mRNA_M-pyrifera_M_contig72392.17210.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig72392.17210.1 vs. uniprot
Match: A0A5A8ELZ9_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8ELZ9_CAFRO) HSP 1 Score: 170 bits (430), Expect = 1.860e-47 Identity = 74/119 (62.18%), Postives = 83/119 (69.75%), Query Frame = 1 Query: 1 EKVFSNGQPNLFCNHYYWIPDPEQRWPDKINVCHTSRRSESKFYCSKAFYCNWTNNPFLIHKEWWIKEYVESRFKQWTRVDPFQDLESYMNWEPDSWNSLPWIVAQGDGLFKHVDRNNF 357 E VF QPNLFCNHYYWIP+PE+RWPDKI C + YCSKA YCNWTNNP ++ WW EYV+ RF DP+ LE YMNWE SWN P++VAQGDGLFKHVDRNNF Sbjct: 507 EAVFGR-QPNLFCNHYYWIPNPEERWPDKIWRC---MEKPTVMYCSKAKYCNWTNNPLIMATSWWRDEYVKKRFPAAKSHDPYNGLEPYMNWERGSWNDEPFVVAQGDGLFKHVDRNNF 621
BLAST of mRNA_M-pyrifera_M_contig72392.17210.1 vs. uniprot
Match: A0A7S4I188_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4I188_9EUKA) HSP 1 Score: 139 bits (351), Expect = 4.690e-40 Identity = 60/114 (52.63%), Postives = 76/114 (66.67%), Query Frame = 1 Query: 22 QPNLFCNHYYWIPDPEQRWPDKINVCHTSRRSESK-FYCSKAFYCNWTNNPFLIHKEWWIKEYVESRFKQWTRVDPFQDLESYMNWEPDSWNSLPWIVAQGDGLFKHVDRNNFG 360 QPNL CN Y++I P QRWP +VC SE+ FYC + +CNWTNNPFLI+K WW + YV +F Q +P +LE +MNW+ +WN WIVA+GDG+FKH D NNFG Sbjct: 43 QPNLLCNFYHFIDRPAQRWPQHFDVC-----SENPLFYCVDSEFCNWTNNPFLINKHWWFENYVH-KFAQINSAEPDFNLEGFMNWQQGAWNDRHWIVAEGDGMFKHCDANNFG 150
BLAST of mRNA_M-pyrifera_M_contig72392.17210.1 vs. uniprot
Match: A0A482RKJ7_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RKJ7_9ARCH) HSP 1 Score: 123 bits (309), Expect = 2.450e-34 Identity = 53/82 (64.63%), Postives = 64/82 (78.05%), Query Frame = 1 Query: 118 ESKFYCSKAFYCNWTNNPFLIHKEWWIKEYVESRFKQWTRVDPFQDLESYMNWEPDSWNSLPWIVAQGDGLFKHVDRNNFGF 363 E + CS ++YCNWTNNP L WW +EYV SRF ++TR DP+ DLESYMNWEP+SWN+ +IVAQGDGLFKH DR NFG+ Sbjct: 20 EPEMQCSDSYYCNWTNNPQLWKVSWWNEEYV-SRFDKFTRNDPWYDLESYMNWEPNSWNTRKFIVAQGDGLFKHSDRGNFGY 100
BLAST of mRNA_M-pyrifera_M_contig72392.17210.1 vs. uniprot
Match: A0A1Y1I871_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I871_KLENI) HSP 1 Score: 96.7 bits (239), Expect = 7.530e-21 Identity = 45/136 (33.09%), Postives = 70/136 (51.47%), Query Frame = 1 Query: 1 EKVFSNGQPNLFCNHYYWIPDPE---QRWPDKINVCHTS-----------RRSESKFYCSKAFYCNWTNNPFLIHKEWWIKEY---VESRFKQWTRVDPFQ---DLESYMNWEPDSWNSLPWIVAQGDGLFKHVDR 348 E N QPNL C ++W+P+ E ++ + C R+++ ++CS+A +C WTNNP+L+ +EWW + Y V++ QW Q D+E W P WN+ W +A G+GLF HV+R Sbjct: 364 EMEILNNQPNLMCCVHHWLPNAELASPKYQPYVYKCPALPKLNGDKHVIFERNQNDWWCSRAEHCLWTNNPYLLRREWWDRHYKPMVDALIDQWDGWTEHQRALDIEYLFGWNPAFWNAKAWTIAVGEGLFTHVER 499
BLAST of mRNA_M-pyrifera_M_contig72392.17210.1 vs. uniprot
Match: A0A813A747_9DINO (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813A747_9DINO) HSP 1 Score: 82.4 bits (202), Expect = 2.770e-17 Identity = 34/57 (59.65%), Postives = 42/57 (73.68%), Query Frame = 1 Query: 1 EKVFSNGQPNLFCNHYYWIPDPEQRWPDKINVCHTSRRSESKFYCSKAFYCNWTNNP 171 E+VF QPNL CN Y+WIP+P+Q WPDK VC+ + KFYC+KA +CNWTNNP Sbjct: 124 ERVFRQ-QPNLLCNFYHWIPNPDQIWPDKFYVCN----EDPKFYCTKAEFCNWTNNP 175
BLAST of mRNA_M-pyrifera_M_contig72392.17210.1 vs. uniprot
Match: R7QVC6_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QVC6_CHOCR) HSP 1 Score: 86.3 bits (212), Expect = 3.290e-17 Identity = 43/132 (32.58%), Postives = 62/132 (46.97%), Query Frame = 1 Query: 1 EKVFSNGQPNLFCNHYYWIPDPEQRWPDK--INVCHTSRRS--ESKFYCSKAFYCNWTNNPFLIHKEWWIKEYVESRFKQWT-------RVDPFQDLESYMNWEPDSWNSLPWIVAQGDGLFKHVDRNNFGF 363 E Q NL C ++W DP +P + + C + R E YCS + YC WTNNP + K+W++ E E K++ + PF D E Y NW +W + VA G GLF+H + + F Sbjct: 362 ESSIMTQQKNLLCFVHHWQKDPTTMYPGEGIMRRCGGAERKVEEVDIYCSSSVYCQWTNNPAVFKKKWFMDEVGERYRKEYKIEFDKHGKTSPFLDFEYYTNWRSYAWTDKNFTVAVGTGLFRHAESEHQHF 493
BLAST of mRNA_M-pyrifera_M_contig72392.17210.1 vs. uniprot
Match: A0A5J4YZ91_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YZ91_PORPP) HSP 1 Score: 71.6 bits (174), Expect = 4.330e-12 Identity = 37/129 (28.68%), Postives = 55/129 (42.64%), Query Frame = 1 Query: 22 QPNLFCNHYYWIPDPEQRWPDK-INVCHTSRRSESK--------------FYCSKAFYCNWTNNPFLIHKEWWIKEYVESRFKQWTRVDPFQDLESYMNWEPDSWNSLPWIVAQGDGLFKHVDRNNFGF 363 Q +L C ++W+P P+Q +P I C R ++C+ A +C WTNNP + + W+++ K W D ES+ N W +L VA G GLF HV+ F Sbjct: 270 QSDLLCYAHHWLPRPDQHFPQHMITQCAVPRAEPPPLEQPGSEPDPDPELYFCAPAKFCQWTNNPSMFRRSWFLRTMALPYMKAWNSSS--SDFESWANSAQLKWATLNVTVALGGGLFSHVELKESRF 396
BLAST of mRNA_M-pyrifera_M_contig72392.17210.1 vs. uniprot
Match: A0A1G9NIN7_9FLAO (Glycosyl transferase family 2 n=1 Tax=Chryseobacterium taihuense TaxID=1141221 RepID=A0A1G9NIN7_9FLAO) HSP 1 Score: 60.8 bits (146), Expect = 1.510e-8 Identity = 33/103 (32.04%), Postives = 56/103 (54.37%), Query Frame = 1 Query: 49 YWIPDPEQRWPDKINVCHTSRRSESKFYCSKAFYCNWTNNPFLIHKEWWIKEYVESRFKQWTRVDPFQDLESYMNWEPDSWNSLPWIVAQGDGLFKHVDRNNF 357 YW+ DP +PDKI + E +++ + + + NWTNNPFLI KE+++K KQ++ + ++ +W W+ + +AQG+GLF H D + Sbjct: 160 YWL-DPALEFPDKI-------QKEGEYFITTSRWANWTNNPFLIKKEFYLKT-----MKQFSGTSTSLE-KNIASW----WSKQNFKIAQGEGLFMHNDLKKY 244
BLAST of mRNA_M-pyrifera_M_contig72392.17210.1 vs. uniprot
Match: A0A0J7J1L2_9FLAO (Uncharacterized protein n=1 Tax=Chryseobacterium koreense CCUG 49689 TaxID=1304281 RepID=A0A0J7J1L2_9FLAO) HSP 1 Score: 59.7 bits (143), Expect = 4.030e-8 Identity = 33/103 (32.04%), Postives = 51/103 (49.51%), Query Frame = 1 Query: 49 YWIPDPEQRWPDKINVCHTSRRSESKFYCSKAFYCNWTNNPFLIHKEWWIKEYVESRFKQWTRVDPFQDLESYMNWEPDSWNSLPWIVAQGDGLFKHVDRNNF 357 YW+ DP +PDKI + + ++ + A + NWTNNPFL+ KE++ K + T + F+ W W P+ +AQG+GLF H D + Sbjct: 160 YWL-DPAAEFPDKI-------QKQGAYFITTARWANWTNNPFLLKKEFFAKNIAKIA----TSSEHFE--RDIAEW----WVKQPFKIAQGEGLFTHHDLEKY 244
BLAST of mRNA_M-pyrifera_M_contig72392.17210.1 vs. uniprot
Match: UPI001F19C310 (hypothetical protein n=1 Tax=Chryseobacterium sp. R2A-55 TaxID=2744445 RepID=UPI001F19C310) HSP 1 Score: 58.5 bits (140), Expect = 1.050e-7 Identity = 32/99 (32.32%), Postives = 48/99 (48.48%), Query Frame = 1 Query: 49 YWIPDPEQRWPDKINVCHTSRRSESKFYCSKAFYCNWTNNPFLIHKEWWIKEYVESRFKQWTRVDPFQDLESYMNWEPDSWNSLPWIVAQGDGLFKHVD 345 YW+ DP + +PDKI + + ++ + A + NWTNNPFL+ K+++ K E V W W P+ +AQG+GLF H D Sbjct: 159 YWL-DPAESFPDKI-------QKQGDYFTTTARWANWTNNPFLLKKDFYHKNIAE------IAVSSEHFERDIAEW----WVKQPFKIAQGEGLFMHHD 239 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig72392.17210.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig72392.17210.1 >prot_M-pyrifera_M_contig72392.17210.1 ID=prot_M-pyrifera_M_contig72392.17210.1|Name=mRNA_M-pyrifera_M_contig72392.17210.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=122bp EKVFSNGQPNLFCNHYYWIPDPEQRWPDKINVCHTSRRSESKFYCSKAFYback to top mRNA from alignment at M-pyrifera_M_contig72392:1..366+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig72392.17210.1 ID=mRNA_M-pyrifera_M_contig72392.17210.1|Name=mRNA_M-pyrifera_M_contig72392.17210.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=366bp|location=Sequence derived from alignment at M-pyrifera_M_contig72392:1..366+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig72392:1..366+ >mRNA_M-pyrifera_M_contig72392.17210.1 ID=mRNA_M-pyrifera_M_contig72392.17210.1|Name=mRNA_M-pyrifera_M_contig72392.17210.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=732bp|location=Sequence derived from alignment at M-pyrifera_M_contig72392:1..366+ (Macrocystis pyrifera P11B4 male)back to top |