mRNA_M-pyrifera_M_contig72468.17227.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig72468.17227.1 vs. uniprot
Match: A0A2E7KE17_9PLAN (Uncharacterized protein n=8 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KE17_9PLAN) HSP 1 Score: 266 bits (680), Expect = 1.360e-79 Identity = 171/173 (98.84%), Postives = 173/173 (100.00%), Query Frame = 1 Query: 7 MTRKMKFQFFLISVLSVTFVCSDSVHSVLLAQEPSSDSEDRGGFGGRRXXXXXXXXXSRFGGRXXXXXXXXXXXXGFGXXGFSGFRGAIGFMVTREEIQKELQLTEDQIKQLQEAAQSMRPSRESMEPFMNRMRDAQTDEERTKVREEMSASFEKQRTEGEAKLWGLLNEKQS 525 MTRKMKFQFFLISVLSVTFVCSD+VHSVLLAQEPSSDSEDRGGFGGRRXXXXXXXXXSRFGGRXXXXXXXXXXXXGFGXXGFSGFRGAIGFMVTREEIQKELQLTEDQIKQLQEAAQSMRPSRESMEPFMNRMRDAQTDEERTKVREEMSASFEKQRTEGEAKLWGLLNEKQ+ Sbjct: 1 MTRKMKFQFFLISVLSVTFVCSDTVHSVLLAQEPSSDSEDRGGFGGRRXXXXXXXXXSRFGGRXXXXXXXXXXXXGFGXXGFSGFRGAIGFMVTREEIQKELQLTEDQIKQLQEAAQSMRPSRESMEPFMNRMRDAQTDEERTKVREEMSASFEKQRTEGEAKLWGLLNEKQA 173
BLAST of mRNA_M-pyrifera_M_contig72468.17227.1 vs. uniprot
Match: A0A518ADK3_9PLAN (Bacterial type II/III secretion system short domain protein n=6 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518ADK3_9PLAN) HSP 1 Score: 218 bits (554), Expect = 2.150e-62 Identity = 149/173 (86.13%), Postives = 155/173 (89.60%), Query Frame = 1 Query: 7 MTRKMKFQFFLISVLSVTFVCSDSVHSVLLAQEPSSDSEDRGGFGGRRXXXXXXXXXSRFGGRXXXXXXXXXXXXGFGXXGFSGFRGAIGFMVTREEIQKELQLTEDQIKQLQEAAQSMRPSRESMEPFMNRMRDAQTDEERTKVREEMSASFEKQRTEGEAKLWGLLNEKQS 525 M R MKF VL V +CS SVHSV+ AQEPS S DRGGFGGRRXXXXXXXXXSRFGGRXXXXXXXXXXXXGFGXX FSGFRGAIGFMV REEIQKELQLTE+QIKQLQEAAQ+MRPSRESMEPFMNRMRDAQTDEERTKVREEMSASFEKQRTEGEAKLWG+LNEKQ+ Sbjct: 1 MNRNMKFHLSFFFVLFVALICSGSVHSVIQAQEPSP-SGDRGGFGGRRXXXXXXXXXSRFGGRXXXXXXXXXXXXGFGXXXFSGFRGAIGFMVMREEIQKELQLTEEQIKQLQEAAQAMRPSRESMEPFMNRMRDAQTDEERTKVREEMSASFEKQRTEGEAKLWGVLNEKQT 172
BLAST of mRNA_M-pyrifera_M_contig72468.17227.1 vs. uniprot
Match: A0A3D3R8G4_9PLAN (Uncharacterized protein n=7 Tax=Gimesia TaxID=1649453 RepID=A0A3D3R8G4_9PLAN) HSP 1 Score: 134 bits (337), Expect = 3.420e-33 Identity = 106/181 (58.56%), Postives = 120/181 (66.30%), Query Frame = 1 Query: 7 MTRKMKFQFFLISVLSVTFVCSDSVHSVLLAQEPSSDSEDRGGFGGRRXXXXXXXXXSRFGGRXXXXXXXXXXXXGF--------GXXGFSGFRGAIGFMVTREEIQKELQLTEDQIKQLQEAAQSMRPSRESMEPFMNRMRDAQTDEERTKVREEMSASFEKQRTEGEAKLWGLLNEKQS 525 M + +KFQFF L CSD + S + AQE SE+RG GGRR FGG XXXXXXXXXX X F X + ++ REE+QKELQLT DQIKQL+EAA SMRP+RESMEPFM RMRDAQTDEERTKVREEMSASFEKQR+EGEAK+ LLNEKQ+ Sbjct: 1 MMKNIKFQFFFTIALMGLIPCSDILMSSVQAQE----SENRGDRGGRRDRGG-------FGGXXXXXXXXXXXGXXFXXXXXXXXSRXXXXXXXXXLVSLINREEVQKELQLTSDQIKQLEEAAASMRPTRESMEPFMTRMRDAQTDEERTKVREEMSASFEKQRSEGEAKVMSLLNEKQA 170
BLAST of mRNA_M-pyrifera_M_contig72468.17227.1 vs. uniprot
Match: A0A517RMA4_9PLAN (Bacterial type II/III secretion system short domain protein n=2 Tax=Gimesia TaxID=1649453 RepID=A0A517RMA4_9PLAN) HSP 1 Score: 134 bits (336), Expect = 4.660e-33 Identity = 101/168 (60.12%), Postives = 114/168 (67.86%), Query Frame = 1 Query: 46 VLSVTFVCSDSVHSVLLAQEPSSDSEDRGGFGGRRXXXXXXXXXSRFGGRXXXXXXXXXXXXGFGXXGFSGFRG--------AIGFMVTREEIQKELQLTEDQIKQLQEAAQSMRPSRESMEPFMNRMRDAQTDEERTKVREEMSASFEKQRTEGEAKLWGLLNEKQS 525 +L+ T VC++SVH L AQEPS D DR XXXXXXXXX R GFGXX IGF+V RE++QKELQLTE+QIKQLQEAAQ +RPSRE MEPFM RMR+AQTDEERTKVREEM A+F+KQRTEGEAKL GLLNEKQ+ Sbjct: 14 LLTGTLVCTESVHHSLQAQEPS-DQPDRSXXXXXXXXXXXXXXXXXXXPRG-----------GFGXXXXXXXXXXXXXXXXXGIGFLVIREDVQKELQLTEEQIKQLQEAAQGLRPSREMMEPFMTRMREAQTDEERTKVREEMGAAFQKQRTEGEAKLMGLLNEKQA 169
BLAST of mRNA_M-pyrifera_M_contig72468.17227.1 vs. uniprot
Match: A0A517WSU6_9PLAN (Bacterial type II/III secretion system short domain protein n=3 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517WSU6_9PLAN) HSP 1 Score: 125 bits (314), Expect = 4.200e-30 Identity = 89/160 (55.62%), Postives = 104/160 (65.00%), Query Frame = 1 Query: 46 VLSVTFVCSDSVHSVLLAQEPSSDSEDRGGFGGRRXXXXXXXXXSRFGGRXXXXXXXXXXXXGFGXXGFSGFRGAIGFMVTREEIQKELQLTEDQIKQLQEAAQSMRPSRESMEPFMNRMRDAQTDEERTKVREEMSASFEKQRTEGEAKLWGLLNEKQS 525 +L VCSDSVH L AQ+P DRGGFG XXXXXXXXX IG +V RE +QKELQLTEDQIK+L E AQ +RP+RE +EPFMNRMR+AQTDEER+K+REEM + FEK+R EGEAKL+GLLNEKQ+ Sbjct: 14 ILVALIVCSDSVHQSLQAQQPGG-RPDRGGFGXXXXXXXXXXXXXXX---------------------XXXXXXDIGSLVAREAVQKELQLTEDQIKKLSEVAQELRPNRELVEPFMNRMREAQTDEERSKIREEMGSVFEKRRKEGEAKLFGLLNEKQA 151
BLAST of mRNA_M-pyrifera_M_contig72468.17227.1 vs. uniprot
Match: A0A355G6I7_9PLAN (Secretin_N domain-containing protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A355G6I7_9PLAN) HSP 1 Score: 124 bits (312), Expect = 7.540e-30 Identity = 67/82 (81.71%), Postives = 75/82 (91.46%), Query Frame = 1 Query: 280 MVTREEIQKELQLTEDQIKQLQEAAQSMRPSRESMEPFMNRMRDAQTDEERTKVREEMSASFEKQRTEGEAKLWGLLNEKQS 525 +V REE+QKELQLT DQIKQL+EAA SMRP+RESMEPFM R+R+AQTDEERTKVREEM ASFEKQRTEGEAK+ LLNEKQ+ Sbjct: 91 LVNREEVQKELQLTPDQIKQLEEAAASMRPTRESMEPFMTRLREAQTDEERTKVREEMGASFEKQRTEGEAKMMSLLNEKQA 172
BLAST of mRNA_M-pyrifera_M_contig72468.17227.1 vs. uniprot
Match: A0A2E2C7J4_9PLAN (Uncharacterized protein n=5 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2C7J4_9PLAN) HSP 1 Score: 124 bits (312), Expect = 7.810e-30 Identity = 67/82 (81.71%), Postives = 75/82 (91.46%), Query Frame = 1 Query: 280 MVTREEIQKELQLTEDQIKQLQEAAQSMRPSRESMEPFMNRMRDAQTDEERTKVREEMSASFEKQRTEGEAKLWGLLNEKQS 525 +V REE+QKELQLT DQIKQL+EAA SMRP+RESMEPFM R+R+AQTDEERTKVREEM ASFEKQRTEGEAK+ LLNEKQ+ Sbjct: 88 LVNREEVQKELQLTPDQIKQLEEAAASMRPTRESMEPFMTRLREAQTDEERTKVREEMGASFEKQRTEGEAKMMSLLNEKQA 169
BLAST of mRNA_M-pyrifera_M_contig72468.17227.1 vs. uniprot
Match: A0A7W0M7U3_9PLAN (Spy/CpxP family protein refolding chaperone n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7W0M7U3_9PLAN) HSP 1 Score: 53.5 bits (127), Expect = 4.150e-5 Identity = 29/89 (32.58%), Postives = 59/89 (66.29%), Query Frame = 1 Query: 256 GFRGAIGFMVTREEIQKELQLTEDQIKQLQEAAQSMRPSRESMEPFMNRMRDAQTDEERTKVREEMSASFEKQRTEGEAKLWGLLNEKQ 522 G RG + ++ R+E+++ L LTE+Q ++ E RP R +++P+ ++++A+T+E++ VREE++A+ K R + EA + +L+ +Q Sbjct: 34 GERGGLLSLLRRDEVKESLGLTEEQAAKITELEAQSRPGRGALDPYFEKLKNAETEEQKNVVREELNAAAAKFRQDAEAGVRAVLSPEQ 122 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig72468.17227.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig72468.17227.1 >prot_M-pyrifera_M_contig72468.17227.1 ID=prot_M-pyrifera_M_contig72468.17227.1|Name=mRNA_M-pyrifera_M_contig72468.17227.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=173bp MTRKMKFQFFLISVLSVTFVCSDSVHSVLLAQEPSSDSEDRGGFGGRRDRback to top mRNA from alignment at M-pyrifera_M_contig72468:1..525- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig72468.17227.1 ID=mRNA_M-pyrifera_M_contig72468.17227.1|Name=mRNA_M-pyrifera_M_contig72468.17227.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=525bp|location=Sequence derived from alignment at M-pyrifera_M_contig72468:1..525- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig72468:1..525- >mRNA_M-pyrifera_M_contig72468.17227.1 ID=mRNA_M-pyrifera_M_contig72468.17227.1|Name=mRNA_M-pyrifera_M_contig72468.17227.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1038bp|location=Sequence derived from alignment at M-pyrifera_M_contig72468:1..525- (Macrocystis pyrifera P11B4 male)back to top |