mRNA_M-pyrifera_M_contig7183.17113.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig7183.17113.1
Unique NamemRNA_M-pyrifera_M_contig7183.17113.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig7183.17113.1 vs. uniprot
Match: D7G848_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G848_ECTSI)

HSP 1 Score: 315 bits (808), Expect = 1.600e-97
Identity = 169/268 (63.06%), Postives = 191/268 (71.27%), Query Frame = 1 
Query:    1 MGCS---GVAHLGEFVNLVREPRNPYDCNAIRVDNLATQQVGHIKATQACVLARILDDRRPSAPRVEAVVSVGGQRVFTLPIRVHVYGPPQGAVAAIASLRGLYLKGGMTGKPG--PSAGXXXXXXXXXPSVTVRTTTANPIKTQRELDEMFDKLDTDTPQLLTEEASAKTTPVLAKTLMQHQAEGLAWMLQRENKPDP------------------------TGLPPFWDRRVEGGKPVFHNTITCSSRPVQPASVHGGILSDDMGL 717
            +GC    GVAHLGEFV+LVREP NPYD NAIRVDNL  QQVGHIKATQAC+L+ ILDDR   APRVEA VSVGG RV+ LPIR +V+GPP+ A A IA+L  LYLKGGMTG+ G  P  G          +V V+T  +NP+KTQRELDEMFDKLD D+PQL T   SA T PVL  +LM HQ EGLAWM+QREN PDP                        +GLPPFW++RVEGGK VFHNTITCSS+P +PASVHGGILSDDMGL
Sbjct:   46 VGCRHYRGVAHLGEFVDLVREPNNPYDRNAIRVDNLTRQQVGHIKATQACILSPILDDRTNGAPRVEASVSVGGTRVYDLPIRANVFGPPERASATIAALGRLYLKGGMTGRHGSAPGGGSGASGSYKGHAVAVQTAISNPVKTQRELDEMFDKLDADSPQLPTANTSANTEPVLLASLMTHQKEGLAWMVQRENNPDPNGARLDDGKKXXXXXXGKGCQSHSSGLPPFWEQRVEGGKGVFHNTITCSSQPCRPASVHGGILSDDMGL 313
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BLAST of mRNA_M-pyrifera_M_contig7183.17113.1 vs. uniprot
Match: A0A7S1DN32_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DN32_HEMAN)

HSP 1 Score: 163 bits (412), Expect = 3.780e-44
Identity = 102/248 (41.13%), Postives = 133/248 (53.63%), Query Frame = 1 
Query:    1 MGC---SGVAHLGEFVNLVREPRNPYDCNAIRVDNLATQQVGHIKATQACVLARILDDRRPSAPRVEAVVSVGGQRVFTLPIRVHVYGPP--QGAVAAIASLRG-LYLKGGMT--GKPGPSAGXXXXXXXXXPSVTVRTTTANPIK-TQRELDEMFDKLDTDTPQLLTEEASAKTTPVLAKTLMQHQAEGLAWMLQRENKPDPTGLPPFWDRRVEGGKPVFHNTITCSSRPVQPASVHGGILSDDMGL 717
            +GC    G+ H GE+  LVREPRN YD NAIRVDN+  QQVGHIK  QA VLA ++DD  P  P +E  V+ GG  +F +     +YGP   Q  V       G L LKG  +  G PG  +G             VR+   +  + +Q+ LD+++D+L TD  QL T          L   L  HQ +G+AWML RE       LPPFW +  E G  V++N +T SS+   PA V GG++ DDMGL
Sbjct:  156 VGCRYYGGLLHEGEYAELVREPRNQYDRNAIRVDNMMAQQVGHIKKEQAAVLAPMIDDASPLKPWIEVEVNEGGTNMFQVSCTASIYGPVEYQEQVLRYVMASGVLRLKGNQSIPGSPGMGSGTGVTGTNSSNLSVVRSVKISSAEASQKSLDKLYDELKTDLSQLDTASVMKALQGKLLSPLFPHQQQGVAWMLSREAS---LSLPPFWSQVTEAGTTVYYNQVTKSSQSTAPAPVKGGLVCDDMGL 400
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BLAST of mRNA_M-pyrifera_M_contig7183.17113.1 vs. uniprot
Match: A0A7R9Y7S4_9VIRI (Hypothetical protein n=2 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9Y7S4_9VIRI)

HSP 1 Score: 168 bits (425), Expect = 6.440e-44
Identity = 101/246 (41.06%), Postives = 139/246 (56.50%), Query Frame = 1 
Query:    1 MGC---SGVAHLGEFVNLVREPRNPYDCNAIRVDNLATQQVGHIKATQACVLARILDDRRPSAPRVEAVVSVGGQRVFTLPIRVHVYGPPQGAVAAIASLR--GLYLKGG---MTGKPGPSAGXXXXXXXXXPSVTVRTTTANPIKTQRELDEMFDKLDTDTPQLLTEEASAKTTPVLAKTLMQHQAEGLAWMLQRENKPDPTGLPPFWDRRVEGGKPVFHNTITCSSRPVQPASVHGGILSDDMG 714
            +GC    G+AH GE+V LVREP NPYD NA+RVDN   +QVGHIK   A  L RILD      PRVEA +      +FT+P+ + +YG P      + +LR  G  L+ G   + G P  S                 +   NP + QRELDE+FDKL ++     T+  S    P L  +L +HQ  G+AWML RE +  P+ LP F++ R+E G+ VF+N++T +S   +P+ V GG+L+DDMG
Sbjct:  154 VGCRYYEGIAHAGEYVTLVREPNNPYDPNAVRVDNFDGKQVGHIKRGTAAALRRILDHTASGGPRVEATIPRDLSNIFTMPVTLALYGTPGDMSWVVENLRLAGHVLRRGGAALPGGPSGSGAYDSTEGGGGRGALGVSYEFNPARAQRELDELFDKLASEQEGASTD--SFVEPPQLTSSLREHQKRGVAWMLSRERQA-PSVLPTFFEERLELGRQVFYNSVTSTSTTARPSPVFGGLLADDMG 396
[Close]
BLAST of mRNA_M-pyrifera_M_contig7183.17113.1 vs. uniprot
Match: A0A830HVA9_9CHLO (Uncharacterized protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HVA9_9CHLO)

HSP 1 Score: 163 bits (413), Expect = 2.500e-42
Identity = 106/245 (43.27%), Postives = 148/245 (60.41%), Query Frame = 1 
Query:    1 MGC---SGVAHLGEFVNLVREPRNPYDCNAIRVDNLATQQVGHIKATQACVLARILDDRRPSAPRVEAVVSVGGQRVFTLPIRVHVYGPPQGAVAAIASLR--GLYLKGGMTGKPGPSAGXXXXXXXXXPSVTVRTTT--ANPIKTQRELDEMFDKLDTDTPQLLTEEASAKTTPVLAKTLMQHQAEGLAWMLQRENKPDPTGLPPFWDRRVEGGKPVFHNTITCSSRPVQPASVHGGILSDDMG 714
            +GC   SGVAH GE+V L REP NPYD NA++V N+   QVGHI  T A  LA+++D    + PRVE  +      VFT+P+ + +YG        + +++  G+ L+      P  ++GXXXXXXXXX     R T+  A+P K+QRELD +FD+L              + TP L   L +HQ +G+AWML RE +   T LPPF++ RVE G  V++N+ITCS++P +P  V GG+L+DDMG
Sbjct:   60 VGCRYYSGVAHRGEYVTLEREPHNPYDRNAVKVLNMNGMQVGHIPRTVATGLAKVMDVASLTPPRVEGTIPRDASNVFTIPVVIRIYGSAADRAWVVTTMKKAGIVLREDEA--PSGASGXXXXXXXXXXXXPARGTSYVADPAKSQRELDALFDELSKQVDISNLPYDPQRDTPALTANLRKHQRDGVAWMLSRERQAANT-LPPFFEERVERGTTVYYNSITCSTQPSRPPPVLGGLLADDMG 301
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BLAST of mRNA_M-pyrifera_M_contig7183.17113.1 vs. uniprot
Match: A0A7J8AF01_RHIFE (Helicase like transcription factor n=1 Tax=Rhinolophus ferrumequinum TaxID=59479 RepID=A0A7J8AF01_RHIFE)

HSP 1 Score: 133 bits (334), Expect = 1.360e-33
Identity = 93/244 (38.11%), Postives = 130/244 (53.28%), Query Frame = 1 
Query:   10 SGVAHLGEFVNLVREPRNPYDCNAIRVDNLATQQVGHIKATQACVLARILDDRRPSAPRVEAVVSVGGQRVFTLPIRVHVYGPPQGAVAAIASLRGLYLKGGMTGKP-------GPSAGXXXXXXXXXPSVTVRTTTANPIKTQRELDEMFDKLDTDTPQLLTEEASAKTTPVLAKTLMQHQAEGLAWMLQRENKPDPTGLPPFWDRRVEGGKPVFHNTITCSSRPVQPASVHGGILSDDMGLV 720
            +GV +  E V L REP NPYD NAI+V+N+   QVGH+K   A  LA I+D++     +VE VV  G    FT+P+ + ++G  +   A +  L+    K G   K        G S+G             V+ TT   +KT  E D++F+ L  D      E A A  TP+L      HQ + LAWM+ REN  +   LPPFW++R +    +++NTIT  S   +P +VHGGIL+DDMGLV
Sbjct:   74 TGVVNNNEMVALQREPNNPYDKNAIKVNNVNGNQVGHLKKDLAAALAYIMDNK---LAQVEGVVPFGANNAFTMPLLMSLWGKEENRKAVLDQLKKHGFKLGPAQKTLGFSLESGWSSGRAGPSYSMPVHAAVQMTTEQ-LKT--EFDKLFEDLKEDDKTHEMEPAEAIETPLLP-----HQKQALAWMVSRENSKE---LPPFWEQRSD----LYYNTITNFSEKDRPENVHGGILADDMGLV 299
[Close]
BLAST of mRNA_M-pyrifera_M_contig7183.17113.1 vs. uniprot
Match: A0A6P8IE89_ACTTE (helicase-like transcription factor isoform X1 n=3 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8IE89_ACTTE)

HSP 1 Score: 135 bits (341), Expect = 6.430e-33
Identity = 90/240 (37.50%), Postives = 126/240 (52.50%), Query Frame = 1 
Query:   10 SGVAHLGEFVNLVREPRNPYDCNAIRVDNLATQQVGHIKATQACVLARILDDRRPSAPRVEAVVSVGGQRVFTLPIRVHVYGPPQGAVAAIASLR--GLYLKGGMTGKPGPSAGXXXXXXXXXPSVTVRTTTANPIKTQRELDEMFDKLDTDTPQLLTEEASAKTTP--VLAKTLMQHQAEGLAWMLQRENKPDPTGLPPFWDRRVEGGKPVFHNTITCSSRPVQPASVHGGILSDDMGL 717
            SG  + GE V+L REP NPYD NAIRVDN+   QVGHIK T A  LA ++D R     R+E  V  G   V+++P  +  +G P+     I  +R  G  L      KP PS G          S+ +        +   EL+++FDK++        ++ +A+  P  V+   L  HQ + LAWM+ +EN  D   LPPFW+ R + GK  + NT T  +   +P+ V GGIL+DDMGL
Sbjct:   38 SGTVNRGEMVSLNREPHNPYDNNAIRVDNVFGVQVGHIKRTLAMPLASVIDRR---LVRLEGTVPYGQNNVYSMPCDLAFWGRPENQEQVIQIMRQYGFILLKAYNNKPAPSKGDYTNYSIPT-SIKISQD-----QMHNELNKLFDKME---EMDKGDKTAAEVEPAEVIKTKLYPHQKQSLAWMITKENNKD---LPPFWEERTKNGKKEYFNTATNYATTKRPSCVKGGILADDMGL 262
[Close]
BLAST of mRNA_M-pyrifera_M_contig7183.17113.1 vs. uniprot
Match: A0A5N4EMH0_CAMDR (Helicase-like transcription factor n=2 Tax=Laurasiatheria TaxID=314145 RepID=A0A5N4EMH0_CAMDR)

HSP 1 Score: 130 bits (328), Expect = 1.610e-32
Identity = 89/240 (37.08%), Postives = 128/240 (53.33%), Query Frame = 1 
Query:   10 SGVAHLGEFVNLVREPRNPYDCNAIRVDNLATQQVGHIKATQACVLARILDDRRPSAPRVEAVVSVGGQRVFTLPIRVHVYGPPQGAVAAIASLRGLYLKGGMTGKP-GPSAGXXXXXXXXXPSVTVRTTTANPIKTQR---ELDEMFDKLDTDTPQLLTEEASAKTTPVLAKTLMQHQAEGLAWMLQRENKPDPTGLPPFWDRRVEGGKPVFHNTITCSSRPVQPASVHGGILSDDMGL 717
            +GV +  E V L REP NPYD +AI+V+N+   QVGH+K   A  LA I+D++     ++E VV  G    FT+P+ +  +G  +   A +  L+    K G   K  G S           PS ++    A  + T++   E D++F+ L  D      E A A  TP+L      HQ + LAWM+ REN  +   LPPFW++R +    V++NTIT  S   +P +VHGGIL+DDMGL
Sbjct:   74 TGVVNNNEMVALQREPNNPYDKSAIKVNNVNGNQVGHLKKDLAAALAYIMDNK---LAQIEGVVPFGANNAFTMPLHMTFWGKEENRKAVLDQLKKHGFKLGPAPKTLGFSLESGWGSGRAGPSYSMPVHAAVQMTTEQLKTEFDKLFEDLKEDDKTHEMEPAEAVETPLLP-----HQKQALAWMISRENSEE---LPPFWEQRSD----VYYNTITNFSEKDRPENVHGGILADDMGL 298
[Close]
BLAST of mRNA_M-pyrifera_M_contig7183.17113.1 vs. uniprot
Match: A0A7J8A6M1_PIPKU (Helicase like transcription factor n=1 Tax=Pipistrellus kuhlii TaxID=59472 RepID=A0A7J8A6M1_PIPKU)

HSP 1 Score: 132 bits (331), Expect = 2.820e-32
Identity = 92/250 (36.80%), Postives = 130/250 (52.00%), Query Frame = 1 
Query:   10 SGVAHLGEFVNLVREPRNPYDCNAIRVDNLATQQVGHIKATQACVLARILDDRRPSAPRVEAVVSVGGQRVFTLPIRVHVYGPPQGAVAAIASLR-------------GLYLKGGM-TGKPGPSAGXXXXXXXXXPSVTVRTTTANPIKTQRELDEMFDKLDTDTPQLLTEEASAKTTPVLAKTLMQHQAEGLAWMLQRENKPDPTGLPPFWDRRVEGGKPVFHNTITCSSRPVQPASVHGGILSDDMGL 717
            +GV +  E V L REP NPYD NAI+V+N+   QVGH+K   A  LA I+D++     +VE VV  G    FT+P+ + ++G  +   A +  L+             G  L+ G  +G+ GPS           P       T   +KT  E D++F+ L  D      E A A  TP+L      HQ + LAWM+ REN  +   LPPFW++R +    +++NTIT  S   +P +VHGGIL+DDMGL
Sbjct:   75 TGVVNNNEMVALQREPNNPYDKNAIKVNNVNGNQVGHLKKELAAALAYIMDNK---LAQVEGVVPFGANNAFTMPLHMTLWGKEENRKAVLDQLKKHGFKLDPAPKTFGFSLESGWGSGRAGPS--------YSMPVHAAVQLTTEQLKT--EFDKLFEDLKEDDKTHEMEPAEAIETPLLP-----HQKQALAWMISRENSKE---LPPFWEQRSD----LYYNTITNFSEKDRPENVHGGILADDMGL 299
[Close]
BLAST of mRNA_M-pyrifera_M_contig7183.17113.1 vs. uniprot
Match: A0A1U8CJD7_MESAU (helicase-like transcription factor isoform X3 n=1 Tax=Mesocricetus auratus TaxID=10036 RepID=A0A1U8CJD7_MESAU)

HSP 1 Score: 134 bits (337), Expect = 3.580e-32
Identity = 91/240 (37.92%), Postives = 128/240 (53.33%), Query Frame = 1 
Query:   10 SGVAHLGEFVNLVREPRNPYDCNAIRVDNLATQQVGHIKATQACVLARILDDRRPSAPRVEAVVSVGGQRVFTLPIRVHVYGPPQGAVAAIASLRGLYLKGGMTGKP-GPSAGXXXXXXXXXPSVTVRTTTANPIKTQR---ELDEMFDKLDTDTPQLLTEEASAKTTPVLAKTLMQHQAEGLAWMLQRENKPDPTGLPPFWDRRVEGGKPVFHNTITCSSRPVQPASVHGGILSDDMGL 717
            +GV +  E V+L REP NPYD NAIRV+N+   QVGH+K   A  LA I+D++     +VE VV  G    FT+P+ +  +G  +     +  L     K G T K  G S           PS  +    A  + T++   E D++F+ L  D+     E + A  TP+L      HQ + LAWM+ REN  D   LPPFW++R +    +++NTIT  S   +P +VHGGIL+DDMGL
Sbjct:   74 TGVVNNNEMVSLQREPNNPYDKNAIRVNNVNGNQVGHLKRDLAAALAYIMDNK---LAQVEGVVPYGANNAFTMPLHMTFWGKEENRKVVLNQLMKHGFKLGPTPKTLGLSLESSWSSGRAGPSYNMPAHVAVQMTTEQLKMEFDKLFEDLKEDSKTNEMEPSEAIETPLLP-----HQKQALAWMISRENSKD---LPPFWEQRND----LYYNTITNFSEKERPENVHGGILADDMGL 298
[Close]
BLAST of mRNA_M-pyrifera_M_contig7183.17113.1 vs. uniprot
Match: A0A1U7QUZ3_MESAU (helicase-like transcription factor isoform X2 n=1 Tax=Mesocricetus auratus TaxID=10036 RepID=A0A1U7QUZ3_MESAU)

HSP 1 Score: 134 bits (337), Expect = 3.590e-32
Identity = 91/240 (37.92%), Postives = 128/240 (53.33%), Query Frame = 1 
Query:   10 SGVAHLGEFVNLVREPRNPYDCNAIRVDNLATQQVGHIKATQACVLARILDDRRPSAPRVEAVVSVGGQRVFTLPIRVHVYGPPQGAVAAIASLRGLYLKGGMTGKP-GPSAGXXXXXXXXXPSVTVRTTTANPIKTQR---ELDEMFDKLDTDTPQLLTEEASAKTTPVLAKTLMQHQAEGLAWMLQRENKPDPTGLPPFWDRRVEGGKPVFHNTITCSSRPVQPASVHGGILSDDMGL 717
            +GV +  E V+L REP NPYD NAIRV+N+   QVGH+K   A  LA I+D++     +VE VV  G    FT+P+ +  +G  +     +  L     K G T K  G S           PS  +    A  + T++   E D++F+ L  D+     E + A  TP+L      HQ + LAWM+ REN  D   LPPFW++R +    +++NTIT  S   +P +VHGGIL+DDMGL
Sbjct:   74 TGVVNNNEMVSLQREPNNPYDKNAIRVNNVNGNQVGHLKRDLAAALAYIMDNK---LAQVEGVVPYGANNAFTMPLHMTFWGKEENRKVVLNQLMKHGFKLGPTPKTLGLSLESSWSSGRAGPSYNMPAHVAVQMTTEQLKMEFDKLFEDLKEDSKTNEMEPSEAIETPLLP-----HQKQALAWMISRENSKD---LPPFWEQRND----LYYNTITNFSEKERPENVHGGILADDMGL 298
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7183.17113.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G848_ECTSI1.600e-9763.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1DN32_HEMAN3.780e-4441.13Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A7R9Y7S4_9VIRI6.440e-4441.06Hypothetical protein n=2 Tax=Prasinoderma colonial... [more]
A0A830HVA9_9CHLO2.500e-4243.27Uncharacterized protein n=1 Tax=Pycnococcus provas... [more]
A0A7J8AF01_RHIFE1.360e-3338.11Helicase like transcription factor n=1 Tax=Rhinolo... [more]
A0A6P8IE89_ACTTE6.430e-3337.50helicase-like transcription factor isoform X1 n=3 ... [more]
A0A5N4EMH0_CAMDR1.610e-3237.08Helicase-like transcription factor n=2 Tax=Laurasi... [more]
A0A7J8A6M1_PIPKU2.820e-3236.80Helicase like transcription factor n=1 Tax=Pipistr... [more]
A0A1U8CJD7_MESAU3.580e-3237.92helicase-like transcription factor isoform X3 n=1 ... [more]
A0A1U7QUZ3_MESAU3.590e-3237.92helicase-like transcription factor isoform X2 n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7183contigM-pyrifera_M_contig7183:776..7307 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score318.5
Seed ortholog evalue2.7e-84
Seed eggNOG ortholog2880.D7G848
Preferred nameHLTF
KEGG koko:K15711
Hectar predicted targeting categoryother localisation
GOsGO:0000976,GO:0000977,GO:0000978,GO:0000981,GO:0000982,GO:0000987,GO:0001012,GO:0001067,GO:0001077,GO:0001228,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0006139,GO:0006351,GO:0006355,GO:0006357,GO:0006366,GO:0006464,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016070,GO:0016462,GO:0016567,GO:0016740,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0019787,GO:0019899,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031625,GO:0031974,GO:0031981,GO:0032446,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043565,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044389,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045893,GO:0045935,GO:0045944,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0061630,GO:0061659,GO:0065007,GO:0070013,GO:0070647,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0140096,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901576,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141
EggNOG free text desc.helicase activity
EggNOG OGsCOG0553@1,KOG1001@2759
Ec32 ortholog descriptionSNF2-related and RING/FYVE/PHD-type zinc finger protein
Ec32 orthologEc-12_001510.1
EC2.3.2.27
COG Functional cat.KL
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03400,ko04121
Exons5
Model size741
Cds size741
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7183.17113.1prot_M-pyrifera_M_contig7183.17113.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig7183 776..7307 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816614.0275722-CDS-M-pyrifera_M_contig7183:775..9301622816614.0275722-CDS-M-pyrifera_M_contig7183:775..930Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7183 776..930 -
1692278078.134327-CDS-M-pyrifera_M_contig7183:775..9301692278078.134327-CDS-M-pyrifera_M_contig7183:775..930Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7183 776..930 -
1622816614.039178-CDS-M-pyrifera_M_contig7183:3184..33501622816614.039178-CDS-M-pyrifera_M_contig7183:3184..3350Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7183 3185..3350 -
1692278078.145927-CDS-M-pyrifera_M_contig7183:3184..33501692278078.145927-CDS-M-pyrifera_M_contig7183:3184..3350Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7183 3185..3350 -
1622816614.053312-CDS-M-pyrifera_M_contig7183:4314..44381622816614.053312-CDS-M-pyrifera_M_contig7183:4314..4438Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7183 4315..4438 -
1692278078.1549923-CDS-M-pyrifera_M_contig7183:4314..44381692278078.1549923-CDS-M-pyrifera_M_contig7183:4314..4438Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7183 4315..4438 -
1622816614.0689466-CDS-M-pyrifera_M_contig7183:6189..63741622816614.0689466-CDS-M-pyrifera_M_contig7183:6189..6374Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7183 6190..6374 -
1692278078.1649525-CDS-M-pyrifera_M_contig7183:6189..63741692278078.1649525-CDS-M-pyrifera_M_contig7183:6189..6374Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7183 6190..6374 -
1622816614.081242-CDS-M-pyrifera_M_contig7183:7196..73071622816614.081242-CDS-M-pyrifera_M_contig7183:7196..7307Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7183 7197..7307 -
1692278078.179243-CDS-M-pyrifera_M_contig7183:7196..73071692278078.179243-CDS-M-pyrifera_M_contig7183:7196..7307Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7183 7197..7307 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig7183.17113.1

>prot_M-pyrifera_M_contig7183.17113.1 ID=prot_M-pyrifera_M_contig7183.17113.1|Name=mRNA_M-pyrifera_M_contig7183.17113.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=247bp
MGCSGVAHLGEFVNLVREPRNPYDCNAIRVDNLATQQVGHIKATQACVLA
RILDDRRPSAPRVEAVVSVGGQRVFTLPIRVHVYGPPQGAVAAIASLRGL
YLKGGMTGKPGPSAGGGTTTGGGGPSVTVRTTTANPIKTQRELDEMFDKL
DTDTPQLLTEEASAKTTPVLAKTLMQHQAEGLAWMLQRENKPDPTGLPPF
WDRRVEGGKPVFHNTITCSSRPVQPASVHGGILSDDMGLVRFAPFA*
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mRNA from alignment at M-pyrifera_M_contig7183:776..7307-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig7183.17113.1 ID=mRNA_M-pyrifera_M_contig7183.17113.1|Name=mRNA_M-pyrifera_M_contig7183.17113.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=6532bp|location=Sequence derived from alignment at M-pyrifera_M_contig7183:776..7307- (Macrocystis pyrifera P11B4 male)
ATGGGGTGCAGTGGTGTGGCGCACCTGGGGGAGTTTGTCAACCTCGTGCG
GGAGCCCAGGAACCCCTACGATTGTAACGCCATTCGGGTGGACAACCTCG
CCACGCAGCAGGTGCGCGCTTCTGGCAACGTTGCCCGTATTTTTGTGCGG
GCTGGAGATTTGTGTTGCACCGATGGACCCCTTGGGAGGGGGGAGAATCA
CCGACGTCGAGGTGGTTCGAATATACCGACGGGTGGGTGTTTCGACGAAC
GACCGTTTTGTCTGTTACTTTTGTCGTATGTAGGGTGTTGTGGTCGGTTG
GCCTCTCATTAGCGGACGCAATGGATCAAGGTCGTGTTTTTTTATCCAGC
GGCTCGATGAAAATTGTTCGTGTGAGCGCGCCGGGCGCCGGGATCCCTAT
ACGGGTGCTGCCCCGTGCGCCACCAGAAGGCAGGAGTGAACCCTCCTGCT
CCCTAACTCTCCATCCATCAAGCCTGCCGGTTCCATGTCATGGTCGGCGC
TACGACAGGCTTACGGCATAGCCATCAGTGCGCTGGCTGATAGCCAAATT
GAGCAGAACCAACTAATTCCAACCTAACGCAACCCCTCCTCCTCCCCACC
TCTCCATCGCTCAAGCCTGTCGCTTTCATGCCATGGTCAGCGCTACAAGA
GGCTTGCAACATGGACTTCCAAGGCGCTGGTGTCCGAATCGAAATAAACT
AGCCCCTAACCCGACCCAACCCAACCCGAACCATCCCAGCCCAACCCAAA
CCAACCCAATCCAACCTATAACCCAACCCAACTCAAACAAACCCCACCCC
AACCCAATCAAACCCAGCCAAACCCAACCCAACCGAAGCTATTTCGCGGT
GTAGGTCATCTCCCGCCAATCCCTCGACCCTGTGTCTGCAACCTCTCCCC
CGCCGCCCTGTGAACGTCCTTTCAACATAAAAGGTAGGCCACATCAAGGC
TACGCAGGCCTGCGTCCTAGCCCGCATCCTCGACGACCGCCGCCCCTCGG
CTCCCCGCGTGGAGGCCGTCGTGTCCGTTGGAGGCCAGCGGGTGTTCACC
CTTCCCATCCGGGTGCATGTATATGGCCCTCCCCAGGGCGCGGTGGCAGC
GATCGCTTCCCTTAGAGGGTAAGCCAAGCCACGTTGCGCGAGCGCACGCC
CATGCCCCGTATGTATGTATCGACTCGAAAAATGAACTAGCCACTACTTA
CGAGTGCGGTGTTGTATTTATCGTCTCCTGTTCGTTTTTAATGAATTACC
CACTACTACCTGGTACCTGATATTTTTGCTTGGCCTGGCGAACCGATCCT
GTCTCGCGACAATAGTGCCGCTGAATTGAATGATATACGTAGTCGATCGG
GCTACTAGTTGAATTTTCGTGTCTGAGTGAAGCTACGTAGATGCCTTGGT
ACTAATTATACTTTTCTGTCTACGCAAGGCAACGTAGACATTAGGGCTAC
TATTTTATTACTCGTGTGTCTGAGTAAGACTACGTAAACAAATGGCTAGT
GTGTATGTAGACGCATCTGTTTGAGTATAGCTACGTAGACGTGTTGCAAC
TATTTATTTTTTCCTATCTGGTTAAGGCGACGTAGGCATTGGGGCTGTTG
CTTGGACTTATCTGTCCAGTAAGACTACGTAGACATAGGGCTACTATTGA
TACGAATATGTCTTGAGTATAGCTACGTAGACAAAGGGCTACTACAGTAG
TCAGACTTGTCTGTCTGAGCTATTTAATAAGCTATGTACATAGCCACGCG
GGGGGTAGCAGGAGGGCCCGTAAACACGACTACCGCGTGGGTTCCCCTGC
GAAATCGACCCTCTCTGCTGTTGTTTGTACGCGTCGACCCCCCCCGCCTG
GCCAACTAATGTAGTCCGTATTATATTCAAGGTTCCCCTTCGGGATCGTG
TCGCAGGGAGAACTAGGAGAACACAGCAGGCGTTCGTTCCTCGTACGAGC
TACGTACTCGTGCGTAGCCACCGAGCAAGAACGGAGATAAAAAACCTTGG
AAAGCTGAAGAGCAAAGAAATAGCCACACACAGGGCAAGTAACCGGGCAA
GGAACACCGACCGACCAGCCCAAACGAGTTTGTAGTTGGTTTTGTTGGTT
GGGTTGGCACCGTTTGGCAACGAATATGGAAAACACGCCAATCACTTCTT
GAGCTCCTGCAGTTGTAGACAAGAAGGGTACTTTTTTTCGGCGGGCTTTT
GGCCGCCACCATGACTGGCGGTCGAGTGAGATCATTCGTGCGGGGTGAAG
AACCTTAAGTCCGCACCAGGGGGATGATCATATCATGCAGTGTGCATGTG
GTACGGCACCCACACGTCAGTTACGTAGCATACAGATTGCTGCACCTTGA
AGTGACCACACCATGAAAAAAAGAAAAAAAAAAGTATTCGACGCTGTCAT
CCATGTGCAAGAAAGTCTGCCTCACAAGCGATTCTTGGTAGGATACAGCT
CAACCTTCATGCGACTCGCCCAACACCTCACGGCGCTTCGCGCTTGGTGC
AAGAAATGCCTTTCTGGTCGGCGAAAACGCGACGTGCTCCGTCCCGACAT
GTAGGGACGCGAGGGTCTATGGCATTACGACTACGGCCATGCATGACTTA
AATAATACCCCCCCGCTGACCCCCCTCCCCTGGTTTCCCCAATGGCCCCG
AGGTCGGTATGCAAGCTTTTGTTTTCGTCCTTGCACTGCTGTCCCACGGT
TTTGGCGCCCGACATGTATTGGCCTCCACAGTGGTACTACTGGAAACCCC
GACGGTCTTTTGACGCAATTATCACTCACTTTTTGGTACCGTCCGTTGTT
GCCGTTCGTGTGGCGGATCAACTCATTTTCGTCCGAAAAACAATATTTTA
TTTATGCATTGTGGAGCAGTTTGTACCTCAAGGGTGGCATGACGGGAAAG
CCCGGACCATCGGCTGGAGGCGGTACTACGACGGGGGGCGGGGGGCCGTC
GGTGACCGTGAGGACCACGACCGCGAACCCGATCAAGACGCAGGTGATGA
GGGTTAGAGGTCGTGGATGCGATGTACCGATCGATGTGCACACTACTGTA
GTGGTTCGTTGTTGATGTAGCCCTCTTTTTTGGTTCGATGCGTAGGGTGT
TTAGATGGAGATGCCTGGTACCAGGTACGATTTACGGGTCTATGTGGTCT
ACCGATCGATCTAGTTCGACGTTGATACATCGAGGGAGATAAATTGTGCA
CGGTTATGATTGTGTGTGGTGTATCGATATGATGTACCTGGCACGTACTC
GTGGTTGGGTGCGACCCGTCGTACTTCGAAGACCTAGTAGGTTTTGTTTT
TTTTCGTTCTCGTTGTCCATCTCTTGCTCAACAAAACCCGGCACCTAAAC
GTTTTACGCCTCCCCTCTCCCTCGACCTGCTGGCCCGATTGCCCGGGTCA
CGATAAGATCGCGTGATTTAACCCAGCACTTGTGCCTTGCCCTTGCCGGA
GACGGCTTACGTTGTGGTGGACACGTCTTGCGCCACCACTCGCTCCGCTG
TAGTTGCAGCTGTAGCTGTAGTTGCAGTTGCCCTTGCAGTTGCACGTCCA
GCTGAAACTGCAAGGGCAACTGCAGGGCTCAGGATGAAAGCGCACGTGTA
CATACGACTCGTGCCTCCGTTGTTTTAAATGATGGGAACCTTTTGCAACG
ATTGTTTTTTTGCGTGAATCTAGCTGCTCCTGTTTGGGGATGCGAGGGTC
TATGGCCATACGACTACGGCCATGCATGATAATGAGTACACCCCCCCCCC
CTCCGCCGCCGCTACGATCGCCCTGATTTCATGCACTCTTTATCGTCATA
CTACGAAGTAGCAATTCCGAGTATAACCCTTTCAATCATGAGAACGAGAC
ACGCCTCTTTGTATCTGCAGGTAGTCCCGTCGCATACTGGCTTGCCGCGT
TGCGTCGTTTATTTTGTTGTTTGTGTTTTTTTTGTGTTCGCCGAAAAAAT
TGGGCAGAGGGAGTTGGACGAGATGTTCGACAAGCTCGACACGGACACGC
CGCAGCTGCTGACGGAAGAGGCGTCCGCCAAGACGACTCCAGTCCTCGCG
AAGACCCTCATGCAGCACCAGGCGGAAGGCCTGGCGTGGATGCTGCAGAG
GGAGAACAAACCCGACCCCACCGGTGAGCGAAGATACCACATGCCAGTCT
GTCCGGGAATATAACAACCATTTGGTGGTCATACCAGACTTCTAATGGGC
ATTATATTTCCGGCCAGCGTGTTATAATGGGAGACAGCGGTTTGACCCGT
TAACTGACCTCCCGCTAGACTATAGCTAGTATAAATAAGGCCAGAAGAGG
CCGTGACGCGTCCAAACTTGCACGACGTGGGCATAAACAAAATAGTGTGG
AGACTTTGAACTATGTACGTACGTATCAGCAAAGCCTACAAGGTGTTGAC
AACCTCTTAATTCGGTTCGTCTAGCATTGTGCTACGTTGTTAACGTCTCC
ACAAGGTCTTTTATACGCCCACATTGTGCAAGGGGGGGGGGGATCCCGGC
CACCTGTGAAACATCGGTCTTGACTGACCGCCCCCTACACTATCAATAGT
ATGTTAAGGTCAATAGGGACCTTGACGCGTCCCGAAATACCTGTCTTAAC
TGACCGCTCCCACACTATAGCTGGTATGTTAAGGCCACAATAGAGCTTGA
CGCGTAATAAAAACGGTATTGACTGACGGCCCCCTTTCACTAGATAGTAG
TGTGTTCAGTCAAATGTAGACCCTGGCGCGTCCTAAAAGACCGGTCTTGA
CTGACCGCTCGCACATTATACCTAGCATGTTAAGGCCAAAAGAGGTCTTG
ACGCGCCCAAAAAGACCGGTATTGACTGACCGCCATCTACACTCTAAACT
AGTATGCCAAGGCCACAACTGGCCTTGATGCGTCCTATAAGACCGGTCTT
GACTGACGGCCCTCTTTCACTACAGTATATAGTGGTGTATTGAGGCAAAA
GTAGACCTTGACGCGCCCGAAAAGACCGGTCTTGACTGACCGCCATCTAC
ACTACAAATAGCATGTCAAGGCCACGAGAGGTCTTGACGCGTCCCGAAAG
ACCATTCTTGACTGGCCGCTCACCCCCTACACTATAGCTAGTAAGTCGAG
GCCACAAGAGGCACTGAGGCGCCCGAAAAGACCGTTCTTCCTATTTCATT
GATGGCATCTTTACCAATGAGGAGGATCGACGTCGGCGGAGATGCAATTG
CAGTCGGGGTTGAACTTGAAGTTGGACCTAGCGTCGAAACTGGATTTGAA
TCTTAGGTCGTAGTTGGAGTTGAGGCTCGGGTCATCGTTAGAGTTGAGTC
TCGAGTCGCAGTTGAGGTTGAAGCTTGAGTCATACTTGGAGTTGAGTCTC
GAGTCATAGTTGGAGTTGGGCGTCGAGTCGTAGTTGAGGTTGAAGCTGGC
GGCTATAGGTCGTCGTGATTGAAGCTGAAATGGACGTCTTGAAGTTGTTT
TTTTCAAATTTAAAGCTTATATTTTTCAAGTTGTATATATACCCGAGGTT
GTAGCCGATGTTGAAGTTCAAACCGAAGTGTGAAAAGTTGAAGCCGATGT
TGAAGTTGAAGACGAGGTTGAATTATGAGCCAAATTTGAAGTTTAAGTCG
ATCTTAAAGTTGAAGCCGACGTTGAAGTTGAAGCTGATGACGGAGCCGAT
GTTGAAATTTGAATCGATATTAAAGTTGAATCTGATGTTGAAGTTGGAGC
CGATGTCGAAGCTGTAGCCGACACCAAAGTTGAATCCGCCCTTGCACTTG
AAACTGGAGTCCCAGTTGAACCTACGTTCGGACTTGGAGCCGAAGAATTG
AGAGATCGCATCGATCGCTCGCTCCGACGCATAGCTGCGCAGCATGATCT
CGCGCCTCCGCTCAAACCCGCCCGGCCTCGCTCGTTCTTTCGAATGCGCA
CGCTATTCTACTGTTTTGGCGTCGATGTCTCCTAGCGTTTCGCGAAAACG
TTGTGCTCTTCAGCCCAACACCAGTCGGGTTGCGTGGATAGGGACAAGGG
GACTGGAGGCTGCCGGACTTGCCGTGCCGCCGTGGTACCTTGCATCCTGG
CAGTCGCAGACTCTGGGCAAGGCCCTTTCGCTTGACACGCTCACTCTTCT
TCCGCGACCAGGGCATTTTTCGGTGCTCGCCTCGGCTCTAGTTAACGTCG
CGGTGATGGCGTGCGTCGGTGTGTGCCATGGGCTAGCGGCGGCCGTTTCA
AGTTTGCCATGGCCTTTTCTTACTTGCAACGACCGTTTCACGTCCGCGAC
AACCGTTTCATATTTGCGAAGATGGTTTCATATCCGGCACAACCATTTCA
CGTCCACGAGGACCGTTTCATCTCCACGACGACCGTCTGCCCCCCCCCCC
TTCCCCCCTCCGGGCCGGAGAGAACAGGCCTTCCACCTTTCTGGGACAGG
CGTGTTGAGGGCGGGAAGCCTGTTTTCCACAACACCATCACCTGCTCCTC
CCGGCCTGTCCAGCCCGCCTCCGTTCACGGCGGCATTCTCAGCGACGACA
TGGGCTTGGTGAGATTTGCTCCCTTTGCTTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig7183:776..7307-

>mRNA_M-pyrifera_M_contig7183.17113.1 ID=mRNA_M-pyrifera_M_contig7183.17113.1|Name=mRNA_M-pyrifera_M_contig7183.17113.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1482bp|location=Sequence derived from alignment at M-pyrifera_M_contig7183:776..7307- (Macrocystis pyrifera P11B4 male)
ATGGGGTGCAGTGGTGTGGCGCACCTGGGGGAGTTTGTCAACCTCGTGCG
GGAGCCCAGGAACCCCTACGATTGTAACGCCATTCGGGTGGACAACCTCG
CCACGCAGCAGATGGGGTGCAGTGGTGTGGCGCACCTGGGGGAGTTTGTC
AACCTCGTGCGGGAGCCCAGGAACCCCTACGATTGTAACGCCATTCGGGT
GGACAACCTCGCCACGCAGCAGGTAGGCCACATCAAGGCTACGCAGGCCT
GCGTCCTAGCCCGCATCCTCGACGACCGCCGCCCCTCGGCTCCCCGCGTG
GAGGCCGTCGTGTCCGTTGGAGGCCAGCGGGTGTTCACCCTTCCCATCCG
GGTGCATGTATATGGCCCTCCCCAGGGCGCGGTGGCAGCGATCGCTTCCC
TTAGAGGGTAGGCCACATCAAGGCTACGCAGGCCTGCGTCCTAGCCCGCA
TCCTCGACGACCGCCGCCCCTCGGCTCCCCGCGTGGAGGCCGTCGTGTCC
GTTGGAGGCCAGCGGGTGTTCACCCTTCCCATCCGGGTGCATGTATATGG
CCCTCCCCAGGGCGCGGTGGCAGCGATCGCTTCCCTTAGAGGTTTGTACC
TCAAGGGTGGCATGACGGGAAAGCCCGGACCATCGGCTGGAGGCGGTACT
ACGACGGGGGGCGGGGGGCCGTCGGTGACCGTGAGGACCACGACCGCGAA
CCCGATCAAGACGCAGTTTGTACCTCAAGGGTGGCATGACGGGAAAGCCC
GGACCATCGGCTGGAGGCGGTACTACGACGGGGGGCGGGGGGCCGTCGGT
GACCGTGAGGACCACGACCGCGAACCCGATCAAGACGCAGAGGGAGTTGG
ACGAGATGTTCGACAAGCTCGACACGGACACGCCGCAGCTGCTGACGGAA
GAGGCGTCCGCCAAGACGACTCCAGTCCTCGCGAAGACCCTCATGCAGCA
CCAGGCGGAAGGCCTGGCGTGGATGCTGCAGAGGGAGAACAAACCCGACC
CCACCGAGGGAGTTGGACGAGATGTTCGACAAGCTCGACACGGACACGCC
GCAGCTGCTGACGGAAGAGGCGTCCGCCAAGACGACTCCAGTCCTCGCGA
AGACCCTCATGCAGCACCAGGCGGAAGGCCTGGCGTGGATGCTGCAGAGG
GAGAACAAACCCGACCCCACCGGCCTTCCACCTTTCTGGGACAGGCGTGT
TGAGGGCGGGAAGCCTGTTTTCCACAACACCATCACCTGCTCCTCCCGGC
CTGTCCAGCCCGCCTCCGTTCACGGCGGCATTCTCAGCGACGACATGGGC
TTGGTGAGATTTGCTCCCTTTGCTTGAGCCTTCCACCTTTCTGGGACAGG
CGTGTTGAGGGCGGGAAGCCTGTTTTCCACAACACCATCACCTGCTCCTC
CCGGCCTGTCCAGCCCGCCTCCGTTCACGGCGGCATTCTCAGCGACGACA
TGGGCTTGGTGAGATTTGCTCCCTTTGCTTGA
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