mRNA_M-pyrifera_M_contig712.16983.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig712.16983.1 vs. uniprot
Match: D7FTY6_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTY6_ECTSI) HSP 1 Score: 540 bits (1391), Expect = 4.820e-183 Identity = 330/561 (58.82%), Postives = 402/561 (71.66%), Query Frame = 1
Query: 283 MALLHDVIQTKDNGLQKLKRETDRLRRDIKRLQVEGEEHKGQENAMIVAASQNTRLLKLLEQEELKREDVLAERDTALAEVKELKHRTRTSDERHAERTAGLEVKLLKALAENTALNKKYSGTGEKILQLEKDLESIREQSTFDRETARAELRRHRQSHYGILSQLQGATDELQRTKDEVEGRAQALQVCRRQSAELEMRLGTVQSDLCTTERRSTEREVRSDGDARIAAARLSKERCLSESLENKVACMSRTVLRLVERHKELQTEVDGHRNEEKRLKAHIERLGERELRLQQQMVRLESRQSVEVTHRRLHGAIDTFNSQMMIPLTPAAC-------DESKSSGCAETLPYG-----RQQLLFKFIALFRLVSGQGAATLVKGVAEELNLSDCGLQDAEVDEVMGLVCSCPRLACLDLSMNTIGDGGAASIAQALRQPSCCLRKIDLRGNQMSMEGVRVLAKALQENVSRGVSHVYVHNEGRIDALARQRGEDIKNINTEGNNQAETEQDAAASFVSVAVVDVRNNKP-PITNTSARKTVLPVTSRGKRQGGSLGLAVG 1926
M LH VI+TKDN +QK KRE+DRLRR+IKRL VE EE +GQENAMIVAA+QN+RLLKLLEQEELKRE VL ERD ALAEV ELKHR RTSDE+HA+RT+GLEVKL+KA+ EN AL +KYS T EKI L K+LES R+Q+ FD+ETA L RQS Y ++S+LQ + DELQR KD+ E + L VCR+Q+AELEMRLGT+QSDL + ER S+ERE +D D+R+A ARL KE LSESL NKVA MSRT+LRLVERHK+L+ +V H EE RL IE +RE+R QQ++VRL+S +VE TH+RL+ A+D FNSQM P PAA DE+ + G + G R+QLL +ALF LV+G+ T + EL+LSDCGL D +V VM L CSCPRL L+LSMN IGD GAAS+A LR SC LR++DL NQMSMEGVRVLAKAL+EN SRGVSHVYVH+EGRIDAL R++ + +++ E N+ + EQDA F SV +VD R+N P P N T LP+ RGKRQ G + A G
Sbjct: 1 MGSLHGVIETKDNAVQKHKRESDRLRREIKRLHVEREERQGQENAMIVAATQNSRLLKLLEQEELKRESVLTERDEALAEVSELKHRVRTSDEQHAKRTSGLEVKLIKAIGENLALKEKYSSTDEKIETLTKELESARKQAKFDKETAETALSTLRQSQYRVISELQESRDELQRYKDQAETKGDELAVCRQQNAELEMRLGTLQSDLNSMERTSSEREAAADEDSRLAQARLEKEISLSESLHNKVASMSRTILRLVERHKDLKAQVVKHEAEEARLGDQIEEARKREVRFQQKVVRLKSSLTVETTHKRLYAALDKFNSQMTKPPLPAANGGGNLPHDEALAIGPSTQRIKGDALRCRRQLLSNHMALFGLVAGRDDGTSARHALNELDLSDCGLDDFDVHGVMELACSCPRLEVLNLSMNYIGDAGAASLATVLRLASCGLRRLDLTCNQMSMEGVRVLAKALEENCSRGVSHVYVHSEGRIDALGREKEDKCQSVK-ERNSVPDEEQDALGMFFSVVIVDARDNHPQPAGNPD---TALPLARRGKRQIGHIAAARG 557
BLAST of mRNA_M-pyrifera_M_contig712.16983.1 vs. uniprot
Match: A0A835Z915_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z915_9STRA) HSP 1 Score: 169 bits (428), Expect = 7.060e-41 Identity = 179/615 (29.11%), Postives = 274/615 (44.55%), Query Frame = 1
Query: 148 TKEETTHLIKLRDDMISAKHEEASVLILSQQNEDLREGIDAVESEMALLHDVIQTKDNGLQKLKRETDRLRRDIKRLQVEGEEHKGQENAMIVAASQNTRLLKLLEQEELKREDVLAERDTALAEVKELKHRTRTSDERHAERTAGLEVKLLKALAENTALNKKYSGTGEKILQLEKDLESIREQSTFDRETARAELRRHRQSHYGILSQLQGATDELQRTKDEVEGRAQALQVCRRQSAELEMRLGTVQSDLCTTERRSTEREVRSDGDARIAAARLSKERCLSESLENKVACMSRTVLRLVERHKELQTEVDGHRNEEKRLKAHIERLGERELRLQQQMVRLESRQSVEVTHRRLHGAIDTFNSQMMIPL--------------------TPAACDESKSSGCA-ETLPYGRQQLLFKFIALFRLVSGQGAATLVK----------------------GVAEEL--NLSDCGLQDAEVDEVMGLVCSCPRLACL-----DLSMNTIGDGGAASIAQALRQPSCCLRKIDLRGNQMSMEGVRVLAKALQENVSRGVSHVYVHNEGRIDALARQRGEDIKNINTEGNNQ--AETEQDAAA--SFVSVAVVDVRNN 1830
+K + L+++RD M+ AK +E S +++ QN LR+ +A E+EMA L ++ K+ L ++ ++R R +KRLQ E E + G+E A+ ++A+Q+TRLLKLLEQEE+KRE +L E+D A++EV ELK R + HAE+ L+++L KAL + A N+ ++G +D E A L + A E +L + L + + + R+ DA +A AR +R E L+ +V + +L+ + +L S S+E T RRLH A+D FN+QM + A + S+ A + + ++Q+L F+ + AA V G EL L +CG+ D+++D V + L DLS N I D GA+ +A LR C ++++DLR NQ++MEGVR LA+AL+ G+SHVYVH EGRIDAL Q+ + T G++ A TEQ S VS+AVVDVR+N
Sbjct: 35 SKVQLLRLLRVRDGMLEAKQKEVS--LVAHQNGLLRDQTNAAEAEMAALQLTLKEKEQALSAERKVSERAGRAVKRLQNEMEHYLGREQAIHMSAAQSTRLLKLLEQEEIKREHLLREKDAAVSEVGELKARVAALTKTHAEQEVDLQLRLAKALRDLAATNEHHAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRDGGEDAAALLSALSHKGAAQEAQLAAALAALADVRAAARDAQARAAEDAALADARAESDRAAKEKLQERVRDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTALTQQLRGVVDQLRSAASMEATQRRLHRALDKFNTQMAPGVGGXXXXXXXXXXXXXXXXFVADMAGGVTASAWTALQQQTWSKRQMLSLFVQHAAATAAASAANAVVPDSGACDADSPASFKMERSGAGGTPSELLIPLGNCGIVDSDIDCVADTLARVAEYTALPPLMVDLSANFITDTGASQLAAVLRLDGCKVKRLDLRYNQVTMEGVRALARALESCTHHGISHVYVHAEGRIDALGVQQPQ----CTTGGSSTDAAATEQQPLGPDSLVSIAVVDVRDN 643 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig712.16983.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig712.16983.1 >prot_M-pyrifera_M_contig712.16983.1 ID=prot_M-pyrifera_M_contig712.16983.1|Name=mRNA_M-pyrifera_M_contig712.16983.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=642bp MESTCASTTPSRGGCSSTSVGKLGMSKGSRKAKTKAVNRNEVSVDPSSRTback to top mRNA from alignment at M-pyrifera_M_contig712:1743..17857+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig712.16983.1 ID=mRNA_M-pyrifera_M_contig712.16983.1|Name=mRNA_M-pyrifera_M_contig712.16983.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=16115bp|location=Sequence derived from alignment at M-pyrifera_M_contig712:1743..17857+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig712:1743..17857+ >mRNA_M-pyrifera_M_contig712.16983.1 ID=mRNA_M-pyrifera_M_contig712.16983.1|Name=mRNA_M-pyrifera_M_contig712.16983.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=3852bp|location=Sequence derived from alignment at M-pyrifera_M_contig712:1743..17857+ (Macrocystis pyrifera P11B4 male)back to top |