mRNA_M-pyrifera_M_contig7190.17126.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig7190.17126.1
Unique NamemRNA_M-pyrifera_M_contig7190.17126.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig7190.17126.1 vs. uniprot
Match: A0A6H5J7N0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7N0_9PHAE)

HSP 1 Score: 359 bits (922), Expect = 9.960e-124
Identity = 178/236 (75.42%), Postives = 198/236 (83.90%), Query Frame = 1 
Query:    1 MGNAPTGPPPPSGGRIVRCKELFMLKKEDIEVFWEIFKQFDLKREGLISRQAFFECIIREERNEFGNAIFSLVDPEDEETLEFGEFVQAVCTFCCLCVTDMLKFCFMVYDKDRSGLMEMEELHHFIKASAKCPSVLHISNVSNNVQSALNHLHLDDHGRLPFASFEIMNKDFPQVLYPVFRLQQSTQRSILGTKWWKQKINELDYWRVNRQHMEQMEKLKEAKNRKRQRDAQIRKG 708
            MGN   GPPPPSG R+ RCKELFML  E+IE  WE+FKQFDLKREGLISRQAFFE II+EERNEFGNAIF+LVDPEDEETLEFGEFVQAVCTFCC CVTDMLKFCFMVYDKDRSGLME+EELHHFIK       VLH SNV+NN+Q A++HL LD+HGRLPF SF+IMNK+FPQVLYPVFRLQQSTQR+ILG KWWK K+NEL +WR NR+H            ++RQR+AQIRKG
Sbjct:    1 MGNKIPGPPPPSGERVARCKELFMLTNENIEALWEVFKQFDLKREGLISRQAFFEGIIQEERNEFGNAIFTLVDPEDEETLEFGEFVQAVCTFCCFCVTDMLKFCFMVYDKDRSGLMEIEELHHFIK-------VLHSSNVTNNIQGAMSHLQLDEHGRLPFDSFKIMNKNFPQVLYPVFRLQQSTQRAILGNKWWKNKVNELGFWRENREHXXXXXXXXXXXRKERQRNAQIRKG 229
[Close]
BLAST of mRNA_M-pyrifera_M_contig7190.17126.1 vs. uniprot
Match: D8LMG3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMG3_ECTSI)

HSP 1 Score: 299 bits (765), Expect = 7.960e-101
Identity = 145/177 (81.92%), Postives = 159/177 (89.83%), Query Frame = 1 
Query:   70 MLKKEDIEVFWEIFKQFDLKREGLISRQAFFECIIREERNEFGNAIFSLVDPEDEETLEFGEFVQAVCTFCCLCVTDMLKFCFMVYDKDRSGLMEMEELHHFIKASAKCPSVLHISNVSNNVQSALNHLHLDDHGRLPFASFEIMNKDFPQVLYPVFRLQQSTQRSILGTKWWKQKI 600
            ML  E+IE  WE+FKQFDLKREGLISRQAFFE II+EERNEFGNAIF+LVDPEDEETLEFGEFVQAVCTFCC CVTDMLKFCFMVYDKDRSGLMEMEELHHFIK       VLH SNV+NN+Q A++HL LD+HGRLPF SF+IMNK+FPQVLYPVFRLQQSTQR+ILG KWWK+K+
Sbjct:    1 MLTNENIEALWEVFKQFDLKREGLISRQAFFEGIIQEERNEFGNAIFTLVDPEDEETLEFGEFVQAVCTFCCFCVTDMLKFCFMVYDKDRSGLMEMEELHHFIK-------VLHSSNVTNNIQGAMSHLQLDEHGRLPFDSFKIMNKNFPQVLYPVFRLQQSTQRAILGNKWWKKKM 170
[Close]
BLAST of mRNA_M-pyrifera_M_contig7190.17126.1 vs. uniprot
Match: A0A835Z730_9STRA (EF-hand domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z730_9STRA)

HSP 1 Score: 191 bits (485), Expect = 3.690e-58
Identity = 93/178 (52.25%), Postives = 129/178 (72.47%), Query Frame = 1 
Query:  100 WEIFKQFDLKREGLISRQAFFECIIREERNEFGNAIFSLVDPEDEETLEFGEFVQ-AVCTFCCLCVTDMLKFCFMVYDKDRSGLMEMEELHHFIKASAKCPSVLHISNVSNNVQSALNHLHLDDHGRLPFASFEIMNKDFPQVLYPVFRLQQSTQRSILGTKWWKQKINELDYWRVNR 630
            W+IFK+ D   +G IS   +F+ ++ E ++  G A+F+L+D +D + +EFGEFVQ AVCTF CL   +ML+F FMVYDKD+SG+ME+E+LH FI         LH S+VSNNVQ A+  L LD+ GRLPF SF+++NK +PQV+YP+FRLQQ+T R ++G KWW  K+  L+Y RV+R
Sbjct:    1 WDIFKRHDTTHDGYISVDTYFDKVVFEPKSTVGQALFALIDTDDPDKIEFGEFVQQAVCTFACLSPAEMLRFAFMVYDKDKSGVMEVEQLHDFIWK-------LHNSDVSNNVQHAMQDLTLDELGRLPFDSFKLLNKQYPQVMYPLFRLQQNTMRFVMGPKWWASKLRRLEYERVHR 171
[Close]
BLAST of mRNA_M-pyrifera_M_contig7190.17126.1 vs. uniprot
Match: A0A7S2D7S8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D7S8_9STRA)

HSP 1 Score: 166 bits (421), Expect = 6.160e-47
Identity = 89/234 (38.03%), Postives = 137/234 (58.55%), Query Frame = 1 
Query:    1 MGNAPTGPPPPSGGRIVRCKELFMLKKEDIEVFWEIFKQFDLKREGLISRQAFFECIIREERNEFGNAIFSLVDPEDEETLEFGEFVQAVCTFCCLCVTDMLKFCFMVYDKDRSGLMEMEELHHFIKASAKCPSVLHISNVSNNVQSALNHLHLDDHGRLPFASFEIMNKDFPQVLYPVFRLQQSTQRSILGTKWWKQKINELDYWRVNRQHMEQMEKLKEAKNRKRQRDAQIR 702
            MGN+     P +  R+ R  E+  L   DI+ FW +F++ D  R G+++ + FF  I++E RN FGNAIF L+D ED + LEFGEF+Q V T+CC    ++L+FCF ++D++++G ++ +EL  F+        VLH      NV++A   +     G+  F  F+ +NKDFP VLYP FR+QQ+   +I+G  WW+QK   L   + +++        +E  NR+R R  QIR
Sbjct:    1 MGNSA----PVADDRVQRAAEMVKLNVSDIKGFWNVFRKCDYDRIGIVATEDFFTKIVQEGRNMFGNAIFELIDAEDPDKLEFGEFLQGVVTYCCFDELEILQFCFFIFDREKNGYIDQDELKFFV-------DVLHNEQQVANVRTAFQSIKFQTDGKFDFPEFQKLNKDFPTVLYPAFRMQQNMMLNIMGEDWWRQKKLMLTLDKEDQRSAHARMMRREFNNRERTRQKQIR 223
[Close]
BLAST of mRNA_M-pyrifera_M_contig7190.17126.1 vs. uniprot
Match: A0A2R5GWK3_9STRA (Calmodulin-like protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GWK3_9STRA)

HSP 1 Score: 143 bits (361), Expect = 1.880e-37
Identity = 78/220 (35.45%), Postives = 130/220 (59.09%), Query Frame = 1 
Query:   43 RIVRCKELFMLKKEDIEVFWEIFKQFDLKREGLISRQAFFECIIREERNEFGNAIFSLVDPEDEETLEFGEFVQAVCTFCCLCVTDMLKFCFMVYDKDRSGLMEMEELHHFIKASAKCPSVLHISNVSNNVQSALNHLHLDDHGRLPFASFEIMNKDFPQVLYPVFRLQQSTQRSILGTKWWKQKINELDYWRVNRQHMEQMEKLKEAKNRKRQRDAQIR 702
            R+ +  ++  L K++I  FW IF+++D    G I  + F+  +I EER  FG+++F LVD +   TL+F EFVQ + T+      D+LKFCF V+DKD++G ++ +ELH  ++       +LH +N ++N ++AL +   +  G++ F  F+ MN  FPQ+L+P FR+QQ+   + LG +WW  K   L   R     +E+  +LKE + + R +  Q+R
Sbjct:   11 RLQKTIDMLKLSKKEINKFWRIFQKYDRDHGGTIDVEEFYR-LIEEERTVFGDSLFELVDIDCSGTLDFSEFVQTIATYALFARVDILKFCFFVFDKDKNGYIDSDELHALVE-------MLHGNNPTSNCRTALANFDTNSDGKIDFEEFQAMNVRFPQLLHPAFRMQQNMMINTLGEQWWNGKKLMLQEERNADNALEERLRLKELQRQHRNQQRQVR 222
[Close]
BLAST of mRNA_M-pyrifera_M_contig7190.17126.1 vs. uniprot
Match: A0A7S1UH45_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UH45_9STRA)

HSP 1 Score: 137 bits (346), Expect = 3.120e-36
Identity = 74/205 (36.10%), Postives = 118/205 (57.56%), Query Frame = 1 
Query:    1 MGNAPTGPPPPSGGRIVRCKELFMLKKEDIEVFWEIFKQFDLKREGLISRQAFF--ECIIREERNEFGNAIFSLVDPEDEETLEFGEFVQAVCTFCCLCVTDMLKFCFMVYDKDRSGLMEMEELHHFIKASAKCPSVLHISNVSNNVQSALNHLHLDDHGRLPFASFEIMNKDFPQVLYPVFRLQQSTQRSILGTKWWKQKINEL 609
            MG   + PP     RI++  +   +   +I + W+ F+ +D    G IS+  FF   C  RE   +FGNAI  L D +DE TL+FG+F Q   TF      +ML+FCF V+DKD++G M+ +EL+ F+       + ++ + V +N+ S +  L+ D+ GRL +  F  M++ FP VLYPVF+ Q + + +++G KWW Q++  L
Sbjct:    1 MGGGHSHPPIDDDERILKVVDTLEMTSNEIGMLWDAFRAYDHNAVGSISKIDFFCNICDQREWETDFGNAILELCDVKDEGTLDFGQFTQICGTFGAFQTKEMLQFCFFVFDKDKNGHMDEDELNAFV-------ADIYGNAVPSNILSVIKGLNFDEDGRLYYPQFAAMHRQFPAVLYPVFQFQTNLRTNVMGAKWWNQRLARL 198
[Close]
BLAST of mRNA_M-pyrifera_M_contig7190.17126.1 vs. uniprot
Match: A0A8J2S6B5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S6B5_9STRA)

HSP 1 Score: 137 bits (345), Expect = 7.950e-36
Identity = 75/228 (32.89%), Postives = 131/228 (57.46%), Query Frame = 1 
Query:   19 GPPPPSGGRIVRCKELFMLKKEDIEVFWEIFKQFDLKREGLISRQAFFECIIREERNEFGNAIFSLVDPEDEETLEFGEFVQAVCTFCCLCVTDMLKFCFMVYDKDRSGLMEMEELHHFIKASAKCPSVLHISNVSNNVQSALNHLHLDDHGRLPFASFEIMNKDFPQVLYPVFRLQQSTQRSILGTKWWKQKINELDYWRVNRQHMEQMEKLKEAKNRKRQRDAQIR 702
            G  P +  RI +  + F LK++DI V W +FK+ D +R  +I+   F++ I+   R  F + +F L++  D E+++FGEFV AV T+C   + ++LKFCF V+D+D+ G +  EE+  F+ A       +H + +S NV+ AL++L     G+  F  F+ M+  +P VL+P FRLQ +  +++ G ++W+ K  EL   + + +  E   + +E     + R+ Q+R
Sbjct:   11 GVAPTADDRIAKAMQTFNLKEKDIRVLWHMFKKHDKERRSIIAISDFYDKIVFVPRTIFCDGLFDLIEAADSESIDFGEFVAAVTTYCFFEIPEVLKFCFFVFDRDKKGFITQEEMRLFVDA-------MHGNEMSTNVEFALDNLKYRKDGKFDFEEFKGMHHLYPSVLFPAFRLQNAMMQAMGGEQFWESKKLELSMQKEDERKREANREAREKAEAYKYREDQVR 231
[Close]
BLAST of mRNA_M-pyrifera_M_contig7190.17126.1 vs. uniprot
Match: A0A8K1C2H3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C2H3_PYTOL)

HSP 1 Score: 133 bits (335), Expect = 6.140e-34
Identity = 67/181 (37.02%), Postives = 111/181 (61.33%), Query Frame = 1 
Query:   73 LKKEDIEVFWEIFKQFDLKREGLISRQAFFECIIREERNEFGNAIFSLVDPEDEETLEFGEFVQAVCTFCCLCVTDMLKFCFMVYDKDRSGLMEMEELHHFIKASAKCPSVLHISNVSNNVQSALNHLHLDDHGRLPFASFEIMNKDFPQVLYPVFRLQQSTQRSILGTKWWKQKINELDY 615
            LK +D++  +  F + D  + G I R  F++ I  E+ +EFG+AIF+L+D ++   L+F E+V+A+  FC L   DMLKFCF V+D D++G +E  EL H ++       +LH    ++N++ A      +D G++ F  F+++N  FP +LYP FR+QQ+ +   +G  WW++KI EL +
Sbjct:   25 LKDDDLKSLYAKFLKCDKDKGGTIDRAEFYKSI-DEKDSEFGDAIFALIDEDNSGQLDFSEYVEALGKFCVLSKEDMLKFCFNVFDADKNGTIEGPELTHLME-------MLHADGQTSNMKQAFKSFDFNDDGKIDFQEFQMLNAQFPSLLYPAFRIQQNMRIYTMGVSWWRKKIEELHH 197
[Close]
BLAST of mRNA_M-pyrifera_M_contig7190.17126.1 vs. uniprot
Match: A0A6A3K789_9STRA (Uncharacterized protein n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3K789_9STRA)

HSP 1 Score: 132 bits (333), Expect = 1.520e-33
Identity = 71/186 (38.17%), Postives = 112/186 (60.22%), Query Frame = 1 
Query:   73 LKKEDIEVFWEIFKQFDLK-------REGLISRQAFFECIIREERNEFGNAIFSLVDPEDEETLEFGEFVQAVCTFCCLCVTDMLKFCFMVYDKDRSGLMEMEELHHFIKASAKCPSVLHISNVSNNVQSALNHLHLDDHGRLPFASFEIMNKDFPQVLYPVFRLQQSTQRSILGTKWWKQKINEL 609
            L  +D+ V +  F ++D +       + G I R  F+  I  E+ +EFG+AIF+L+D ++   L+F E+V+A+  FC L   DMLKFCF V+D D++G +E EEL H ++       +LH    ++N++ AL     +  G++ FA F+ +N  FP +LYP FR+QQ+ +   LG KWW++KI EL
Sbjct:   25 LTAKDLRVLYGRFSRYDKEVLRSLTCKSGTIDRSEFYTSI-DEKHSEFGDAIFALIDEDNSGVLDFSEYVEALGKFCLLNKEDMLKFCFNVFDDDKNGTIEGEELTHLLE-------ILHADEQTSNMKHALKTFDFNGDGKIDFAEFKQLNTQFPSLLYPAFRIQQNMKIFTLGEKWWERKIEEL 202
[Close]
BLAST of mRNA_M-pyrifera_M_contig7190.17126.1 vs. uniprot
Match: A0A7S2C3E2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C3E2_9STRA)

HSP 1 Score: 127 bits (320), Expect = 1.290e-31
Identity = 76/235 (32.34%), Postives = 125/235 (53.19%), Query Frame = 1 
Query:    1 MGNAPTGPPPPSGGRIVRCKELFMLKKEDIEVFWEIFKQFDLKREGLISRQAFFECIIREERNEFGNAIFSLVDPEDEETLEFGEFVQAVCTFCCLCVTDMLKFCFMVYDKDRSGLMEMEELHHFIKASAKCPSVLHISNVSNNVQSALNHLHLDDHGRLPFASFEIMNKDFPQVLYPVFRLQQSTQRSILGTKWWKQKINELDYWRVNRQHMEQMEKLKEAKNRKRQRDAQIRK 705
            MG A + P P S  R ++  EL  +  +++ +FW  F+  D K  G +    F++    E+R+ FG+AIF L+D     +L+FGEFV AV T+C     +ML+FCF ++DKD++G +E EEL   +              +  N + A++ L  +D G++ F  F+  N+ FP + YP FR+Q +    I G  WW++K   L   +  ++  E+  K KE    ++ +  +IRK
Sbjct:    1 MGAANSVPTPDS--RTLKAMELGHINMKELGIFWSAFRSIDKKLTGSVDISDFYK-FFEEKRSIFGDAIFELIDCNQSGSLDFGEFVHAVVTYCLFEQDEMLRFCFYIFDKDKNGYIEQEELRWMVNILYGLGPT---DKLKGNTKVAVDRLDFNDDGKVDFKEFKEFNRSFPALFYPAFRIQVNMINLIAGDAWWEKKKRWLQDEKDRKRAREEYSKRKEKARLRKMQQRKIRK 229
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7190.17126.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J7N0_9PHAE9.960e-12475.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LMG3_ECTSI7.960e-10181.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z730_9STRA3.690e-5852.25EF-hand domain-containing protein (Fragment) n=1 T... [more]
A0A7S2D7S8_9STRA6.160e-4738.03Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A2R5GWK3_9STRA1.880e-3735.45Calmodulin-like protein n=1 Tax=Hondaea fermentalg... [more]
A0A7S1UH45_9STRA3.120e-3636.10Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A8J2S6B5_9STRA7.950e-3632.89Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A8K1C2H3_PYTOL6.140e-3437.02Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6A3K789_9STRA1.520e-3338.17Uncharacterized protein n=2 Tax=Phytophthora rubi ... [more]
A0A7S2C3E2_9STRA1.290e-3132.34Hypothetical protein n=1 Tax=Florenciella parvula ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7190contigM-pyrifera_M_contig7190:3874..11585 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score300.8
Seed ortholog evalue5.5e-79
Seed eggNOG ortholog2880.D8LMG3
KEGG rclassRC00002,RC00017
KEGG koko:K04718,ko:K06268
KEGG ReactionR01926,R02976
KEGG Pathwayko00600,ko01100,ko04010,ko04020,ko04022,ko04071,ko04072,ko04114,ko04218,ko04310,ko04360,ko04370,ko04371,ko04380,ko04650,ko04658,ko04659,ko04660,ko04662,ko04666,ko04720,ko04724,ko04921,ko04922,ko04924,ko05010,ko05014,ko05031,ko05152,ko05166,ko05167,map00600,map01100,map04010,map04020,map04022,map04071,map04072,map04114,map04218,map04310,map04360,map04370,map04371,map04380,map04650,map04658,map04659,map04660,map04662,map04666,map04720,map04724,map04921,map04922,map04924,map05010,map05014,map05031,map05152,map05166,map05167
KEGG ModuleM00100
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Ca2 -binding protein (EF-Hand superfamily
EggNOG OGsCOG5126@1,KOG0034@2759
Ec32 ortholog descriptionEF-hand domain pair
Ec32 orthologEc-05_002650.1
EC2.7.1.91
COG Functional cat.DTZ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01009
Exons7
Model size708
Cds size708
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816614.7219546-CDS-M-pyrifera_M_contig7190:3873..39461622816614.7219546-CDS-M-pyrifera_M_contig7190:3873..3946Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7190 3874..3946 +
1692278078.5076463-CDS-M-pyrifera_M_contig7190:3873..39461692278078.5076463-CDS-M-pyrifera_M_contig7190:3873..3946Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7190 3874..3946 +
1622816614.7341297-CDS-M-pyrifera_M_contig7190:4119..41741622816614.7341297-CDS-M-pyrifera_M_contig7190:4119..4174Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7190 4120..4174 +
1692278078.5186245-CDS-M-pyrifera_M_contig7190:4119..41741692278078.5186245-CDS-M-pyrifera_M_contig7190:4119..4174Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7190 4120..4174 +
1622816614.7457712-CDS-M-pyrifera_M_contig7190:4544..46671622816614.7457712-CDS-M-pyrifera_M_contig7190:4544..4667Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7190 4545..4667 +
1692278078.530725-CDS-M-pyrifera_M_contig7190:4544..46671692278078.530725-CDS-M-pyrifera_M_contig7190:4544..4667Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7190 4545..4667 +
1622816614.75831-CDS-M-pyrifera_M_contig7190:5016..51671622816614.75831-CDS-M-pyrifera_M_contig7190:5016..5167Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7190 5017..5167 +
1692278078.5459363-CDS-M-pyrifera_M_contig7190:5016..51671692278078.5459363-CDS-M-pyrifera_M_contig7190:5016..5167Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7190 5017..5167 +
1622816614.7691607-CDS-M-pyrifera_M_contig7190:5474..55701622816614.7691607-CDS-M-pyrifera_M_contig7190:5474..5570Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7190 5475..5570 +
1692278078.555307-CDS-M-pyrifera_M_contig7190:5474..55701692278078.555307-CDS-M-pyrifera_M_contig7190:5474..5570Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7190 5475..5570 +
1622816614.7798407-CDS-M-pyrifera_M_contig7190:10850..109491622816614.7798407-CDS-M-pyrifera_M_contig7190:10850..10949Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7190 10851..10949 +
1692278078.5727437-CDS-M-pyrifera_M_contig7190:10850..109491692278078.5727437-CDS-M-pyrifera_M_contig7190:10850..10949Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7190 10851..10949 +
1622816614.7903194-CDS-M-pyrifera_M_contig7190:11474..115851622816614.7903194-CDS-M-pyrifera_M_contig7190:11474..11585Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7190 11475..11585 +
1692278078.5870554-CDS-M-pyrifera_M_contig7190:11474..115851692278078.5870554-CDS-M-pyrifera_M_contig7190:11474..11585Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7190 11475..11585 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7190.17126.1prot_M-pyrifera_M_contig7190.17126.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig7190 3874..11585 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig7190.17126.1

>prot_M-pyrifera_M_contig7190.17126.1 ID=prot_M-pyrifera_M_contig7190.17126.1|Name=mRNA_M-pyrifera_M_contig7190.17126.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=236bp
MGNAPTGPPPPSGGRIVRCKELFMLKKEDIEVFWEIFKQFDLKREGLISR
QAFFECIIREERNEFGNAIFSLVDPEDEETLEFGEFVQAVCTFCCLCVTD
MLKFCFMVYDKDRSGLMEMEELHHFIKASAKCPSVLHISNVSNNVQSALN
HLHLDDHGRLPFASFEIMNKDFPQVLYPVFRLQQSTQRSILGTKWWKQKI
NELDYWRVNRQHMEQMEKLKEAKNRKRQRDAQIRKG
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mRNA from alignment at M-pyrifera_M_contig7190:3874..11585+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig7190.17126.1 ID=mRNA_M-pyrifera_M_contig7190.17126.1|Name=mRNA_M-pyrifera_M_contig7190.17126.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=7712bp|location=Sequence derived from alignment at M-pyrifera_M_contig7190:3874..11585+ (Macrocystis pyrifera P11B4 male)
ATGGGTAATGCCCCCACTGGCCCTCCACCTCCTTCAGGGGGCAGAATTGT
TCGGTGCAAGGAGCTTTTTATGCGTGAGCCGAGATTTTCTGCAAAACACA
CATTTTACACATGCAAATAAACGCGAGTTTTTTTACAGCATTGCTGCAGT
TTAGCTTGTATGATCGATATATGAGTTTCATGAGCAATTAAACACGCATA
CGAAGCTAACAGCGTTGCCCTCGTTGACCGCATTTTGCGTGTACAGTCAA
GAAGGAGGACATTGAAGTGTTTTGGGAGATCTTCAAGCAGTTTGACCTCA
AGTGAGTGTTGATCGCCACCTCGAATGTCGCTCCACTTGCCTTGAATCTT
CACAGCGTACATGGAGTACACAGGCGCATTCTACACAGCACATACTCGTA
CAGTTAGTGAATTATCCAACGCTCTCGCCGAGTGGCAGGTTTACGAACTG
CAGAACAATACGCGACCACTCGCAAGCTAGCGCTTGTCTAATGTAGAACC
CCAAACCTCCAACAGATGTCACCACGCGGATTAAGCCGCGCCTGCCGCTG
TTTGACTCAGTTAAAATCAAGCCGATAAAATATACCAGGGTACCTGGCCT
ATTTCTGAAGTGTATGCAGCGATTCATTTACAGGCCAGATCGTGAACTTT
TTATTCCATTGAGTGTTTCAGGCGCGAAGGGCTAATCAGCAGACAGGCGT
TTTTTGAATGCATCATTCGGGAAGAACGGAATGAGTTCGGGAACGCCATA
TTTTCGCTCGTGGATCCTGAGGACGAAGAGACCCTTGAATTTGGGTGAGT
TGGCACGTTGGCGCTGACTGGGAGAAGGAGGGGCAGTGTTTGCCTTGCCG
GATTCCTGGCCCCGATGAAGGAAACGATACTGCTGTAGTCCAATATATAT
ATCGCAAATTATCTATAGAATCCAGGCGGGCCATCGTTCTATTGTGCAAC
TAAAAATAAAAATGAAAATGAAACCACACCACTTCTGACAACGACAACGA
CAACGACGACAACTACGCACATCATTCCGTTTTAGCCTCTACCAGGTATA
TATTAGTATAATTCGTACACAAGTGCTGATATTGACTTTCACGACCGATC
ATCTTGCTCGCTTGTGCTATCTCTCATGATCGGCACCGCTCAGCGAATTC
GTCCAGGCTGTGTGCACATTCTGCTGCCTTTGCGTTACGGATATGCTCAA
GTTTTGCTTCATGGTTTACGATAAAGACCGTTCTGGGCTGATGGAAATGG
AAGAACTTCACCACTTCATCAAGGCAAGTGCTAAGTGCCCCTCGGTAGGG
GAACGGGTACCTTACAAGCTCCTTCGTGTCAGGTTTCGCAGTCAAGAGCG
CATAGCATGCACTGCACGACGACAAGCGTCGGTTTGGGTTATTTATTCCT
CTTTCGTTGTCTCGCGTCAAGTTGCTAACGTGTTGAGTGGTGAACTCAGG
TTTGACGGGCACCGTGAAGCGAACACATGTCAATGTTTCATCAGGAAACA
TCGCTTCACGCGCACCGTGAAACGAAGATATCGGTCAATCTCTCGGCAGG
GGACACTAACACTCTCTTGTGATTTTACCGAACGTATCACGTCTTGAGCA
GGTCCTCCACATCTCAAACGTCTCGAATAACGTACAGAGCGCCTTAAATC
ACTTGCACCTGGACGACCATGGCAGGCTTCCATTCGCCAGTTTTGAGGTA
TGATACTATGCGCACGGTAGAGCGTCTGAAAGTTGAGCCTAGTCACAGTC
TTGACCCATGAGTGTCATCGGGTGTGCGGAAAATGTCATGGTATTCATGC
CCCCGTTCCCCCTCTATTGTCAAGGAGGCATGTTTCTGATTAAATGCGCC
AAACAAATAGTATATATAACCCCCCCCTACTATCAGAACTCTCTGAGAGC
CAGGAAAGTGGGAATCATCAAGATAAGACATCAATTTCTGTGAGTAACTG
CACGCGTCTAGCTCGATCTGTATCACAGCAGTCGGGCCTGCCCCATACTG
CTCCGTTTGTTATCCAGTAATCTGCCTATACAGCAGGTATACTATCAAAC
ATGGCGTCGTCGGCAGGACACGTAGACCTAGATCGCGTGTACCCGCTCTC
TTTCACGAGCCAAGGCTACGATAGCTTCGGCGAGTGTTGTTGGTTGCTTT
CTCGTTTTCCTTTTCTCTTTCCTTTTTCCCTGATTTTTATTGCACTCTGT
TTGCATAAGTCTTTCAGAGAGTTCTTCACCGGCTCTGCCAACAGCCCGTG
CGGGGACCTTCCCACTCACCCACGAGTCTTGTAGACATGGTCGAGGTCCC
AGCCCCAGAGGGCACTGGCCGCGATGGTAGCGATGCTGGCGGTATGACGC
CTGCAGCAGTTTTCCTTGGACCACAACCAGCATACAAGCCTGGAGCTATG
TCAGCACACGGGGCTGAGGAAGCTACAGCAACACACGGGGCTAGGGAAGC
TACAGCAGCACTCGGGGCTGGGGAAGAGATCAGGCTGGGGTGAAACGCGT
CAGCAGCAGCGTGAGCGCTCGAGGGAGGGGTCAAGGTGAGGTCGAACGAG
TCAGGGGCCGAGGGGGGGGGCAAACAAGCGGTGGTGTACCGGTGGGAATT
TCGACACGTGCCACAAATTTGATCCAAATGCAGACAGGCAAACTGCTGCA
GGTGTCGTACCGCCAGCACCACTACCATCGCGGCCAGTACCCTCTTTCCA
GCAGAACCAGATGATCCGGTCGCGACGCTTGCCGGCTCTGTCCCTGCCGT
CTACTTGGCCGCCATCACACGCGCCCGATGGGCGGCGTTAACTGCGGCGC
TCCGCGGGGATATAGCCATGAAGGCCCCCCTGACCGTAAAAAAAGTGCAT
ACCCTGGACGAGGAGGCGTGCCTACACCGACAACGCCTGGAAGAGGAAGC
TTCCCGAGAAACCTATTTTGCCGCTACGTCCAGTCGCTTTCCCCTTCCGC
TCTTCGACCCTTCAGACATCGTCTCCTCTTCCAAGATGTCTACGATTCTT
CCCCACCCCATGGACGCCGTGGTCGACTTCGACGGGTCCGGCGACGACAC
GCCGGAGGAGCCCGTCATCCACCCTGCCGTCCATGCCCCCACGTACCGAC
CGGTGGCTAGTGATTTTCTCGACTTTTAGGCGGTCGATGGACCCGGTATT
GTCGTCCTCGGTGGCGTGGTAAGGAGGGGATTTTGAGGTGCAGTTGTTGA
GGACATACGGTGTTAGTCCCGCGGGGAGAAACCACGGAAGGTCGGAGCTG
TCGTGGGGGTTTGCGCAAGGCTTGCAGCAAACCACCGACACTAAGCAGGG
CGCGTCCGCGCCCGGCATGTCGTTGGGAAGGTCGAGGTAAAGGAGCTTGG
CGGTCAGAGGGCGACCGTCAAGCGTCGAATCCGCCGGGCAGCTCACCACT
GACCTCTTTCTTTCTTTCTTTCCCTTTTTTTTTCTTTTTTTTTCTTGCGC
TGCGTATCGCGTTTTTTACCTCGTGATACTCGACGCCCCCGTACTCGTAT
TGGTGATTTATTTCAGCGTATGACCGGCTGTCTGCCGACACTTGGAGCGT
TGCAGTTGTGGGACTATGCACCCCCGCGAACGCTTCCTCCCGTTTTTTTT
CTTCGGCTACCGCGTTCTTCTCCTCGGTTGCCCGCCTGTGTTCTCATTTT
TGTTTCAGCATGCTACGCGTCACCTCTGTGACGAGTTTTGTTCGGGCCAA
TGTTTTTCTCTCGGCTTAGTTTGCACTCTGCCTTGAGCCATTTTGGACTA
GTCACAACGTTGCGAATTTTGATATTCCTGCTGGCCGACGTTATTTTTCC
GGGAATTTTGTTTTTCGGCTTTTCTACCCCCCTGCCCCCCCCCCCGCTGT
CCCCCCCCCCGCGCCTTATCGCTAAGGAGTAGCAGGCAAAGCGTGCCCTA
TATCCCCGTTTTGGGAACACCGTCTTCTCGTCCTTTTTATTATTTTTTTT
CTTTTTTCCGCTTCGTATTCGTTCTCATTTCAGCATGATATGTGGCATTC
CACGCCCCCGGCTTCCCCTCTGATGTAGGGCCATAAGGTTGATCTTCACG
TACGTATTGGGTGTGTCTTCTTCGTCCCCTCTGTCTCGGAACGAACCCCC
CCTTCTTCTGATTTTTTTTTTTTTTTTCGAACTTGAGTTTTGGGTTCCTC
CGCGCCACCCTCGGTTGGGTGTGCTGCAAGTCGTTCCCGAAACTGTTTGG
CTACCTCTCGACTATCGAGCGCCCTTCTCTTTCCCACTTGGGCCGTGTGT
TCTCGTCGCCCATGTGCATCGTTCTCTACCGCTTTGCACCGTTCCACCAG
ACCACCGATTTTGGGATCACCCGTTGCGTATCATCCTTGGGTCTGGACTA
CCGTGCCCCTTCTAGTGTTTTGCCTCCGTTCCCCTTTTGGCATTTGACCT
GCGTACATCGGTTTGTTTTTCTATTTTTTTCTCGGTCTCCCCCCTATGGT
AGGTCGGAGTCCATACGTACGTGCTAGCACTTATTACGTCTCTCGAATTC
GAGCCGTTCTGTTTTCATTGTTTCTGTTCTTCGCGACCCTTTTCTTGCCA
CGTTGCATGCCGCGCATCTTTCGATTCCCCCCGTCTCTTTCGGGACAAAC
CTGCTTCCTGCCCTAGGATGCAGATTTTTGTTGGTTCAACCGGCTTTCAC
CTTGCAAATTATAGAGGTGTGAGAGTGAGTTGTGAAGCGTCGTATCTTCG
ATCCATTTCTCAGAATTTTCTGGATGGATTTTGCACCCTCCTGATTTTTA
TGCATCTGCACATACAGCCATAAAGGTGGGCTTGTGTCATGGTATTCATG
ACCCCCTTCCCTCTCCATTGTCGAAGAGGCGCGTTTCTGATGAAACGCGC
CAAACAAATAATACATGTAAAACCCCCCTGATTTCAGAACCCTCTGAGAG
CGAGGAAAGTGGGACATCAAGATAATACATCACTCTCTGTGAGTAACTGC
ACGCGTCTAGCTCGACCTACATTACAGTAGTCGGGCCTGCCCCATATCGC
CCCCTTTGTTCTCTGGTAATCTGCCTATACAACAGGTATACTATTAACAT
AAAAAAACTACAGCGCATCGTTGTGTCAGTGTTACGATATCACGGATTAA
GCGATGGAGCGTGTGTGTAGACAGGAGACGGGTGAATACATACCATAGGA
ACTGCCAGGGCTTTTCGCGTGTCAGGTCAAACCTCACGGGTCGGGTCGGG
TCGGGTCAGCTGACCCGACCCCACCCGCGAAAAATTTGAGGTGTGTTGAT
TTGACCCGACCCGACCCGCGAGATTTTGAAAGCCTCTTGACCCGACCCGA
CTCGACCCGCGAGACTTCAAAAACTGCTGGCCCGATCCGACCCGACCCGT
GAGATTTGAAAACCTCCTGACCCGACCCGACCCGACCCGCCACCTTTCGA
TTGACCCGCGAGACGGGTTTCATGCGGGTCGGGTCACCTTGACCCGCGAG
ACCATCTATCTTGACCCGCGGGTTCGACCCGTGGATCCAGCCCGTGGGTC
GACGCTTCAAAAACTATTATATACCTGGTACAGTACTCATTTTGTGCCCC
GTAGCTATAAATATGTTATGTGGCCTCGCTGTAGTGGGTATTGATGGATG
CGGACATGCGTATATGGATTTGGCGATGTTTTAATGTTTGAACATTATTA
TGCCAAAGAAGTCATATTGAGTATTATATTAGTACCAGAGAAGCCTTTGG
GTAAGAGCGCGAAGTGTTTGAAGCGTCGGGTCCGCGAGCCAGATGCGCGG
GTCCAACCCGCGGGTCAGCCAAAAACAACTCGCAGTTCATGCTGGTCCGA
CCCGCGTGTGATCCGTTTCTCGCGGGTCATGACCTGACCCGACCCGTGAG
CTTTTCGTCACCTCTTGATCCAACCTGACCCGACCCGTGAGAGTTGAAAA
AATCTTGAGCCGACCTGACCCGATTCGCGAGGTTTGAAAAACTCTTGATC
CGACCTGACCCGACCCGCGAGATTGAAAACGTCTTGATCCGACCCGACCC
GACCCGTGAGATTTTGAACAATTCCTGACCCGACCCGACCCATGACATTT
TGAACACCCTGTGGCCCGACCCGCGGGTCGGGTCATGACCCGTGAAAAGC
CTTGGAATCTTCCACCAGGCAGGGTCAACAATAGGGGGTGTGGCGATGCA
CTTTTTTTCGTCAGATTTCGCTTAGCGCACCACGCCCTAGAGGCAATGTG
CGGCTTGCGGCATTGGTAATTTCAAGGGCCGCACCCTTTTTCGAATAATA
CCGGTATATATTCGAAATAAAAATATTGTTCCTCACTTTTTGCCGCAGGC
GAAAAACAATTTTTGGGGACCCTTTCTCCGAAGGCAAAAAAACGTTTCTT
CATCGACCGAAGACGTTACACATGCTTACTACTATAGTCGATATGCTTAC
CAGATACGGTTTATCTTAACTTTGTGCTTCTTTGCACCAAGCACGAGCCT
GACGGCCGCCTACTGTTACTACGAGACGGTGCAGTACAAGGAGTGGGTAA
CACGCACTTTTGTGTATAGGTACGCCTTTTATGTCCAATGTTTTGCCTCC
GGCGTTTGTTTTCCGTTGGGCCCTGGCGGGGGTCCGCACCACGCCCCGGC
CGCCTAATTAAAATTCTGCCACGAGGTATGCACTGCTGTGATGCAAGCGA
TCCTACCCTTTGAATGAGCGTGACAGCACTAGCCGCCTCGATATGAACGC
GATATCAGCTATCAGTACTATCGGCCTTGGTTTAGAGTACGATATCGACA
GCGCAGCCCAATGATGCGGCAAAGCCAGATTATACCTTGTGATGTGAGAG
AGCAACATCAGGCCAACTTGATGGACATGAATAGATTACACGAGTACAAA
TATTGATTACCGTCACGCCGATCGATGCTTCACTGGAATGTTACTTTGCA
CTATTAATAAATGTTGACCCCGGTGCCCCGCCCGCCCCGACTGCTGCTAC
TGCTCGATCGTGTACCTTGTCCCGCAGATCATGAACAAAGACTTTCCTCA
AGTGCTTTATCCTGTCTTTCGACTCCAGCAATCGACGCAACGAAGCATAC
TCGGCACCAAGTGGTGGAAACAAAAGGTGGCAAAACGCAGTACAGTAACA
CGTACCTGGTACGTAGCTAAATATAATATGAATCTATATTCGACTTTCCA
ATAAACTGAAAAGACCTAGGCAAAAATCACCAACCAACCGTGTTCTGGGC
GAGGTGGAGTATGGGAATCGCGCACCGTAAGCCCCGCCGGTAGAGTCAGA
ATGCAGCCAGCATTTCTGTGTCGATGCAACTACTGATTCACAGCTTCGTA
AGATAAGCCTATGCTGCCACGACAGAGCCACAGAGGGTGCACTCGGCATC
AGCAGCGCCCACCAGGACCGCCAGAGTCAGTAGTCGCATGGCATGCGCTG
GCAATTTGCGCCGGAGAGTGTAGTGGACACTATAAATACCAGCACCACTT
CTTACACCCACAGGAAGATAAGGAGATCAAAGTCAAAAGTCCTGGCCTAC
CCGATCACTCGCATGGAACATTGCTCACGAGTTTGCCTTCACCCGTGCTT
GTTTTTTTCCGGCTGCGTGGGTCATCGCAAAAATGAAAACGCAACATCCA
GATCAACGAGCTGGATTACTGGCGAGTGAACAGGCAGCACATGGAGCAGA
TGGAGAAGTTGAAAGAAGCCAAGAACCGGAAGAGACAACGAGATGCCCAG
ATTCGAAAAGGT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig7190:3874..11585+

>mRNA_M-pyrifera_M_contig7190.17126.1 ID=mRNA_M-pyrifera_M_contig7190.17126.1|Name=mRNA_M-pyrifera_M_contig7190.17126.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1416bp|location=Sequence derived from alignment at M-pyrifera_M_contig7190:3874..11585+ (Macrocystis pyrifera P11B4 male)
ATGGGTAATGCCCCCACTGGCCCTCCACCTCCTTCAGGGGGCAGAATTGT
TCGGTGCAAGGAGCTTTTTATGCATGGGTAATGCCCCCACTGGCCCTCCA
CCTCCTTCAGGGGGCAGAATTGTTCGGTGCAAGGAGCTTTTTATGCTCAA
GAAGGAGGACATTGAAGTGTTTTGGGAGATCTTCAAGCAGTTTGACCTCA
ATCAAGAAGGAGGACATTGAAGTGTTTTGGGAGATCTTCAAGCAGTTTGA
CCTCAAGCGCGAAGGGCTAATCAGCAGACAGGCGTTTTTTGAATGCATCA
TTCGGGAAGAACGGAATGAGTTCGGGAACGCCATATTTTCGCTCGTGGAT
CCTGAGGACGAAGAGACCCTTGAATTTGGGCGCGAAGGGCTAATCAGCAG
ACAGGCGTTTTTTGAATGCATCATTCGGGAAGAACGGAATGAGTTCGGGA
ACGCCATATTTTCGCTCGTGGATCCTGAGGACGAAGAGACCCTTGAATTT
GGCGAATTCGTCCAGGCTGTGTGCACATTCTGCTGCCTTTGCGTTACGGA
TATGCTCAAGTTTTGCTTCATGGTTTACGATAAAGACCGTTCTGGGCTGA
TGGAAATGGAAGAACTTCACCACTTCATCAAGGCAAGTGCTAAGTGCCCC
TCGCGAATTCGTCCAGGCTGTGTGCACATTCTGCTGCCTTTGCGTTACGG
ATATGCTCAAGTTTTGCTTCATGGTTTACGATAAAGACCGTTCTGGGCTG
ATGGAAATGGAAGAACTTCACCACTTCATCAAGGCAAGTGCTAAGTGCCC
CTCGGTCCTCCACATCTCAAACGTCTCGAATAACGTACAGAGCGCCTTAA
ATCACTTGCACCTGGACGACCATGGCAGGCTTCCATTCGCCAGTTTTGAG
GTCCTCCACATCTCAAACGTCTCGAATAACGTACAGAGCGCCTTAAATCA
CTTGCACCTGGACGACCATGGCAGGCTTCCATTCGCCAGTTTTGAGATCA
TGAACAAAGACTTTCCTCAAGTGCTTTATCCTGTCTTTCGACTCCAGCAA
TCGACGCAACGAAGCATACTCGGCACCAAGTGGTGGAAACAAAAGATCAT
GAACAAAGACTTTCCTCAAGTGCTTTATCCTGTCTTTCGACTCCAGCAAT
CGACGCAACGAAGCATACTCGGCACCAAGTGGTGGAAACAAAAGATCAAC
GAGCTGGATTACTGGCGAGTGAACAGGCAGCACATGGAGCAGATGGAGAA
GTTGAAAGAAGCCAAGAACCGGAAGAGACAACGAGATGCCCAGATTCGAA
AAGGTATCAACGAGCTGGATTACTGGCGAGTGAACAGGCAGCACATGGAG
CAGATGGAGAAGTTGAAAGAAGCCAAGAACCGGAAGAGACAACGAGATGC
CCAGATTCGAAAAGGT
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