mRNA_M-pyrifera_M_contig7250.17233.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig7250.17233.1
Unique NamemRNA_M-pyrifera_M_contig7250.17233.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig7250.17233.1 vs. uniprot
Match: D7FIT2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIT2_ECTSI)

HSP 1 Score: 174 bits (441), Expect = 1.360e-52
Identity = 89/100 (89.00%), Postives = 96/100 (96.00%), Query Frame = 2
Query:    2 ALEATKKYGATSPEARLAWDTYEEVAAADNSIATRVTLDEDCDIDHAKVCEEYQDQMKELEEILSAGPAAMNISVEQLAKQNMILIEENSRLKASLSTYK 301
            AL+ATK++GATSPEARLAWDTYEEVAAADN+IATR TLDEDCD+ +  VCEEYQDQMKELEEIL+AGPAAMNISVEQLAKQNMILIEENSRLKASLSTYK
Sbjct:   56 ALKATKEFGATSPEARLAWDTYEEVAAADNTIATRATLDEDCDVTNENVCEEYQDQMKELEEILAAGPAAMNISVEQLAKQNMILIEENSRLKASLSTYK 155          
BLAST of mRNA_M-pyrifera_M_contig7250.17233.1 vs. uniprot
Match: A0A835Z6A4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6A4_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 1.650e-22
Identity = 52/100 (52.00%), Postives = 67/100 (67.00%), Query Frame = 2
Query:    2 ALEATKKYGATSPEARLAWDTYEEVAAADNSIATRVTLDEDCDIDHAKVCEEYQDQMKELEEILSAGPAAMNISVEQLAKQNMILIEENSRLKASLSTYK 301
            AL A KKYGA SPEA  AWD YEE+AA+DN+ A R  LDE CD + ++ C +++ QM EL+ I+  G A   ++ + L  QN  LIEEN RL+ SLS YK
Sbjct:   14 ALAAVKKYGAKSPEAANAWDEYEEIAASDNTAAFRPGLDEGCDTEASQECSDFEAQMAELQAIIEKGEA---VTTDALVAQNKKLIEENQRLRRSLSAYK 110          
BLAST of mRNA_M-pyrifera_M_contig7250.17233.1 vs. uniprot
Match: A0A6V2QHI9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2QHI9_HETAK)

HSP 1 Score: 70.1 bits (170), Expect = 4.100e-11
Identity = 46/102 (45.10%), Postives = 61/102 (59.80%), Query Frame = 2
Query:    2 ALEATKKYGATSPEARLAWDTYEEV-AAADNSIATRVTLDEDCDI-DHAKVCEEYQDQMKELEEILSAGPAAMNISVEQLAKQNMILIEENSRLKASLSTYK 301
            ALEATKK+GATSPEARLAW+  EE+ AAA  + A +  LD +CD+ D  +VC+E+   M+ L E+ + G A    S   LA +N  L  EN  +   L   K
Sbjct:   49 ALEATKKFGATSPEARLAWEAVEEMNAAARPANAMKKNLDVECDVSDGGEVCKEFNMHMERLAELTAEGSATAAAS---LANKNKELFAENRLIMKELGELK 147          
BLAST of mRNA_M-pyrifera_M_contig7250.17233.1 vs. uniprot
Match: B7FTL9_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FTL9_PHATC)

HSP 1 Score: 67.4 bits (163), Expect = 5.810e-10
Identity = 36/68 (52.94%), Postives = 52/68 (76.47%), Query Frame = 2
Query:    2 ALEATKKYGATSPEARLAWDTYEEVAAADNSIATRVTLDEDCDIDHAKV---CEEYQDQMKELEEILS 196
            AL+A+K+YGATSPEAR+AWD  EE+ A D+S AT+ +L ++CDID  KV   C EY  +++EL ++L+
Sbjct:  148 ALQASKQYGATSPEARVAWDAVEEMRANDDSPATQGSLADECDIDEDKVSAACLEYGSKIEELNKLLA 215          
BLAST of mRNA_M-pyrifera_M_contig7250.17233.1 vs. uniprot
Match: A0A448YV90_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YV90_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 1.480e-9
Identity = 34/81 (41.98%), Postives = 55/81 (67.90%), Query Frame = 2
Query:    2 ALEATKKYGATSPEARLAWDTYEEVAAADNSIATRVTLDEDCDIDH-AKVCEEYQDQMKELEEILSAGPAAMNISVEQLAK 241
            AL  + KYGATS EARLAW+  EE+ A+DNS+A+   L+++CD++  ++ C EY   ++EL+E+L A    ++   E ++K
Sbjct:   46 ALALSNKYGATSKEARLAWEAVEEINASDNSVASMGNLNDECDVEVVSQDCLEYNAALEELQELLQANQPKISALSEDISK 126          
BLAST of mRNA_M-pyrifera_M_contig7250.17233.1 vs. uniprot
Match: A0A1Z5JBS1_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JBS1_FISSO)

HSP 1 Score: 63.5 bits (153), Expect = 6.480e-9
Identity = 31/68 (45.59%), Postives = 51/68 (75.00%), Query Frame = 2
Query:    2 ALEATKKYGATSPEARLAWDTYEEVAAADNSIATRVTLDEDCDI--DHAKVCEEYQDQMKELEEILSA 199
            A++A+K YG TSPEAR+AW+  E++AA+DNS A++ TLDE+CD   ++ ++C EY  + ++L E + +
Sbjct:   46 AVKASKTYGPTSPEARVAWEVVEDIAASDNSAASKGTLDEECDWMDENNRLCMEYDTKKEKLAEAIKS 113          
BLAST of mRNA_M-pyrifera_M_contig7250.17233.1 vs. uniprot
Match: A0A6U4HQZ8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4HQZ8_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 2.270e-8
Identity = 41/105 (39.05%), Postives = 62/105 (59.05%), Query Frame = 2
Query:    2 ALEATKKYGATSPEARLAWDTYEEVAAADNSIATRVT----LDEDCDIDHAKVCEEYQDQMKELEEILSAGPAAMNISVEQLAKQNMI-LIEENSRLKASLSTYK 301
            AL+A+KK+GATS EAR AWD  EE+ AA+   A+       L E C ++ +++CE+YQ Q++EL  IL +  A  N   E  A   ++ L+ EN+ L   + T +
Sbjct:   58 ALDASKKFGATSSEARTAWDIVEEMRAAEADQASNPAIVPNLAELCSLEESELCEQYQQQIEELNAILRSAQA--NGDSEGAAADVIVRLVAENAVLAKQIETMQ 160          
BLAST of mRNA_M-pyrifera_M_contig7250.17233.1 vs. uniprot
Match: A0A7S4I4P3_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I4P3_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 1.510e-6
Identity = 28/66 (42.42%), Postives = 50/66 (75.76%), Query Frame = 2
Query:    2 ALEATKKYGATSPEARLAWDTYEEVAAADNSIATRVTLDEDCDIDHAKVCEEYQDQMKELEEILSA 199
            A EAT+++G +SP+A+LAW++ EE+A++D S AT+ TLDE+C ++  + CE     ++EL+++L +
Sbjct:  166 AKEATEEFGISSPQAKLAWESLEEIASSDLSEATKGTLDEECLVETIEACE----AIEELQQVLDS 227          
BLAST of mRNA_M-pyrifera_M_contig7250.17233.1 vs. uniprot
Match: A0A7S1V082_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V082_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 1.380e-5
Identity = 31/65 (47.69%), Postives = 43/65 (66.15%), Query Frame = 2
Query:    2 ALEATKKYGATSPEARLAWDTYEEVAAADNSIATRVTLDEDCDIDHAK-VCEEYQDQMKELEEIL 193
            A  AT K+GATSPEA LAW+ YEE+A++    +  V LDE+CDI+  + +CE     M EL+ +L
Sbjct:  164 ARTATSKFGATSPEAALAWEAYEEIASSGLQNSMGVRLDEECDIESGQDICE----AMDELQRVL 224          
BLAST of mRNA_M-pyrifera_M_contig7250.17233.1 vs. uniprot
Match: A0A7S2V3N2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3N2_9STRA)

HSP 1 Score: 51.6 bits (122), Expect = 4.670e-5
Identity = 35/92 (38.04%), Postives = 51/92 (55.43%), Query Frame = 2
Query:    2 ALEATKKYGATSPEARLAWDTYEEVAAADNSIATRVTLDEDCDIDHAKVCEEYQDQMKELEEILSAGPAAMNISVEQLAKQNMILIEENSRL 277
            AL AT  +G  S +A+L W+T+E++A+A    AT   LDE C   H + C+EY+    EL E++  G      +V  L  +N  L  ENS+L
Sbjct:   49 ALRATATFGVHSVQAKLEWETFEDIASAGTFAATLPALDEQC-FSHLQ-CQEYEAASLELSELI--GQELDESAVAALVAENKQLQLENSKL 136          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7250.17233.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D7FIT2_ECTSI1.360e-5289.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z6A4_9STRA1.650e-2252.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6V2QHI9_HETAK4.100e-1145.10Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
B7FTL9_PHATC5.810e-1052.94Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A448YV90_9STRA1.480e-941.98Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A1Z5JBS1_FISSO6.480e-945.59Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A6U4HQZ8_9STRA2.270e-839.05Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S4I4P3_9STRA1.510e-642.42Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S1V082_9STRA1.380e-547.69Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S2V3N2_9STRA4.670e-538.04Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7250contigM-pyrifera_M_contig7250:4865..9820 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons3
Model size566
Cds size291
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7250.17233.1prot_M-pyrifera_M_contig7250.17233.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig7250 4865..9547 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816621.695392-CDS-M-pyrifera_M_contig7250:4864..49941622816621.695392-CDS-M-pyrifera_M_contig7250:4864..4994Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7250 4865..4994 +
1692278082.1737254-CDS-M-pyrifera_M_contig7250:4864..49941692278082.1737254-CDS-M-pyrifera_M_contig7250:4864..4994Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7250 4865..4994 +
1622816621.7083795-CDS-M-pyrifera_M_contig7250:6741..68551622816621.7083795-CDS-M-pyrifera_M_contig7250:6741..6855Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7250 6742..6855 +
1692278082.191323-CDS-M-pyrifera_M_contig7250:6741..68551692278082.191323-CDS-M-pyrifera_M_contig7250:6741..6855Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7250 6742..6855 +
1622816621.7221208-CDS-M-pyrifera_M_contig7250:9500..95471622816621.7221208-CDS-M-pyrifera_M_contig7250:9500..9547Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7250 9501..9547 +
1692278082.2067034-CDS-M-pyrifera_M_contig7250:9500..95471692278082.2067034-CDS-M-pyrifera_M_contig7250:9500..9547Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7250 9501..9547 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816621.7370524-UTR-M-pyrifera_M_contig7250:9547..98201622816621.7370524-UTR-M-pyrifera_M_contig7250:9547..9820Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig7250 9548..9820 +
1692278082.2203214-UTR-M-pyrifera_M_contig7250:9547..98201692278082.2203214-UTR-M-pyrifera_M_contig7250:9547..9820Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig7250 9548..9820 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig7250.17233.1

>prot_M-pyrifera_M_contig7250.17233.1 ID=prot_M-pyrifera_M_contig7250.17233.1|Name=mRNA_M-pyrifera_M_contig7250.17233.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=97bp
GPRGDEEVRRDFSRGSARVGHLRGGRGGGQLDRHTGHPRRGLRHRPREGL
RGIPGPDEGVGGDLVGRTRCHEHQRRAAGEAEHDPDRREQPPEGQP*
back to top

mRNA from alignment at M-pyrifera_M_contig7250:4865..9820+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig7250.17233.1 ID=mRNA_M-pyrifera_M_contig7250.17233.1|Name=mRNA_M-pyrifera_M_contig7250.17233.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4956bp|location=Sequence derived from alignment at M-pyrifera_M_contig7250:4865..9820+ (Macrocystis pyrifera P11B4 male)
GGCCCTCGAGGCGACGAAGAAGTACGGCGCGACTTCTCCCGAGGCTCGGC TCGCGTGGGACACCTACGAGGAGGTCGCGGCGGCGGACAACTCGATCGCC ACACGGGTCACCCTCGACGAGGACTGCGACGTAAGTGTCATCTTCTGGTT ATATGTTTTGCGATAATTTGGTGATGAGGATGCCATACGGTATTACAAGG TATATGACACCTACTCGCGCAAGTCCCACACTACCCGGAAGAGATGACTC CCGGGTGGCTATCTCCACCGCACCTGCTCCTCTCGGGGGTCAGGTCGGGT CAACGTGCCCAAACTCCAGGGGTAACAGCAGCGTGTTCTGATGTTGCAAC GAGAGCTATGGGCTAAATTGACACACGACACGAAATTGGAACTTGGAATT GTGGTGACCTTAAGCTTGATTTTTACCAATCCGCCGGAGGATTAAAAAGA AAAAAAGAAAGAAAAATACAGAGCACAATGCCCGACAGCAGTTGAAGAAA CTCTTCTTTTGCCCAACATTTTCGGGCGTATATTCCGTCGTTTCCCTCCA ACGATTTGAGCATACCTGCTGTAGTCCAGCTTCTTGTTGCACAACCAATG TGTCACTTACTTTAGGTCCTGGGACATATTCCATTTATTGGTAGGACTGC AGTCCCGTTTGAGGGACAAGGGGCGTCATTTGTACGGCTCTCCACGGGTC ATGACCCTATCCGCGGGTCGGGTCAGGAAGTTTTTGAAATCGCACGGGTC GGGTCGGGTCACCGCTTTCATCCGACCCGACCGACCTGACCCGCGAAGTT TGACGTGACCCCTGAAGACCCCTGTTTTTTTGGGATGGGGATGCCATACC GTATGATACGATACCTACGGACAACACGCAATATAGAGATAGCGTACCGA ACACCTAGTAAGAATCAGGAAAGCATGTCCAGCTTTGATTTCTTGATTGA AGATGTGTGCGTGACGCACTAAATTCAAGTGTATCGATTCCCGAATGTGT CGCTTTGCTGCACATCTCGGCCTGGCTTTCTTATTGCTCGTTTTCTCATT TTAAACCTGGTAGTTTGTATGTATTGTGTAGGTGTCTTGTACTGCTTTTA GCACACGACGTTCGAGCTGATTTTTTCTCGAGAACGCGATTTGGATCTTG TCATTTTCGGGGCTGTGCCAAATGTCGAAATGCCGGTGACGTGCGCTAGA TAATAAGGTGCATGTCTGTTTTATTTCTGTTTTTGTTATTTTCTTGAGTA GTTCTGGATGCTCTGCAGGACGCGGAAAGTAGAGGGCTGTTTAGGCAGCG AACTTGAAAGAATGACGAAAATAAAATTACGGTACTCTACGATCACGCTA GACCCATGATACCTTGTACCTGGTACCGAGGTGGTGTAGTGTTTCCAGCG GCAGGTCAACCCCTTTTAATGCTGCAGTCCCGTTTAAGGGACAAACCAGT CAAATTCTAAGTAGTTCGTCCTCTAACGGGACTGCGGTCCTAAAAGGTTT TGAAAGTGTGTCATAACTCGGACAGATCGGGTAGATCATTCCCGCCTAAT GGTCTAGATCCTTCAGTGCAGCTAGCTAGATAGATACATCCCTGATCTGC ATGATCTGTATGATCTACAGTAGCTCACAATGCCGGGTGGGGGCTGTATT TCCTGCATGATCTATAGGACATGTTTCCTCGGTTGGATCTGTACTATACA GGTCCTGCACAGCATCTCATCTCATGACGGCGGGTTAGGAGCTAGATGAT CTATCTGATAACCAGATAGATCGTGCGTATCTGTTCCACGAGTAAGTTGC TTCGATCGTGCGTTTTGAGGTGATAACTCTCTCCTGATTCCCGCCCTGCT GCGTTACTTTTTTATTTTATTTCACAGATCGACCACGCGAAGGTTTGCGA GGAATACCAGGACCAGATGAAGGAGTTGGAGGAGATCTTGTCGGCAGGAC CCGCTGCCATGAACATCAGCGTCGAGCAGCTGGCGAAGCAGGTGCGGTTG GTTTTCGTGGAGAGAATAGATGCATGCTACGGTAGGGTATGTTTGCATCG CTTCTTTTTTCTGAGGGTCAATTGTTTTGTTTTTTTTTCCTCGCTTGAGG AAAGTGTTTCCCCCCCCCAAAAAAAACAAGTTTTTGTGAGATGAGGAAAA GAGAGACCAAAAACTGACCTCCAAGATCAAATTGAATTAACCTTCCCGTA GCCATGGTACTAAATCACGTTTAAAATTGTGTCCATTAACACGAACGGTG TTGCAAGTATAAGGTATGCCATATCGGATACTTCTTCGGCCGAGGACCGT TCGGATATTGATGTGGAGACCAAGCCGTGTTTACGTGTTCGGCCAGAATG GTGAAGCAGTACCTCTTTCGTAGCACTCGTCAGTGAAAATATATGTAAAT ACTTCGTGTATATACATATATCGGTTTTGTTGTCAACGTTAATTTCAATA TGTCGATCGATTAGCGCCGCAGTTCTGTCGCATCGCTCATACTCTAGGCT TTCGAAATACGTACATTCACCATGTAAGAGGATAGTGCCGCATAGCACGT AGAAAATATTTCAATATGAGGATGCGAGCAATGTAAGTAGCACGTAAGGT ATTAGTAATAGTAACAAAATGCACCCGTTAGGCCGATTTTCCAAGCGGAT TTTATGATTTTATGGCCCACGGGAAGAGCGAATGGAATGAATGGCATGTG GAAAAATTTCGGTAAGGCATTGTCATGGCCGCGTTTTTCGTCATGCGTGT GTTCCCTTGTTCTGAAATAAATAGCTCGGACAGCACCAGGGGGTGTGTTG TTCTGCGTGTTTTACGGTATTTACTTGGTACCTGGTTTCATCAAAGGGTT TTGTGTTGGCGCTGTCATGATATGAAGGCATGCAAACACGGCTTCGCAGC GCACGTGCATGCCTTGGTGCGGCAGTAGGTTGGGATCATACTGTATGAAC AGTACGCTGTGCCTGGTACGACGTAGGAAGTTTTTTGGCTGTACGAAGGC GTGTCTCGGTCCGGACTGCTGTACTAAACAGGCTCAGCTGACTCTTTTGG TGGCAGCAGTCGCTTTTTTTTCGATGTCGTTAGTGTGTCGGCTGTCCAAT TCCATGCATGCCAGCCCGATCGATAAAGAGAAACCCCGACTCGATTCAAA ACTGATGTTCGTTAAAACGGGCCCTAGTAACTACGATGGTAGAGGCCCGT TTTGACGCCCCCATTTACGGCCCGTTTTAACCTATTACGGGGGACCGTAG TAAGTAGGACCAACTATTGTTGGTAAAAATGGGTAAATTTATACCTAGTA CGTTTTTATGTATGTCATAGGTCCTATCAACTATGGACCCCCGTAATAAC ACGTTGGAATCGAATCGGGGTTTTTTTCGCCTTTTGAATCAAACAAACAT ACGAGACGCGCGTTGTGTCAAGCTGAAAAGGGTTCTTACGCATCGCGCGG GTTGGGTCAAGAAGTTTTCGGAACCTCACTGTCGAGTGGGGGTCTTTTAA ACCTCACGGATCGGGTCGAGCCACTCTCACTCGACCCGGCCTCACCCACG AGGTTTGACCGGACCCGACCTCACCCACGAGGTTTGACCGGGCCCGACTT CATCCACGAGGTTTGACCCGACCCGACCTGACCCGTGAATAGAAATTCTG GATTCACTACACTGTACGAAGTTGGTGTGTAGTAAATAGGACCTACGGTA CGCGCAAAAACCTATATATGTAGGTAGTTTTACTAACAATATTTGGTACT ATTTACTATGGTCCCCCGTAATAGTACCGTAGTAAGAAATCAAGCCTGGA TCAACTTGCCCATCTCGTACTCTTTCAGGGTTGCGAGTTCCGTTTTGAGG ACAAGCTGCTTAGAATGTTGTAGTGGTTTGTCCCCGAAACCCCCGGAAAC GGACTGCAGTTATGAAGGGGATCACAGTGCTGCCGTATGGTATTGCACGC AACTTGGTATCCCACCTGGGTGAAGTTCAGCGCCGATTTTCTTCGCAGCC AGGAAGGAGGCCCTTCGTACTATTAATAGTTTGTTTGTTGCCTTGCAGTA AGTAGTCAGTTGACCATTGATCGCGCATCCCTTTCGAGACTAAGCTTGTT GTTGTCAATAGTGTCCTTCGTAGCATACTTGGTATGTACCTGGTAGCAGC GAACTCGTTACTTTCAAAACTTCAAGAATTTGTAGACAACCCTAACCGTA AAAACCTACACACCCGGTAGAACGCATCACACCAGGCTCGGCAAAGATGA GCTTCGAGTTATAATTTTTCGATCCCACAGCTCCGATTTTTATTTTTCGT CATGGTAAGCATGCCTTAAGGGGGGCGTGCACAACGAAAACGACGGCTTT TGGGGGAAATCTCGTCGAAATATTTTCGTAGACGCGCCTCTTGTCGTCCT TTGCATTCTCCCTCCCCCTTGTCGTCATAATCGACTCTGAAAAATTGTTT TAAAGGGGTATGTATGTTATCTCGGGTGTCAGCATATCATATCGGCAGCT TAGGACGTAGATGATCTGGCTATTGGTATTTCCTGCACTATGCTGGTGGT AGAAAGTGACGTTTCTGAGGCTTCTCCCTCCCTCCCTCCCTCCCTCCCTC CCTCCCTCGGTCATTTTGTTGCCTTGCTCATTGCAGAACATGATCCTGAT CGAAGAGAACAGCCGCCTGAAGGCCAGCCTTAGCACCTACAAGTAACCAA CAACTTCCTTTCCTGTTTCGACTGGGAAAATACCTCAAAAACTGTCAACC TCCTTGAAAACTGCAACCATTTTTTGGGGCATTTGTTCTACTTGGAATTA GTGTGGGACAATTTTACTTGCAGTAGTGAGAGAGTTAAGGCTCGCGCATC GAGTAGATGCCTTCGGCAAGAAATGGTTGCCGGATGACCGATGACACTTT TTTCGGCACGTTCGGGGAAGTATTATTTTATTTCGCACCTAAAAAAAACA GCCCCT
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig7250:4865..9820+

>mRNA_M-pyrifera_M_contig7250.17233.1 ID=mRNA_M-pyrifera_M_contig7250.17233.1|Name=mRNA_M-pyrifera_M_contig7250.17233.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=582bp|location=Sequence derived from alignment at M-pyrifera_M_contig7250:4865..9820+ (Macrocystis pyrifera P11B4 male)
GGCCCTCGAGGCGACGAAGAAGTACGGCGCGACTTCTCCCGAGGCTCGGC
TCGCGTGGGACACCTACGAGGAGGTCGCGGCGGCGGACAACTCGATCGCC
ACACGGGTCACCCTCGACGAGGACTGCGACGGCCCTCGAGGCGACGAAGA
AGTACGGCGCGACTTCTCCCGAGGCTCGGCTCGCGTGGGACACCTACGAG
GAGGTCGCGGCGGCGGACAACTCGATCGCCACACGGGTCACCCTCGACGA
GGACTGCGACATCGACCACGCGAAGGTTTGCGAGGAATACCAGGACCAGA
TGAAGGAGTTGGAGGAGATCTTGTCGGCAGGACCCGCTGCCATGAACATC
AGCGTCGAGCAGCTGGCGAAGCAGATCGACCACGCGAAGGTTTGCGAGGA
ATACCAGGACCAGATGAAGGAGTTGGAGGAGATCTTGTCGGCAGGACCCG
CTGCCATGAACATCAGCGTCGAGCAGCTGGCGAAGCAGAACATGATCCTG
ATCGAAGAGAACAGCCGCCTGAAGGCCAGCCTTAGAACATGATCCTGATC
GAAGAGAACAGCCGCCTGAAGGCCAGCCTTAG
back to top