mRNA_M-pyrifera_M_contig7216.17171.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig7216.17171.1 vs. uniprot
Match: D8LTD6_ECTSI (Protein kinase domain-containing protein (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTD6_ECTSI) HSP 1 Score: 311 bits (796), Expect = 6.100e-83 Identity = 356/892 (39.91%), Postives = 418/892 (46.86%), Query Frame = 1 Query: 1267 GFGNYAFSLEEENGSDLDDAVIDLRSDXXXXXXXXXXDDRAAAPTAARAPSPPPPPSRVEG--PLVGPTRPLSGSHLHRRAVSATNWKSDRSAPAPLQTTSPALT-LKRSGRPSSVAVTQAETRMLSAAAQXXXXXXXXXXXXXXXXXXXELPGWGG-SPPPRLSRSLSLSQAIGQSASSGAGFA--------KVTRCSHRRRSRANSTSSPIPMLEISTSMPTGG-GISDA-AVGGPDWVSRSFGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSSSSGVEGGLPKMRRSSSEVSAAAHSSVPLVRSHRM-SLNWSRSGGGGAAGAADDWSALGGLAGSLGEAGWGGSXRGGDAGLPREGGG-SGDLGVGWILRAP-APPTERCFRAHSPDSVGGDVGAAXXXXXXXRMGDPHARPFSAPSAGAFVGHGVGRSTTSLGSEDXXXXXXXXXXXXXXXXGNQALGRGGMMXXXXXXXXXXGAGPAETPRVSPAE-GVSAAMHRAHALSSVARRMDRLKIRSPDVETHAAEAQQEILASPAGN---------DLDNSLTAAGSTPVRPRPISLPIHLTPVGNWNPAV-DRSRLSGTGGSPTEFLRDYLSGVRGQEEEGDXXXXXXXXXXXXXXXXXXXXSVVARPSVPSPPPGVNFTRTAALGLPSPIAAGLFGRDSGEGSGGRERGECFNKMKDVSRAAGDTNFSRRGGDGXXXXXXXXXXXXXXXXXXXXXGGTRAAAFRDGPSQPRKGNKLGLEARSRTMPTGSTRDSPEGGFLIRRKTVGH----SSF-SSTTWPKXXXXXXXXXXXXXXXXXXXXXXXXXXXGSHSSSRYLSCLSSETGNESPL--QESEGERLRRSRSISSPL--PLAMREFDTPRALTSS 3831 G GN FS+EEEN S+LDDAVID D XXXXXXX ++ P PP P + G P V + + S L R A T+ K+ SPAL L R R + VT E R A AQ GWG SPP RLSRSLSLSQ SA GA KVTR SHRRRSRANSTSSP+P+LE+S SMPTGG G+SDA AV D+ +RSFGS GG S +G R+SS EVS+ S+ PL RSHRM S N S + L + E G S RGG+ +P E GD G GW+LR+P APP +R S GG R HAR S P + G G + L G Q GM PA+TP+ SP++ G SAAM RAH LSSVARRMDRL+IRSP VETHAA+AQ EI+A G+ + SL + TP RPR SLP H TPVGN N A +RSRLSG GGSPTE RDYLSG+ G+EEE D PPGV TR+ ALGLPSPI AGLFG + S + F + G + + G G XXXXXXXX X G A G S RKG KLGL A+++T+P TR SPEGGFLIRRKT+G+ SSF SST+WPK GS SSS YLSCLSS +SP Q++E ++ RSISSPL PL ++EFDTP A SS Sbjct: 365 GNGN-GFSVEEENDSELDDAVIDATGDDSDXXXXXXXXXXXSSTDVIPRPKPPCPTTTTAGSAPAVASS---TXSILKRAAPDPTDLKAHXXXXXXXXXXSPALVGLSRRPRREAQRVTHGEKRA-PALAQASSVEDLARG------------GWGDDSPPARLSRSLSLSQTSAPSAWHGAAXXXXXXXXXXKVTRSSHRRRSRANSTSSPLPVLEMSASMPTGGIGLSDATAVAREDFTARSFGSVASLRHRRRGSL---------------------GGGSXXXGDGIKHARRKSSCEVSSG--SNAPLSRSHRMPSFNHGNS--------LRNPGRPVSLPQGIMERG---SRRGGEE-IPGEALSIGGDAGFGWVLRSPGAPPDDR---RRSKSFAGG-----------ARPSATHARSDSNPVRSS--GGGAAQYPPGLAGAASVDMYGLSGEWARRDSGEQ---ESGMFVAGDKDEEMA---PAQTPQASPSDTGDSAAMRRAHGLSSVARRMDRLEIRSPAVETHAAQAQLEIMADSTGDNPGHGHSIPEATTSLGGSDGTPSRPRISSLPAHYTPVGNSNVARNERSRLSGAGGSPTECFRDYLSGLHGKEEEEDDEELLGEAKHEGKAPKTPSAVAXXXXXXXHSPPGVTCTRSTALGLPSPILAGLFG--DADNSHALQTDASFTPRAGSVASGGSSGAAVDGAPGGXXXXXXXXEAVX--------GEXXVGATGRGASLARKGAKLGLGAKAKTLPARGTRASPEGGFLIRRKTLGNAPSSSSFASSTSWPKAYAGQGREDDTAAEPPKLERLSS----GSRSSSLYLSCLSSGEAVQSPGEGQQAEVAPHQQQRSISSPLSVPLMVKEFDTPSASGSS 1168 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7216.17171.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig7216.17171.1 >prot_M-pyrifera_M_contig7216.17171.1 ID=prot_M-pyrifera_M_contig7216.17171.1|Name=mRNA_M-pyrifera_M_contig7216.17171.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=1277bp LSFFRNRGLDLDLEYPGETSSALASSKGGGGSSGGGAKPALSRGSSVDQPback to top mRNA from alignment at M-pyrifera_M_contig7216:944..11873- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig7216.17171.1 ID=mRNA_M-pyrifera_M_contig7216.17171.1|Name=mRNA_M-pyrifera_M_contig7216.17171.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=10930bp|location=Sequence derived from alignment at M-pyrifera_M_contig7216:944..11873- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig7216:944..11873- >mRNA_M-pyrifera_M_contig7216.17171.1 ID=mRNA_M-pyrifera_M_contig7216.17171.1|Name=mRNA_M-pyrifera_M_contig7216.17171.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=7662bp|location=Sequence derived from alignment at M-pyrifera_M_contig7216:944..11873- (Macrocystis pyrifera P11B4 male)back to top |