mRNA_M-pyrifera_M_contig72398.17214.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig72398.17214.1 vs. uniprot
Match: A0A0M0J637_9EUKA (Hydroxymethylglutaryl-CoA synthase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J637_9EUKA) HSP 1 Score: 207 bits (526), Expect = 5.760e-62 Identity = 106/161 (65.84%), Postives = 128/161 (79.50%), Query Frame = 1 Query: 10 VGILAMDAYTPQRFIAQELLETDPG---KITIGLGQQEMAFTDDREDVISIMMTALDRLLVNTGVSPEEIGRLEIGTESLVDKSKSAKTTIQEYVFGPGHHNIEGCTSINACYGGTAAVLNSAAWVESSAWDGRYAVVVAGDVAVYEEGPARPTGGCGAVA 483 VGILAM+AY PQ + Q LE G K TIGLGQ+ + + DDREDV SI++TAL RL+ N G+ P++IGRLE+GTE+L+DKSKS KTT+ ++FGP + ++EG TS NACYGGTAA+LNS AWVESSAWDGRYAVVV GD+AVY GPARPTGG GAVA Sbjct: 18 VGILAMEAYFPQNCLQQTALEEADGCKGKYTIGLGQESLGYFDDREDVASILLTALARLMENYGIEPQQIGRLEVGTETLIDKSKSVKTTLLAHLFGP-NADVEGVTSTNACYGGTAALLNSVAWVESSAWDGRYAVVVCGDIAVYAPGPARPTGGGGAVA 177
BLAST of mRNA_M-pyrifera_M_contig72398.17214.1 vs. uniprot
Match: F0XWE9_AURAN (Hydroxymethylglutaryl-CoA synthase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWE9_AURAN) HSP 1 Score: 205 bits (522), Expect = 1.330e-61 Identity = 103/161 (63.98%), Postives = 129/161 (80.12%), Query Frame = 1 Query: 10 VGILAMDAYTPQRFIAQELLETDPG---KITIGLGQQEMAFTDDREDVISIMMTALDRLLVNTGVSPEEIGRLEIGTESLVDKSKSAKTTIQEYVFGPGHHNIEGCTSINACYGGTAAVLNSAAWVESSAWDGRYAVVVAGDVAVYEEGPARPTGGCGAVA 483 VGILAM+ Y PQ ++AQ LE G K +GLGQ+ MAF DDRED+ S+++TA RLL GV+P ++GRLE+GTE+LVDKSKS KTT+ + +FG H ++EG +S+NACYGGTAA+LN+ AWVESSAWDG+YAVVV GD+AVYE GPARP+GGCGAVA Sbjct: 10 VGILAMEWYAPQTYVAQTSLEEQDGCGGKYVVGLGQEAMAFVDDREDIGSVLLTACRRLLTGFGVAPADVGRLEVGTETLVDKSKSVKTTLLQ-LFGD-HRDVEGVSSVNACYGGTAALLNACAWVESSAWDGKYAVVVCGDIAVYEPGPARPSGGCGAVA 168
BLAST of mRNA_M-pyrifera_M_contig72398.17214.1 vs. uniprot
Match: A0A7S2NK23_9EUKA (Hydroxymethylglutaryl-CoA synthase n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2NK23_9EUKA) HSP 1 Score: 206 bits (525), Expect = 2.040e-61 Identity = 105/161 (65.22%), Postives = 128/161 (79.50%), Query Frame = 1 Query: 10 VGILAMDAYTPQRFIAQELLETDPG---KITIGLGQQEMAFTDDREDVISIMMTALDRLLVNTGVSPEEIGRLEIGTESLVDKSKSAKTTIQEYVFGPGHHNIEGCTSINACYGGTAAVLNSAAWVESSAWDGRYAVVVAGDVAVYEEGPARPTGGCGAVA 483 VGILAM+AY PQ ++ Q LE G K T+GLGQ+++A+ DDREDV S+++ AL RL+ G+ PE++GRLE+GTE+LVDKSKS KTT+ +F G +IEG TSINACYGGTAA+LNS AWVESSAWDGRYA+VV GD+AVYE GPARPTGG GAVA Sbjct: 61 VGILAMEAYFPQNYLPQTALEAQDGCAGKYTVGLGQEKLAYFDDREDVASVLLNALVRLMEGYGIQPEQVGRLEVGTETLVDKSKSVKTTLLAQLFS-GCADIEGVTSINACYGGTAALLNSVAWVESSAWDGRYAIVVCGDIAVYEAGPARPTGGGGAVA 220
BLAST of mRNA_M-pyrifera_M_contig72398.17214.1 vs. uniprot
Match: A0A8J2WE60_9STRA (Hydroxymethylglutaryl-CoA synthase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WE60_9STRA) HSP 1 Score: 202 bits (514), Expect = 1.240e-60 Identity = 101/161 (62.73%), Postives = 127/161 (78.88%), Query Frame = 1 Query: 10 VGILAMDAYTPQRFIAQELLETDPG---KITIGLGQQEMAFTDDREDVISIMMTALDRLLVNTGVSPEEIGRLEIGTESLVDKSKSAKTTIQEYVFGPGHHNIEGCTSINACYGGTAAVLNSAAWVESSAWDGRYAVVVAGDVAVYEEGPARPTGGCGAVA 483 VGI+AM+ Y+PQ ++AQ LE G K T+GLGQQ+MAF D REDV S+++TA RLL N + P+ +GRLE+GTE+L+DKSKS KT++ G+ N+EG TS+NACYGGTAA+ NS AWVESSAWDGRYA+VV GD+AVYE+GPARP+GGCGAVA Sbjct: 13 VGIVAMEWYSPQTYVAQTSLEKQDGCDGKYTVGLGQQQMAFADSREDVGSLLLTACARLLENYKIDPKSVGRLEVGTETLIDKSKSVKTSLLRLF--EGNPNMEGVTSVNACYGGTAALFNSVAWVESSAWDGRYAIVVCGDIAVYEKGPARPSGGCGAVA 171
BLAST of mRNA_M-pyrifera_M_contig72398.17214.1 vs. uniprot
Match: A0A7S4B600_CHRCT (Hydroxymethylglutaryl-CoA synthase (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B600_CHRCT) HSP 1 Score: 202 bits (515), Expect = 1.380e-60 Identity = 103/161 (63.98%), Postives = 127/161 (78.88%), Query Frame = 1 Query: 10 VGILAMDAYTPQRFIAQELLETDPG---KITIGLGQQEMAFTDDREDVISIMMTALDRLLVNTGVSPEEIGRLEIGTESLVDKSKSAKTTIQEYVFGPGHHNIEGCTSINACYGGTAAVLNSAAWVESSAWDGRYAVVVAGDVAVYEEGPARPTGGCGAVA 483 VGILA + Y+P ++ Q LLET G K T+GLGQ MAF DDREDV S+M+ AL LL N ++P ++GRLE+GTE+L+DK+KS KTT+ E++F G+ ++EG TSINACYGGTAA+LNS AWVESSAWDGRYA+VV GD+AVY GPARPTGG GAVA Sbjct: 19 VGILAAEWYSPATYVPQTLLETADGCEGKYTVGLGQNAMAFCDDREDVGSLMLNALANLLTNYSINPRDVGRLEVGTETLIDKAKSIKTTLIEHLF-EGNSDVEGVTSINACYGGTAALLNSVAWVESSAWDGRYALVVMGDIAVYAPGPARPTGGAGAVA 178
BLAST of mRNA_M-pyrifera_M_contig72398.17214.1 vs. uniprot
Match: A0A7S1C4V7_9STRA (Hydroxymethylglutaryl-CoA synthase (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C4V7_9STRA) HSP 1 Score: 202 bits (515), Expect = 6.700e-60 Identity = 103/162 (63.58%), Postives = 122/162 (75.31%), Query Frame = 1 Query: 10 VGILAMDAYTPQRFIAQELLE----TDPGKITIGLGQQEMAFTDDREDVISIMMTALDRLLVNTGVSPEEIGRLEIGTESLVDKSKSAKTTIQEYVFGPGHHNIEGCTSINACYGGTAAVLNSAAWVESSAWDGRYAVVVAGDVAVYEEGPARPTGGCGAVA 483 VGILA +AY P RF++Q LE GK TIGLGQ+ +AF DDRED+ SI M A+ LL G+ ++GRLE+GTESLVDKSKSAKT I ++FG N+EG TSINACYGGTAA+LNS AWVESS W G+YA+ V D+AVYE+GPARPTGGCGAVA Sbjct: 75 VGILACEAYVPNRFVSQAALEEADGVGAGKYTIGLGQERLAFVDDREDINSICMNAVQNLLTKYGIQAHQVGRLEVGTESLVDKSKSAKTVIAGHLFGDDR-NLEGATSINACYGGTAALLNSVAWVESSDWTGKYAIYVTADIAVYEKGPARPTGGCGAVA 235
BLAST of mRNA_M-pyrifera_M_contig72398.17214.1 vs. uniprot
Match: A0A6H5JG45_9PHAE (Hydroxymethylglutaryl-CoA synthase (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG45_9PHAE) HSP 1 Score: 194 bits (494), Expect = 3.620e-59 Identity = 98/162 (60.49%), Postives = 120/162 (74.07%), Query Frame = 1 Query: 10 VGILAMDAYTPQRFIAQELLET----DPGKITIGLGQQEMAFTDDREDVISIMMTALDRLLVNTGVSPEEIGRLEIGTESLVDKSKSAKTTIQEYVFGPGHHNIEGCTSINACYGGTAAVLNSAAWVESSAWDGRYAVVVAGDVAVYEEGPARPTGGCGAVA 483 VGILA D Y P F++QE LE GK TIGLGQ+ MAFT DRED+ S+ +T + +LL V + IGR+E+GTE+L+DKSKS KT + G+ +IEG T++NACYGGTAA+LN+ AWVESS WDGRYA+VVA D+AVY EGPARPTGGCGAVA Sbjct: 50 VGILAADVYFPSTFVSQEDLEVANSVSAGKYTIGLGQEAMAFTGDREDINSMCLTVVAQLLEKYDVPKDRIGRIEVGTETLIDKSKSTKTVLMSLFEDSGNDDIEGVTTVNACYGGTAALLNAVAWVESSGWDGRYAIVVAADIAVYAEGPARPTGGCGAVA 211
BLAST of mRNA_M-pyrifera_M_contig72398.17214.1 vs. uniprot
Match: R1CY43_EMIHU (Hydroxymethylglutaryl-CoA synthase n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CY43_EMIHU) HSP 1 Score: 199 bits (507), Expect = 4.910e-59 Identity = 101/160 (63.12%), Postives = 121/160 (75.62%), Query Frame = 1 Query: 13 GILAMDAYTPQRFIAQELLETDPG---KITIGLGQQEMAFTDDREDVISIMMTALDRLLVNTGVSPEEIGRLEIGTESLVDKSKSAKTTIQEYVFGPGHHNIEGCTSINACYGGTAAVLNSAAWVESSAWDGRYAVVVAGDVAVYEEGPARPTGGCGAVA 483 GILAM+ Y PQR++ Q LE G K T+GLGQ +AF DDRED+ S+++TA RLL GV IGRLE+GTE+L+DKSKS KTT+ +FG H ++EG +S NACYGGTAA+LNS AWVESSAWDGRYA+VV GD+AVY GPARPTGG GAVA Sbjct: 9 GILAMECYFPQRYVPQTALEEADGCAGKYTVGLGQTALAFFDDREDIASVLLTACARLLERYGVPASAIGRLEVGTETLLDKSKSVKTTLMAQLFGAEHSDVEGVSSTNACYGGTAALLNSVAWVESSAWDGRYALVVCGDIAVYAPGPARPTGGGGAVA 168
BLAST of mRNA_M-pyrifera_M_contig72398.17214.1 vs. uniprot
Match: A0A7S3HLA9_9STRA (Hydroxymethylglutaryl-CoA synthase (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HLA9_9STRA) HSP 1 Score: 193 bits (490), Expect = 1.120e-58 Identity = 98/162 (60.49%), Postives = 119/162 (73.46%), Query Frame = 1 Query: 10 VGILAMDAYTPQRFIAQELLET----DPGKITIGLGQQEMAFTDDREDVISIMMTALDRLLVNTGVSPEEIGRLEIGTESLVDKSKSAKTTIQEYVFGPGHHNIEGCTSINACYGGTAAVLNSAAWVESSAWDGRYAVVVAGDVAVYEEGPARPTGGCGAVA 483 VGILAM+ Y P ++ Q LE GK TIGLGQ+ MAFT D+ED+ S+ +T + LL +SP EIGRLEIGTESLVDKSKS KT + + G+ NIEG T +NACYGGTA++LN+ +WV+SSAWDGRYA+VVA D+AVY GPAR TGGCGAVA Sbjct: 9 VGILAMEVYFPSSYVTQTDLEVAFGVSAGKYTIGLGQESMAFTGDQEDINSVALTVVHNLLEKYSISPSEIGRLEIGTESLVDKSKSTKTVLMKLFEESGNTNIEGATVVNACYGGTASLLNALSWVDSSAWDGRYAIVVAADIAVYAAGPARATGGCGAVA 170
BLAST of mRNA_M-pyrifera_M_contig72398.17214.1 vs. uniprot
Match: A0A7S2SJ81_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SJ81_9STRA) HSP 1 Score: 187 bits (476), Expect = 4.010e-58 Identity = 98/159 (61.64%), Postives = 117/159 (73.58%), Query Frame = 1 Query: 10 VGILAMDAYTPQRFIAQELLETDPG---KITIGLGQQEMAFTDDREDVISIMMTALDRLLVNTGVSPEEIGRLEIGTESLVDKSKSAKTTIQEYVFGPGHHNIEGCTSINACYGGTAAVLNSAAWVESSAWDGRYAVVVAGDVAVYEEGPARPTGGCGA 477 VGILAM+AY P F+ Q LE G K T GLGQ +AF DRED+ S++MTA+ RLL GV P +GRLE+GTESL+DKSKS KT++ +FG + +IEG TS NACYGGTAA+LNS AWV+S WDGR A+ VAGD+AVYE GPARPT GCGA Sbjct: 11 VGILAMEAYFPTCFVDQTALEAQDGCAGKYTKGLGQNRLAFVTDREDIASVLMTAVQRLLERFGVDPAHVGRLEVGTESLIDKSKSVKTSLMR-LFGE-NKDIEGVTSTNACYGGTAALLNSVAWVQSEDWDGRLAICVAGDIAVYEAGPARPTSGCGA 167 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig72398.17214.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig72398.17214.1 >prot_M-pyrifera_M_contig72398.17214.1 ID=prot_M-pyrifera_M_contig72398.17214.1|Name=mRNA_M-pyrifera_M_contig72398.17214.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=153bp MDAYTPQRFIAQELLETDPGKITIGLGQQEMAFTDDREDVISIMMTALDRback to top mRNA from alignment at M-pyrifera_M_contig72398:562..1128+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig72398.17214.1 ID=mRNA_M-pyrifera_M_contig72398.17214.1|Name=mRNA_M-pyrifera_M_contig72398.17214.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=567bp|location=Sequence derived from alignment at M-pyrifera_M_contig72398:562..1128+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig72398:562..1128+ >mRNA_M-pyrifera_M_contig72398.17214.1 ID=mRNA_M-pyrifera_M_contig72398.17214.1|Name=mRNA_M-pyrifera_M_contig72398.17214.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=918bp|location=Sequence derived from alignment at M-pyrifera_M_contig72398:562..1128+ (Macrocystis pyrifera P11B4 male)back to top |