mRNA_M-pyrifera_M_contig71187.16978.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig71187.16978.1
Unique NamemRNA_M-pyrifera_M_contig71187.16978.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig71187.16978.1 vs. uniprot
Match: UPI00051089EB (importin-5-like n=1 Tax=Pyrus x bretschneideri TaxID=225117 RepID=UPI00051089EB)

HSP 1 Score: 87.8 bits (216), Expect = 1.880e-15
Identity = 81/328 (24.70%), Postives = 146/328 (44.51%), Query Frame = 1
Query:    1 DTCRPVFVQAVAEPAAIALMELAAHGHIQAQQQAITAVSALTLTMGERAPASVYDNVMPIAKELIDEATPVADQRDGDVEEIEMARSVRNRAFEAIGALFSTVSKEKCREDAGQVVDMLLKYSDTSRFAPSDIESYRYMQRCMVRIAEVMGEDFTPYYEDVLPPLFRVARSKIDGMGGMGVEARGNTDDLDDMIETLKASGSASRMLTVDAHAAAHRAAAVMMLFVYSQQCADHLGKWIGEVVDVMIEASSDRINTSVRSAAICSFAKLL---KASIANRHEAGAVDP--QELLDAILELLLSMLRTETVASMRTNLAEVTSNVLQVC 969
            + C P  +    +     L+ L  +G    Q+ A+TA++++  +  E      YD VMP  K ++  AT  ++            R +R ++ E I  +   V K+K R+DA QV+++L+    +   A     SY  M +   R+ + +G+DF PY   V+PPL + A+ K D +     +   + DD DD  E+++      + + +       +A A  ML  Y+ +  +    WI +V   ++       +  VR AA+ +  +LL   K +I      G  +   ++L D I+  L+  L  E    +  N+ +  +  LQVC
Sbjct:  489 ENCTPDILTPYLDGVVSKLLVLLQNGKQMVQEGALTALASVADSSQEHFQ-KYYDAVMPYLKAILVNATDKSN------------RMLRAKSMECISLVGMAVGKDKFRDDAKQVMEVLMALQGSGMEADDPTTSY--MLQAWARLCKCLGQDFLPYMSVVMPPLLQSAQLKPD-VTITSADDNSDIDDSDD--ESIETITLGDKRIGIKTSVLEEKATACNMLCCYADELKEGFFPWIDQVAPTLVPLLKFYFHDEVRKAAVSAMPELLLSAKLAIEKGQAQGRNETYIKQLSDYIVPALVEALHKEPDTEICANILDALNECLQVC 798          
BLAST of mRNA_M-pyrifera_M_contig71187.16978.1 vs. uniprot
Match: A0A7N2M3E8_QUELO (Importin N-terminal domain-containing protein n=5 Tax=Fagales TaxID=3502 RepID=A0A7N2M3E8_QUELO)

HSP 1 Score: 87.4 bits (215), Expect = 2.780e-15
Identity = 66/273 (24.18%), Postives = 128/273 (46.89%), Query Frame = 1
Query:    1 DTCRPVFVQAVAEPAAIALMELAAHGHIQAQQQAITAVSALTLTMGERAPASVYDNVMPIAKELIDEATPVADQRDGDVEEIEMARSVRNRAFEAIGALFSTVSKEKCREDAGQVVDMLLKYSDTSRFAPSDIESYRYMQRCMVRIAEVMGEDFTPYYEDVLPPLFRVARSKIDGMGGMGVEARGNTDDLDDMIETLKASGSASRMLTVDAHAAAHRAAAVMMLFVYSQQCADHLGKWIGEVVDVMIEASSDRINTSVRSAAICSFAKLLKAS 819
            + C P  +    +     L+ L  +G    Q+ A+TA++++  +  E+     YD VMP  K ++  A   ++            R +R ++ E I  +   V K+K R+DA QV+D+L+    +     SD  +  YM +   R+ + +G+DF PY   V+PPL + A+ K D    + + +  + DD+D+  E+++      + + +       +A A  ML  Y+ +  +    WI +V   ++       +  VR AA+ +  +LL+++
Sbjct:  487 ENCTPDILTPYLDVIVTKLLVLLQNGKQMVQEGALTALASVADSSQEQFQ-KYYDAVMPYLKTILVNANDKSN------------RMLRAKSMECISLVGMAVGKDKFRDDAKQVMDVLMSLQGSQM--ESDDPTTSYMLQAWARLCKCLGQDFLPYMNVVMPPLLQSAQLKPD----VTITSADSDDDIDEDDESIETITLGDKRIGIKTSVLEEKATACNMLCCYADELKEGFFPWIEQVAPTLVPLLKFYFHEEVRKAAVSAMPELLRSA 740          
BLAST of mRNA_M-pyrifera_M_contig71187.16978.1 vs. uniprot
Match: A0A443N5C6_9MAGN (Importin-5-like protein n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A443N5C6_9MAGN)

HSP 1 Score: 87.4 bits (215), Expect = 2.790e-15
Identity = 81/306 (26.47%), Postives = 144/306 (47.06%), Query Frame = 1
Query:   55 LMELAAHGHIQAQQQAITAVSALTLTMGERAPASVYDNVMPIAKELIDEATPVADQRDGDVEEIEMARSVRNRAFEAIGALFSTVSKEKCREDAGQVVDMLLKYSDTSRFAPSDIESYRYMQRCMVRIAEVMGEDFTPYYEDVLPPLFRVARSKIDGMGGMGVEARGNTDDLDDMI-ETLKASGSASRMLTVDAHAAAHRAAAVMMLFVYSQQCADHLGKWIGEVVDVMIEASSDRINTSVRSAAICSFAKLLKA-------SIANRHEAGAVD--PQELLDAILELLLSMLRTETVASMRTNLAE 942
            L+ L  +G    Q+ A+TA++++  +  E    + YD VMP  K ++ +AT  ++            R +R ++ E I  +   V KEK R+DA QV+++L+    T   A     SY  M +   R+ + +G+DF PY   V+PPL R A+ K D +    + +  + DD+D+   E+++      + + +       +A A  ML  Y+++  +    WI EV   ++       +  VR AAI +  +LL++       S+A   +   V      ++ A++E L     TE  A+M  +L E
Sbjct:  514 LLILLQNGKQMVQEGALTALASVADSSQEHFK-TYYDVVMPYLKAILMKATDKSN------------RMLRAKSMECISLVGMAVGKEKFRDDAKQVMEVLMTLQGTPTEADDPTASY--MLQAWTRLCKCLGQDFLPYMSVVMPPLLRSAQLKPDVI----ITSVDSDDDMDESDNESIETITLGDKRIGIKTSVLEEKATACNMLCCYAEELKEGFYPWIDEVAPTLVPLLKFYFHEEVRKAAISAMPELLRSAKLAVEKSVAQGQDESYVKWLSDYIIPALVEALHKEPETEICANMLDSLNE 800          
BLAST of mRNA_M-pyrifera_M_contig71187.16978.1 vs. uniprot
Match: UPI001FB09F89 (importin-5-like n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB09F89)

HSP 1 Score: 87.0 bits (214), Expect = 3.740e-15
Identity = 81/329 (24.62%), Postives = 146/329 (44.38%), Query Frame = 1
Query:    1 DTCRPVFVQAVAEPAAIALMELAAHGHIQAQQQAITAVSALTLTMGERAPASVYDNVMPIAKELIDEATPVADQRDGDVEEIEMARSVRNRAFEAIGALFSTVSKEKCREDAGQVVDMLLKYSDTSRFAPSDIESYRYMQRCMVRIAEVMGEDFTPYYEDVLPPLFRVARSKIDGMGGMGVEARGNTDDLDDMIETLKASGSASRMLTVDAHAAAHRAAAVMMLFVYSQQCADHLGKWIGEVVDVMIEASSDRINTSVRSAAICSFAKLLKAS-------IANRHEAGAVDPQELLDAILELLLSMLRTETVASMRTNLAEVTSNVLQV 966
            + C P  +    +     L+ L  +G    Q+ A+TA++++  +  E      YD VMP  K ++  AT  ++            R +R +A E I  +   V K+K REDA  V+D+L+    T   +   I SY  M +   R+ + +G+DF PY   V+PPL + A+ K D +     E+    D  DD  E+++      + +++       +A A  ML  Y+ +  +    WI +V   M+       +  VR AA+ +  +LL+++       IA       +  ++L D I+  L+  L  E    +  N+ +  +  +Q+
Sbjct:  490 ENCTPDLLTPYLDGLINKLLILLQNGKQMVQEGALTALASVADSSQEHFQ-KYYDAVMPYLKAILVNATDKSN------------RMLRAKAMECISLVGMAVGKDKFREDAKHVMDVLMSLQGTQMESDDPIASY--MLQAWARLCKCLGQDFLPYMSVVMPPLLQSAQLKPD-VTITSTESDDEIDQSDD--ESIETITLGDKRISIKTSVLEEKATACNMLCCYADELKEGFYPWIDQVAPTMVPLLKFYFHEEVRKAAVSAMPELLRSAKLAVEKGIAQGRNESYI--KQLTDYIVPALVEALHKEPDTEICANMLDALNECIQI 798          
BLAST of mRNA_M-pyrifera_M_contig71187.16978.1 vs. uniprot
Match: A0A1U8M957_GOSHI (importin-5-like n=20 Tax=Malvaceae TaxID=3629 RepID=A0A1U8M957_GOSHI)

HSP 1 Score: 87.0 bits (214), Expect = 3.750e-15
Identity = 72/274 (26.28%), Postives = 127/274 (46.35%), Query Frame = 1
Query:    1 DTCRPVFVQAVAEPAAIALMELAAHGHIQAQQQAITAVSALTLTMGERAPASVYDNVMPIAKELIDEATPVADQRDGDVEEIEMARSVRNRAFEAIGALFSTVSKEKCREDAGQVVDMLLKYSDTSRFAPSDIESYRYMQRCMVRIAEVMGEDFTPYYEDVLPPLFRVARSKIDGMGGMGVEARGNTDDL-DDMIETLKASGSASRMLTVDAHAAAHRAAAVMMLFVYSQQCADHLGKWIGEVVDVMIEASSDRINTSVRSAAICSFAKLLKAS 819
            + C P  +    +     L+ L  +G    Q+ A+TA++++  +  E+     YD VMP  K ++  A   ++            R +R +A E I  +   V KEK R+DA QV+D+L+    +     SD  +  YM +   R+ + +G+DF PY   V+PPL + A+ K D +     ++  N DD  D+ IET+       R + +       +A A  ML  Y+ +  +    WI +V   ++       +  VR AA+ +  +LL+++
Sbjct:  495 ENCTPDILTPYLDGIVSKLLVLLQNGKQMVQEGALTALASVADSSQEQFQ-KYYDAVMPYLKAILVNANDKSN------------RMLRAKAMECISLVGMAVGKEKFRDDAKQVMDVLMSLQVSQM--ESDDPTTSYMLQAWARLCKCLGQDFLPYMSVVMPPLLQSAQLKPD-VTITSADSDANVDDXXDESIETITLG---DRRIGIKTSVLEEKATACNMLCCYADELKEGFFPWIDQVATTLVPLLKFYFHEEVRKAAVSAMPELLRSA 749          
BLAST of mRNA_M-pyrifera_M_contig71187.16978.1 vs. uniprot
Match: A0A8J5HN78_ZINOF (Uncharacterized protein n=8 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5HN78_ZINOF)

HSP 1 Score: 87.0 bits (214), Expect = 3.770e-15
Identity = 81/324 (25.00%), Postives = 153/324 (47.22%), Query Frame = 1
Query:    1 DTCRPVFVQAVAEPAAIALMELAAHGHIQAQQQAITAVSALTLTMGERAPASVYDNVMPIAKELIDEATPVADQRDGDVEEIEMARSVRNRAFEAIGALFSTVSKEKCREDAGQVVDMLLKYSDTSRFAPSDIESYRYMQRCMVRIAEVMGEDFTPYYEDVLPPLFRVARSKIDGMGGMGVEARGNTDDLDDMI-ETLKASGSASRMLTVDAHAAAHRAAAVMMLFVYSQQCADHLGKWIGEVVDVMIEASSDRINTSVRSAAICSFAKLLKAS--IANRHEAGAVDP---QELLDAILELLLSMLR----TETVASMRTNLAE 942
            + C P  +    +     L+ L  +G+   Q+ A+TA++++  +  E+     YD VMP  K ++  AT  ++            R +R ++ E I  +   V KEK R+DA QV+++L+    +     +D  +  YM +   R+ + +G+DF PY   V+PPL + A+ K D    + + + G+ DD++D   E+++      + + +       +A A  ML  Y+ +  +    WI +V   ++       +  VR AA+ +  +LL+++     + +A   D    ++L D I+  L+  L+    TE  ASM  +L E
Sbjct:  532 ENCTPDILTPYLDGIVGKLLVLLQNGNQMVQEGALTALASVADSSQEQFQ-KYYDAVMPYLKVILMNATNKSN------------RMLRAKSMECISLVGMAVGKEKFRDDAKQVMEVLMALQGSQM--ETDDPTTSYMLQAWARLCKCLGQDFLPYMNVVMPPLLQSAQLKPD----VTITSAGSDDDIEDSDDESVETITLGDKRIGIRTSVLEEKATACNMLCCYADELKEGFYPWIDQVAPTLVPLLKFYFHEEVRKAAVAAMPELLRSAKLAVEKGQAQGRDESYVKQLSDYIIPALVEALQKEPETEICASMLDSLNE 836          
BLAST of mRNA_M-pyrifera_M_contig71187.16978.1 vs. uniprot
Match: A0A7J9EC49_9ROSI (TOG domain-containing protein n=2 Tax=Malvoideae TaxID=214907 RepID=A0A7J9EC49_9ROSI)

HSP 1 Score: 85.9 bits (211), Expect = 8.580e-15
Identity = 71/274 (25.91%), Postives = 127/274 (46.35%), Query Frame = 1
Query:    1 DTCRPVFVQAVAEPAAIALMELAAHGHIQAQQQAITAVSALTLTMGERAPASVYDNVMPIAKELIDEATPVADQRDGDVEEIEMARSVRNRAFEAIGALFSTVSKEKCREDAGQVVDMLLKYSDTSRFAPSDIESYRYMQRCMVRIAEVMGEDFTPYYEDVLPPLFRVARSKIDGMGGMGVEARGNTDDL-DDMIETLKASGSASRMLTVDAHAAAHRAAAVMMLFVYSQQCADHLGKWIGEVVDVMIEASSDRINTSVRSAAICSFAKLLKAS 819
            + C P  +    +     L+ L  +G    Q+ A+TA++++  +  E+     YD VMP  K ++  A   ++            R +R +A E I  +   V KEK R+DA QV+D+L+    +     SD  +  YM +   R+ + +G+DF PY   V+PPL + A+ K D +     ++  N DD  D+ IET+       + + +       +A A  ML  Y+ +  +    WI +V   ++       +  VR AA+ +  +LL+++
Sbjct:  258 ENCTPDILTPYLDGIVSKLLVLLQNGKQMVQEGALTALASVADSSQEQFQ-KYYDAVMPYLKAILVNANDKSN------------RMLRAKAMECISLVGMAVGKEKFRDDAKQVMDVLMSLQVSQM--ESDDPTTSYMLQAWARLCKCLGQDFLPYMSVVMPPLLQSAQLKPD-VTITSADSDANVDDXXDESIETITLG---DKRIGIKTSVLEEKATACNMLCCYADELKEGFFPWIDQVATTLVPLLKFYFHEEVRKAAVSAMPELLRSA 512          
BLAST of mRNA_M-pyrifera_M_contig71187.16978.1 vs. uniprot
Match: UPI000C873465 (importin-5 n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI000C873465)

HSP 1 Score: 85.9 bits (211), Expect = 9.100e-15
Identity = 84/327 (25.69%), Postives = 148/327 (45.26%), Query Frame = 1
Query:    1 DTCRPVFVQAVAEPAAIALMELAAHGHIQAQQQAITAVSALTLTMGERAPASVYDNVMPIAKELIDEATPVADQRDGDVEEIEMARSVRNRAFEAIGALFSTVSKEKCREDAGQVVDMLLKYSDTSRFAPSDIESYRYMQRCMVRIAEVMGEDFTPYYEDVLPPLFRVARSKIDGMGGMGVEARGNTDDLDDM----IETLKASGSASRMLTVDAHAAAHRAAAVMMLFVYSQQCADHLGKWIGEVVDVMIEASSDRINTSVRSAAICSFAKLL---KASIANRHEAGAVDP--QELLDAILELLLSMLR----TETVASMRTNLAE 942
            + C P  +    +     L+ L  +G    Q+ A+TA++++  +  E      YD VMP  K ++  AT  ++            R +R ++ E I  +   V K+K R+DA QV+++L+    +   A   I SY  M +   R+ + +G+DF PY   V+PPL + A+ K D    + + +  + D++DD     IET+       + + +       +A A  ML  Y+ +  +    WI +V   ++       +  VR AA+ +  +LL   K ++  R   G  +   ++L D I+  L+  L     TE  ASM  +L E
Sbjct:  488 ENCTPEILTPYLDGIVGKLLVLLQNGKQMVQEGALTALASVADSSQEHFQ-KYYDAVMPYLKAILMNATDKSN------------RMLRAKSMECISLVGMAVGKDKFRDDAKQVMEVLMTLQGSQMEADDPITSY--MLQAWARLCKCLGQDFLPYMSVVMPPLLQSAQLKPD----VTITSADSDDEIDDSDDDSIETITLG---DKRIGIRTSVLEEKATACNMLCCYADELKEGFYPWIDQVAPTLVPLLKFYFHEEVRKAAVSAMPELLRSAKLAVEKRQALGRDESYVKQLSDYIIPALVEALHKEPETEICASMLDSLNE 792          
BLAST of mRNA_M-pyrifera_M_contig71187.16978.1 vs. uniprot
Match: A0A6I9S7C9_ELAGV (importin-5 isoform X3 n=3 Tax=Arecaceae TaxID=4710 RepID=A0A6I9S7C9_ELAGV)

HSP 1 Score: 85.9 bits (211), Expect = 9.110e-15
Identity = 85/325 (26.15%), Postives = 142/325 (43.69%), Query Frame = 1
Query:    1 DTCRPVFVQAVAEPAAIALMELAAHGHIQAQQQAITAVSALTLTMGERAPASVYDNVMPIAKELIDEATPVADQRDGDVEEIEMARSVRNRAFEAIGALFSTVSKEKCREDAGQVVDMLLKYSDTSRFAPSDIESYRYMQRCMVRIAEVMGEDFTPYYEDVLPPLFRVARSKIDGMGGMGVEARGNTDDLDDMIETLKASGSASRMLTVDAHAAAHRAAAVMMLFVYSQQCADHLGKWIGEVVDVMIEASSDRINTSVRSAAICSFAKLLKAS-------IANRHEAGAVDPQELLDAILELLLSMLR----TETVASMRTNLAE 942
            + C P  +    +     L+ L  +G    Q+ A+TA++++  +  E+     YD VMP  K +   AT  +             R +R ++ E I  +   V KEK REDA QV+++L+    +   A   I SY  M +   R+ + +G+DF PY   V+PPL + A+ K D             D  DD IET+       + + +       +A A  ML  Y+ +  +    WI +V   ++       +  VR AA+ +  +LL+++       +A   +   V  ++L D I+  L+  L     TE  ASM  +L E
Sbjct:  494 ENCTPDILTPYLDGIVSKLLVLLQNGKQMVQEGALTALASVADSSQEQFQ-KYYDAVMPYLKAIFMNATDKS------------KRMLRAKSMECISLVGMAVGKEKFREDAKQVMEVLMTLQGSQMEADDPITSY--MLQAWARLCKCLGQDFLPYMNIVMPPLLQSAQLKPDVTITSADSDEEIDDSDDDSIETITLG---DKRIGIRTSVLEEKATACNMLCCYADELKEGFYPWIDQVAPTLVPLLKFYFHEEVRKAAVAAMPELLRSAKLAVEKGLAQGRDESYV--KQLSDYIIPSLIEALHKEPETEICASMLDSLNE 798          
BLAST of mRNA_M-pyrifera_M_contig71187.16978.1 vs. uniprot
Match: A0A843XH73_COLES (TOG domain-containing protein n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843XH73_COLES)

HSP 1 Score: 85.9 bits (211), Expect = 9.280e-15
Identity = 81/326 (24.85%), Postives = 148/326 (45.40%), Query Frame = 1
Query:    1 DTCRPVFVQAVAEPAAIALMELAAHGHIQAQQQAITAVSALTLTMGERAPASVYDNVMPIAKELIDEATPVADQRDGDVEEIEMARSVRNRAFEAIGALFSTVSKEKCREDAGQVVDMLLKYSDTSRFAPSDIESYRYMQRCMVRIAEVMGEDFTPYYEDVLPPLFRVARSKIDGMGGMGVEARGNTDDLDDMI-ETLKASGSASRMLTVDAHAAAHRAAAVMMLFVYSQQCADHLGKWIGEVVDVMIEASSDRINTSVRSAAICSFAKLLKAS-------IANRHEAGAVDPQELLDAILELLLSMLR----TETVASMRTNLAE 942
            + C P  +    +     L+ L  +G    Q+ A+TA++++  +  E      YD VMP  K ++  AT  +             R +R +A E I  +   V K+K R+DA QV+++L+    +     SD  +  YM +   R+ + +G+DF PY   V+PPL + A+ K D    + + +  + DD+D+   E+++      + + +       +A A  ML  Y+ +  +    WI +V   ++       +  VR AA+ +  +LL+++       +A   +   V  ++L D I+  L+  L     TE  ASM  +L E
Sbjct:  497 ENCTPEILTPYLDGIVSKLLVLLQNGKQMVQEGALTALASVADSSQEHFQ-KYYDAVMPYLKSILMTATDKS------------KRMLRAKAMECISLVGMAVGKDKFRDDAKQVMEVLMTLQGSQM--ESDDPTISYMLQAWARLCKCLGQDFLPYMSVVMPPLLQSAQLKPD----VTITSADSDDDIDESDDESIETITLGDKRIGIKTSVLEEKATACNMLCCYADELKEGFYPWIDQVAPTLVPLLKFYFHEEVRKAAVSAMPELLRSAKLAVEKGLAQGRDESYV--KQLSDYIIPALIEALHKEPETEICASMLDSLNE 801          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig71187.16978.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00051089EB1.880e-1524.70importin-5-like n=1 Tax=Pyrus x bretschneideri Tax... [more]
A0A7N2M3E8_QUELO2.780e-1524.18Importin N-terminal domain-containing protein n=5 ... [more]
A0A443N5C6_9MAGN2.790e-1526.47Importin-5-like protein n=1 Tax=Cinnamomum micrant... [more]
UPI001FB09F893.740e-1524.62importin-5-like n=1 Tax=Impatiens glandulifera Tax... [more]
A0A1U8M957_GOSHI3.750e-1526.28importin-5-like n=20 Tax=Malvaceae TaxID=3629 RepI... [more]
A0A8J5HN78_ZINOF3.770e-1525.00Uncharacterized protein n=8 Tax=Zingiber officinal... [more]
A0A7J9EC49_9ROSI8.580e-1525.91TOG domain-containing protein n=2 Tax=Malvoideae T... [more]
UPI000C8734659.100e-1525.69importin-5 n=1 Tax=Dioscorea cayennensis subsp. ro... [more]
A0A6I9S7C9_ELAGV9.110e-1526.15importin-5 isoform X3 n=3 Tax=Arecaceae TaxID=4710... [more]
A0A843XH73_COLES9.280e-1524.85TOG domain-containing protein n=1 Tax=Colocasia es... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig71187contigM-pyrifera_M_contig71187:31..1098 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score94.0
Seed ortholog evalue1.4e-16
Seed eggNOG ortholog272952.HpaP800094
KEGG koko:K20222
KEGG TC1.I.1
Hectar predicted targeting categoryother localisation
GOsGO:0000060,GO:0003674,GO:0005048,GO:0005215,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005737,GO:0006606,GO:0006607,GO:0006610,GO:0006810,GO:0006886,GO:0006913,GO:0008104,GO:0008139,GO:0008150,GO:0008565,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0017038,GO:0031090,GO:0031965,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0033036,GO:0033218,GO:0033365,GO:0034399,GO:0034504,GO:0034613,GO:0042277,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045184,GO:0046907,GO:0051169,GO:0051170,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0070013,GO:0070727,GO:0071702,GO:0071705,GO:0072594
EggNOG free text desc.ribosomal protein import into nucleus
EggNOG OGs3Q7JP@4776,KOG2171@1,KOG2171@2759
COG Functional cat.UY
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03009
Exons2
Model size969
Cds size969
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816606.1713958-CDS-M-pyrifera_M_contig71187:30..5521622816606.1713958-CDS-M-pyrifera_M_contig71187:30..552Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig71187 31..552 +
1692278073.538473-CDS-M-pyrifera_M_contig71187:30..5521692278073.538473-CDS-M-pyrifera_M_contig71187:30..552Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig71187 31..552 +
1622816606.1858356-CDS-M-pyrifera_M_contig71187:651..10981622816606.1858356-CDS-M-pyrifera_M_contig71187:651..1098Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig71187 652..1098 +
1692278073.5522413-CDS-M-pyrifera_M_contig71187:651..10981692278073.5522413-CDS-M-pyrifera_M_contig71187:651..1098Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig71187 652..1098 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig71187.16978.1prot_M-pyrifera_M_contig71187.16978.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig71187 31..1098 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig71187.16978.1

>prot_M-pyrifera_M_contig71187.16978.1 ID=prot_M-pyrifera_M_contig71187.16978.1|Name=mRNA_M-pyrifera_M_contig71187.16978.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=323bp
DTCRPVFVQAVAEPAAIALMELAAHGHIQAQQQAITAVSALTLTMGERAP
ASVYDNVMPIAKELIDEATPVADQRDGDVEEIEMARSVRNRAFEAIGALF
STVSKEKCREDAGQVVDMLLKYSDTSRFAPSDIESYRYMQRCMVRIAEVM
GEDFTPYYEDVLPPLFRVARSKIDGMGGMGVEARGNTDDLDDMIETLKAS
GSASRMLTVDAHAAAHRAAAVMMLFVYSQQCADHLGKWIGEVVDVMIEAS
SDRINTSVRSAAICSFAKLLKASIANRHEAGAVDPQELLDAILELLLSML
RTETVASMRTNLAEVTSNVLQVC
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mRNA from alignment at M-pyrifera_M_contig71187:31..1098+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig71187.16978.1 ID=mRNA_M-pyrifera_M_contig71187.16978.1|Name=mRNA_M-pyrifera_M_contig71187.16978.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1068bp|location=Sequence derived from alignment at M-pyrifera_M_contig71187:31..1098+ (Macrocystis pyrifera P11B4 male)
GACACATGCAGGCCAGTATTTGTTCAAGCTGTTGCCGAACCAGCCGCCAT CGCTTTGATGGAACTTGCTGCACATGGACACATTCAAGCTCAACAACAAG CCATCACTGCAGTTTCTGCATTGACCCTCACAATGGGTGAGCGTGCTCCA GCTTCTGTGTATGACAATGTGATGCCAATTGCCAAGGAACTGATTGATGA AGCTACTCCAGTTGCTGATCAAAGAGATGGGGATGTGGAGGAGATTGAAA TGGCGCGTTCTGTTCGAAACCGAGCATTTGAAGCAATCGGTGCCCTTTTT TCTACAGTATCCAAAGAAAAGTGTCGTGAGGACGCAGGGCAAGTTGTGGA TATGTTGCTCAAGTACAGCGACACCTCTCGATTCGCACCTTCTGACATTG AATCATATCGTTATATGCAACGCTGCATGGTACGCATTGCTGAAGTGATG GGTGAAGATTTCACTCCGTACTATGAGGATGTTCTCCCACCATTGTTTCG AGTTGCTCGTTCCAAGATTGACGTTGTAGTGCTTGGAGCTGGGGAAGAAT CGCCAGAAGAGCAAAAAGCACTTGGATTCTTGGGCGGAAGTAGCAGTGAT GGAGGCGATATGGCTGTGGAGGGGATGGGTGGAATGGGTGTGGAAGCACG TGGAAATACTGATGACTTGGATGACATGATTGAGACATTGAAAGCATCGG GGTCCGCATCTCGTATGTTGACAGTGGATGCTCATGCTGCAGCACATCGT GCAGCAGCTGTGATGATGTTGTTTGTCTACTCGCAACAATGTGCTGACCA TCTTGGCAAGTGGATTGGTGAAGTTGTTGATGTGATGATTGAAGCCAGCT CTGATCGCATCAATACTTCTGTTCGTTCTGCTGCGATTTGTTCTTTTGCC AAGCTGTTGAAAGCATCTATTGCGAATCGTCATGAAGCTGGTGCTGTAGA CCCACAAGAATTACTCGACGCCATCCTCGAGCTGCTTCTTTCTATGCTTC GAACGGAAACAGTTGCTTCTATGCGCACAAACCTTGCAGAAGTAACATCC AATGTACTGCAAGTTTGC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig71187:31..1098+

>mRNA_M-pyrifera_M_contig71187.16978.1 ID=mRNA_M-pyrifera_M_contig71187.16978.1|Name=mRNA_M-pyrifera_M_contig71187.16978.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1938bp|location=Sequence derived from alignment at M-pyrifera_M_contig71187:31..1098+ (Macrocystis pyrifera P11B4 male)
GACACATGCAGGCCAGTATTTGTTCAAGCTGTTGCCGAACCAGCCGCCAT
CGCTTTGATGGAACTTGCTGCACATGGACACATTCAAGCTCAACAACAAG
CCATCACTGCAGTTTCTGCATTGACCCTCACAATGGGTGAGCGTGCTCCA
GCTTCTGTGTATGACAATGTGATGCCAATTGCCAAGGAACTGATTGATGA
AGCTACTCCAGTTGCTGATCAAAGAGATGGGGATGTGGAGGAGATTGAAA
TGGCGCGTTCTGTTCGAAACCGAGCATTTGAAGCAATCGGTGCCCTTTTT
TCTACAGTATCCAAAGAAAAGTGTCGTGAGGACGCAGGGCAAGTTGTGGA
TATGTTGCTCAAGTACAGCGACACCTCTCGATTCGCACCTTCTGACATTG
AATCATATCGTTATATGCAACGCTGCATGGTACGCATTGCTGAAGTGATG
GGTGAAGATTTCACTCCGTACTATGAGGATGTTCTCCCACCATTGTTTCG
AGTTGCTCGTTCCAAGATTGACGACACATGCAGGCCAGTATTTGTTCAAG
CTGTTGCCGAACCAGCCGCCATCGCTTTGATGGAACTTGCTGCACATGGA
CACATTCAAGCTCAACAACAAGCCATCACTGCAGTTTCTGCATTGACCCT
CACAATGGGTGAGCGTGCTCCAGCTTCTGTGTATGACAATGTGATGCCAA
TTGCCAAGGAACTGATTGATGAAGCTACTCCAGTTGCTGATCAAAGAGAT
GGGGATGTGGAGGAGATTGAAATGGCGCGTTCTGTTCGAAACCGAGCATT
TGAAGCAATCGGTGCCCTTTTTTCTACAGTATCCAAAGAAAAGTGTCGTG
AGGACGCAGGGCAAGTTGTGGATATGTTGCTCAAGTACAGCGACACCTCT
CGATTCGCACCTTCTGACATTGAATCATATCGTTATATGCAACGCTGCAT
GGTACGCATTGCTGAAGTGATGGGTGAAGATTTCACTCCGTACTATGAGG
ATGTTCTCCCACCATTGTTTCGAGTTGCTCGTTCCAAGATTGACGGGATG
GGTGGAATGGGTGTGGAAGCACGTGGAAATACTGATGACTTGGATGACAT
GATTGAGACATTGAAAGCATCGGGGTCCGCATCTCGTATGTTGACAGTGG
ATGCTCATGCTGCAGCACATCGTGCAGCAGCTGTGATGATGTTGTTTGTC
TACTCGCAACAATGTGCTGACCATCTTGGCAAGTGGATTGGTGAAGTTGT
TGATGTGATGATTGAAGCCAGCTCTGATCGCATCAATACTTCTGTTCGTT
CTGCTGCGATTTGTTCTTTTGCCAAGCTGTTGAAAGCATCTATTGCGAAT
CGTCATGAAGCTGGTGCTGTAGACCCACAAGAATTACTCGACGCCATCCT
CGAGCTGCTTCTTTCTATGCTTCGAACGGAAACAGTTGCTTCTATGCGCA
CAAACCTTGCAGAAGTAACATCCAATGTACTGCAAGTTTGCGGGATGGGT
GGAATGGGTGTGGAAGCACGTGGAAATACTGATGACTTGGATGACATGAT
TGAGACATTGAAAGCATCGGGGTCCGCATCTCGTATGTTGACAGTGGATG
CTCATGCTGCAGCACATCGTGCAGCAGCTGTGATGATGTTGTTTGTCTAC
TCGCAACAATGTGCTGACCATCTTGGCAAGTGGATTGGTGAAGTTGTTGA
TGTGATGATTGAAGCCAGCTCTGATCGCATCAATACTTCTGTTCGTTCTG
CTGCGATTTGTTCTTTTGCCAAGCTGTTGAAAGCATCTATTGCGAATCGT
CATGAAGCTGGTGCTGTAGACCCACAAGAATTACTCGACGCCATCCTCGA
GCTGCTTCTTTCTATGCTTCGAACGGAAACAGTTGCTTCTATGCGCACAA
ACCTTGCAGAAGTAACATCCAATGTACTGCAAGTTTGC
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