mRNA_M-pyrifera_M_contig72544.17241.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig72544.17241.1
Unique NamemRNA_M-pyrifera_M_contig72544.17241.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig72544.17241.1 vs. uniprot
Match: A0A5A8DYI4_CAFRO (Uncharacterized protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DYI4_CAFRO)

HSP 1 Score: 231 bits (590), Expect = 1.880e-66
Identity = 138/323 (42.72%), Postives = 195/323 (60.37%), Query Frame = 1
Query:    1 GLDPRLVRACADIGWARPTLVQSRALPLAVGGRDLLLRAQTGSGKTGAYVLAALQGLLGNESGGEGYGGDGGVESGXXXXXXGGKEVEAVILVPSRDLVGQVSDVVDQLTRYCRSSIGGVVRLDGSRGTGAESAALSLGGRVLVSTPGRLVWHLRNTKLDAWSRPGGTQLLSSVRFLVVDEADLCLAFGHGKDVQLIAAALPASVQSVLASATLSPGVDRLRRLVLRQPAVLRLDEAV--TDGKLEQYSLECASGDKHVLVVALTKLGLLVGRTVIFCNQVDEAYKLRLVLAAFGVTAHVWNPKLPASARAIAVSRFHRGEFD 963
            GLD RLV A   +G+  PTLVQS+A+PLA+ GRDLL+RA+TGSGKT AY LAALQ +L               + G      GG     ++LVP+R+L  Q + V + L  +CR  +       GS    +++AAL+    VLV TP R++ HL   KL          +L  +  L+VDEADL L++GHG DV+ +   LP +VQ++L SATL   ++ +RR+VL  PAVLRL++    TDG L Q+ +E    D+++L+ AL KL L+ GR + F N +D  Y+L+L L AFG+ A V N +LPA++RA  + +FH+G FD
Sbjct:   38 GLDRRLVAAVQQMGYVTPTLVQSKAIPLALEGRDLLVRAKTGSGKTAAYALAALQRVLAR------------TQDGAAAASAGGGAPRVLVLVPTRELTAQTASVFEALAFFCRDVVSVASLASGS--DESQAAALARDPDVLVGTPARVMAHLAAGKL----------VLDRLEQLIVDEADLVLSYGHGDDVKGVVRRLPRAVQTLLLSATLPQQLEDMRRVVLHSPAVLRLEDGASSTDGTLTQWVVEVGEEDRYLLLYALVKLRLVSGRAIFFVNDLDSCYRLKLFLEAFGIRAAVLNAELPANSRAHVLRQFHQGVFD 336          
BLAST of mRNA_M-pyrifera_M_contig72544.17241.1 vs. uniprot
Match: A0A812J885_9DINO (Dbp9 protein n=2 Tax=Sar TaxID=2698737 RepID=A0A812J885_9DINO)

HSP 1 Score: 229 bits (584), Expect = 4.240e-64
Identity = 137/322 (42.55%), Postives = 194/322 (60.25%), Query Frame = 1
Query:    4 LDPRLVRACADIGWARPTLVQSRALPLAVGGRDLLLRAQTGSGKTGAYVLAALQGLLGNESGGEGYGGDGGVESGXXXXXXGGKEVEAVILVPSRDLVGQVSDVVDQLTRYCRSSIGGVVRLDGSRGTGAESAALSLGGRVLVSTPGRLVWHLRNTKLDAWSRPGGTQLLSSVRFLVVDEADLCLAFGHGKDVQLIAAALPASVQSVLASATLSPGVDRLRRLVLRQPAVLRLDEAV--TDGKLEQYSLECASGDKHVLVVALTKLGLLVGRTVIFCNQVDEAYKLRLVLAAFGVTAHVWNPKLPASARAIAVSRFHRGEFD 963
            LD RLV A   +G+  PTLVQS+A+PLA+ GRDLL+RA+TGSGKT AY LAALQ +L               + G      GG     ++LVP+R+L  Q + V + L  +CR  +       GS    +++AAL+    VLV TP R++ HL   KL          +L  +  L+VDEADL L++GHG DV+ +   LP +VQ++L SATL   ++ +RR+VL  PAVLRL++    TDG L Q+ +E    D+++L+ AL KL L+ GR + F N +D  Y+L+L L AFG+ A V N +LPA++RA  + +FH+G FD
Sbjct:   42 LDRRLVAAVQQMGYVTPTLVQSKAIPLALEGRDLLVRAKTGSGKTAAYALAALQRVLAR------------TQDGAAAASAGGGAPRVLVLVPTRELTAQTASVFEALAFFCRDVVSVASLASGS--DESQAAALARDPDVLVGTPARVMAHLAAGKL----------VLDRLEQLIVDEADLVLSYGHGDDVKGVVRRLPRAVQTLLLSATLPQQLEDMRRVVLHSPAVLRLEDGASSTDGTLTQWVVEVGEEDRYLLLYALVKLRLVSGRAIFFVNDLDSCYRLKLFLEAFGIRAAVLNAELPANSRAHVLRQFHQGVFD 339          
BLAST of mRNA_M-pyrifera_M_contig72544.17241.1 vs. uniprot
Match: A0A0K2TD92_LEPSM (RNA helicase n=3 Tax=Lepeophtheirus salmonis TaxID=72036 RepID=A0A0K2TD92_LEPSM)

HSP 1 Score: 218 bits (555), Expect = 2.970e-63
Identity = 135/323 (41.80%), Postives = 188/323 (58.20%), Query Frame = 1
Query:    1 GLDPRLVRACADIGWARPTLVQSRALPLAVGGRDLLLRAQTGSGKTGAYVLAALQGLLGNESGGEGYGGDGGVESGXXXXXXGGKEVEAVILVPSRDLVGQVSDVVDQLTRYCRSSIGGVVRLDGSRGTGAESAALSLGGRVLVSTPGRLVWHLRNTKLDAWSRPGGTQLLSSVRFLVVDEADLCLAFGHGKDVQLIAAALPASVQSVLASATLSPGVDRLRRLVLRQPAVLRLDEA--VTDGKLEQYSLECASGDKHVLVVALTKLGLLVGRTVIFCNQVDEAYKLRLVLAAFGVTAHVWNPKLPASARAIAVSRFHRGEFD 963
            GLD RL+ + A++GW+ PTL+QSRA+PL + G+DLL R +TGSGKTGA+ L  LQ LL  ES G                      V A+ L PSR+LV Q+  VV  L  +C  SI  +  L       A  A L     +LVSTPGRL  H++   +D         L SS+  LV+DEADL  +FG+  D++ I   LP+  QSVL SATLS  V++L++LVL  P +L+L+E       +L QY ++    DK +L+ AL KL L+ G+T+IF N VD  YK++L L  FG+   V N +LPA++R   V++F++G +D
Sbjct:   10 GLDDRLLESVAELGWSEPTLIQSRAVPLILEGKDLLARGRTGSGKTGAFALPVLQRLLLGESTGS---------------------VRALFLAPSRELVQQIHGVVRSLLSHCGRSIS-IGNLSMGENLEAGRALLKTPPDLLVSTPGRLWSHIQAKDID---------LSSSLEILVIDEADLTFSFGYESDLKGILINLPSIYQSVLTSATLSEDVNKLKKLVLHNPVILQLEEPQLAEASQLAQYLIKIEEEDKFLLIYALFKLRLIQGKTIIFVNNVDRCYKIKLFLEQFGIPVCVLNSELPAASRCHIVTQFNKGIYD 301          
BLAST of mRNA_M-pyrifera_M_contig72544.17241.1 vs. uniprot
Match: A0A1W0A3G3_9STRA (DEAD/DEAH box RNA helicase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A3G3_9STRA)

HSP 1 Score: 216 bits (549), Expect = 3.690e-61
Identity = 132/321 (41.12%), Postives = 186/321 (57.94%), Query Frame = 1
Query:    1 GLDPRLVRACADIGWARPTLVQSRALPLAVGGRDLLLRAQTGSGKTGAYVLAALQGLLGNESGGEGYGGDGGVESGXXXXXXGGKEVEAVILVPSRDLVGQVSDVVDQLTRYCRSSIGGVVRLDGSRGTGAESAALSLGGRVLVSTPGRLVWHLRNTKLDAWSRPGGTQLLSSVRFLVVDEADLCLAFGHGKDVQLIAAALPASVQSVLASATLSPGVDRLRRLVLRQPAVLRLDEAVTDGKLEQYSLECASGDKHVLVVALTKLGLLVGRTVIFCNQVDEAYKLRLVLAAFGVTAHVWNPKLPASARAIAVSRFHRGEFD 963
            GLD RL +ACA + +   TLVQ   +PLA+ G+DLL+RA+TGSGKT A+ L  LQ +L   S  +G                    ++A+ILVP+++LV Q    + +L  YCR  I  V+ L G +   A+ A L     +L+STP RLV HL           G   L SSV  +V+DEADL L+FG+G+DV+ I  ALP   Q    SATLSP +D L+++VL  PA+++L+E  TDGKL+QY L     DK +LV AL K G++ G+ + F N    AY+++L+   F + A V N KLP ++R   + +F+RG  D
Sbjct:   22 GLDKRLSKACAKLQFVHATLVQKHCIPLALQGKDLLVRARTGSGKTAAFSLPVLQKILAANSNKKG--------------------IKAIILVPTKELVDQTRAHIWELMYYCRDVIS-VLGLSG-QSVSAQQALLRDIPDILISTPSRLVIHLE---------AGNVDLKSSVHTIVMDEADLVLSFGYGEDVKKIFNALPKICQHFFMSATLSPELDALKKVVLHNPAIVKLEEGHTDGKLQQYYLPVPQKDKDLLVYALIKFGVIHGKVIFFVNTTSAAYRIKLLFEQFSIKAAVLNAKLPHNSRQHIIQQFNRGMID 311          
BLAST of mRNA_M-pyrifera_M_contig72544.17241.1 vs. uniprot
Match: D7FNE7_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNE7_ECTSI)

HSP 1 Score: 216 bits (550), Expect = 1.660e-60
Identity = 133/322 (41.30%), Postives = 190/322 (59.01%), Query Frame = 1
Query:    1 GLDPRLVRACADIGWARPTLVQSRALPLAVGGRDLLLRAQTGSGKTGAYVLAALQGLLGNESGGEGYGGDGGVESGXXXXXXGGKEVEAVILVPSRDLVGQVSDVVDQLTRYCRSSIGGVVRLDGSRGTGAESAALSLGGRVLVSTPGRLVWHLRNTKLDAWSRPGGTQLLSSVRFLVVDEADLCLAFGHGKDVQLIAAALPASVQSVLASATLSPGVDRLRRLVLRQPAVLRLDEAVTDGKLEQYSLECAS-GDKHVLVVALTKLGLLVGRTVIFCNQVDEAYKLRLVLAAFGVTAHVWNPKLPASARAIAVSRFHRGEFD 963
            GLD RLV+A A +G+  PTLVQ++ +PLA+ G+DLL+RA+TGSGKT A+ L  LQ +L  +            E G        + V AV+LVP+R+L  Q    + +L  YCR  +  +  +D +    A+ AAL     VLV+TP RLV HL+          G  +L  +V  LVVDEADL L+FG+ +D++ +   LP   Q  L SATLS  ++ L+R+VL  PAVL+L+E   DG+L Q+ L  A  GDK ++V A  KLGLL G+ + F N+ + +Y+L+L L  F V + V N +LP ++R   +  F+RG FD
Sbjct:   53 GLDRRLVKAVAKMGFVYPTLVQNKCIPLALRGKDLLVRARTGSGKTAAFALPLLQKILRRKE----------AEPGLP------RGVRAVVLVPTRELCDQARAHLSELMHYCRDQVSLLALVDDNMA--AQEAALRDKADVLVATPARLVAHLK---------AGNVELKDTVETLVVDEADLVLSFGYSEDIRAVTKRLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGARDGRLSQFYLSLADKGDKFLVVFAFIKLGLLEGKGLFFVNETESSYRLKLFLEQFHVRSAVLNAELPLNSRLHILQEFNRGIFD 347          
BLAST of mRNA_M-pyrifera_M_contig72544.17241.1 vs. uniprot
Match: A0A397AWM6_9STRA (Helicase ATP-binding domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397AWM6_9STRA)

HSP 1 Score: 204 bits (520), Expect = 2.480e-60
Identity = 131/321 (40.81%), Postives = 183/321 (57.01%), Query Frame = 1
Query:    1 GLDPRLVRACADIGWARPTLVQSRALPLAVGGRDLLLRAQTGSGKTGAYVLAALQGLLGNESGGEGYGGDGGVESGXXXXXXGGKEVEAVILVPSRDLVGQVSDVVDQLTRYCRSSIGGVVRLDGSRGTGAESAALSLGGRVLVSTPGRLVWHLRNTKLDAWSRPGGTQLLSSVRFLVVDEADLCLAFGHGKDVQLIAAALPASVQSVLASATLSPGVDRLRRLVLRQPAVLRLDEAVTDGKLEQYSLECASGDKHVLVVALTKLGLLVGRTVIFCNQVDEAYKLRLVLAAFGVTAHVWNPKLPASARAIAVSRFHRGEFD 963
            GLD RL +ACA + +   TLVQ   +PLA+ G+DLL+RA+TGSGKT A+ L  LQ LL   S                      K ++A+ILVP+++LV Q    + +L  YCR  +  V+ L G     A+ A L     +L++TP RLV HL     DA    G   L  SV  +V+DEAD+ L+FG+G DV+ I  ALP   Q    SATLSP +D L++ +L  PAV++L+E  +DGKL QY L  A  DK +L+ AL KLG++ G+ + F N    AY+L+L    F + A V N +LP ++R   + +F+RG  D
Sbjct:   22 GLDKRLSKACAKMQFVHATLVQKHCIPLALQGKDLLVRARTGSGKTAAFCLPVLQKLLAAHS------------------PTTKKSIKALILVPTKELVDQTKAHLWELMYYCRDIVS-VLGLSGQT-VNAQQALLRDLPDILITTPSRLVVHL-----DA----GNVDLKHSVHTVVMDEADMILSFGYGDDVKKIFNALPKICQHFFMSATLSPELDALKKALLHNPAVVKLEEGSSDGKLTQYYLPVAKQDKDLLLYALIKLGIVHGKIIFFVNSTSAAYRLKLFFEQFLIPAAVLNSQLPHNSRQHIIEQFNRGLID 313          
BLAST of mRNA_M-pyrifera_M_contig72544.17241.1 vs. uniprot
Match: I4YI15_WALMC (DEAD-domain-containing protein n=1 Tax=Wallemia mellicola (strain ATCC MYA-4683 / CBS 633.66) TaxID=671144 RepID=I4YI15_WALMC)

HSP 1 Score: 211 bits (536), Expect = 7.770e-60
Identity = 131/325 (40.31%), Postives = 195/325 (60.00%), Query Frame = 1
Query:    4 LDPRLVRACADIGWARPTLVQSRALPLAVGGRDLLLRAQTGSGKTGAYVLAALQGLLGNESGGEGYGGDGGVESGXXXXXXGGKEVEAVILVPSRDLVGQVSDVVDQLTRYCRSSIGGVVRLDGSRGTGAESAALSLGGR--VLVSTPGRLVWHLRNTKLDAWSRPGGTQLLSSVRFLVVDEADLCLAFGHGKDVQLIAAA--LPASVQSVLASATLSPGVDRLRRLVLRQPAVLRLDEAVTDGK-LEQYSLECASGDKHVLVVALTKLGLLVGRTVIFCNQVDEAYKLRLVLAAFGVTAHVWNPKLPASARAIAVSRFHRGEFD 963
            LD RL+RA AD+G+ARPTLVQ++A+PLA+ G+D+L RA+TGSGKT AY+L   Q +L  +  G+                    E  A+ILVP+R+L  QVS  +  L +Y +  +   V L GS GT  +   L L  +  +++STP RL+ HL++  L           LS+++ L +DEADL L++GH  DV+ + +   LP   QS L SAT++  V++LR +VLR PA+L L++   D   L+QY ++C   DK++L   L KL L+ G+ ++F N V+  +KLRL L AFG+ A V N +LP ++R   V  F++G +D
Sbjct:   18 LDKRLLRALADLGFARPTLVQAKAVPLALNGKDILARAKTGSGKTLAYLLPIAQKVLAEKDDGDSK-----------------PETRALILVPTRELSEQVSSHLKSLLKYSQKEVS-QVNLAGS-GTDNKFQRLLLSDKPDIVISTPSRLIGHLQSKSLS----------LSTLKTLAIDEADLILSYGHADDVKALLSGGYLPKIYQSFLMSATMTQDVEKLRGMVLRNPAILTLEDNEDDSSNLKQYYVKCPENDKYLLTYVLLKLKLIKGKVIMFVNNVERGFKLRLFLEAFGIRAVVLNRELPINSRFHIVQEFNKGVYD 313          
BLAST of mRNA_M-pyrifera_M_contig72544.17241.1 vs. uniprot
Match: A0A7S3CYQ8_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3CYQ8_9EUKA)

HSP 1 Score: 212 bits (540), Expect = 7.930e-60
Identity = 127/324 (39.20%), Postives = 195/324 (60.19%), Query Frame = 1
Query:    1 GLDPRLVRACADIGWARPTLVQSRALPLAVGGRDLLLRAQTGSGKTGAYVLAALQGLLGNESGGEGYGGDGGVESGXXXXXXGGKEVEAVILVPSRDLVGQVSDVVDQLTRYCRSSIGGVVRLDGSRGTGAESAAL-SLGGRVLVSTPGRLVWHLRNTKLDAWSRPGGTQLLSSVRFLVVDEADLCLAFGHGKDVQLIAAALPASVQSVLASATLSPGVDRLRRLVLRQPAVLRLDEAVTDGK--LEQYSLECASGDKHVLVVALTKLGLLVGRTVIFCNQVDEAYKLRLVLAAFGVTAHVWNPKLPASARAIAVSRFHRGEFD 963
            GLDPRL +A A +    P+L+Q++++PLA+ G+D+L RA+TGSGKT AY L  +Q LL  +            E+G       G  V A+I+VP+++LV QV  V+ ++T YC   +  V+ L   +  GA+ A L S    ++V TPGR+  HLR   +          L  ++  +V+DEADL L++G+ +DVQ IA ++P + Q+ L SATL+  V++L+ ++L  P  L++++    GK  L QY +EC S  K V+V+A+ KL LLVG+T+ F N +D  +KL+L L  FG+   V N +LP ++RA  +  F+RG FD
Sbjct:   22 GLDPRLRKAVARMNLLHPSLIQAQSIPLALQGKDILARAKTGSGKTLAYALPVVQKLLSLK------------EAGALISSSTG--VSALIVVPTKELVDQVRRVIKEVTHYCHDMVR-VLPLASDQQMGAQKAKLMSARPDIIVGTPGRIAQHLRVKNIS---------LQDTLEIIVIDEADLVLSYGNDEDVQYIAQSMPKTAQAYLMSATLNKDVEKLKNILLNNPIYLKVEDGKDGGKVPLSQYFIECDSEHKFVIVLAMMKLQLLVGKTIFFVNTIDRGFKLKLFLEKFGIRVTVLNSELPQNSRAHIIEEFNRGVFD 321          
BLAST of mRNA_M-pyrifera_M_contig72544.17241.1 vs. uniprot
Match: A0A026VWF3_OOCBI (RNA helicase n=1 Tax=Ooceraea biroi TaxID=2015173 RepID=A0A026VWF3_OOCBI)

HSP 1 Score: 209 bits (532), Expect = 1.060e-59
Identity = 122/322 (37.89%), Postives = 188/322 (58.39%), Query Frame = 1
Query:    4 LDPRLVRACADIGWARPTLVQSRALPLAVGGRDLLLRAQTGSGKTGAYVLAALQGLLGNESGGEGYGGDGGVESGXXXXXXGGKEVEAVILVPSRDLVGQVSDVVDQLTRYCRSSIGGVVRLDGSRGTGAESAALSLGGRVLVSTPGRLVWHLRNTKLDAWSRPGGTQLLSSVRFLVVDEADLCLAFGHGKDVQLIAAALPASVQSVLASATLSPGVDRLRRLVLRQPAVLRLDEA--VTDGKLEQYSLECASGDKHVLVVALTKLGLLVGRTVIFCNQVDEAYKLRLVLAAFGVTAHVWNPKLPASARAIAVSRFHRGEFD 963
            LD R+++A A +GW  PTL+Q +A+PL + G+D+L+RA+TGSGKT A+ +  +Q +L N+   E                   +E++ +I+ PS++L  Q+ +V+  LT  C+  +  V+ +       A+   L     V+VSTPGRL+ HL+          G   L  S+  L++DEADL  +FG+  DV+ +   LP + Q++LASATLS  V  L++LVL  PA+LRL+E    +  +L  Y+L     DK  ++ AL KL L+ G+++IF N VD  YKL+L L  FG+   V N +LPAS+R  AV++F+ G +D
Sbjct:   24 LDDRILKAIAKLGWTEPTLIQEKAIPLLLEGKDVLIRARTGSGKTAAFAVPLIQKILTNKRTQE------------------KQEIKGLIVTPSKELCKQIHEVIMSLTTKCQREVR-VIDISPQTNLNAQKPLLKEMPDVVVSTPGRLLQHLK---------AGNLTLKRSLETLIIDEADLLFSFGYENDVKAVLTHLPTTYQAILASATLSEDVQTLKKLVLHNPAILRLEEPPLASPIQLAHYTLAAEENDKAAILYALLKLHLIRGKSIIFVNTVDRCYKLKLFLEQFGIPTCVLNSELPASSRCRAVTQFNSGTYD 317          
BLAST of mRNA_M-pyrifera_M_contig72544.17241.1 vs. uniprot
Match: W5LJB8_ASTMX (RNA helicase n=6 Tax=Astyanax mexicanus TaxID=7994 RepID=W5LJB8_ASTMX)

HSP 1 Score: 209 bits (531), Expect = 1.810e-59
Identity = 125/323 (38.70%), Postives = 186/323 (57.59%), Query Frame = 1
Query:    1 GLDPRLVRACADIGWARPTLVQSRALPLAVGGRDLLLRAQTGSGKTGAYVLAALQGLLGNESGGEGYGGDGGVESGXXXXXXGGKEVEAVILVPSRDLVGQVSDVVDQLTRYCRSSIGGVVRLDGSRGTGAESAALSLGGRVLVSTPGRLVWHLRNTKLDAWSRPGGTQLLSSVRFLVVDEADLCLAFGHGKDVQLIAAALPASVQSVLASATLSPGVDRLRRLVLRQPAVLRLDEAVTDG--KLEQYSLECASGDKHVLVVALTKLGLLVGRTVIFCNQVDEAYKLRLVLAAFGVTAHVWNPKLPASARAIAVSRFHRGEFD 963
            GLD RL++A AD+GWA+PTL+Q +A+PLA+ G+DLL RA+TGSGKT AY +  +Q +L ++                     G + V A+ILVP+++L  QV  ++ QLT YC   +  V  + G     A+   L     ++V TP R+  H+    L          L SS+  LV+DEADL  +FG   D++ +   LP   Q+ L SATLS  V  L+ LVL  P  L+L+ +   G  +L+QY+++C   +K +L+ AL KLGL+ G+T+IF   +D  YKL+L L  FG+ A V N +LP  +R   +S+F++G +D
Sbjct:   12 GLDDRLLKAIADLGWAQPTLIQEKAVPLALEGKDLLARARTGSGKTAAYAIPVIQQILTSKQ-----------------TVQGEQAVRALILVPTKELGHQVQTMIRQLTAYCAKDVR-VADISGKTELSAQKPILMEKPDIVVGTPSRVQVHISAQNLV---------LHSSLEMLVIDEADLLFSFGFEADLKNLICHLPKIYQAFLMSATLSDDVQALKELVLHNPVTLKLEGSNLPGSAQLQQYTVKCEEDEKFLLIYALLKLGLVRGKTLIFVGMLDRCYKLKLFLEQFGIPACVLNSELPVHSRCHIISQFNQGFYD 307          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig72544.17241.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8DYI4_CAFRO1.880e-6642.72Uncharacterized protein n=4 Tax=Cafeteria roenberg... [more]
A0A812J885_9DINO4.240e-6442.55Dbp9 protein n=2 Tax=Sar TaxID=2698737 RepID=A0A81... [more]
A0A0K2TD92_LEPSM2.970e-6341.80RNA helicase n=3 Tax=Lepeophtheirus salmonis TaxID... [more]
A0A1W0A3G3_9STRA3.690e-6141.12DEAD/DEAH box RNA helicase n=1 Tax=Thraustotheca c... [more]
D7FNE7_ECTSI1.660e-6041.30DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A397AWM6_9STRA2.480e-6040.81Helicase ATP-binding domain-containing protein (Fr... [more]
I4YI15_WALMC7.770e-6040.31DEAD-domain-containing protein n=1 Tax=Wallemia me... [more]
A0A7S3CYQ8_9EUKA7.930e-6039.20Hypothetical protein n=1 Tax=Palpitomonas bilix Ta... [more]
A0A026VWF3_OOCBI1.060e-5937.89RNA helicase n=1 Tax=Ooceraea biroi TaxID=2015173 ... [more]
W5LJB8_ASTMX1.810e-5938.70RNA helicase n=6 Tax=Astyanax mexicanus TaxID=7994... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig72544contigM-pyrifera_M_contig72544:1..1005 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score218.0
Seed ortholog evalue6.4e-54
Seed eggNOG ortholog2880.D7FNE7
Preferred nameDDX56
KEGG koko:K14810
Hectar predicted targeting categoryother localisation
GOsGO:0000463,GO:0000470,GO:0003674,GO:0003676,GO:0003678,GO:0003723,GO:0003724,GO:0003729,GO:0003824,GO:0004003,GO:0004004,GO:0004386,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0007275,GO:0007399,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0008186,GO:0009987,GO:0010467,GO:0010501,GO:0010720,GO:0010975,GO:0010976,GO:0016043,GO:0016070,GO:0016072,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022008,GO:0022613,GO:0030154,GO:0031344,GO:0031346,GO:0031974,GO:0031981,GO:0032392,GO:0032501,GO:0032502,GO:0032508,GO:0033677,GO:0033680,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0042273,GO:0042623,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0046483,GO:0048518,GO:0048522,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050767,GO:0050769,GO:0050789,GO:0050793,GO:0050794,GO:0051094,GO:0051128,GO:0051130,GO:0051239,GO:0051240,GO:0051276,GO:0051960,GO:0051962,GO:0060284,GO:0065007,GO:0070013,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0120035,GO:0140097,GO:0140098,GO:1901360,GO:1901363,GO:2000026
EggNOG free text desc.helicase activity
EggNOG OGsCOG0513@1,KOG0346@2759
EC3.6.4.13
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03009
Exons2
Model size963
Cds size963
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816622.0370302-CDS-M-pyrifera_M_contig72544:0..4971622816622.0370302-CDS-M-pyrifera_M_contig72544:0..497Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig72544 1..497 -
1692278082.3499544-CDS-M-pyrifera_M_contig72544:0..4971692278082.3499544-CDS-M-pyrifera_M_contig72544:0..497Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig72544 1..497 -
1622816622.0491457-CDS-M-pyrifera_M_contig72544:539..10051622816622.0491457-CDS-M-pyrifera_M_contig72544:539..1005Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig72544 540..1005 -
1692278082.3709567-CDS-M-pyrifera_M_contig72544:539..10051692278082.3709567-CDS-M-pyrifera_M_contig72544:539..1005Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig72544 540..1005 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig72544.17241.1prot_M-pyrifera_M_contig72544.17241.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig72544 1..1005 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig72544.17241.1

>prot_M-pyrifera_M_contig72544.17241.1 ID=prot_M-pyrifera_M_contig72544.17241.1|Name=mRNA_M-pyrifera_M_contig72544.17241.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=321bp
GLDPRLVRACADIGWARPTLVQSRALPLAVGGRDLLLRAQTGSGKTGAYV
LAALQGLLGNESGGEGYGGDGGVESGSGGEGGGGKEVEAVILVPSRDLVG
QVSDVVDQLTRYCRSSIGGVVRLDGSRGTGAESAALSLGGRVLVSTPGRL
VWHLRNTKLDAWSRPGGTQLLSSVRFLVVDEADLCLAFGHGKDVQLIAAA
LPASVQSVLASATLSPGVDRLRRLVLRQPAVLRLDEAVTDGKLEQYSLEC
ASGDKHVLVVALTKLGLLVGRTVIFCNQVDEAYKLRLVLAAFGVTAHVWN
PKLPASARAIAVSRFHRGEFD
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mRNA from alignment at M-pyrifera_M_contig72544:1..1005-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig72544.17241.1 ID=mRNA_M-pyrifera_M_contig72544.17241.1|Name=mRNA_M-pyrifera_M_contig72544.17241.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1005bp|location=Sequence derived from alignment at M-pyrifera_M_contig72544:1..1005- (Macrocystis pyrifera P11B4 male)
GGTCTTGATCCTCGCTTGGTACGCGCTTGTGCGGATATTGGATGGGCAAG ACCAACACTTGTACAATCAAGGGCACTTCCACTGGCAGTAGGTGGACGTG ATTTGCTCTTGAGAGCCCAAACTGGGAGTGGAAAGACGGGCGCATATGTT TTGGCAGCATTGCAAGGCTTATTGGGGAATGAGAGTGGGGGGGAGGGATA TGGTGGTGATGGTGGTGTGGAGAGTGGGAGTGGGGGTGAGGGAGGGGGTG GGAAAGAGGTGGAGGCAGTGATTTTGGTGCCTTCTCGTGATTTAGTGGGT CAAGTGAGTGATGTGGTGGATCAATTGACACGCTATTGTAGAAGTAGTAT TGGTGGTGTGGTTCGTTTGGATGGAAGTCGTGGAACAGGTGCAGAAAGTG CAGCATTGTCGTTAGGAGGACGTGTGTTAGTTTCTACCCCTGGTAGGCTT GTATGGCATTTGCGAAGTCGCCATATGAAGGGAAGAGCACCCAAGAGTTG GGAAAAAGACACGAAATTGGATGCTTGGAGCAGGCCTGGGGGCACGCAAT TGCTCTCTTCTGTTCGTTTCTTGGTAGTGGACGAAGCTGACTTGTGTTTG GCTTTTGGACATGGAAAAGACGTACAGTTGATTGCTGCAGCCTTGCCTGC GTCGGTCCAATCTGTTCTTGCATCTGCTACACTCTCTCCAGGAGTTGACA GGTTGCGGAGATTGGTATTGCGGCAGCCAGCTGTGTTGCGTCTTGATGAA GCTGTGACTGATGGGAAATTGGAGCAATATTCATTGGAGTGTGCAAGTGG TGATAAACACGTTTTAGTAGTTGCTCTCACCAAACTAGGTCTACTTGTTG GCAGGACTGTGATCTTCTGCAACCAAGTAGATGAAGCTTACAAGTTGCGA CTCGTCCTTGCAGCATTTGGCGTCACAGCACATGTTTGGAACCCAAAACT TCCAGCCTCTGCACGTGCAATTGCTGTCTCAAGATTCCACAGAGGAGAAT TCGAC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig72544:1..1005-

>mRNA_M-pyrifera_M_contig72544.17241.1 ID=mRNA_M-pyrifera_M_contig72544.17241.1|Name=mRNA_M-pyrifera_M_contig72544.17241.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1926bp|location=Sequence derived from alignment at M-pyrifera_M_contig72544:1..1005- (Macrocystis pyrifera P11B4 male)
GGTCTTGATCCTCGCTTGGTACGCGCTTGTGCGGATATTGGATGGGCAAG
ACCAACACTTGTACAATCAAGGGCACTTCCACTGGCAGTAGGTGGACGTG
ATTTGCTCTTGAGAGCCCAAACTGGGAGTGGAAAGACGGGCGCATATGTT
TTGGCAGCATTGCAAGGCTTATTGGGGAATGAGAGTGGGGGGGAGGGATA
TGGTGGTGATGGTGGTGTGGAGAGTGGGAGTGGGGGTGAGGGAGGGGGTG
GGAAAGAGGTGGAGGCAGTGATTTTGGTGCCTTCTCGTGATTTAGTGGGT
CAAGTGAGTGATGTGGTGGATCAATTGACACGCTATTGTAGAAGTAGTAT
TGGTGGTGTGGTTCGTTTGGATGGAAGTCGTGGAACAGGTGCAGAAAGTG
CAGCATTGTCGTTAGGAGGACGTGTGTTAGTTTCTACCCCTGGTAGGCTT
GTATGGCATTTGCGAAGGTCTTGATCCTCGCTTGGTACGCGCTTGTGCGG
ATATTGGATGGGCAAGACCAACACTTGTACAATCAAGGGCACTTCCACTG
GCAGTAGGTGGACGTGATTTGCTCTTGAGAGCCCAAACTGGGAGTGGAAA
GACGGGCGCATATGTTTTGGCAGCATTGCAAGGCTTATTGGGGAATGAGA
GTGGGGGGGAGGGATATGGTGGTGATGGTGGTGTGGAGAGTGGGAGTGGG
GGTGAGGGAGGGGGTGGGAAAGAGGTGGAGGCAGTGATTTTGGTGCCTTC
TCGTGATTTAGTGGGTCAAGTGAGTGATGTGGTGGATCAATTGACACGCT
ATTGTAGAAGTAGTATTGGTGGTGTGGTTCGTTTGGATGGAAGTCGTGGA
ACAGGTGCAGAAAGTGCAGCATTGTCGTTAGGAGGACGTGTGTTAGTTTC
TACCCCTGGTAGGCTTGTATGGCATTTGCGAAACACGAAATTGGATGCTT
GGAGCAGGCCTGGGGGCACGCAATTGCTCTCTTCTGTTCGTTTCTTGGTA
GTGGACGAAGCTGACTTGTGTTTGGCTTTTGGACATGGAAAAGACGTACA
GTTGATTGCTGCAGCCTTGCCTGCGTCGGTCCAATCTGTTCTTGCATCTG
CTACACTCTCTCCAGGAGTTGACAGGTTGCGGAGATTGGTATTGCGGCAG
CCAGCTGTGTTGCGTCTTGATGAAGCTGTGACTGATGGGAAATTGGAGCA
ATATTCATTGGAGTGTGCAAGTGGTGATAAACACGTTTTAGTAGTTGCTC
TCACCAAACTAGGTCTACTTGTTGGCAGGACTGTGATCTTCTGCAACCAA
GTAGATGAAGCTTACAAGTTGCGACTCGTCCTTGCAGCATTTGGCGTCAC
AGCACATGTTTGGAACCCAAAACTTCCAGCCTCTGCACGTGCAATTGCTG
TCTCAAGATTCCACAGAGGAGAATTCGACACACGAAATTGGATGCTTGGA
GCAGGCCTGGGGGCACGCAATTGCTCTCTTCTGTTCGTTTCTTGGTAGTG
GACGAAGCTGACTTGTGTTTGGCTTTTGGACATGGAAAAGACGTACAGTT
GATTGCTGCAGCCTTGCCTGCGTCGGTCCAATCTGTTCTTGCATCTGCTA
CACTCTCTCCAGGAGTTGACAGGTTGCGGAGATTGGTATTGCGGCAGCCA
GCTGTGTTGCGTCTTGATGAAGCTGTGACTGATGGGAAATTGGAGCAATA
TTCATTGGAGTGTGCAAGTGGTGATAAACACGTTTTAGTAGTTGCTCTCA
CCAAACTAGGTCTACTTGTTGGCAGGACTGTGATCTTCTGCAACCAAGTA
GATGAAGCTTACAAGTTGCGACTCGTCCTTGCAGCATTTGGCGTCACAGC
ACATGTTTGGAACCCAAAACTTCCAGCCTCTGCACGTGCAATTGCTGTCT
CAAGATTCCACAGAGGAGAATTCGAC
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