAQRLARRLCPHCRREEEVP 474          
BLAST of mRNA_M-pyrifera_M_contig72588.17248.1 vs. uniprot
Match: A0A525BXC0_9GAMM (Type IV-A pilus assembly ATPase PilB n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A525BXC0_9GAMM)

HSP 1 Score: 496 bits (1278), Expect = 1.140e-170
Identity = 243/371 (65.50%), Postives = 318/371 (85.71%), Query Frame = 1
Query:    1 LYVAVSDPTNLAALNEFKFQTGINTHAILIEENKLAKAIEEVLHAKETAVFDDLEDADLETLDISTGDDEGDQVSEKDAAEDAPIVRFVHKIILDAINSKVSDIHFEPYDRSYRIRYRRDGILYEAAAPPITLAARITARLKVMSRLDISERRIPQDGHFKMTLSKNRTIDFRISTLPTIAGEKVVIRVLDPATAELGVEALGFTEEQREKFAEAIIKPQGMVLVTGPTGSGKTVTLYTALNMLNGMESNISTVEDPVEINLQGINQVNVNNKAGLNFANALRAFLRQDPDIIMVGEVRDLETAEIAIKAAHTGHMLLSTLHTNSAAETLTRLSSMGVPHYNIGSTVSLVIAQRLARRLCATCRAPVDLPK 1113
            L+VAVSDPTNL A++EFKF TGI+T  +L+EENKL KAIE+VL A+++A   D+ D D E +DIS+G++E + V + D  +DAP+VRFV+K++LDAIN   SDIHFEPY+++YR+R+R+DG+L+E A PPITLA R+ AR+KVMSRLDI+ERR+PQDG  KM LSKNR+IDFR+++ PT+ GEK+V+R+LDP++++LG+E LG+ + QRE++ +A+  P GM+LVTGPTGSGKTV+LYT LN+LN  ++NISTVEDPVE+N+QGINQVN N KAGL+F++ALRAFLRQDPD+IMVGE+RDLETAEIAIKAA TGH++LSTLHTN A +TLTRL++MGVP +NI S V+L+IAQRLARRLC  C+  VD+PK
Sbjct:   96 LFVAVSDPTNLQAIDEFKFHTGISTDPVLVEENKLNKAIEDVLSAQDSANIGDMLDEDYENIDISSGEEEQNTVDDSDI-DDAPVVRFVNKVLLDAINKGASDIHFEPYEKTYRVRFRQDGVLHEVANPPITLANRLAARVKVMSRLDIAERRVPQDGRIKMNLSKNRSIDFRVNSCPTVWGEKIVLRILDPSSSQLGIEMLGYEDSQRERYEKALASPYGMILVTGPTGSGKTVSLYTGLNILNTPDTNISTVEDPVEMNIQGINQVNTNMKAGLDFSSALRAFLRQDPDVIMVGEIRDLETAEIAIKAALTGHLVLSTLHTNDAPQTLTRLANMGVPAFNIASAVTLIIAQRLARRLCNHCKTKVDIPK 465          
BLAST of mRNA_M-pyrifera_M_contig72588.17248.1 vs. uniprot
Match: A0A257SY80_9GAMM (Type IV-A pilus assembly ATPase PilB n=1 Tax=Chromatiales bacterium 21-64-14 TaxID=1970504 RepID=A0A257SY80_9GAMM)

HSP 1 Score: 497 bits (1279), Expect = 1.160e-170
Identity = 250/376 (66.49%), Postives = 316/376 (84.04%), Query Frame = 1
Query:    1 LYVAVSDPTNLAALNEFKFQTGINTHAILIEENKLAKAIEEVLHAKETAVFDDLEDADLETLDISTGDDEGDQVSEKD---AAEDAPIVRFVHKIILDAINSKVSDIHFEPYDRSYRIRYRRDGILYEAAAPPITLAARITARLKVMSRLDISERRIPQDGHFKMTLSKNRTIDFRISTLPTIAGEKVVIRVLDPATAELGVEALGFTEEQREKFAEAIIKPQGMVLVTGPTGSGKTVTLYTALNMLNGMESNISTVEDPVEINLQGINQVNVNNKAGLNFANALRAFLRQDPDIIMVGEVRDLETAEIAIKAAHTGHMLLSTLHTNSAAETLTRLSSMGVPHYNIGSTVSLVIAQRLARRLCATCRAPVDLPKSV 1119
            LYVAVS+PTNL AL++ KF TGI+T AIL+EE+KL KAIE  L A +TA+ D L DADL+ +D S   D G++ +  +     +D P+VRFV+K++LDAIN   SDIHFEPY++++R+R R+DG+LYE A+PPI LA+RI+AR+KVMSR+DI+ERR+PQDG  KMTLSK+R IDFR+++ PT+ GEK+V+R+LDP++A+LG+EALG+ ++Q++ + EA+ KP GMVLVTGPTGSGKTV+LYT LN+LN  + NISTVEDPVEIN+ GINQVN+N+KAGL FA ALRAFLRQDPD+IMVGE+RDLETAEIAIKAA TGHM+LSTLHTN A +TLTRL +MGVP YNI S+VSL+IAQRLARRLC  CR PVD+PK V
Sbjct:  105 LYVAVSEPTNLQALDDIKFHTGISTEAILVEEDKLTKAIERALEANDTALSD-LLDADLDNVDFSAEPDSGNESAADNLDSGIDDTPVVRFVNKVLLDAINKGASDIHFEPYEKTFRVRLRQDGVLYEIASPPINLASRISARIKVMSRMDIAERRVPQDGRIKMTLSKSRAIDFRVNSCPTLFGEKIVLRILDPSSAKLGIEALGYEDDQKQLYLEALHKPYGMVLVTGPTGSGKTVSLYTGLNILNTADRNISTVEDPVEINMPGINQVNMNSKAGLTFAEALRAFLRQDPDVIMVGEIRDLETAEIAIKAAQTGHMVLSTLHTNDAPQTLTRLMNMGVPSYNIASSVSLIIAQRLARRLCNHCRRPVDVPKEV 479          
BLAST of mRNA_M-pyrifera_M_contig72588.17248.1 vs. uniprot
Match: A0A2E2TK31_9GAMM (Type IV-A pilus assembly ATPase PilB n=1 Tax=Legionellales bacterium TaxID=2026754 RepID=A0A2E2TK31_9GAMM)

HSP 1 Score: 494 bits (1272), Expect = 1.210e-169
Identity = 255/371 (68.73%), Postives = 311/371 (83.83%), Query Frame = 1
Query:    1 LYVAVSDPTNLAALNEFKFQTGINTHAILIEENKLAKAIEEVLHAKETAVFDDLEDADLETLDISTGDDEGDQVSEKDAAEDAPIVRFVHKIILDAINSKVSDIHFEPYDRSYRIRYRRDGILYEAAAPPITLAARITARLKVMSRLDISERRIPQDGHFKMTLSKNRTIDFRISTLPTIAGEKVVIRVLDPATAELGVEALGFTEEQREKFAEAIIKPQGMVLVTGPTGSGKTVTLYTALNMLNGMESNISTVEDPVEINLQGINQVNVNNKAGLNFANALRAFLRQDPDIIMVGEVRDLETAEIAIKAAHTGHMLLSTLHTNSAAETLTRLSSMGVPHYNIGSTVSLVIAQRLARRLCATCRAPVDLPK 1113
            LYVA+SDPTN+ AL++FKF TG+NT+ IL+E++KL   IE VL  +  AV  DL DADL+ +D+S+  +E ++VS  +  EDAPIVRFV+KI+LDAI   VSDIHFEPY++ YRIR+RRDGILYE A PPI LA RITAR+KV+SR+DISERR+PQDGHF M LSK+ TI+FR++T PT AGEKVVIR+LDP+  +LG+E LG+ E Q++ F   I KPQGMVLVTGPTGSGKTV+LYTAL+MLN  E NIST+EDPVEIN+QGINQV+VNNKAGLNFA+ALRAFLRQDPDIIMVGE+RDLETAEIAIKAA TGH++LSTLHTN+A ETLTRL +MGV  +NI ++V+L+IAQRLARRLC  C+    +PK
Sbjct:  104 LYVAISDPTNVIALSDFKFHTGLNTYGILVEDDKLVHIIEHVLSQETEAVLGDLNDADLDDIDLSSEIEE-EEVSISET-EDAPIVRFVNKILLDAIKKGVSDIHFEPYEKVYRIRFRRDGILYETANPPINLANRITARIKVISRMDISERRVPQDGHFNMALSKSNTINFRVNTCPTTAGEKVVIRILDPSKLQLGIEDLGYEENQKKAFVSTIHKPQGMVLVTGPTGSGKTVSLYTALHMLNTPEKNISTIEDPVEINIQGINQVHVNNKAGLNFASALRAFLRQDPDIIMVGEIRDLETAEIAIKAAQTGHLVLSTLHTNNAPETLTRLVNMGVAPFNIATSVNLIIAQRLARRLCKHCKEEESIPK 472          
BLAST of mRNA_M-pyrifera_M_contig72588.17248.1 vs. uniprot
Match: A0A0Q9YUP1_9COXI (Type II secretion system protein E n=1 Tax=Candidatus Berkiella aquae TaxID=295108 RepID=A0A0Q9YUP1_9COXI)

HSP 1 Score: 493 bits (1269), Expect = 3.330e-169
Identity = 251/370 (67.84%), Postives = 304/370 (82.16%), Query Frame = 1
Query:    1 LYVAVSDPTNLAALNEFKFQTGINTHAILIEENKLAKAIEEVLHAKETAVFDDLEDADLETLDISTGDDEGDQVSEKDAAEDAPIVRFVHKIILDAINSKVSDIHFEPYDRSYRIRYRRDGILYEAAAPPITLAARITARLKVMSRLDISERRIPQDGHFKMTLSKNRTIDFRISTLPTIAGEKVVIRVLDPATAELGVEALGFTEEQREKFAEAIIKPQGMVLVTGPTGSGKTVTLYTALNMLNGMESNISTVEDPVEINLQGINQVNVNNKAGLNFANALRAFLRQDPDIIMVGEVRDLETAEIAIKAAHTGHMLLSTLHTNSAAETLTRLSSMGVPHYNIGSTVSLVIAQRLARRLCATCRAPVDLP 1110
            L+VAVSDPTNL AL+EFKF TGI+T AI++EE KL + IE++L   E++  DDL+D+DL+ LDIS+ D E          +DAPIVRFV+K++LDAIN   SDIHFEPY++ YR+R R+DGIL E AAPP+ LA R+ ARLKVMSRLDISERR+PQDG FKM LS+NR IDFR+ST PT+ GEKVV+R+LDP++A++G++ALG+ E Q+  F  AI KPQGMVLVTGPTGSGKTV+LYTA+N+LN  E NIST EDPVEINL GINQVNVN KAGL F++ALRAFLRQDPDIIMVGEVRDLETAEIA+KAA TGHM+LSTLHTNSA ETLTRL +MG+  +N+ ++V+LVIAQRLARRLC  C+     P
Sbjct:  102 LFVAVSDPTNLEALDEFKFHTGISTEAIVVEETKLVETIEKILSENESSALDDLKDSDLDALDISSDDHEKKDEDSDSDVDDAPIVRFVNKVLLDAINRGASDIHFEPYEKQYRVRLRQDGILQEFAAPPVNLAPRLAARLKVMSRLDISERRVPQDGRFKMKLSRNRAIDFRVSTCPTLFGEKVVMRILDPSSAKIGIDALGYEEAQKVAFLNAIHKPQGMVLVTGPTGSGKTVSLYTAINILNTSEVNISTAEDPVEINLPGINQVNVNPKAGLTFSSALRAFLRQDPDIIMVGEVRDLETAEIAVKAAQTGHMVLSTLHTNSAPETLTRLMNMGIQAFNLATSVTLVIAQRLARRLCTHCKQVAHFP 471          
BLAST of mRNA_M-pyrifera_M_contig72588.17248.1 vs. uniprot
Match: A0A1Q3SVG4_9GAMM (Type IV-A pilus assembly ATPase PilB n=1 Tax=Gammaproteobacteria bacterium 39-13 TaxID=1895767 RepID=A0A1Q3SVG4_9GAMM)

HSP 1 Score: 493 bits (1269), Expect = 3.670e-169
Identity = 251/372 (67.47%), Postives = 309/372 (83.06%), Query Frame = 1
Query:    1 LYVAVSDPTNLAALNEFKFQTGINTHAILIEENKLAKAIEEVLHAKETAVFDDLEDADLETLDISTGDD--EGDQVSEKDAAEDAPIVRFVHKIILDAINSKVSDIHFEPYDRSYRIRYRRDGILYEAAAPPITLAARITARLKVMSRLDISERRIPQDGHFKMTLSKNRTIDFRISTLPTIAGEKVVIRVLDPATAELGVEALGFTEEQREKFAEAIIKPQGMVLVTGPTGSGKTVTLYTALNMLNGMESNISTVEDPVEINLQGINQVNVNNKAGLNFANALRAFLRQDPDIIMVGEVRDLETAEIAIKAAHTGHMLLSTLHTNSAAETLTRLSSMGVPHYNIGSTVSLVIAQRLARRLCATCRAPVDLP 1110
            LYVAVSDPTNL  L+E KF TGI T AI++EENKL + IE++L  K+++   +L+D DL+ LDIS  +D  + D+  + D  +DAPIVRFV+K++LDAIN   SDIHFEPY++SYR+R R+DGIL E A+PP+ LA R+ ARLKVMSRLDISERR+PQDG FKM LS+NR IDFR+ST PT+ GEKVV+R+LDP++A++G++ALG+ + Q+E F  AI +PQGMVLVTGPTGSGKTV+LYTALN+LN  E NIST EDPVEINL GINQVNVN KAGL F++ALRAFLRQDPDIIMVGE+RDLETAEIA+KAA TGHM+LSTLHTNSA ETLTRL +MG+P +N+ ++V+LVIAQRLARRLC  C+ P   P
Sbjct:  104 LYVAVSDPTNLEGLDELKFHTGITTEAIIVEENKLVEVIEKILSDKDSSALSNLQDTDLDDLDISNIEDGEKSDEEGDSDV-DDAPIVRFVNKVLLDAINRGASDIHFEPYEKSYRVRLRQDGILTEFASPPVNLAPRLAARLKVMSRLDISERRVPQDGRFKMKLSRNRAIDFRVSTCPTLFGEKVVMRILDPSSAKMGIDALGYEDHQKEAFLHAIHRPQGMVLVTGPTGSGKTVSLYTALNILNVTEVNISTAEDPVEINLPGINQVNVNPKAGLTFSSALRAFLRQDPDIIMVGEIRDLETAEIAVKAAQTGHMVLSTLHTNSAPETLTRLINMGIPAFNLATSVTLVIAQRLARRLCTHCKQPTQFP 474          
BLAST of mRNA_M-pyrifera_M_contig72588.17248.1 vs. uniprot
Match: A0A523LZB2_9GAMM (Type IV-A pilus assembly ATPase PilB n=2 Tax=Bacteria TaxID=2 RepID=A0A523LZB2_9GAMM)

HSP 1 Score: 491 bits (1263), Expect = 3.080e-168
Identity = 239/371 (64.42%), Postives = 306/371 (82.48%), Query Frame = 1
Query:    1 LYVAVSDPTNLAALNEFKFQTGINTHAILIEENKLAKAIEEVLHAKETAVFDDLEDADLETLDISTGDDEGDQVSEKDAAEDAPIVRFVHKIILDAINSKVSDIHFEPYDRSYRIRYRRDGILYEAAAPPITLAARITARLKVMSRLDISERRIPQDGHFKMTLSKNRTIDFRISTLPTIAGEKVVIRVLDPATAELGVEALGFTEEQREKFAEAIIKPQGMVLVTGPTGSGKTVTLYTALNMLNGMESNISTVEDPVEINLQGINQVNVNNKAGLNFANALRAFLRQDPDIIMVGEVRDLETAEIAIKAAHTGHMLLSTLHTNSAAETLTRLSSMGVPHYNIGSTVSLVIAQRLARRLCATCRAPVDLPK 1113
            L+VAVSDPTNL  L+E KFQ+GINT  IL+EE+KLA  IE+ L  +E   F DL+DA+L+  D+   D+  D       A++ P+VRFV+K++LDAI    SDIHFEPY+R+YR+R+R DGIL++  +PP+ L  R+ ARLKVMS LDISERRIPQDG  KM LSK R IDFR++TLPT+ GEK+V+R+LDP +A++G++ALGF EE++E++ +A+ +PQGM+LVTGPTGSGKTVTLYT LN+LN  E NI+T EDPVEINL+GINQV+VNNK GL FA+ALR+FLRQDPD++MVGE+RD+ETAE+AIKAA TGHM+LSTLHTNSAAETLTRL +MGVP +N+ ++VSL+IAQRLARRLC  CR+ +D+PK
Sbjct:  103 LFVAVSDPTNLQGLDEIKFQSGINTEPILVEEDKLATIIEQFLSQEENDAFGDLDDAELDDFDLEAYDEADDDEDVSSGADETPVVRFVNKMLLDAIKIGASDIHFEPYERTYRVRFRTDGILHQVTSPPVNLGTRLAARLKVMSELDISERRIPQDGRIKMRLSKTRAIDFRVNTLPTLWGEKIVLRILDPQSAKMGIDALGFAEEEKERYMDALHRPQGMILVTGPTGSGKTVTLYTGLNILNTEERNIATAEDPVEINLEGINQVHVNNKVGLTFAHALRSFLRQDPDVVMVGEIRDIETAEVAIKAAQTGHMVLSTLHTNSAAETLTRLRNMGVPAFNVATSVSLIIAQRLARRLCTKCRSVMDVPK 473          
BLAST of mRNA_M-pyrifera_M_contig72588.17248.1 vs. uniprot
Match: A0A2H6JCT0_9BACT (Type II secretion system protein E n=2 Tax=Bacteria TaxID=2 RepID=A0A2H6JCT0_9BACT)

HSP 1 Score: 490 bits (1261), Expect = 6.180e-168
Identity = 250/377 (66.31%), Postives = 313/377 (83.02%), Query Frame = 1
Query:    1 LYVAVSDPTNLAALNEFKFQTGINTHAILIEENKLAKAIEEVLHAKETAVFDDLEDADLETLDI----STGDDEGDQVSEKDAAEDAPIVRFVHKIILDAINSKVSDIHFEPYDRSYRIRYRRDGILYEAAAPPITLAARITARLKVMSRLDISERRIPQDGHFKMTLSKNRTIDFRISTLPTIAGEKVVIRVLDPATAELGVEALGFTEEQREKFAEAIIKPQGMVLVTGPTGSGKTVTLYTALNMLNGMESNISTVEDPVEINLQGINQVNVNNKAGLNFANALRAFLRQDPDIIMVGEVRDLETAEIAIKAAHTGHMLLSTLHTNSAAETLTRLSSMGVPHYNIGSTVSLVIAQRLARRLCATCRAPVDLPKSV 1119
            LYVAVS+PTNL AL + KF TG+ T A+L+EE+KLAKAI+ VL A +T  F +L DADL+ LD     S G++ G +V + +  +D P+VRFV+K++LDAI+   SDIHFEPY+++YR+R+R+DG+LYE A+PP+ LA RI AR+KVMSR+DI+ERRIPQDG  KM LSKNR IDFR+++ PT+ GEK+V+R+LDP TA+LGVEALG+ ++Q++ F E + KP GMVLVTGPTGSGKTV+LYT LN+LN  + NISTVEDPVEIN+ GINQVN+N+K GL FA ALRAFLRQDPD+IMVGEVRDLETAEIAIKAA TGHM+LSTLHTN A +TLTRL +MGVP YNI S+VSL+IAQRLARRLC+ CR PV++P+ V
Sbjct:  105 LYVAVSEPTNLQALADIKFNTGLGTDAVLVEEDKLAKAIDRVLEANDTT-FAELLDADLDNLDFGAEGSDGEETGPEVLDANI-DDTPVVRFVNKVLLDAISKGASDIHFEPYEKTYRVRFRQDGVLYEIASPPVNLANRICARIKVMSRMDIAERRIPQDGRIKMMLSKNRAIDFRVNSCPTLFGEKIVLRILDPNTAKLGVEALGYEDDQKKLFLEVLHKPYGMVLVTGPTGSGKTVSLYTGLNILNTTDRNISTVEDPVEINVPGINQVNMNHKTGLTFAEALRAFLRQDPDVIMVGEVRDLETAEIAIKAAQTGHMVLSTLHTNDAPQTLTRLMNMGVPSYNIASSVSLIIAQRLARRLCSRCRRPVEVPRDV 479          
BLAST of mRNA_M-pyrifera_M_contig72588.17248.1 vs. uniprot
Match: A0A0S2THQ7_9GAMM (Type IV-A pilus assembly ATPase PilB n=1 Tax=Candidatus Tenderia electrophaga TaxID=1748243 RepID=A0A0S2THQ7_9GAMM)

HSP 1 Score: 489 bits (1259), Expect = 8.640e-168
Identity = 244/373 (65.42%), Postives = 313/373 (83.91%), Query Frame = 1
Query:    1 LYVAVSDPTNLAALNEFKFQTGINTHAILIEENKLAKAIEEVLHAKETAVFDDLEDADLETLDISTGDDE--GDQVSEKDAAEDAPIVRFVHKIILDAINSKVSDIHFEPYDRSYRIRYRRDGILYEAAAPPITLAARITARLKVMSRLDISERRIPQDGHFKMTLSKNRTIDFRISTLPTIAGEKVVIRVLDPATAELGVEALGFTEEQREKFAEAIIKPQGMVLVTGPTGSGKTVTLYTALNMLNGMESNISTVEDPVEINLQGINQVNVNNKAGLNFANALRAFLRQDPDIIMVGEVRDLETAEIAIKAAHTGHMLLSTLHTNSAAETLTRLSSMGVPHYNIGSTVSLVIAQRLARRLCATCRAPVDLPK 1113
            LY+AVSDPTNL AL+E KF TG++T A+++E++KLAK IE++L A +T++ + L+D DL+ LDIS G++E  G+ VSEKD  EDAPIVRFV+K++LDAIN   SD+HFEPY+++YR+R+R+DG+L+E AAPPI LA ++ AR+KVMSRLDISE+R+PQDG  KM LS+NR IDFR+ST PT+ GEK+V+R+LDP +A+LG++ALG+  EQ++ + EA+ KP GM+LVTGPTGSGKTV+LYT LN+LN  E NIST EDP EINL G+NQVNVN K GL FA AL+AFLRQDPDIIMVGE+RDLETAEIAIKAA TGHM+LSTLHTN A +TL+R+ +MGV  +NI S VSL+IAQRL RRLC+ C+ P D+P+
Sbjct:   96 LYIAVSDPTNLQALDEIKFATGVSTEAVIVEDDKLAKLIEKILEAMDTSM-EGLDDEDLDDLDISGGEEESSGEDVSEKDT-EDAPIVRFVNKVLLDAINKGASDLHFEPYEKTYRVRFRQDGMLHEVAAPPINLAGKLAARIKVMSRLDISEKRVPQDGRMKMKLSRNRAIDFRVSTCPTLYGEKIVMRILDPTSAQLGIDALGYDPEQKQLYMEALHKPYGMILVTGPTGSGKTVSLYTGLNILNTPERNISTAEDPAEINLPGVNQVNVNPKVGLTFAAALKAFLRQDPDIIMVGEIRDLETAEIAIKAAQTGHMVLSTLHTNDAPQTLSRMMNMGVAPFNIASAVSLIIAQRLGRRLCSHCKQPADIPR 466          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig72588.17248.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E3MKN7_9GAMM5.750e-18673.51Type IV-A pilus assembly ATPase PilB n=1 Tax=Legio... [more]
A0A369CIR4_9GAMM1.340e-17169.81Type IV pilus assembly protein PilB n=1 Tax=Thioal... [more]
A0A525BXC0_9GAMM1.140e-17065.50Type IV-A pilus assembly ATPase PilB n=1 Tax=Gamma... [more]
A0A257SY80_9GAMM1.160e-17066.49Type IV-A pilus assembly ATPase PilB n=1 Tax=Chrom... [more]
A0A2E2TK31_9GAMM1.210e-16968.73Type IV-A pilus assembly ATPase PilB n=1 Tax=Legio... [more]
A0A0Q9YUP1_9COXI3.330e-16967.84Type II secretion system protein E n=1 Tax=Candida... [more]
A0A1Q3SVG4_9GAMM3.670e-16967.47Type IV-A pilus assembly ATPase PilB n=1 Tax=Gamma... [more]
A0A523LZB2_9GAMM3.080e-16864.42Type IV-A pilus assembly ATPase PilB n=2 Tax=Bacte... [more]
A0A2H6JCT0_9BACT6.180e-16866.31Type II secretion system protein E n=2 Tax=Bacteri... [more]
A0A0S2THQ7_9GAMM8.640e-16865.42Type IV-A pilus assembly ATPase PilB n=1 Tax=Candi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig72588contigM-pyrifera_M_contig72588:3..1121 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score493.0
Seed ortholog evalue1.2e-136
Seed eggNOG ortholog207954.MED92_15745
Preferred namepilB
KEGG koko:K02652
KEGG TC3.A.15.2
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
EggNOG OGs1MU7V@1224,1RMBS@1236,1XHC9@135619,COG2804@1,COG2804@2
COG Functional cat.NU
Best tax levelOceanospirillales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02035,ko02044
Exons1
Model size1119
Cds size1119
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816622.3534555-CDS-M-pyrifera_M_contig72588:2..11211622816622.3534555-CDS-M-pyrifera_M_contig72588:2..1121Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig72588 3..1121 +
1692278082.500233-CDS-M-pyrifera_M_contig72588:2..11211692278082.500233-CDS-M-pyrifera_M_contig72588:2..1121Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig72588 3..1121 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig72588.17248.1prot_M-pyrifera_M_contig72588.17248.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig72588 3..1121 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig72588.17248.1

>prot_M-pyrifera_M_contig72588.17248.1 ID=prot_M-pyrifera_M_contig72588.17248.1|Name=mRNA_M-pyrifera_M_contig72588.17248.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=373bp
LYVAVSDPTNLAALNEFKFQTGINTHAILIEENKLAKAIEEVLHAKETAV
FDDLEDADLETLDISTGDDEGDQVSEKDAAEDAPIVRFVHKIILDAINSK
VSDIHFEPYDRSYRIRYRRDGILYEAAAPPITLAARITARLKVMSRLDIS
ERRIPQDGHFKMTLSKNRTIDFRISTLPTIAGEKVVIRVLDPATAELGVE
ALGFTEEQREKFAEAIIKPQGMVLVTGPTGSGKTVTLYTALNMLNGMESN
ISTVEDPVEINLQGINQVNVNNKAGLNFANALRAFLRQDPDIIMVGEVRD
LETAEIAIKAAHTGHMLLSTLHTNSAAETLTRLSSMGVPHYNIGSTVSLV
IAQRLARRLCATCRAPVDLPKSV
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mRNA from alignment at M-pyrifera_M_contig72588:3..1121+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig72588.17248.1 ID=mRNA_M-pyrifera_M_contig72588.17248.1|Name=mRNA_M-pyrifera_M_contig72588.17248.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1119bp|location=Sequence derived from alignment at M-pyrifera_M_contig72588:3..1121+ (Macrocystis pyrifera P11B4 male)
CTTTATGTGGCTGTATCCGATCCGACTAACCTTGCAGCTTTAAATGAATT CAAATTTCAGACCGGCATTAATACGCACGCGATACTGATTGAAGAAAATA AATTGGCAAAAGCCATAGAAGAAGTGTTGCATGCTAAAGAAACTGCTGTA TTTGATGATTTGGAAGATGCAGATTTAGAGACCTTAGATATATCAACAGG TGACGATGAGGGCGATCAGGTTTCTGAAAAGGATGCTGCAGAAGATGCGC CGATTGTACGATTTGTCCATAAAATAATTTTAGATGCGATAAATAGTAAA GTGTCCGATATCCATTTTGAACCATATGATAGATCGTATCGTATTCGTTA TCGCCGTGATGGAATTTTATATGAAGCCGCAGCACCGCCGATTACGCTTG CAGCTCGTATTACAGCACGTTTAAAAGTTATGTCGCGGCTTGATATTTCG GAGCGTAGAATTCCTCAAGATGGTCACTTTAAGATGACATTATCAAAAAA CCGCACCATTGATTTCCGGATTAGCACATTGCCTACTATTGCAGGTGAGA AAGTAGTTATTCGTGTTCTGGATCCAGCGACTGCAGAACTTGGGGTTGAA GCGCTAGGTTTTACTGAGGAGCAACGAGAGAAATTTGCAGAGGCCATTAT CAAACCACAAGGAATGGTACTTGTTACTGGCCCTACGGGTAGTGGTAAAA CAGTGACGCTATATACCGCGCTGAACATGCTTAATGGTATGGAAAGCAAT ATCTCAACGGTTGAGGATCCGGTTGAGATAAATTTACAAGGTATAAACCA AGTAAATGTAAATAATAAAGCCGGACTAAATTTCGCCAATGCCTTACGTG CATTTTTACGTCAAGATCCAGATATCATTATGGTTGGTGAGGTGCGAGAT CTTGAGACGGCTGAAATTGCGATAAAAGCTGCGCACACTGGGCATATGCT TTTGTCTACGTTACACACGAATAGTGCAGCTGAAACATTAACCCGTTTAT CAAGCATGGGCGTCCCACATTACAATATTGGTTCAACGGTATCATTAGTT ATTGCTCAGCGCTTGGCGCGGCGCTTGTGTGCGACATGTCGTGCGCCAGT TGATTTGCCTAAATCCGTT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig72588:3..1121+

>mRNA_M-pyrifera_M_contig72588.17248.1 ID=mRNA_M-pyrifera_M_contig72588.17248.1|Name=mRNA_M-pyrifera_M_contig72588.17248.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2238bp|location=Sequence derived from alignment at M-pyrifera_M_contig72588:3..1121+ (Macrocystis pyrifera P11B4 male)
CTTTATGTGGCTGTATCCGATCCGACTAACCTTGCAGCTTTAAATGAATT
CAAATTTCAGACCGGCATTAATACGCACGCGATACTGATTGAAGAAAATA
AATTGGCAAAAGCCATAGAAGAAGTGTTGCATGCTAAAGAAACTGCTGTA
TTTGATGATTTGGAAGATGCAGATTTAGAGACCTTAGATATATCAACAGG
TGACGATGAGGGCGATCAGGTTTCTGAAAAGGATGCTGCAGAAGATGCGC
CGATTGTACGATTTGTCCATAAAATAATTTTAGATGCGATAAATAGTAAA
GTGTCCGATATCCATTTTGAACCATATGATAGATCGTATCGTATTCGTTA
TCGCCGTGATGGAATTTTATATGAAGCCGCAGCACCGCCGATTACGCTTG
CAGCTCGTATTACAGCACGTTTAAAAGTTATGTCGCGGCTTGATATTTCG
GAGCGTAGAATTCCTCAAGATGGTCACTTTAAGATGACATTATCAAAAAA
CCGCACCATTGATTTCCGGATTAGCACATTGCCTACTATTGCAGGTGAGA
AAGTAGTTATTCGTGTTCTGGATCCAGCGACTGCAGAACTTGGGGTTGAA
GCGCTAGGTTTTACTGAGGAGCAACGAGAGAAATTTGCAGAGGCCATTAT
CAAACCACAAGGAATGGTACTTGTTACTGGCCCTACGGGTAGTGGTAAAA
CAGTGACGCTATATACCGCGCTGAACATGCTTAATGGTATGGAAAGCAAT
ATCTCAACGGTTGAGGATCCGGTTGAGATAAATTTACAAGGTATAAACCA
AGTAAATGTAAATAATAAAGCCGGACTAAATTTCGCCAATGCCTTACGTG
CATTTTTACGTCAAGATCCAGATATCATTATGGTTGGTGAGGTGCGAGAT
CTTGAGACGGCTGAAATTGCGATAAAAGCTGCGCACACTGGGCATATGCT
TTTGTCTACGTTACACACGAATAGTGCAGCTGAAACATTAACCCGTTTAT
CAAGCATGGGCGTCCCACATTACAATATTGGTTCAACGGTATCATTAGTT
ATTGCTCAGCGCTTGGCGCGGCGCTTGTGTGCGACATGTCGTGCGCCAGT
TGATTTGCCTAAATCCGTTCTTTATGTGGCTGTATCCGATCCGACTAACC
TTGCAGCTTTAAATGAATTCAAATTTCAGACCGGCATTAATACGCACGCG
ATACTGATTGAAGAAAATAAATTGGCAAAAGCCATAGAAGAAGTGTTGCA
TGCTAAAGAAACTGCTGTATTTGATGATTTGGAAGATGCAGATTTAGAGA
CCTTAGATATATCAACAGGTGACGATGAGGGCGATCAGGTTTCTGAAAAG
GATGCTGCAGAAGATGCGCCGATTGTACGATTTGTCCATAAAATAATTTT
AGATGCGATAAATAGTAAAGTGTCCGATATCCATTTTGAACCATATGATA
GATCGTATCGTATTCGTTATCGCCGTGATGGAATTTTATATGAAGCCGCA
GCACCGCCGATTACGCTTGCAGCTCGTATTACAGCACGTTTAAAAGTTAT
GTCGCGGCTTGATATTTCGGAGCGTAGAATTCCTCAAGATGGTCACTTTA
AGATGACATTATCAAAAAACCGCACCATTGATTTCCGGATTAGCACATTG
CCTACTATTGCAGGTGAGAAAGTAGTTATTCGTGTTCTGGATCCAGCGAC
TGCAGAACTTGGGGTTGAAGCGCTAGGTTTTACTGAGGAGCAACGAGAGA
AATTTGCAGAGGCCATTATCAAACCACAAGGAATGGTACTTGTTACTGGC
CCTACGGGTAGTGGTAAAACAGTGACGCTATATACCGCGCTGAACATGCT
TAATGGTATGGAAAGCAATATCTCAACGGTTGAGGATCCGGTTGAGATAA
ATTTACAAGGTATAAACCAAGTAAATGTAAATAATAAAGCCGGACTAAAT
TTCGCCAATGCCTTACGTGCATTTTTACGTCAAGATCCAGATATCATTAT
GGTTGGTGAGGTGCGAGATCTTGAGACGGCTGAAATTGCGATAAAAGCTG
CGCACACTGGGCATATGCTTTTGTCTACGTTACACACGAATAGTGCAGCT
GAAACATTAACCCGTTTATCAAGCATGGGCGTCCCACATTACAATATTGG
TTCAACGGTATCATTAGTTATTGCTCAGCGCTTGGCGCGGCGCTTGTGTG
CGACATGTCGTGCGCCAGTTGATTTGCCTAAATCCGTT
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