mRNA_M-pyrifera_M_contig71421.17028.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig71421.17028.1 vs. uniprot
Match: A0A397A0U0_9STRA (ATP-grasp domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397A0U0_9STRA) HSP 1 Score: 320 bits (820), Expect = 4.720e-103 Identity = 158/241 (65.56%), Postives = 184/241 (76.35%), Query Frame = 1 Query: 1 RILAVDCGIKYNMIREFLARDCVVKVVPWDHDIVAEQEWYDGLFISNGPGDPAVCAPLISNLSTVLSSPTPKPTFGICLGNQLVGIAAGCSSYKLPFGNRGQNQPVLNALTGEAFITPQNHGFAIDASKLEGTEWVELFRNANDGTNEGVMHRSKPFFTAQFHPEAHGGPVDTTFLFDMFLDTI---ETKSATTVVPKPRPSAQRIRPKKVLILGSGGLSIGQAGEFDYSGAQAIKALKEE 714 +ILAVDCGIKYN+IRE + R VKVVPWDHDI +E WYDGLFISNGPGDP+ + L V+ S KP FGICLGNQL+G AAG +YKLPFGNRGQNQPV N TG+++IT QNHG+A++ L TEW ELF N NDGTNEG++H++KPFFTAQFHPE GGP DT FLFD FLD + ET T++V RP +R + KVL+LGSGGLSIGQAGEFDYSG+QAIKALKEE Sbjct: 210 KILAVDCGIKYNIIRELVKRGAEVKVVPWDHDIASEASWYDGLFISNGPGDPSTLTQTVEQLKKVIHSDVVKPIFGICLGNQLLGRAAGAGTYKLPFGNRGQNQPVNNLKTGQSYITSQNHGYALEGHDLP-TEWEELFVNGNDGTNEGIIHKTKPFFTAQFHPEHAGGPTDTAFLFDTFLDAVRAKETGPITSLVQ--RPVVERPKFNKVLVLGSGGLSIGQAGEFDYSGSQAIKALKEE 447
BLAST of mRNA_M-pyrifera_M_contig71421.17028.1 vs. uniprot
Match: A0A067CER5_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CER5_SAPPC) HSP 1 Score: 328 bits (841), Expect = 4.370e-102 Identity = 158/239 (66.11%), Postives = 188/239 (78.66%), Query Frame = 1 Query: 1 RILAVDCGIKYNMIREFLARDCVVKVVPWDHDIVAEQEWYDGLFISNGPGDPAVCAPLISNLSTVLSSPTPKPTFGICLGNQLVGIAAGCSSYKLPFGNRGQNQPVLNALTGEAFITPQNHGFAIDASKLEGTEWVELFRNANDGTNEGVMHRSKPFFTAQFHPEAHGGPVDTTFLFDMFLDTIETKSATTVVPK-PRPSAQRIRPKKVLILGSGGLSIGQAGEFDYSGAQAIKALKEE 714 +ILAVDCGIKYN+IR+ + R VK+VPW+HDIV+E WYDGLFISNGPGDPA+ + L T++++ T KP FGICLGNQL+G AAG +YKLPFGNRGQNQPV N TG+++IT QNHG+A+D KL T+W ELF N NDGTNEG++H++KPFFTAQFHPE GGP DT FLFD FLD + TK+ + RP R + KKVLILGSGGLSIGQAGEFDYSG+QAIKALKEE Sbjct: 154 KILAVDCGIKYNIIRQLVQRGAEVKLVPWNHDIVSEMHWYDGLFISNGPGDPAMLQHTVQQLETIIAADTVKPIFGICLGNQLLGRAAGADTYKLPFGNRGQNQPVNNLKTGQSYITAQNHGYALDGKKLP-TDWEELFVNGNDGTNEGIIHKTKPFFTAQFHPEHAGGPTDTEFLFDTFLDAVRTKTTGPITSLVQRPPTTRPQFKKVLILGSGGLSIGQAGEFDYSGSQAIKALKEE 391
BLAST of mRNA_M-pyrifera_M_contig71421.17028.1 vs. uniprot
Match: T0Q6Y7_SAPDV (Carbamoyl-phosphate synthase (Ammonia) n=3 Tax=Saprolegniaceae TaxID=4764 RepID=T0Q6Y7_SAPDV) HSP 1 Score: 329 bits (844), Expect = 1.100e-100 Identity = 159/239 (66.53%), Postives = 188/239 (78.66%), Query Frame = 1 Query: 1 RILAVDCGIKYNMIREFLARDCVVKVVPWDHDIVAEQEWYDGLFISNGPGDPAVCAPLISNLSTVLSSPTPKPTFGICLGNQLVGIAAGCSSYKLPFGNRGQNQPVLNALTGEAFITPQNHGFAIDASKLEGTEWVELFRNANDGTNEGVMHRSKPFFTAQFHPEAHGGPVDTTFLFDMFLDTIETKSATTVVPK-PRPSAQRIRPKKVLILGSGGLSIGQAGEFDYSGAQAIKALKEE 714 +ILAVDCGIKYN+IR+ + R VK+VPWDHDIV+E WYDGLFISNGPGDPA+ ++ L ++++S KP FGICLGNQL+G AAG +YKLPFGNRGQNQPV N TG+++IT QNHG+A+D KL TEW ELF N NDGTNEG++H++KPFFTAQFHPE GGP DT FLFD FLD + TK+ + RP R + KKVLILGSGGLSIGQAGEFDYSG+QAIKALKEE Sbjct: 207 KILAVDCGIKYNIIRQLVQRGAEVKLVPWDHDIVSEMSWYDGLFISNGPGDPAMLQHTVAQLESIIASDNVKPIFGICLGNQLLGRAAGADTYKLPFGNRGQNQPVNNLKTGQSYITAQNHGYALDGKKLP-TEWEELFVNGNDGTNEGIIHKTKPFFTAQFHPEHAGGPTDTEFLFDTFLDAVRTKTTGPITSLVQRPPTTRPQFKKVLILGSGGLSIGQAGEFDYSGSQAIKALKEE 444
BLAST of mRNA_M-pyrifera_M_contig71421.17028.1 vs. uniprot
Match: A0A485L8F9_9STRA (Aste57867_17664 protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A485L8F9_9STRA) HSP 1 Score: 326 bits (836), Expect = 1.410e-99 Identity = 157/239 (65.69%), Postives = 185/239 (77.41%), Query Frame = 1 Query: 1 RILAVDCGIKYNMIREFLARDCVVKVVPWDHDIVAEQEWYDGLFISNGPGDPAVCAPLISNLSTVLSSPTPKPTFGICLGNQLVGIAAGCSSYKLPFGNRGQNQPVLNALTGEAFITPQNHGFAIDASKLEGTEWVELFRNANDGTNEGVMHRSKPFFTAQFHPEAHGGPVDTTFLFDMFLDTIETKSATTVVPK-PRPSAQRIRPKKVLILGSGGLSIGQAGEFDYSGAQAIKALKEE 714 +ILAVDCGIK+N+IRE + R VK+VPWDHDIV+E +WYDGLFISNGPGDPA + L V+ S T KP FGICLGNQL+G AAG +YKLPFGNRGQNQPV N TG+++IT QNHG+A++ S L TEW ELF N NDGTNEG++H++KPFFTAQFHPE GGP DT FLFD FLD + K + RP+ +R+ KVL+LGSGGLSIGQAGEFDYSG+QAIKALKEE Sbjct: 210 KILAVDCGIKFNIIRELVKRGAEVKLVPWDHDIVSEMKWYDGLFISNGPGDPATLTRTVEQLQQVIQSDTVKPIFGICLGNQLLGRAAGADTYKLPFGNRGQNQPVNNLKTGQSYITSQNHGYALEGSALP-TEWEELFVNGNDGTNEGIIHKTKPFFTAQFHPEHAGGPTDTEFLFDTFLDAVRAKEKGPITSLVQRPATERLHFNKVLVLGSGGLSIGQAGEFDYSGSQAIKALKEE 447
BLAST of mRNA_M-pyrifera_M_contig71421.17028.1 vs. uniprot
Match: A0A418EN22_9STRA (ATP-grasp domain-containing protein (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418EN22_9STRA) HSP 1 Score: 320 bits (820), Expect = 1.240e-98 Identity = 158/241 (65.56%), Postives = 184/241 (76.35%), Query Frame = 1 Query: 1 RILAVDCGIKYNMIREFLARDCVVKVVPWDHDIVAEQEWYDGLFISNGPGDPAVCAPLISNLSTVLSSPTPKPTFGICLGNQLVGIAAGCSSYKLPFGNRGQNQPVLNALTGEAFITPQNHGFAIDASKLEGTEWVELFRNANDGTNEGVMHRSKPFFTAQFHPEAHGGPVDTTFLFDMFLDTI---ETKSATTVVPKPRPSAQRIRPKKVLILGSGGLSIGQAGEFDYSGAQAIKALKEE 714 +ILAVDCGIKYN+IRE + R VKVVPWDHDI +E WYDGLFISNGPGDP+ + L V+ S KP FGICLGNQL+G AAG +YKLPFGNRGQNQPV N TG+++IT QNHG+A++ L TEW ELF N NDGTNEG++H++KPFFTAQFHPE GGP DT FLFD FLD + ET T++V RP +R + KVL+LGSGGLSIGQAGEFDYSG+QAIKALKEE Sbjct: 210 KILAVDCGIKYNIIRELVKRGAEVKVVPWDHDIASEASWYDGLFISNGPGDPSTLTQTVEQLKKVIHSDVVKPIFGICLGNQLLGRAAGAGTYKLPFGNRGQNQPVNNLKTGQSYITSQNHGYALEGHDLP-TEWEELFVNGNDGTNEGIIHKTKPFFTAQFHPEHAGGPTDTAFLFDTFLDAVRAKETGPITSLVQ--RPVVERPKFNKVLVLGSGGLSIGQAGEFDYSGSQAIKALKEE 447
BLAST of mRNA_M-pyrifera_M_contig71421.17028.1 vs. uniprot
Match: W4FW10_9STRA (Carbamoyl-phosphate synthase, large subunit, variant 1 n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FW10_9STRA) HSP 1 Score: 320 bits (820), Expect = 1.310e-98 Identity = 158/241 (65.56%), Postives = 184/241 (76.35%), Query Frame = 1 Query: 1 RILAVDCGIKYNMIREFLARDCVVKVVPWDHDIVAEQEWYDGLFISNGPGDPAVCAPLISNLSTVLSSPTPKPTFGICLGNQLVGIAAGCSSYKLPFGNRGQNQPVLNALTGEAFITPQNHGFAIDASKLEGTEWVELFRNANDGTNEGVMHRSKPFFTAQFHPEAHGGPVDTTFLFDMFLDTI---ETKSATTVVPKPRPSAQRIRPKKVLILGSGGLSIGQAGEFDYSGAQAIKALKEE 714 +ILAVDCGIKYN+IRE + R VKVVPWDHDI +E WYDGLFISNGPGDP+ + L V+ S KP FGICLGNQL+G AAG +YKLPFGNRGQNQPV N TG+++IT QNHG+A++ L TEW ELF N NDGTNEG++H++KPFFTAQFHPE GGP DT FLFD FLD + ET T++V RP +R + KVL+LGSGGLSIGQAGEFDYSG+QAIKALKEE Sbjct: 210 KILAVDCGIKYNIIRELVKRGAEVKVVPWDHDIASEASWYDGLFISNGPGDPSTLTQTVEQLKKVIHSDVVKPIFGICLGNQLLGRAAGAGTYKLPFGNRGQNQPVNNLKTGQSYITSQNHGYALEGHDLP-TEWEELFVNGNDGTNEGIIHKTKPFFTAQFHPEHAGGPTDTAFLFDTFLDAVWAKETGPITSLVQ--RPVVERPKFNKVLVLGSGGLSIGQAGEFDYSGSQAIKALKEE 447
BLAST of mRNA_M-pyrifera_M_contig71421.17028.1 vs. uniprot
Match: A0A024U726_9STRA (Carbamoyl-phosphate synthase, large subunit n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024U726_9STRA) HSP 1 Score: 322 bits (826), Expect = 3.420e-98 Identity = 155/239 (64.85%), Postives = 187/239 (78.24%), Query Frame = 1 Query: 1 RILAVDCGIKYNMIREFLARDCVVKVVPWDHDIVAEQEWYDGLFISNGPGDPAVCAPLISNLSTVLSSPTPKPTFGICLGNQLVGIAAGCSSYKLPFGNRGQNQPVLNALTGEAFITPQNHGFAIDASKLEGTEWVELFRNANDGTNEGVMHRSKPFFTAQFHPEAHGGPVDTTFLFDMFLDTIETKSATTVVPK-PRPSAQRIRPKKVLILGSGGLSIGQAGEFDYSGAQAIKALKEE 714 +ILAVDCGIKYN+IRE + R VKVVPWDHDI++E W+DGLFISNGPGDP++ + L V++S KP FGICLGNQL+G AAG +YKLPFGNRGQNQPV N TG+++IT QNHG+A++ L +EW ELF N NDGTNEG++H++KPFFTAQFHPE GGP DTTFLFD FLD + K ++ RP+ +R + KKVL+LGSGGLSIGQAGEFDYSG+QAIKALKEE Sbjct: 210 KILAVDCGIKYNIIRELVKRGAEVKVVPWDHDIMSETNWFDGLFISNGPGDPSMLTQTVEQLKKVINSNQVKPIFGICLGNQLLGRAAGAGTYKLPFGNRGQNQPVNNLKTGQSYITSQNHGYALEGHDLP-SEWEELFVNGNDGTNEGIIHKTKPFFTAQFHPEHAGGPTDTTFLFDTFLDAVRAKETGSIKSLVQRPNLERPKFKKVLVLGSGGLSIGQAGEFDYSGSQAIKALKEE 447
BLAST of mRNA_M-pyrifera_M_contig71421.17028.1 vs. uniprot
Match: A0A2P4Y5R0_9STRA (Carbamoyl-phosphate synthase, large subunit (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y5R0_9STRA) HSP 1 Score: 309 bits (792), Expect = 3.940e-98 Identity = 153/241 (63.49%), Postives = 181/241 (75.10%), Query Frame = 1 Query: 1 RILAVDCGIKYNMIREFLARDCVVKVVPWDHDIVAEQEWYDGLFISNGPGDPAVCAPLISNLSTV--LSSPTPKPTFGICLGNQLVGIAAGCSSYKLPFGNRGQNQPVLNALTGEAFITPQNHGFAIDASKLEGTEWVELFRNANDGTNEGVMHRSKPFFTAQFHPEAHGGPVDTTFLFDMFLDTIETKSATTVVPK-PRPSAQRIRPKKVLILGSGGLSIGQAGEFDYSGAQAIKALKEE 714 +ILAVDCGIKYN+IRE + R VK VPW+HDI +E WYDGLFISNGPGDPA+ + L L KP FGICLGNQL+ +AAG ++YKLPFGNRGQNQPV N TG+++IT QNHG+A+D L ++W ELF N NDGTNEG++H+SKP+FTAQFHPE GGP DT FLFD FLD + TK + RP +R + KKVL+LGSGGLSIGQAGEFDYSG+QAIKALKEE Sbjct: 216 KILAVDCGIKYNIIRELVKRGAEVKRVPWNHDISSEIGWYDGLFISNGPGDPAIMKETTAQLKKAMELQGDNVKPIFGICLGNQLLSLAAGANTYKLPFGNRGQNQPVHNLKTGQSYITAQNHGYAVDGKTLP-SDWEELFVNLNDGTNEGIIHKSKPYFTAQFHPEHAGGPTDTEFLFDTFLDAVRTKEKGPIKSLVQRPHIERPKVKKVLVLGSGGLSIGQAGEFDYSGSQAIKALKEE 455
BLAST of mRNA_M-pyrifera_M_contig71421.17028.1 vs. uniprot
Match: A0A418EL71_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418EL71_9STRA) HSP 1 Score: 320 bits (820), Expect = 2.350e-97 Identity = 158/241 (65.56%), Postives = 184/241 (76.35%), Query Frame = 1 Query: 1 RILAVDCGIKYNMIREFLARDCVVKVVPWDHDIVAEQEWYDGLFISNGPGDPAVCAPLISNLSTVLSSPTPKPTFGICLGNQLVGIAAGCSSYKLPFGNRGQNQPVLNALTGEAFITPQNHGFAIDASKLEGTEWVELFRNANDGTNEGVMHRSKPFFTAQFHPEAHGGPVDTTFLFDMFLDTI---ETKSATTVVPKPRPSAQRIRPKKVLILGSGGLSIGQAGEFDYSGAQAIKALKEE 714 +ILAVDCGIKYN+IRE + R VKVVPWDHDI +E WYDGLFISNGPGDP+ + L V+ S KP FGICLGNQL+G AAG +YKLPFGNRGQNQPV N TG+++IT QNHG+A++ L TEW ELF N NDGTNEG++H++KPFFTAQFHPE GGP DT FLFD FLD + ET T++V RP +R + KVL+LGSGGLSIGQAGEFDYSG+QAIKALKEE Sbjct: 210 KILAVDCGIKYNIIRELVKRGAEVKVVPWDHDIASEASWYDGLFISNGPGDPSTLTQTVEQLKKVIHSDVVKPIFGICLGNQLLGRAAGAGTYKLPFGNRGQNQPVNNLKTGQSYITSQNHGYALEGHDLP-TEWEELFVNGNDGTNEGIIHKTKPFFTAQFHPEHAGGPTDTAFLFDTFLDAVRAKETGPITSLVQ--RPVVERPKFNKVLVLGSGGLSIGQAGEFDYSGSQAIKALKEE 447
BLAST of mRNA_M-pyrifera_M_contig71421.17028.1 vs. uniprot
Match: A0A834BY08_ORYME (Carbamoyl-phosphate synthase [ammonia], mitochondrial n=1 Tax=Oryzias melastigma TaxID=30732 RepID=A0A834BY08_ORYME) HSP 1 Score: 301 bits (770), Expect = 2.820e-97 Identity = 149/241 (61.83%), Postives = 180/241 (74.69%), Query Frame = 1 Query: 1 RILAVDCGIKYNMIREFLARDCVVKVVPWDHDIVAEQEWYDGLFISNGPGDPAVCAPLISNLSTVLSSPTPKPTFGICLGNQLVGIAAGCSSYKLPFGNRGQNQPVLNALTGEAFITPQNHGFAIDASKLEGTEWVELFRNANDGTNEGVMHRSKPFFTAQFHPEAHGGPVDTTFLFDMFLDTIET---KSATTVVPKPRPSAQRIRPKKVLILGSGGLSIGQAGEFDYSGAQAIKALKEE 714 +++AVDCGIK+N+IR + R V +VPWD D+++ Q YDGLFISNGPGDP++ LISN+ VL S P+P FGIC+GNQ+ +AAG SYKLP GNRGQNQPVLN +TG+AFIT QNHG+ ID+ L W LF NANDGTNEG+MH SKP FTAQFHPEA GGP DT FLFD F+ I+ + +V+PK R + KVL+LGSGGLSIGQAGEFDYSG+QAIKA+KEE Sbjct: 52 KVVAVDCGIKHNIIRLLVKRGAEVHLVPWDQDLLSLQ--YDGLFISNGPGDPSLAKTLISNIRKVLESERPEPVFGICMGNQITALAAGAKSYKLPMGNRGQNQPVLNVMTGQAFITAQNHGYGIDSKSLP-PGWSPLFINANDGTNEGIMHNSKPVFTAQFHPEAKGGPTDTEFLFDAFISLIKKGKDANIVSVMPKKPCLPPRAKVSKVLVLGSGGLSIGQAGEFDYSGSQAIKAMKEE 289 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig71421.17028.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig71421.17028.1 >prot_M-pyrifera_M_contig71421.17028.1 ID=prot_M-pyrifera_M_contig71421.17028.1|Name=mRNA_M-pyrifera_M_contig71421.17028.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=238bp RILAVDCGIKYNMIREFLARDCVVKVVPWDHDIVAEQEWYDGLFISNGPGback to top mRNA from alignment at M-pyrifera_M_contig71421:34..747+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig71421.17028.1 ID=mRNA_M-pyrifera_M_contig71421.17028.1|Name=mRNA_M-pyrifera_M_contig71421.17028.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=714bp|location=Sequence derived from alignment at M-pyrifera_M_contig71421:34..747+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig71421:34..747+ >mRNA_M-pyrifera_M_contig71421.17028.1 ID=mRNA_M-pyrifera_M_contig71421.17028.1|Name=mRNA_M-pyrifera_M_contig71421.17028.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1428bp|location=Sequence derived from alignment at M-pyrifera_M_contig71421:34..747+ (Macrocystis pyrifera P11B4 male)back to top |