mRNA_M-pyrifera_M_contig72308.17191.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig72308.17191.1 vs. uniprot
Match: A0A5A8EHB1_CAFRO (Beta_helix domain-containing protein n=5 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EHB1_CAFRO) HSP 1 Score: 179 bits (453), Expect = 6.040e-48 Identity = 116/273 (42.49%), Postives = 148/273 (54.21%), Query Frame = 1 Query: 16 SLSRAGLGWSWTYA-TLQSATNNTVAFNKLHDVFTGSSGVSSLEDGGCIYHLGISSTHGNFETGTKIVNNLCYAVDAWGGEGSYGSWGLYLDQASSYVTLEKNIVWQTKD-GSHIHYGNENLWKNNIFADSGAYDCSSS-GCQPALFRSSRHSSGEG--AISSSNLQSNIFLLTQNKSELFYSTISDAFANFTLDYNLYWSQAATPTPSQLTFPPSQSPTTFPQWQAQGKDVHSMIADPMFDSLFPT-FQLAQNSPAFKLGFEQIDTSQYGPR 816 S + GW+W Y+ T A + FN LHDVF+G L DGGC+Y LG + GT + NN C+ V + G YG WG Y D+ SS + N+ TK G H HYG N ++NNI A GA+ C + C A RSS G G ++SS + NI LL Q S F++ AN T N+YWS T + L F PSQSP +F QWQ GKDVHS++ADP+F + F+LA +SPA KLGF+QID S GPR Sbjct: 449 SYTAVSSGWTWGYSPTTVRAVR--ITFNDLHDVFSG-----KLSDGGCVYTLGA-------QPGTLVDNNQCWNVHSRG----YGGWGYYTDEGSSDIIFTNNLATVTKSAGVHQHYGLNNRFENNILAFPGAWPCDDAPNCDNAGIRSSVAGPGNGKYSLSSFSFVRNIVLLNQPFSAPFFTVAKTGLANDTFASNVYWS---TTNKTDLPFGPSQSPVSFAQWQQSGKDVHSVVADPLFGNPAERDFRLAPDSPALKLGFQQIDFSTNGPR 700
BLAST of mRNA_M-pyrifera_M_contig72308.17191.1 vs. uniprot
Match: A9UPB5_MONBE (Uncharacterized protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UPB5_MONBE) HSP 1 Score: 154 bits (388), Expect = 4.380e-39 Identity = 107/276 (38.77%), Postives = 143/276 (51.81%), Query Frame = 1 Query: 13 FSLSRAGLGWSWTYATLQSATNNTVAFNKLHDVFTGSSGVSSLEDGGCIYHLGISSTHGNFETGTKIVNNLCYAVDAWGGEGSYGSWGLYLDQASSYVTLEKNIVWQTK-DGSHIHYGNENLWKNNIFADSGAYDCSSSGCQPALFRSSRH------SSGEGAISSSNLQSNIFLLTQNKSELFYSTISDAFANFTLDYNLYWSQAATPTPSQLTFPPSQSPTTFPQWQAQGKDVHSMIADPMFDS--LFPTFQLAQNSPAFKLGFEQIDTSQYGP 813 FS + LGW+WTYA + NN +A N + + G L D GCIY LG + GTKI +N+C V ++ +YG WGLY DQAS +TL NIV+QTK G H H+G N++ NN+FAD ++C RSS+H S+ +G SS NI L N +FYSTI F N T D N Y+ S + FP ++ T QW+ G+D+HS+IADP+F + L L SPA GF+ I+ S GP Sbjct: 380 FSYTGVSLGWTWTYAETSNR-NNVIALNNIDTI-----GQHLLSDMGCIYLLG-------HQPGTKIDHNVCARVYSY----NYGGWGLYTDQASRDITLTNNIVYQTKCAGLHQHFGLNNIFMNNVFADVDTWNCDGG------IRSSQHAGVCNASAPDGPCSSFTFFRNILYL--NDGPVFYSTIPTGFENMTFDNNTYYKLDH----SSVVFPEKRNLT---QWRQHGQDMHSIIADPLFTNPNLDDFSHLRPASPALARGFQPINISLVGP 623
BLAST of mRNA_M-pyrifera_M_contig72308.17191.1 vs. uniprot
Match: F2U2T3_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U2T3_SALR5) HSP 1 Score: 154 bits (388), Expect = 4.890e-39 Identity = 97/238 (40.76%), Postives = 131/238 (55.04%), Query Frame = 1 Query: 127 GVSSLEDGGCIYHLGISSTHGNFETGTKIVNNLCYAVDAWGGEGSYGSWGLYLDQASSYVTLEKNIVWQTK-DGSHIHYGNENLWKNNIFADSGAYDCSSSGCQPALFRSSRH------SSGEGAISSSNLQSNIFLLTQNKSELFYSTISDAFANFTLDYNLYWSQAATPTPSQLTFPPSQSPTTFPQWQAQGKDVHSMIADPMF-DSLFPTF-QLAQNSPAFKLGFEQIDTSQYGP 813 G+S L D GC+Y LG + GT+++NN+C+ V + +YG WGLY D+ SSY+ L NIV+ TK G H HYG +N + NNI A+ C A RSS+H ++ +GA SS +NI + ++F +TI F N T D N YW TP + FP + TF QW+A+GKDVHS+IADP F D + + NSPA KLGF+ I+ SQ GP Sbjct: 417 GLSLLSDMGCVYTLGK-------QPGTQVINNICHTVYTY----NYGGWGLYTDEGSSYIQLRDNIVFHTKCAGVHQHYGTDNTFSNNILAEVNTLTCD------AAIRSSQHPGNCTAAAPDGACSSFTFDTNIVYVRDY--DVFDATIPTGFQNMTFDNNTYWKGDKTP----IVFPEKK---TFKQWKAEGKDVHSVIADPQFVDGTHNDWSRFNSNSPALKLGFKPINISQVGP 628
BLAST of mRNA_M-pyrifera_M_contig72308.17191.1 vs. uniprot
Match: A0A2U3KM29_9BACT (Putative pectin lyase n=1 Tax=Candidatus Sulfotelmatobacter kueseliae TaxID=2042962 RepID=A0A2U3KM29_9BACT) HSP 1 Score: 137 bits (345), Expect = 4.940e-33 Identity = 95/267 (35.58%), Postives = 139/267 (52.06%), Query Frame = 1 Query: 22 SRAGLGWSWTYATLQSATNNTVAFNKLHDVFTGSSGVSSLEDGGCIYHLGISSTHGNFETGTKIVNNLCYAVDAWGGEGSYGSWGLYLDQASSYVTLEKNIVWQTKD-GSHIHYGNENLWKNNIFADSGAYDCSSSGCQPALFRSSRHSSGEGAISSSNLQSNIFLLTQNKSELFYSTISDAFANFTLDYNLYWSQAATPTPSQLTFPPSQSPTTFPQWQAQGKDVHSMIADPMFDSLFP-TFQLAQNSPAFKLGFEQIDTSQYGPR 816 S G+GW+W Y +A +N + FN +HD+ G + D GC+Y LG+ + GT + NN C+ V + SYG WG+Y D+ SS + +E N+V++T+D G H HYG N+ +NNIFA Q + R + +G S +++ NIF+ + L D NF D NLY+ A + S + F +F +WQ G+DVHS++ADP+F L F L SPA K+GF+ ID S+ GPR Sbjct: 464 SGIGVGWTWGYLPT-AAHSNVIEFNHIHDI-----GRGVMADLGCVYLLGV-------QPGTVVRNNFCHDVTR--PDASYGGWGIYTDEGSSEIVIENNLVFRTQDAGFHQHYGQNNVVRNNIFALG----------QGSQLRRTDEEAGH----SFDVEHNIFVW--DSGTLLDQEWKDN--NFLFDNNLYF-YAGSGGGSAIRF----GDLSFEEWQKNGQDVHSIVADPLFVDLQKGNFSLQPESPALKIGFKPIDLSEVGPR 692
BLAST of mRNA_M-pyrifera_M_contig72308.17191.1 vs. uniprot
Match: A0A7C5FX05_9BACT (Right-handed parallel beta-helix repeat-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C5FX05_9BACT) HSP 1 Score: 136 bits (343), Expect = 9.750e-33 Identity = 96/269 (35.69%), Postives = 142/269 (52.79%), Query Frame = 1 Query: 13 FSLSRAGLGWSWTYATLQSATNNTVAFNKLHDVFTGSSGVSSLEDGGCIYHLGISSTHGNFETGTKIVNNLCYAVDAWGGEGSYGSWGLYLDQASSYVTLEKNIVWQTKDGS-HIHYGNENLWKNNIFADSGAYDCSSSGCQPALFRSSRHSSGEGAISSSNLQSNIFLLTQNKSELFYSTISDAFANFTLDYNLYWSQAATPTPSQLTFPPSQSPTTFPQW-QAQGKDVHSMIADPMF-DSLFPTFQLAQNSPAFKLGFEQIDTSQYG 810 F + +GW+W Y + A +N +A+N +H + G L D G IY LGI + GT + +N+ + + ++ +YG WGLY D+ SS + +EKN+V++TK G H HYG EN +NNIFA + + + +P + S + NI + N S L S D NF +DYNLYW+ A ++ FP + TF +W + +G+D HS+IADP+F D F+L +NSPAFKLGFE D + G Sbjct: 469 FYYTGISVGWTWGYGRSE-AHHNEIAYNHVHTI-----GQGVLSDMGGIYTLGI-------QPGTHVHHNVFHDIRSY----TYGGWGLYTDEGSSGIVMEKNLVFRTKTGGFHQHYGRENKIQNNIFAFAEEHQLQRTRTEPHI--------------SFFFERNI-VYWDNPSPLLGSNWKDD--NFRMDYNLYWNAAG----HEIRFPDN---LTFEEWKEKRGQDRHSLIADPLFVDPKAEDFRLRENSPAFKLGFEPFDYWEAG 696
BLAST of mRNA_M-pyrifera_M_contig72308.17191.1 vs. uniprot
Match: A0A831ULK7_9BACT (Right-handed parallel beta-helix repeat-containing protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A831ULK7_9BACT) HSP 1 Score: 135 bits (340), Expect = 2.950e-32 Identity = 102/265 (38.49%), Postives = 137/265 (51.70%), Query Frame = 1 Query: 22 SRAGLGWSWTYATLQSATNNTVAFNKLHDVFTGSSGVSSLEDGGCIYHLGISSTHGNFETGTKIVNNLCYAVDAWGGEGSYGSWGLYLDQASSYVTLEKNIVWQTKDGS-HIHYGNENLWKNNIFADSGAYDCSSSGCQPALFRSSRHSSGEGAISSSNLQSNIFLLTQNKSELFYSTISDAFANFTLDYNLYWSQAATPTPSQLTFPPSQSPTTFPQWQAQGKDVHSMIADPMF-DSLFPTFQLAQNSPAFKLGFEQIDTSQYG 810 S +GWSW YA SA +N + FN +H V G L D G IY LG+S GT I NN+ + D+ G WG+Y D+ SS + +E NIV+ T G+ H HYG EN+ +NN+FA S + + L RS R I + NI L N +L ST + N+ LD+N YW + +L F + T QWQA+G DVHS++ADP+F D+ F+L +SPAF LGF IDTS+ G Sbjct: 379 SGLSIGWSWGYAP-SSANHNIIEFNHVHHV-----GHGQLSDMGVIYTLGVSP-------GTVIRNNVFH--DSMSNPRVSGGWGVYTDEGSSDILVENNIVYNTLTGTFHQHYGRENVLRNNVFAYSHS--------RGQLIRS-REEDHVSFI----FERNIVLF--NNGQLLGSTWKNG--NWKLDHNCYWDTSG----YELDF----AGRTLEQWQAEGHDVHSIVADPLFVDAQNADFRLKPDSPAFDLGFVPIDTSEVG 603
BLAST of mRNA_M-pyrifera_M_contig72308.17191.1 vs. uniprot
Match: A0A7Y2AJN8_9BACT (Right-handed parallel beta-helix repeat-containing protein n=1 Tax=Pirellulaceae bacterium TaxID=2699754 RepID=A0A7Y2AJN8_9BACT) HSP 1 Score: 135 bits (340), Expect = 3.020e-32 Identity = 95/261 (36.40%), Postives = 131/261 (50.19%), Query Frame = 1 Query: 34 LGWSWTYATLQSATNNTVAFNKLHDVFTGSSGVSSLEDGGCIYHLGISSTHGNFETGTKIVNNLCYAVDAWGGEGSYGSWGLYLDQASSYVTLEKNIVWQTKDGS-HIHYGNENLWKNNIFADSGAYDCSSSGCQPALFRSSRHSSGEGAISSSNLQSNIFLLTQNKSELFYSTISDAFANFTLDYNLYWSQAATPTPSQLTFPPSQSPTTFPQWQAQGKDVHSMIADPMF-DSLFPTFQLAQNSPAFKLGFEQIDTSQYG 810 +GW W YA A N + FN +H + G L D G +Y LG S GT + NN+ + + +WG YG WGLY D+ S+ + +EKN+V++TK G H HYG EN+ +NNIFA S Y S + L S L+ N+ + + ELF+ + SD N L NLYW P + +F QWQA GKD S++ADP+F D+ F+L +NSPA K+GF D S+ G Sbjct: 420 VGWRWGYAE-SLAVRNRIEFNHIHHL-----GWGWLSDMGGVYTLGPSP-------GTSVSNNVIHDILSWG----YGGWGLYNDEGSTGIVMEKNLVYRTKSGGYHQHYGRENIIRNNIFAYSRQYQLKRSRVEDHL--------------SFTLERNV--VAWDSGELFHGSWSDD--NVKLHDNLYWRSDGHPI--------KINGKSFEQWQATGKDTGSIVADPLFVDAPHDDFRLKENSPAAKIGFVPFDYSKAG 637
BLAST of mRNA_M-pyrifera_M_contig72308.17191.1 vs. uniprot
Match: A0A252DNF1_9NOSO (Uncharacterized protein n=2 Tax=unclassified Nostoc TaxID=2593658 RepID=A0A252DNF1_9NOSO) HSP 1 Score: 134 bits (336), Expect = 8.200e-32 Identity = 97/269 (36.06%), Postives = 142/269 (52.79%), Query Frame = 1 Query: 13 FSLSRAGLGWSWTYATLQSATNNTVAFNKLHDVFTGSSGVSSL-EDGGCIYHLGISSTHGNFETGTKIVNNLCYAVDAWGGEGSYGSWGLYLDQASSYVTLEKNIVWQTKDGS-HIHYGNENLWKNNIFADSGAYDCSSSGCQPALFRSSRHSSGEGAISSSNLQSNIFLLTQNKSELFYSTISDAFANFTLDYNLYWSQAATPTPSQLTFPPSQSPTTFPQWQAQGKDVHSMIADPMFDSLFPT---FQLAQNSPAFKLGFEQIDTSQ 804 F + +GW+W Y + NN + FN +H + S+G L D G IY LG+ + GT I NL + +DA+ SYG+WG+YLD+ SS + +E N++++T+DG H+HYG +NL +NNIFA + A R SR E IS + NI Q +L S +N+ LDYNLYW + F ++ +WQ +G+D +S+IA+P+F + P F+L NSPAFKLGF+Q D +Q Sbjct: 469 FYYTGISVGWTWGYQASPTK-NNVIEFNHIHHIGRLSNGDGPLLNDKGAIYTLGV-------QPGTVIRGNLIHDIDAY----SYGAWGIYLDEGSSQILVENNLIYRTRDGGFHLHYGKDNLIRNNIFAFG----------RVAQIRRSRP---ESHISF-KFERNIIYWKQG--QLLDSDGQWDDSNYLLDYNLYWYGSK----GNFHF----GKLSWQEWQQKGRDKNSLIANPLF--VAPDRDDFRLKPNSPAFKLGFKQTDYNQ 699
BLAST of mRNA_M-pyrifera_M_contig72308.17191.1 vs. uniprot
Match: A0A8I2A3N6_9BACT (Right-handed parallel beta-helix repeat-containing protein n=2 Tax=unclassified Verrucomicrobia TaxID=417295 RepID=A0A8I2A3N6_9BACT) HSP 1 Score: 131 bits (330), Expect = 5.030e-31 Identity = 96/268 (35.82%), Postives = 137/268 (51.12%), Query Frame = 1 Query: 34 LGWSWTYATLQSATNNTVAFNKLHDVFTGSSGVSSLEDGGCIYHLGISSTHGNFETGTKIVNNLCYAVDAWGGEGSYGSWGLYLDQASSYVTLEKNIVWQTKD-GSHIHYGNENLWKNNIFADSGAYDCSSSGCQPALFRSSRHSSGEGAISSSNLQSNIFLLTQNKSELFYST---ISDAFAN--FTLDYNLYWSQAATPTPSQLTFPPSQSPTTFPQWQAQGKDVHSMIADPMF-DSLFPTFQLAQNSPAFKLGFEQIDTSQYGPR 816 +GW+W Y +N + FN LHD+ G + L D G IY LGI + GT I NNL + V A+ +YG WGLY D+ SSY+TLE N+V++ K G H HYG EN+ +NNIFA + + L RS E IS T ++ +++ + + ++ N F LD N+Y+ P + F + T +WQA+G D+HS++ADPMF +S F+L +SPA KL F ID + G R Sbjct: 453 VGWNWGYQETPCR-DNLIEFNHLHDI-----GQNLLSDMGAIYTLGI-------QRGTVIRNNLIHDVHAF----TYGGWGLYTDEGSSYITLENNVVYRCKSAGFHEHYGRENVVRNNIFAFNTEHQ---------LMRSRE----EDHIS----------FTFERNIVYFDSGDLLGGSWTNNRFRLDNNVYFDGRPEARPDSMRF----AGATLAEWQARGHDIHSVVADPMFYNSRAYNFRLNLDSPALKLEFNPIDLRRVGLR 676
BLAST of mRNA_M-pyrifera_M_contig72308.17191.1 vs. uniprot
Match: A0A7V6EC61_9BACT (Beta_helix domain-containing protein n=1 Tax=Verrucomicrobia subdivision 3 bacterium TaxID=2052186 RepID=A0A7V6EC61_9BACT) HSP 1 Score: 125 bits (314), Expect = 1.580e-30 Identity = 95/273 (34.80%), Postives = 137/273 (50.18%), Query Frame = 1 Query: 4 HPLFSLSRAGLGWSWTYATLQSATNNTVAFNKLHDVFTGSSGVSSLEDGGCIYHLGISSTHGNFETGTKIVNNLCYAVDAWGGEGSYGSWGLYLDQASSYVTLEKNIVWQTKD-GSHIHYGNENLWKNNIFADSGAYDCSSSGCQPALFRSSRHSSGEGAISSSNLQSNIFLLTQNKSELFYSTISDAFANFTLDYNLYWSQAATPTPSQLTFPPSQSPTTFPQWQAQGKDVHSMIADPMF-DSLFPTFQLAQNSPAFKLGFEQIDTSQYGPR 816 H LF + +GW+W Y +N + FN L+++ G + L D G IY LGI + GT I NNL + ++A+ +YG WG+Y D+ SSY+ +E NIV+ K G H HYG EN+ +NNIFA + + L R+ E IS ++ ++ N L S S+ F +DYN+Y+ P++ F QW+A+G DVHS+I DP+F D F L +SPA K GF+QID + G R Sbjct: 75 HDLF-YTAISVGWNWGYQETPCH-DNRIEFNHLYNI-----GKALLSDMGGIYTLGI-------QKGTVIRNNLIHDIEAF----TYGGWGIYPDEGSSYILIENNIVYNAKSAGFHQHYGRENIIRNNIFAFNK---------ENQLMRTRE----ENHISFVFERNIVYF---NSGSLLGSNWSND--KFKMDYNIYYDTRIGNDPAKYRF----GKDNLEQWRARGHDVHSVIMDPLFVDPEKYNFLLRPDSPALKFGFKQIDINDIGIR 307 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig72308.17191.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig72308.17191.1 >prot_M-pyrifera_M_contig72308.17191.1 ID=prot_M-pyrifera_M_contig72308.17191.1|Name=mRNA_M-pyrifera_M_contig72308.17191.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=274bp FHPLFSLSRAGLGWSWTYATLQSATNNTVAFNKLHDVFTGSSGVSSLEDGback to top mRNA from alignment at M-pyrifera_M_contig72308:73..894+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig72308.17191.1 ID=mRNA_M-pyrifera_M_contig72308.17191.1|Name=mRNA_M-pyrifera_M_contig72308.17191.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=822bp|location=Sequence derived from alignment at M-pyrifera_M_contig72308:73..894+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig72308:73..894+ >mRNA_M-pyrifera_M_contig72308.17191.1 ID=mRNA_M-pyrifera_M_contig72308.17191.1|Name=mRNA_M-pyrifera_M_contig72308.17191.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1644bp|location=Sequence derived from alignment at M-pyrifera_M_contig72308:73..894+ (Macrocystis pyrifera P11B4 male)back to top |