mRNA_M-pyrifera_M_contig71379.17019.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig71379.17019.1
Unique NamemRNA_M-pyrifera_M_contig71379.17019.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig71379.17019.1 vs. uniprot
Match: A0A1V9YVN9_9STRA (Transmembrane protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YVN9_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 1.050e-18
Identity = 101/305 (33.11%), Postives = 151/305 (49.51%), Query Frame = 1
Query:   28 LVTGTS-NPRSLQVPAGSLSVGVQY--VIVAVVRQPGAAANATLRFSVTGELEPLEC-ELLGGEKRSVSVSSALTLDGSESYDPSGVVGAATTWSWSC-SAADSASGCDGVALPDQPVLQLAPGSLQANATYTFGVTMRVGATGAIAARNCTAATVVAVSSAPAPAVAVSTEHFKWASDDEVVLSANVSGSGAADATLLWALVEGDLADLDDAADGGLRRSSL--VLLPDVMTEGVSYTFQLTATAFGGGSASATVSIVINSAPSSGLCTATPSVGEQLTTVFRLVTSGWVDDAEDLPLTYAFGY 921
            LVT TS NPR L++PA  L  G     V V V  QP     AT    VT ++ P     ++ G  R+V   + L L+G+ SYDP      A  + W C +AA  A+ C G  + +  +  +    L      +  +T+   AT   ++ + T    + + + P+ ++A  T+  K+  D ++ ++  V+ S  +  T LW  ++GD +     A  G  R+SL  +LLP+ +  G SYTF LT T   G S++AT+ I IN  PSSG   + P  G  L T F L +  WVD   DLPL +AF Y
Sbjct:  707 LVTSTSRNPRQLKLPARYLDYGTYQIQVFVWVTAQPTQNNTAT----VTAQIVPNALVSIITGGFRAVGNQNDLPLNGTASYDPDSST-TALIYMWQCKNAATGAASCGGYKIANGSMSTIPQSYLPPKTNISITLTVLDTATQRTSSTSVTFT--IVLGNPPSTSIAPMTQE-KYNPDSKIAMAGIVTSSIDSAPTALWT-IQGDASQAIANATFGFSRTSLTMLLLPNTLQAGNSYTFILTGTDKFGQSSAATIYISINQPPSSGTLVSEPKSGSSLVTNFALSSLNWVD--VDLPLMFAFKY 1000          
BLAST of mRNA_M-pyrifera_M_contig71379.17019.1 vs. uniprot
Match: A0A024TEL7_9STRA (GPS domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TEL7_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 3.720e-18
Identity = 99/301 (32.89%), Postives = 150/301 (49.83%), Query Frame = 1
Query:   28 LVTGTSNPRSLQVPAGSLSVGVQYVIVAVVRQPGAAANATLRFSVTGELEPLECELLGGEKRSVSVSSALTLDGSESYDPSGVVGAATTWSWSCSAADSA-SGCDGVALPDQPVLQLAPGSLQANATYTFGVTMRVGATGAIAARNCTAATVVAVSSAPAPAVAVSTEHFKWASDDEVVLSANVSGSGAADATLLWALVEGDLADLDDAADGGLRRSSL--VLLPDVMTEGVSYTFQLTATAFGGGSASATVSIVINSAPSSGLCTATPSVGEQLTTVFRLVTSGWVDDAEDLPLTYAFGY 921
            +V+ + NPR L++    L VGV  V V V        N T   +V  +  PL   ++GG  R+V     L L+G+ S+DP      +  + W+C+  ++  + C+G A+ D  V  +A  +L         +T+    TG    R  T+ ++  V   P     VS    K+  D ++VLS +VS    A  T  WA ++GD      AA  GL  +SL  V++P+ +  G SY F LT        +SAT++I +N AP+SG    TP+ G  L+TVFR+  + WVD  EDLPL ++F Y
Sbjct: 2237 VVSESRNPRQLKL--SGLDVGVHTVTVLVFMSDRPEVNNTASVAVQIKPSPLTALIVGGN-RTVGNGDDLLLNGTRSFDPDNR-STSLEYLWACTDPNTGRTSCNGEAILDGGVTTIARDNLPPKQVIQITLTVFDPMTGR---RASTSISLTIVLGNPPVTKIVSLATTKFNPDAKIVLSGSVSSVLDAKPTATWA-IDGDQDGSIAAAAFGLSAASLRMVVVPNSLRPGRSYGFVLTGKDKFNQLSSATMTIAMNEAPTSGNVEVTPASGTTLSTVFRISCNDWVD--EDLPLKFSFKY 2527          
BLAST of mRNA_M-pyrifera_M_contig71379.17019.1 vs. uniprot
Match: F0XVM7_AURAN (REJ domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XVM7_AURAN)

HSP 1 Score: 91.7 bits (226), Expect = 1.700e-16
Identity = 103/334 (30.84%), Postives = 145/334 (43.41%), Query Frame = 1
Query:   22 PVLVTGTSNPRSLQVPAGSLSVGVQYVIVAVVRQPGAAANATLRFSVTGELEPLECELLGGEKRSVSVSSALTLDGSESYDPSGVV-GAATTWSWSCSAADSASGCDGVALPDQPVLQLAPGSLQANATYTFGVTMRVGATGAIAARNCTAATVVAV---SSAPAPAVAVSTEHFKWASDDEVVLSANVSGSGAADATLLWALVEGDLADLDDAADGGLRRSS-------------LVLLPDVMTEGVSYTFQLTA---TAFGGGSASATVSIVINSAPSSGLCTATPSVGEQLTTVFRLVTSGWVDDAEDLPLTYAFGYESPEEAGAEVVLRS 963
            P + + + +PR  ++ A +LS    Y +   V       N+       GE  P+E  +  GE  +V  +   TLD S S DP     G    ++W+          +G  +       +   +L A   +TF V   V A+G   ARN TAA VV V   +S P     +  +  K    + V L   +S   A D    W LV GDLA     AD     ++             L LLPD +T G SY F+L A   T        A V ++ N+ P+SG     P+ G  L TVF L  SGWVDDA+DLPL+Y F Y + +  G E  L++
Sbjct:  748 PGVQSTSVDPRRFRLDAYALSAATDYALDVTVADVAGRNNSASVIVRVGE-SPVEAAVDNGEF-AVGNAEVFTLDASPSRDPDQTAAGVGLDYAWTT---------NGTVVSTAASFTVDAATLAAGRKHTFAVF--VSASGN-PARNDTAAAVVQVVNVASLPTVGARLLVQTPKVNPSEAVTLVGGLSHVNALDCE--WVLVSGDLATASSLADAASTPTTGIAVAANTPSARYLKLLPDALTPGASYAFRLVAYDRTPGANLQGYARVDLLANAKPTSGALAVAPASGYTLETVFALTASGWVDDADDLPLSYEF-YYATQAGGVEFQLKT 1064          
BLAST of mRNA_M-pyrifera_M_contig71379.17019.1 vs. uniprot
Match: A0A3R6ZAS6_9STRA (REJ domain-containing protein (Fragment) n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6ZAS6_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 1.750e-16
Identity = 94/301 (31.23%), Postives = 146/301 (48.50%), Query Frame = 1
Query:   28 LVTGTSNPRSLQVPAGSLSVGVQYVIVAVVRQPGAAANATLRFSVTGELEPLECELLGGEKRSVSVSSALTLDGSESYDPSGVVGAATTWSWSCSAADSA-SGCDGVALPDQPVLQLAPGSLQANATYTFGVTMRVGATGAIAARNCTAATVVAVSSAPAPAVAVSTEHFKWASDDEVVLSANVSGSGAADATLLWALVEGDLADLDDAADGGLRRSSL--VLLPDVMTEGVSYTFQLTATAFGGGSASATVSIVINSAPSSGLCTATPSVGEQLTTVFRLVTSGWVDDAEDLPLTYAFGY 921
            +V+ + NPR L++    L VGV  V V V        N T   +V  +  PL   ++GG  R+V     L L+G+ S+DP      +  + W+C+  ++  + C+G A+ D  V  +A  +L         +T+                  + + + P   + VS    K+  D ++VLS +VS    A  T  WA ++GD      AA  GL  +SL  V++P+ +  G SY F LT        +SAT++I +N AP+SG    TP+ G  L+TVFR+  + WVD  EDLPL ++F Y
Sbjct: 2300 VVSESRNPRQLKL--SGLDVGVHTVTVLVFMSDRPEVNNTANVAVQIKPSPLTALIVGGN-RTVGNGDDLLLNGTRSFDPDNR-STSLEYLWACTDPNTGRTSCNGEAILDGGVTTIARDNLPPKQVIQITLTVLT----------------IVLGNPPVTKI-VSLATTKFNPDAKIVLSGSVSSVLDAKPTATWA-IDGDQDGSIAAAAFGLSAASLRMVVVPNSLRPGRSYGFVLTGKDKFNQLSSATMTIAMNEAPTSGNVEVTPASGTTLSTVFRISCNDWVD--EDLPLKFSFKY 2576          
BLAST of mRNA_M-pyrifera_M_contig71379.17019.1 vs. uniprot
Match: A0A662WEE3_9STRA (GPS domain-containing protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WEE3_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 2.800e-13
Identity = 94/318 (29.56%), Postives = 131/318 (41.19%), Query Frame = 1
Query:   46 NPRSLQVPAGSLSVGVQYVIVAVVRQPGAAAN------ATLRFSVTGELEPLECELLGGEKRSVSVSSALTLDGSESYDPSGVVGAATTWSWSC----------SAADSASGCDGVALP----DQPVLQLAPGSLQANATYTFGVTMRVGATGAIAARNCTAATVVAVSSAPAPAVAVSTEHFKWASDDEVVLSANVSGSGAADATLLWALVEGDLA-------DLDDAADGGLRRSSLVLLPDVMTEGVSYTFQLTATAFGGGSASATVSIVINSAPSSGLCTATPSVGEQLTTVFRLVTSGWVDDAEDLPLTYAFG 918
            +PR  ++P  SL     Y         G+ +N      A++   V       +  + GG+  ++     L LDGS + DP      A T+SW+C          +    AS    VAL        VL + P  LQ+     F +T   GA       N TA+T V +     P V  S    K      + + A VS       T  W   +GDL        D  DA    L   S  +L + +T G++Y F+L A+   G     ++S+V+NS PSSG  T TP  G  +  VF L  S W DD  D PLTY+FG
Sbjct:  828 DPRVFRLPRTSLRADRIYTFRVEAYMTGSLSNQSSSSFASVVVYVASSAP--QVSITGGDC-AIGDQDTLLLDGSGTVDPD-ASSTALTYSWTCQDITDPLVSPAICKDASISPAVALDLTASSNAVLTIPPFKLQSGRQLQFSLTASKGA------YNATASTAVWILEGHLPIVQTSASAAKINPSSRLTMEAQVSSDYPY--TARWEQTQGDLVLPDATAGDSSDAFALPLTSLSNAILKNTLTAGLTYGFRLVASDSEGNVGFGSISVVVNSPPSSGTFTVTPQSGYAMQDVFTLSCSQWSDDVNDFPLTYSFG 1133          
BLAST of mRNA_M-pyrifera_M_contig71379.17019.1 vs. uniprot
Match: A0A6G0M1T9_9STRA (GPS domain-containing protein n=7 Tax=Phytophthora TaxID=4783 RepID=A0A6G0M1T9_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 1.640e-12
Identity = 96/337 (28.49%), Postives = 148/337 (43.92%), Query Frame = 1
Query:   46 NPRSLQVPAGSLSVGVQYVIVAVVRQPGAAAN------ATLRFSVTGELEPLECELLGGEKRSVSVSSALTLDGSESYDPSGVVGAATTWSWSCSAADSAS-----------GCDGVALP----DQPVLQLAPGSLQANATYTFGVTMRVGATGAIAARNCTAATVVAVSSAPAPAVAVSTEHFKWASDDEVVLSANVSGSGAADATLLWALVEGDL----ADLDDAADG---GLRRSSLVLLPDVMTEGVSYTFQLTATAFGGGSASATVSIVINSAPSSGLCTATPSVGEQLTTVFRLVTSGWVDDAEDLPLTYAFGYESPEEAGAEVVLRSATE 972
            +PR  ++    L  G+ Y         GA+ N      A++   V+  L   +  + GG+  ++     L LDGS + DP      A T++W+C    +AS           G   V L       PVL++AP +L +N    F +T   G       R+  A++ +   +   P V V+    K    + + L+  VS       T  W    GDL    AD+ +  D     L  +S  +    +T G++Y F+L A   GG     +V++V+NS PSSG  T +PS G  +  +F L  S W DD +D PL+YAFG  S   A  E +  +AT+
Sbjct: 4059 DPRVFRLARSLLQAGLSYTFRVEAYMKGASYNQSSSSFASMVVVVSSSLP--QVTIKGGDC-ALGERDTLVLDGSTTVDPDSS-NTAFTYAWTCQDVTNASSSVVASCMNSSGTPSVPLALSSATGPVLRIAPFNLVSNRQLKFSLTAAKGP------RSAAASSTIWTVAGYLPVVQVTASATKINPSNRLSLTGAVSSDYPY--TTRWIQTLGDLVLPTADVSNTTDAFTLPLTSASNAIRSFKLTPGLTYNFRLVANDTGGNVGFGSVTVVVNSPPSSGTFTVSPSSGYAMQDLFTLTCSLWSDDKDDYPLSYAFGVLSA--ANFEALKNNATD 4381          
BLAST of mRNA_M-pyrifera_M_contig71379.17019.1 vs. uniprot
Match: G4ZXJ9_PHYSP (GPS domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZXJ9_PHYSP)

HSP 1 Score: 77.0 bits (188), Expect = 1.260e-11
Identity = 87/313 (27.80%), Postives = 142/313 (45.37%), Query Frame = 1
Query:   46 NPRSLQVPAGSLSVGVQYVIVAVVRQPGAAAN------ATLRFSVTGELEPLECELLGGEKRSVSVSSALTLDGSESYDPSGVVGAATTWSWSCSAADSASGC------DGVALPDQPV-LQLAPGSLQANATYTF--GVTMRVGATGAIAARNCTAATVVAVSSAPAPAVAVSTEHFKWASDDEVVLSANVSGSGAADATLLWALVEGDL----ADLDDAADG---GLRRSSLVLLPDVMTEGVSYTFQLTATAFGGGSASATVSIVINSAPSSGLCTATPSVGEQLTTVFRLVTSGWVDDAEDLPLTYAFG 918
            +PR  ++    L  G+ Y          A++N      A++   V+  L   +  + GG+  ++     L LDGS + DP      A T++W+C    + SG       +  A P  P+ L  A G +   A + F  G  ++   T A  +R+ TA++V+   +   P V V+    K      + L+A VS       T  W    GDL    AD+ + +D     L  ++  +    +T G++Y F+L A   GG     +V++V+NS P+SG  T +PS G  +   F L  S W DD +D PL+Y++G
Sbjct: 3857 DPRVFRLARSLLQAGLTYTFRVEAYMKSASSNQSSSSFASMVVVVSSSLP--QVTIKGGDC-ALGERDTLVLDGSTTVDPD-ASSTAFTYTWTCQDVTNTSGSTVASCMNASATPSVPLSLSSATGPVLRIAPFNFVSGRQLKFSLTAAKGSRSATASSVIWTVAGYLPVVQVTASASKINPSSRLSLTAAVSSDYPY--TTRWTQTLGDLVLPTADVSNTSDAFTLPLTSANNAIRSFKLTPGLTYNFRLVANDTGGNVGFGSVTVVVNSPPTSGTFTVSPSSGYAMQDSFTLTCSLWSDDKDDYPLSYSYG 4163          
BLAST of mRNA_M-pyrifera_M_contig71379.17019.1 vs. uniprot
Match: W4FQQ0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FQQ0_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 9.330e-11
Identity = 86/303 (28.38%), Postives = 146/303 (48.18%), Query Frame = 1
Query:   28 LVTGTSNPRSLQVPAGSLSVGVQYVIVAVVRQPGAAANATLRFSVTGELEPLECELLGGEKRSVSVSSALTLDGSESYDPSGVVGAATTWSWSCSAADSASG---CDGVALPDQPVLQLAPGSLQANATYTFGVTMRVGATGAIAARNCTAATVVAVSSAPAPAVAVSTEHFKWASDDEVVLSANVSGSGAADATLLWALVEGDLADLDDAADGGLRRSSL--VLLPDVMTEGVSYTFQLTATAFGGGSASATVSIVINSAPSSGLCTATPSVGEQLTTVFRLVTSGWVDDAEDLPLTYAFGY 921
            +V+ + NPR+L++    L  G     V V        N T    V     PL   ++GG  R++     L L+G+ S+DP        +++W+C+  D ++G   C+G+ + +  V  +    L   AT    +T+   +TG  +  N   +  V + + P   + +S    K+  D ++VL+ +V+          W+ ++GD      A+  GL  +SL  VL+P+ +  G SY+F LT        ++AT+SI +N AP+SG    +P+ G  L T F +  + WVD  EDLPL ++F Y
Sbjct: 1539 VVSESRNPRNLKL--SKLDRGSYATTVLVFMADTPEVNNTASVLVQVNPSPLVAVIVGGN-RTIGNVDDLLLNGTTSFDPDNST-TELSYTWTCT--DFSTGRTSCNGLDIDNGDVTTVPRDYLPPKATLLITLTVSDPSTGRQS--NAIVSLTVVLGNPPITKI-LSLATTKFNPDAKIVLAGSVTSVLDTQPAAQWS-IDGDSDGSLAASTFGLPVTSLRMVLVPNTLRPGRSYSFVLTGKDKFDQVSTATMSITMNEAPTSGTVEVSPAAGTTLATSFHISCTDWVD--EDLPLKFSFKY 1829          
BLAST of mRNA_M-pyrifera_M_contig71379.17019.1 vs. uniprot
Match: A0A8J6CE42_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CE42_DIALT)

HSP 1 Score: 72.8 bits (177), Expect = 3.010e-10
Identity = 110/352 (31.25%), Postives = 148/352 (42.05%), Query Frame = 1
Query:   40 TSNPRS-LQVPAGSLSVGVQY---VIVAVVRQPGAAANATLRFSVTGELEPLECELLGGEKRSVSVSSALTLDGSESYDPS----GVVGAATT----WSWS----CSAADSASGCDGVALPDQPVLQLAPGSLQANATYTFGVTM-RVGATGAIAARNCTAATVVAVSSAPAPAVAVSTEHFKWASDDEVVLSANVSGSGAADATLL--------------WA----LVEGDLAD--LDDAADG----GLRRSSLVLLPDVMTEGVSYTFQLTATAFGGGSASATVSIVINSAPSSGLCTATPSVGEQLTTVFRLVTSGWVDDAEDLPLTYAFGYESPE--EAGAEVVLRSA 966
            +S P S +++P G+L  G  Y   V   + R+P A A+A  R  V  E  PL   L+ G  R+ S   A+ +DGS S+DP+       GAA      + W+     + A              P L L P  L A   Y   +T+ + GA GA A+   T A          P V  +       + + + L A VS +    +                 WA    L  G   D  LD A+ G    G  RSSL       T G  Y FQL+  A GG  +  +V + IN  P  G    TP+ G   TT F L   GWVDD +DLPLT+AFGY   +  + GA  VL +A
Sbjct: 2554 SSVPLSAIELPGGTLLPGRVYEFAVRATMAREPSAFADAVARVRVVAE--PLRA-LIAGSDRTASAGGAVRVDGSASFDPNVPRDAAAGAAPDALLRFEWAVLRLAAGATEPLPLGAGVNASAPTLAL-PAGLLAVGEYEVRLTLSKPGAQGATASVRVTLADEAVPLIRFEPFVRRAFNAEWTVAVERIALLATVSAADGGGSXXXXXXXXXXXRTYEYAWAAFVELSSGRRVDAGLDLASPGVTTTGASRSSL-------TAGAEYIFQLSVRAVGGPVSLGSVRVPINRPPFGGTLARTPAEGVAGTTRFALRALGWVDDRDDLPLTFAFGYAPVQGGDGGAAAVLGAA 2894          
BLAST of mRNA_M-pyrifera_M_contig71379.17019.1 vs. uniprot
Match: A0A7S3LW85_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3LW85_9EUKA)

HSP 1 Score: 72.0 bits (175), Expect = 4.740e-10
Identity = 55/162 (33.95%), Postives = 85/162 (52.47%), Query Frame = 1
Query:  457 RNCTAATVVAVSSAPAPAVAVSTEH---FKWASDDEVVLSANVSGSGAADATLLWALVEGDLADLDDAAD--GGLRRSSLVLLPDVMTEGVSYTFQLTA--TAFGGGSASATVSIVINSAPSSGLCTATPSVGEQLTTVFRLVTSGWVDDAEDLPLTYAFGY 921
            R  +++ +V V++A AP  +V        K  ++ +VVL A V  +    A  +W    GD+ D+ D  +      R +L++ P+++T G +Y F   A   AF   S  A VS+V+NSAPSSG  +  P +G  + T FR++   W DD +D PL Y F Y
Sbjct:   14 RTASSSIIVRVANANAPTASVRMIEPVAAKVNANQKVVLFATVDATNPKYAEYVWTTARGDV-DISDKNNLMSQQGRQTLIIKPNILTPGTTYRFMAEAYHPAFEE-SGVAAVSVVVNSAPSSGSISVDPPIGRAMNTSFRVICEDWADDLDDTPLKYIFKY 173          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig71379.17019.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A1V9YVN9_9STRA1.050e-1833.11Transmembrane protein (Fragment) n=1 Tax=Thraustot... [more]
A0A024TEL7_9STRA3.720e-1832.89GPS domain-containing protein n=1 Tax=Aphanomyces ... [more]
F0XVM7_AURAN1.700e-1630.84REJ domain-containing protein n=1 Tax=Aureococcus ... [more]
A0A3R6ZAS6_9STRA1.750e-1631.23REJ domain-containing protein (Fragment) n=2 Tax=A... [more]
A0A662WEE3_9STRA2.800e-1329.56GPS domain-containing protein (Fragment) n=2 Tax=N... [more]
A0A6G0M1T9_9STRA1.640e-1228.49GPS domain-containing protein n=7 Tax=Phytophthora... [more]
G4ZXJ9_PHYSP1.260e-1127.80GPS domain-containing protein n=1 Tax=Phytophthora... [more]
W4FQQ0_9STRA9.330e-1128.38Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A8J6CE42_DIALT3.010e-1031.25Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A7S3LW85_9EUKA4.740e-1033.95Hypothetical protein n=1 Tax=Palpitomonas bilix Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig71379contigM-pyrifera_M_contig71379:131..1153 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score106.7
Seed ortholog evalue2.2e-20
Seed eggNOG ortholog4792.ETI39369
Hectar predicted targeting categoryother localisation
EggNOG free text desc.detection of mechanical stimulus
EggNOG OGsKOG3599@1,KOG3599@2759
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons1
Model size1023
Cds size1023
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816608.3011298-CDS-M-pyrifera_M_contig71379:130..11531622816608.3011298-CDS-M-pyrifera_M_contig71379:130..1153Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig71379 131..1153 +
1692278074.8044705-CDS-M-pyrifera_M_contig71379:130..11531692278074.8044705-CDS-M-pyrifera_M_contig71379:130..1153Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig71379 131..1153 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig71379.17019.1prot_M-pyrifera_M_contig71379.17019.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig71379 131..1153 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig71379.17019.1

>prot_M-pyrifera_M_contig71379.17019.1 ID=prot_M-pyrifera_M_contig71379.17019.1|Name=mRNA_M-pyrifera_M_contig71379.17019.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=341bp
MVGGVQLPVLVTGTSNPRSLQVPAGSLSVGVQYVIVAVVRQPGAAANATL
RFSVTGELEPLECELLGGEKRSVSVSSALTLDGSESYDPSGVVGAATTWS
WSCSAADSASGCDGVALPDQPVLQLAPGSLQANATYTFGVTMRVGATGAI
AARNCTAATVVAVSSAPAPAVAVSTEHFKWASDDEVVLSANVSGSGAADA
TLLWALVEGDLADLDDAADGGLRRSSLVLLPDVMTEGVSYTFQLTATAFG
GGSASATVSIVINSAPSSGLCTATPSVGEQLTTVFRLVTSGWVDDAEDLP
LTYAFGYESPEEAGAEVVLRSATEGGSVFDTEMAEAGAGAN
back to top

mRNA from alignment at M-pyrifera_M_contig71379:131..1153+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig71379.17019.1 ID=mRNA_M-pyrifera_M_contig71379.17019.1|Name=mRNA_M-pyrifera_M_contig71379.17019.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1023bp|location=Sequence derived from alignment at M-pyrifera_M_contig71379:131..1153+ (Macrocystis pyrifera P11B4 male)
ATGGTGGGTGGTGTGCAGCTGCCGGTGTTGGTGACTGGCACAAGCAACCC GCGCAGTCTGCAGGTGCCCGCGGGCAGCCTGTCGGTCGGCGTGCAATACG TGATTGTGGCGGTGGTGCGGCAGCCTGGAGCGGCTGCGAACGCTACCCTC CGCTTCTCCGTGACGGGCGAGCTGGAGCCGCTGGAGTGCGAGCTGCTGGG CGGCGAGAAGCGCAGCGTGAGTGTGAGCTCGGCGCTGACGCTGGACGGCA GCGAGTCGTACGATCCGTCCGGTGTCGTCGGCGCAGCCACGACCTGGTCG TGGTCTTGCTCGGCCGCCGACTCCGCTTCGGGTTGCGACGGCGTGGCGCT GCCGGACCAGCCGGTGCTGCAGCTGGCGCCCGGCTCGCTGCAGGCGAACG CAACGTACACGTTTGGGGTGACGATGCGCGTGGGCGCTACGGGCGCGATT GCGGCGCGCAACTGCACGGCGGCCACGGTGGTGGCTGTGTCTTCGGCGCC CGCTCCGGCAGTGGCTGTGTCAACGGAGCACTTCAAGTGGGCCAGCGACG ACGAGGTGGTGCTGAGTGCGAACGTGAGCGGCTCCGGCGCTGCGGATGCC ACGTTGCTGTGGGCGCTGGTGGAGGGCGACCTGGCGGATTTGGATGACGC GGCGGATGGTGGCTTGCGTCGCAGCTCGCTGGTTCTGCTTCCAGATGTGA TGACGGAGGGCGTGTCGTACACGTTCCAGCTCACCGCCACCGCGTTCGGC GGCGGCAGCGCGTCTGCTACCGTCTCCATCGTGATCAACAGCGCGCCGTC GTCGGGCCTGTGCACGGCGACGCCGAGCGTGGGCGAGCAGCTGACGACCG TGTTCCGACTGGTGACGAGCGGGTGGGTGGACGACGCGGAAGATCTGCCG CTCACGTACGCGTTCGGGTACGAGTCGCCGGAGGAGGCGGGCGCGGAGGT GGTGCTGCGCAGCGCGACGGAGGGTGGCTCCGTGTTCGACACGGAGATGG CCGAGGCGGGCGCGGGCGCCAAC
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig71379:131..1153+

>mRNA_M-pyrifera_M_contig71379.17019.1 ID=mRNA_M-pyrifera_M_contig71379.17019.1|Name=mRNA_M-pyrifera_M_contig71379.17019.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2046bp|location=Sequence derived from alignment at M-pyrifera_M_contig71379:131..1153+ (Macrocystis pyrifera P11B4 male)
ATGGTGGGTGGTGTGCAGCTGCCGGTGTTGGTGACTGGCACAAGCAACCC
GCGCAGTCTGCAGGTGCCCGCGGGCAGCCTGTCGGTCGGCGTGCAATACG
TGATTGTGGCGGTGGTGCGGCAGCCTGGAGCGGCTGCGAACGCTACCCTC
CGCTTCTCCGTGACGGGCGAGCTGGAGCCGCTGGAGTGCGAGCTGCTGGG
CGGCGAGAAGCGCAGCGTGAGTGTGAGCTCGGCGCTGACGCTGGACGGCA
GCGAGTCGTACGATCCGTCCGGTGTCGTCGGCGCAGCCACGACCTGGTCG
TGGTCTTGCTCGGCCGCCGACTCCGCTTCGGGTTGCGACGGCGTGGCGCT
GCCGGACCAGCCGGTGCTGCAGCTGGCGCCCGGCTCGCTGCAGGCGAACG
CAACGTACACGTTTGGGGTGACGATGCGCGTGGGCGCTACGGGCGCGATT
GCGGCGCGCAACTGCACGGCGGCCACGGTGGTGGCTGTGTCTTCGGCGCC
CGCTCCGGCAGTGGCTGTGTCAACGGAGCACTTCAAGTGGGCCAGCGACG
ACGAGGTGGTGCTGAGTGCGAACGTGAGCGGCTCCGGCGCTGCGGATGCC
ACGTTGCTGTGGGCGCTGGTGGAGGGCGACCTGGCGGATTTGGATGACGC
GGCGGATGGTGGCTTGCGTCGCAGCTCGCTGGTTCTGCTTCCAGATGTGA
TGACGGAGGGCGTGTCGTACACGTTCCAGCTCACCGCCACCGCGTTCGGC
GGCGGCAGCGCGTCTGCTACCGTCTCCATCGTGATCAACAGCGCGCCGTC
GTCGGGCCTGTGCACGGCGACGCCGAGCGTGGGCGAGCAGCTGACGACCG
TGTTCCGACTGGTGACGAGCGGGTGGGTGGACGACGCGGAAGATCTGCCG
CTCACGTACGCGTTCGGGTACGAGTCGCCGGAGGAGGCGGGCGCGGAGGT
GGTGCTGCGCAGCGCGACGGAGGGTGGCTCCGTGTTCGACACGGAGATGG
CCGAGGCGGGCGCGGGCGCCAACATGGTGGGTGGTGTGCAGCTGCCGGTG
TTGGTGACTGGCACAAGCAACCCGCGCAGTCTGCAGGTGCCCGCGGGCAG
CCTGTCGGTCGGCGTGCAATACGTGATTGTGGCGGTGGTGCGGCAGCCTG
GAGCGGCTGCGAACGCTACCCTCCGCTTCTCCGTGACGGGCGAGCTGGAG
CCGCTGGAGTGCGAGCTGCTGGGCGGCGAGAAGCGCAGCGTGAGTGTGAG
CTCGGCGCTGACGCTGGACGGCAGCGAGTCGTACGATCCGTCCGGTGTCG
TCGGCGCAGCCACGACCTGGTCGTGGTCTTGCTCGGCCGCCGACTCCGCT
TCGGGTTGCGACGGCGTGGCGCTGCCGGACCAGCCGGTGCTGCAGCTGGC
GCCCGGCTCGCTGCAGGCGAACGCAACGTACACGTTTGGGGTGACGATGC
GCGTGGGCGCTACGGGCGCGATTGCGGCGCGCAACTGCACGGCGGCCACG
GTGGTGGCTGTGTCTTCGGCGCCCGCTCCGGCAGTGGCTGTGTCAACGGA
GCACTTCAAGTGGGCCAGCGACGACGAGGTGGTGCTGAGTGCGAACGTGA
GCGGCTCCGGCGCTGCGGATGCCACGTTGCTGTGGGCGCTGGTGGAGGGC
GACCTGGCGGATTTGGATGACGCGGCGGATGGTGGCTTGCGTCGCAGCTC
GCTGGTTCTGCTTCCAGATGTGATGACGGAGGGCGTGTCGTACACGTTCC
AGCTCACCGCCACCGCGTTCGGCGGCGGCAGCGCGTCTGCTACCGTCTCC
ATCGTGATCAACAGCGCGCCGTCGTCGGGCCTGTGCACGGCGACGCCGAG
CGTGGGCGAGCAGCTGACGACCGTGTTCCGACTGGTGACGAGCGGGTGGG
TGGACGACGCGGAAGATCTGCCGCTCACGTACGCGTTCGGGTACGAGTCG
CCGGAGGAGGCGGGCGCGGAGGTGGTGCTGCGCAGCGCGACGGAGGGTGG
CTCCGTGTTCGACACGGAGATGGCCGAGGCGGGCGCGGGCGCCAAC
back to top