mRNA_M-pyrifera_M_contig7117.16975.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig7117.16975.1 vs. uniprot
Match: D8UHN3_VOLCA (EXPERA domain-containing protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8UHN3_VOLCA) HSP 1 Score: 103 bits (257), Expect = 8.420e-24 Identity = 51/115 (44.35%), Postives = 79/115 (68.70%), Query Frame = 1 Query: 1 QFHVETNHDYFMAKPTLPWFEGLIWVELLFQVPFFAFATAGFVRRWNAVRIPCIIYGTAAATSLVPILADVLASEKVTDPQRYKLICIYMPWLILPTVLVLVMAADPTPFGPGAA 345 Q+H++TN D+ ++ L WF L+ E+L Q+PFF A+ F++R N +RIPCI+YG+ AT++VPIL++ L S + P+R L+ IY+P+L++P +LV+ MA PFG AA Sbjct: 46 QWHIKTNGDHLVSSNPL-WFVSLVACEILLQLPFFFVASYAFLKRRNWIRIPCIVYGSHVATTMVPILSEFLFSPEA-GPKRLTLVSIYLPYLVVPVLLVVRMAVVERPFGSTAA 158
BLAST of mRNA_M-pyrifera_M_contig7117.16975.1 vs. uniprot
Match: A0A2J7ZRN6_9CHLO (Transmembrane protein 97 n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J7ZRN6_9CHLO) HSP 1 Score: 102 bits (255), Expect = 1.660e-23 Identity = 52/114 (45.61%), Postives = 73/114 (64.04%), Query Frame = 1 Query: 1 QFHVETNHDYFMAKPTLPWFEGLIWVELLFQVPFFAFATAGFVRRWNAVRIPCIIYGTAAATSLVPILADVLASEKVTDPQRYKLICIYMPWLILPTVLVLVMAADPTPFGPGA 342 Q+H++TN D+ ++ + WF L+ E L Q+PFF GF+RR N +R+PCIIYGT AT++VPILAD+L + P+R L IY P+L++P +LVL MA PF A Sbjct: 45 QWHIKTNEDHLVSTNPV-WFVSLVTCETLLQLPFFFVVAYGFIRRANWIRVPCIIYGTHVATTMVPILADILFGPD-SGPKRLTLFWIYFPYLLVPLLLVLRMALVDKPFAAAA 156
BLAST of mRNA_M-pyrifera_M_contig7117.16975.1 vs. uniprot
Match: A0A8J4CRT1_9CHLO (EXPERA domain-containing protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4CRT1_9CHLO) HSP 1 Score: 101 bits (251), Expect = 6.120e-23 Identity = 51/111 (45.95%), Postives = 72/111 (64.86%), Query Frame = 1 Query: 1 QFHVETNHDYFMAKPTLPWFEGLIWVELLFQVPFFAFATAGFVRRWNAVRIPCIIYGTAAATSLVPILADVLASEKVTDPQRYKLICIYMPWLILPTVLVLVMAADPTPFG 333 Q+H++TN D+ + L WF L+ E Q+PFF FAT F++R N +R+P I+YGT ATS+VPIL D+L S + P+R L IY+P+LI+P +LV+ M PFG Sbjct: 46 QWHIKTNGDHLVGTNPL-WFVSLVACECFIQLPFFFFATYAFIKRRNWIRMPSILYGTHVATSMVPILVDILLSPS-SGPKRVTLALIYLPYLIVPLLLVVRMVVTAQPFG 154
BLAST of mRNA_M-pyrifera_M_contig7117.16975.1 vs. uniprot
Match: A0A836BPG6_9CHLO (EXPERA domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836BPG6_9CHLO) HSP 1 Score: 100 bits (249), Expect = 1.300e-22 Identity = 51/126 (40.48%), Postives = 81/126 (64.29%), Query Frame = 1 Query: 1 QFHVETNHDYFMAKPTLPWFEGLIWVELLFQVPFFAFATAGFVRRWNAVRIPCIIYGTAAATSLVPILADVLASEKVTDPQRYKLICIYMPWLILPTVLVLVMAADPTPF---GPGAAHPIQSKRQ 369 Q+H++TN D+ ++ + WF ++W E + Q+PFF A F+++ N +RIPCIIYG+ AT++VPIL D+L + + P ++ L IY+P+LI+P +LV+ MAA P+ G G +SK Q Sbjct: 46 QWHIKTNGDHLVSSNPV-WFVSMVWCETVLQMPFFFVAAWAFIKKANWIRIPCIIYGSHVATTMVPILGDILFGPE-SGPNKHVLAAIYVPYLIVPVLLVIRMAAAEKPWASTGAGKRRGGKSKAQ 169
BLAST of mRNA_M-pyrifera_M_contig7117.16975.1 vs. uniprot
Match: A0A150GYU0_GONPE (EXPERA domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GYU0_GONPE) HSP 1 Score: 100 bits (248), Expect = 1.780e-22 Identity = 51/124 (41.13%), Postives = 80/124 (64.52%), Query Frame = 1 Query: 1 QFHVETNHDYFMAK-PTLPWFEGLIWVELLFQVPFFAFATAGFVRRWNAVRIPCIIYGTAAATSLVPILADVLASEKVTDPQRYKLICIYMPWLILPTVLVLVMAADPTPFGPGAAHPIQSKRQ 369 ++H+E N D+ ++K PT WF L+W E+L+Q+PFF A+ F++R N +R+P IIYG T+++PIL D+L + P+R+ L IY+P+LI+P +L++ MA PFG A KR+ Sbjct: 46 KWHIEMNGDHLVSKNPT--WFVSLVWGEVLYQLPFFFVASYAFIKRRNWIRVPSIIYGAHVVTTMIPILTDILFGPD-SGPKRHTLAAIYVPYLIVPLLLLVRMAVVEQPFGADDASKRGVKRK 166
BLAST of mRNA_M-pyrifera_M_contig7117.16975.1 vs. uniprot
Match: A0A813FG80_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813FG80_POLGL) HSP 1 Score: 98.2 bits (243), Expect = 1.070e-21 Identity = 56/115 (48.70%), Postives = 72/115 (62.61%), Query Frame = 1 Query: 1 QFHVETNHDYFMAKPTLPWFEGLIWVELLFQVPFFAFATAGFVRRW---NAVRIPCIIYGTAAATSLVPILAD-VLASEKV-TDPQRYKLICIYMPWLILPTVLVLVMAADPTPF 330 Q HVE N D+ MA P W L+ ELL Q+PFF FA A F R NA+R+PCIIYGT T+ +PILA VL +E V ++ R+KL +Y+P+L +P +L VM A P PF Sbjct: 52 QIHVEANGDFLMASPP-SWLRSLLAAELLLQLPFFPFAAAAFWRASPADNAMRLPCIIYGTHVVTTQIPILAAIVLDTEHVKSESHRWKLFGMYVPYLAVPLLLTAVMLARPAPF 165
BLAST of mRNA_M-pyrifera_M_contig7117.16975.1 vs. uniprot
Match: A0A2K3E7Z2_CHLRE (EXPERA domain-containing protein n=4 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3E7Z2_CHLRE) HSP 1 Score: 97.4 bits (241), Expect = 1.900e-21 Identity = 49/111 (44.14%), Postives = 66/111 (59.46%), Query Frame = 1 Query: 1 QFHVETNHDYFMAKPTLPWFEGLIWVELLFQVPFFAFATAGFVRRWNAVRIPCIIYGTAAATSLVPILADVLASEKVTDPQRYKLICIYMPWLILPTVLVLVMAADPTPFG 333 Q+H++TN D+ ++ L WF L+W E Q+PFF A F++R N +R+PCIIYG AT++VPIL D+L S L IY P+L LP LV+ MA PFG Sbjct: 45 QWHIKTNGDHLVSTNPL-WFVSLVWCETALQLPFFFVAAYAFIKRANWIRVPCIIYGAHVATTMVPILTDILFSP-AAGSHSPALAAIYAPYLALPLALVIRMAVSAQPFG 153
BLAST of mRNA_M-pyrifera_M_contig7117.16975.1 vs. uniprot
Match: A0A836BQS8_9CHLO (EXPERA domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836BQS8_9CHLO) HSP 1 Score: 97.1 bits (240), Expect = 2.730e-21 Identity = 50/111 (45.05%), Postives = 72/111 (64.86%), Query Frame = 1 Query: 1 QFHVETNHDYFMAKPTLPWFEGLIWVELLFQVPFFAFATAGFVRRWNAVRIPCIIYGTAAATSLVPILADVLASEKVTDPQRYKLICIYMPWLILPTVLVLVMAADPTPFG 333 Q+H++TN D+ +A + WF+ LI EL FQ+PFF AT F+ + N +RIPCIIYG+ AT++VPIL D L + P +Y L I P+L++P +LV+ MA P+G Sbjct: 46 QWHIKTNGDHLVATNPV-WFKSLICCELTFQLPFFFIATYAFITKANWIRIPCIIYGSHVATTVVPILGDFLFGPEA-GPNKYVLASINAPFLVIPLLLVIRMAMVEQPWG 154
BLAST of mRNA_M-pyrifera_M_contig7117.16975.1 vs. uniprot
Match: C1EB28_MICCC (EXPERA domain-containing protein n=2 Tax=Micromonas TaxID=38832 RepID=C1EB28_MICCC) HSP 1 Score: 96.7 bits (239), Expect = 3.640e-21 Identity = 49/112 (43.75%), Postives = 66/112 (58.93%), Query Frame = 1 Query: 4 FHVETNHDYFMAKPTLPWFEGLIWVELLFQVPFFAFATAGFVRRWNAVRIPCIIYGTAAATSLVPILADVLASEKV--TDPQRYKLICIYMPWLILPTVLVLVMAADPTPFG 333 FHV TN D MA P WF+ I ELLFQ+PFF F R N +RIP ++YG AT+L+PILA++L V + R+KL IY+P+L++P + + D PFG Sbjct: 46 FHVRTNSDPLMADPPT-WFKSFILFELLFQLPFFFIGFKAFYERRNWIRIPGVVYGAHTATTLIPILAEILHPATVFPDEAARWKLFLIYLPYLLVPASMAYALGVDDKPFG 156
BLAST of mRNA_M-pyrifera_M_contig7117.16975.1 vs. uniprot
Match: A0A7S0SF29_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SF29_9CHLO) HSP 1 Score: 95.1 bits (235), Expect = 1.630e-20 Identity = 49/111 (44.14%), Postives = 72/111 (64.86%), Query Frame = 1 Query: 4 FHVETNHDYFMAKPTLPWFEGLIWVELLFQVPFFAFATAGFVRRWNAVRIPCIIYGTAAATSLVPILADVLASEKVTDPQ-RYKLICIYMPWLILPTVLVLVMAADPTPFG 333 FH++ +HD MA+ + WF+ LI E+LFQ+PFF F R N VRIP I+YG AT+L+PILA++ S+ + Q R L IY+P+LI+P ++ L++A + PFG Sbjct: 46 FHIDRHHDPLMAQQPV-WFKSLILFEILFQLPFFFVGFYAFYMRRNWVRIPGIVYGVHTATTLLPILAEITYSKAMPTKQARTVLFYIYLPYLIIPALIALLLALEEKPFG 155 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7117.16975.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig7117.16975.1 >prot_M-pyrifera_M_contig7117.16975.1 ID=prot_M-pyrifera_M_contig7117.16975.1|Name=mRNA_M-pyrifera_M_contig7117.16975.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=113bp MAKPTLPWFEGLIWVELLFQVPFFAFATAGFVRRWNAVRIPCIIYGTAAAback to top mRNA from alignment at M-pyrifera_M_contig7117:1035..3678- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig7117.16975.1 ID=mRNA_M-pyrifera_M_contig7117.16975.1|Name=mRNA_M-pyrifera_M_contig7117.16975.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2644bp|location=Sequence derived from alignment at M-pyrifera_M_contig7117:1035..3678- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig7117:1035..3678- >mRNA_M-pyrifera_M_contig7117.16975.1 ID=mRNA_M-pyrifera_M_contig7117.16975.1|Name=mRNA_M-pyrifera_M_contig7117.16975.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=678bp|location=Sequence derived from alignment at M-pyrifera_M_contig7117:1035..3678- (Macrocystis pyrifera P11B4 male)back to top |