mRNA_M-pyrifera_M_contig71105.16962.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig71105.16962.1
Unique NamemRNA_M-pyrifera_M_contig71105.16962.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig71105.16962.1 vs. uniprot
Match: A0A0L0HLR6_SPIPD (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HLR6_SPIPD)

HSP 1 Score: 142 bits (359), Expect = 1.760e-39
Identity = 87/195 (44.62%), Postives = 122/195 (62.56%), Query Frame = 1
Query:   10 RELYGGALQAEVPDCFVDASKVRVIPDHQEVFTDVDTDQCVIIELLSMATDFGEGEGALLAFHHQELARSNDAAGPGQSEVVSTRSLGP-TDLPCIPAEAVGYAGLLLAKQRVAKFRE---EARNEVEVYLAVVRLPRVTTDLLVSLSRPVHVDSKSSSHETMR--AGALG--PAPMEMFATLLRTLKINNWSLF 570
            RELYGGA+  ++P  F+DAS  R +P +QEVF D +TDQ +IIELL +A+D  + E A   FH Q+LA  NDAA   +S V+S   L P T  P +P+    +  +++ +Q V+KFRE    ARN V +Y+AV+R+P VTTDL++S + PV +   SSS   +R   G +G     ME F  +LR L+I +W LF
Sbjct:   15 RELYGGAIVTDIPISFLDASDFREVPSNQEVFVDQNTDQSIIIELLELASDADDAEAA--NFHFQQLAEDNDAA---ESRVLSVEYLDPATVTPSLPSTV--HLSVIVGEQVVSKFREGNPNARNLVAIYMAVLRIPHVTTDLVISYNHPVALGQSSSSATALRESGGHVGVPEVAMENFRNMLRRLRIVDWGLF 202          
BLAST of mRNA_M-pyrifera_M_contig71105.16962.1 vs. uniprot
Match: A0A4P9XZF7_9FUNG (Uncharacterized protein n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XZF7_9FUNG)

HSP 1 Score: 137 bits (346), Expect = 1.990e-37
Identity = 83/200 (41.50%), Postives = 125/200 (62.50%), Query Frame = 1
Query:    7 LRELYGGALQAEVPDCFVDASKV---------RVIPDHQEVFTDVDTDQCVIIELLSMATDFGEGEGALLAFHHQELARSNDAAGPGQSEVVSTRSLGPTDLPCIPAEAVGYAGLLLAKQRVAKFRE---EARNEVEVYLAVVRLPRVTTDLLVSLSRPVHVDSKSSSHETMRAGALGPAPMEMFATLLRTLKINNWSLF 570
            +R+LYGGAL+A VP+ FVD  +V         R +PDHQEVF D +T++ VI+ELL + TD    + A   FH Q++A  N+A    ++++V    L   D+P +P +A+GY  +L   Q VAKFRE   +A N V ++LAV+RLPRV TD+L++++ PV V + SSS +   AG L  A ++   TL+ ++ + +W LF
Sbjct:   18 MRDLYGGALRAMVPERFVDIRQVDGRLVTLQLREVPDHQEVFADTETEESVIVELLELDTDVANEQCA--RFHFQQIAEHNEAV---RAQIVQEAQLTAADMPHLPEDALGY--VLAGDQDVAKFRERSADAINTVRLFLAVLRLPRVGTDVLITVNVPVVVGAASSSRQHWGAGDL-QAGLDHLRTLVGSIDVRDWGLF 209          
BLAST of mRNA_M-pyrifera_M_contig71105.16962.1 vs. uniprot
Match: A0A1Y1Y0C3_9FUNG (Ran GTPase binding protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Y0C3_9FUNG)

HSP 1 Score: 135 bits (341), Expect = 6.070e-37
Identity = 73/190 (38.42%), Postives = 124/190 (65.26%), Query Frame = 1
Query:   10 RELYGGALQAEVPDCFVDASKVRVIPDHQEVFTDVDTDQCVIIELLSMATDFGEGEGALLAFHHQELARSNDAAGPGQSEVVSTRSLGPTDLPCIPAEAVGYAGLLLAKQRVAKFREE---ARNEVEVYLAVVRLPRVTTDLLVSLSRPVHVDSKSSSHETMRAGALGPAPMEMFATLLRTLKINNWSLF 570
            +EL+GGA+   VP  F+D S++R +PD+QEV+ D +TDQ VI+ELL +A +  + + A  ++H +++A  NDA+   +++++    L  +++P +P +A  Y  LL+ +Q ++K+ E    ARN V +YLAV R+P++TTD++VS + PV +   SSS +T +AG++       F  +L +  IN+WSLF
Sbjct:    8 KELFGGAITTYVPTTFIDISQLREVPDNQEVYVDTNTDQSVIVELLELAEEAADADCA--SYHFKQIAEHNDASA--ENQILKVVQLEDSEVPNLPKDAKKY--LLVGRQTISKYNESDPNARNVVNIYLAVFRIPKITTDIIVSYNHPVVIGPTSSSRDT-QAGSVDEVENN-FKKILASFNINDWSLF 189          
BLAST of mRNA_M-pyrifera_M_contig71105.16962.1 vs. uniprot
Match: A0A1Y1X2A2_9FUNG (Ran guanine nucleotide release factor n=1 Tax=Anaeromyces robustus TaxID=1754192 RepID=A0A1Y1X2A2_9FUNG)

HSP 1 Score: 134 bits (338), Expect = 1.490e-36
Identity = 75/190 (39.47%), Postives = 117/190 (61.58%), Query Frame = 1
Query:   10 RELYGGALQAEVPDCFVDASKVRVIPDHQEVFTDVDTDQCVIIELLSMATDFGEGEGALLAFHHQELARSNDAAGPGQSEVVSTRSLGPTDLPCIPAEAVGYAGLLLAKQRVAKFRE---EARNEVEVYLAVVRLPRVTTDLLVSLSRPVHVDSKSSSHETMRAGALGPAPMEMFATLLRTLKINNWSLF 570
            REL+GGA+ A +P+ F DAS VR +PD+QEV+ D++TDQ +I+ELL  A D    E  L  +H ++LA  N A      E++    + P D+P I  +++    L+L KQ ++KF E   +A+N V +YLAV+R+P + TD+L+S + PV++ SKSSS      G    +  E+F  L+++  + +W LF
Sbjct:    3 RELFGGAITASIPETFNDASIVREVPDNQEVYVDINTDQSIIVELLEQAQDASNEECGL--YHFKQLADDNKAEN---YEIIKNEDIVPQDIPNIKIDSIKK--LVLGKQIISKFNEKDADAKNVVNIYLAVIRVPSIETDILISYNCPVYIGSKSSSRTQSVEGQENVSD-EIFKQLIKSFNVADWDLF 184          
BLAST of mRNA_M-pyrifera_M_contig71105.16962.1 vs. uniprot
Match: A0A432ZYY8_9FUNG (Uncharacterized protein n=1 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A432ZYY8_9FUNG)

HSP 1 Score: 134 bits (336), Expect = 3.960e-36
Identity = 81/189 (42.86%), Postives = 115/189 (60.85%), Query Frame = 1
Query:   16 LYGGALQAEVPDCFVDASKVRVIPDHQEVFTDVDTDQCVIIELLSMATDFGEGEGALLAFHHQELARSNDAAGPGQSEVVSTRSLGPTDLPCIPAEAVGYAGLLLAKQRVAKFRE---EARNEVEVYLAVVRLPRVTTDLLVSLSRPVHVDSKSSSHETMRAGALGP-APMEMFATLLRTLKINNWSLF 570
            L+GGA+ A +P  FVD+S  R IPD+QEV+ DV TDQ +IIELL M  +  EGEG +  +H Q+L   NDAA    +++ S  +L P ++P +P  A+    LL   Q + KF E   EA N V + LAV+RLP+VTTD+++S + P+ +  +SSS     A    P A +E F  +L +L I +W LF
Sbjct:   13 LFGGAITAYIPPAFVDSSDFRKIPDNQEVYVDVATDQSIIIELLQMVEE-AEGEG-VARYHFQQLGEDNDAA---DTQITSIVTLSPAEVPNMPPTAIPI--LLTGTQSITKFNESGSEATNFVGILLAVIRLPQVTTDMVISYNLPLAIGPQSSSRVIAAARPASPEAGLEEFKRVLASLLIKDWGLF 194          
BLAST of mRNA_M-pyrifera_M_contig71105.16962.1 vs. uniprot
Match: A0A1Y1VKW1_9FUNG (Mog1p/PsbP-like protein n=1 Tax=Piromyces finnis TaxID=1754191 RepID=A0A1Y1VKW1_9FUNG)

HSP 1 Score: 132 bits (331), Expect = 1.690e-35
Identity = 73/190 (38.42%), Postives = 118/190 (62.11%), Query Frame = 1
Query:   10 RELYGGALQAEVPDCFVDASKVRVIPDHQEVFTDVDTDQCVIIELLSMATDFGEGEGALLAFHHQELARSNDAAGPGQSEVVSTRSLGPTDLPCIPAEAVGYAGLLLAKQRVAKFRE---EARNEVEVYLAVVRLPRVTTDLLVSLSRPVHVDSKSSSHETMRAGALGPAPMEMFATLLRTLKINNWSLF 570
            REL+GGA+ A +P+ F DAS +R +PD+QEV+ D++TDQ +I+ELL  A +    E  L  +H ++LA  N+A      E++    +   D+P I  E++    L+L KQ ++KF E   +A+N V +YLAV+R+P + TD+L+S + PV++ SKSSS    + G    +  E+F  L+++  + +W LF
Sbjct:    3 RELFGGAITAVIPEAFRDASIIREVPDNQEVYVDINTDQSIIVELLEQAEEASNDECGL--YHFKQLAEDNNAEN---FEIIKNEDIISQDIPNIKIESIKK--LVLGKQIISKFNEKDPDAQNIVNIYLAVIRVPSIETDMLISYNCPVYIGSKSSSRTQSKEGQETISD-ELFKQLIKSFNVVDWELF 184          
BLAST of mRNA_M-pyrifera_M_contig71105.16962.1 vs. uniprot
Match: A0A6G0WUJ0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WUJ0_9STRA)

HSP 1 Score: 131 bits (330), Expect = 2.250e-35
Identity = 80/188 (42.55%), Postives = 113/188 (60.11%), Query Frame = 1
Query:   16 LYGGALQAEVPDCFVDASKVRVIPDHQEVFTDVDTDQCVIIELLSMATDFGEGEGALLAFHHQELARSNDAAGPGQSEVVSTRSLGPTDLPCIPAEAVGYAGLLLAKQRVAKFREEARNEVEVYLAVVRLPRVTTDLLVSLSRPVHVDSKSSSHETMRAGALGPAPMEMFATL---LRTLKINNWSLF 570
            LYGGAL  ++P  F D S  R +PD+QEVF +  TD+CVIIELL +             F+ +ELA SN  A PG   ++ T     TDLP +  +A     + + KQ VAKF+E A+N +++Y+A +RLP+VTTDL+VS++ P+ ++  SSS    R G +     E FA L   LRTL +++WSLF
Sbjct:    5 LYGGALSCQIPQGFADVSGFRQVPDNQEVFAEAATDRCVIIELLELEASVQPSASG--EFYFKELADSNGCA-PGDYTILQTLQATETDLPKLGVQA----NIAIGKQNVAKFKEAAKNTMQLYVACIRLPQVTTDLVVSVTVPLALNPNSSS---TRDGQVVTNADEGFAILKEILRTLAVHDWSLF 182          
BLAST of mRNA_M-pyrifera_M_contig71105.16962.1 vs. uniprot
Match: A0A1Y1YS70_9FUNG (Mog1p/PsbP-like protein n=2 Tax=Neocallimastix californiae TaxID=1754190 RepID=A0A1Y1YS70_9FUNG)

HSP 1 Score: 131 bits (330), Expect = 2.380e-35
Identity = 71/190 (37.37%), Postives = 117/190 (61.58%), Query Frame = 1
Query:   10 RELYGGALQAEVPDCFVDASKVRVIPDHQEVFTDVDTDQCVIIELLSMATDFGEGEGALLAFHHQELARSNDAAGPGQSEVVSTRSLGPTDLPCIPAEAVGYAGLLLAKQRVAKFRE---EARNEVEVYLAVVRLPRVTTDLLVSLSRPVHVDSKSSSHETMRAGALGPAPMEMFATLLRTLKINNWSLF 570
            REL+GGA+ A +P+ F DAS +R +PD+QEV+ D++TDQ +I+ELL    +    E  L  +H ++LA  N A      E++    + P D+P I  +++    ++L KQ ++KF E   +A+N V +YLAV+R+P + TD+L+S + PV++ SKSSS    + G    + + +F  LL++  + +W LF
Sbjct:    3 RELFGGAMTALIPEAFSDASIIREVPDNQEVYVDINTDQSIIVELLEQDKEVKNDECGL--YHFKQLAEDNKA---DNYEIIKNEDINPQDIPNIKIDSIKK--IVLGKQIISKFNEKDADAKNIVNIYLAVIRIPSIETDILISYNCPVYIGSKSSSRTQSKEGQENVSDV-IFNQLLKSFNVVDWDLF 184          
BLAST of mRNA_M-pyrifera_M_contig71105.16962.1 vs. uniprot
Match: A0A086TLQ3_9FUNG (Uncharacterized protein n=1 Tax=Podila verticillata NRRL 6337 TaxID=1069443 RepID=A0A086TLQ3_9FUNG)

HSP 1 Score: 131 bits (330), Expect = 3.430e-35
Identity = 80/198 (40.40%), Postives = 114/198 (57.58%), Query Frame = 1
Query:   10 RELYGGALQAEVPDCFVDASKVRVIPDHQEVFTDVDTDQCVIIELLSMATDFGEGEGALLAFHHQELARSNDAAGPGQSEVVSTRSLGPTDLPCIPAEAVGYAGLLLAKQRVAKFRE-----------EARNEVEVYLAVVRLPRVTTDLLVSLSRPVHVDSKSSSHETMRAGALGPAPMEMFATLLRTLKINNWSLF 570
            +ELYGGA+   +P  F + S VR +PDHQEVF +VD DQ VI+E+L +A +  +   A  AFH+Q+LA  NDA     S + +   L   +LP  P EA  Y  LLL +QRVAKF E           + RN V++ + VVRLPR  TD+++S + P+ + + SSS E    G +  A +  F  L+ + K+ +W LF
Sbjct:    6 QELYGGAITMNLPRKFGNISHVREVPDHQEVFVNVDEDQSVIVEILELAAEASDDSCA--AFHYQQLAEDNDAEE--SSTIQNVSILSNAELPSWPTEAKIY--LLLGQQRVAKFNERQRQLESASAEDTRNLVQIMMVVVRLPRQETDIVISYNVPLQIAAASSSREVAHEGDIQEAEV-WFRNLIGSFKVRDWGLF 196          
BLAST of mRNA_M-pyrifera_M_contig71105.16962.1 vs. uniprot
Match: A0A485KZZ0_9STRA (Aste57867_13354 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KZZ0_9STRA)

HSP 1 Score: 130 bits (326), Expect = 9.000e-35
Identity = 77/188 (40.96%), Postives = 111/188 (59.04%), Query Frame = 1
Query:   13 ELYGGALQAEVPDCFVDASKVRVIPDHQEVFTDVDTDQCVIIELLSMATDFGEGEGALLAFHHQELARSNDAAGPGQSEVVSTRSLGPTDLPCIPAEAVGYAGLLLAKQRVAKFREEARNEVEVYLAVVRLPRVTTDLLVSLSRPVHVDSKSSSHETMRAGALGPAP--MEMFATLLRTLKINNWSLF 570
            +LYGGAL  E+P  F D S+ R +PD+QEVF +  TD+CVI+ELL +         A   FH  ELA SN  A P    ++ T     TDLP +       A + + KQ VAKF+E A+N +++Y+  +RLP VTTDL+VS++ P+ ++  SSS  T     +G A   + +   +LRT+ ++NWSLF
Sbjct:    4 DLYGGALSCEIPQGFADVSEFRQVPDNQEVFAEAATDRCVIVELLELEASVPLESSAEYYFH--ELAESNGCA-PNDVTILQTCQATETDLPSLRV----IANIAIGKQCVAKFKEAAKNIMQLYVCCIRLPNVTTDLVVSVTVPLALNPDSSS--TRDGQIIGNADDGLSILKDILRTITVHNWSLF 182          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig71105.16962.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0L0HLR6_SPIPD1.760e-3944.62Uncharacterized protein n=2 Tax=Spizellomyces TaxI... [more]
A0A4P9XZF7_9FUNG1.990e-3741.50Uncharacterized protein n=1 Tax=Thamnocephalis sph... [more]
A0A1Y1Y0C3_9FUNG6.070e-3738.42Ran GTPase binding protein n=1 Tax=Basidiobolus me... [more]
A0A1Y1X2A2_9FUNG1.490e-3639.47Ran guanine nucleotide release factor n=1 Tax=Anae... [more]
A0A432ZYY8_9FUNG3.960e-3642.86Uncharacterized protein n=1 Tax=Jimgerdemannia fla... [more]
A0A1Y1VKW1_9FUNG1.690e-3538.42Mog1p/PsbP-like protein n=1 Tax=Piromyces finnis T... [more]
A0A6G0WUJ0_9STRA2.250e-3542.55Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A1Y1YS70_9FUNG2.380e-3537.37Mog1p/PsbP-like protein n=2 Tax=Neocallimastix cal... [more]
A0A086TLQ3_9FUNG3.430e-3540.40Uncharacterized protein n=1 Tax=Podila verticillat... [more]
A0A485KZZ0_9STRA9.000e-3540.96Aste57867_13354 protein n=1 Tax=Aphanomyces stella... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig71105contigM-pyrifera_M_contig71105:235..810 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score142.5
Seed ortholog evalue2e-31
Seed eggNOG ortholog109760.SPPG_02509T0
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006606,GO:0006810,GO:0006886,GO:0006913,GO:0008104,GO:0008150,GO:0008536,GO:0015031,GO:0015833,GO:0017016,GO:0017038,GO:0019899,GO:0031267,GO:0033036,GO:0033365,GO:0034504,GO:0034613,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464,GO:0045184,GO:0046907,GO:0051020,GO:0051169,GO:0051170,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0070727,GO:0071702,GO:0071705,GO:0072594
EggNOG free text desc.conserved nuclear protein that interacts with GTP-Gsp1p, which is a Ran homolog of the Ras GTPase family, and stimulates nucleotide release, involved in nuclear protein import, nucleotide release is inhibited by Yrb1p
EggNOG OGs39WSG@33154,3NXUZ@4751,KOG3329@1,KOG3329@2759
COG Functional cat.T
Best tax levelFungi
Best eggNOG OGNA|NA|NA
Exons1
Model size576
Cds size576
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816605.491681-CDS-M-pyrifera_M_contig71105:234..8101622816605.491681-CDS-M-pyrifera_M_contig71105:234..810Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig71105 235..810 +
1692278073.1760316-CDS-M-pyrifera_M_contig71105:234..8101692278073.1760316-CDS-M-pyrifera_M_contig71105:234..810Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig71105 235..810 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig71105.16962.1prot_M-pyrifera_M_contig71105.16962.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig71105 235..810 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig71105.16962.1

>prot_M-pyrifera_M_contig71105.16962.1 ID=prot_M-pyrifera_M_contig71105.16962.1|Name=mRNA_M-pyrifera_M_contig71105.16962.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=192bp
MGLRELYGGALQAEVPDCFVDASKVRVIPDHQEVFTDVDTDQCVIIELLS
MATDFGEGEGALLAFHHQELARSNDAAGPGQSEVVSTRSLGPTDLPCIPA
EAVGYAGLLLAKQRVAKFREEARNEVEVYLAVVRLPRVTTDLLVSLSRPV
HVDSKSSSHETMRAGALGPAPMEMFATLLRTLKINNWSLFM*
back to top

mRNA from alignment at M-pyrifera_M_contig71105:235..810+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig71105.16962.1 ID=mRNA_M-pyrifera_M_contig71105.16962.1|Name=mRNA_M-pyrifera_M_contig71105.16962.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=576bp|location=Sequence derived from alignment at M-pyrifera_M_contig71105:235..810+ (Macrocystis pyrifera P11B4 male)
ATGGGACTGAGAGAGCTGTACGGAGGGGCCCTCCAGGCGGAGGTGCCTGA CTGCTTTGTGGACGCCAGCAAAGTGCGCGTGATTCCAGACCACCAAGAGG TCTTCACGGACGTGGACACGGACCAGTGTGTCATCATCGAGCTGCTGTCC ATGGCCACCGACTTTGGCGAGGGTGAGGGGGCGCTGCTGGCCTTCCACCA CCAGGAGCTGGCGCGCAGCAACGACGCCGCCGGCCCAGGCCAGAGCGAAG TGGTCTCCACGCGCAGCCTGGGGCCTACCGACCTGCCCTGCATCCCCGCA GAGGCCGTTGGCTACGCAGGCTTGCTGCTGGCCAAGCAGAGGGTGGCCAA GTTCCGGGAGGAGGCGAGGAACGAAGTGGAGGTGTACCTCGCCGTCGTGC GCCTGCCCCGCGTCACGACAGACCTCCTGGTGAGTCTCTCGCGGCCCGTG CACGTGGACAGCAAGAGCTCCAGCCACGAGACAATGCGGGCGGGCGCATT GGGCCCCGCGCCCATGGAGATGTTCGCGACCCTCCTCCGCACCCTGAAGA TCAACAACTGGAGCCTCTTCATGTGA
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig71105:235..810+

>mRNA_M-pyrifera_M_contig71105.16962.1 ID=mRNA_M-pyrifera_M_contig71105.16962.1|Name=mRNA_M-pyrifera_M_contig71105.16962.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1152bp|location=Sequence derived from alignment at M-pyrifera_M_contig71105:235..810+ (Macrocystis pyrifera P11B4 male)
ATGGGACTGAGAGAGCTGTACGGAGGGGCCCTCCAGGCGGAGGTGCCTGA
CTGCTTTGTGGACGCCAGCAAAGTGCGCGTGATTCCAGACCACCAAGAGG
TCTTCACGGACGTGGACACGGACCAGTGTGTCATCATCGAGCTGCTGTCC
ATGGCCACCGACTTTGGCGAGGGTGAGGGGGCGCTGCTGGCCTTCCACCA
CCAGGAGCTGGCGCGCAGCAACGACGCCGCCGGCCCAGGCCAGAGCGAAG
TGGTCTCCACGCGCAGCCTGGGGCCTACCGACCTGCCCTGCATCCCCGCA
GAGGCCGTTGGCTACGCAGGCTTGCTGCTGGCCAAGCAGAGGGTGGCCAA
GTTCCGGGAGGAGGCGAGGAACGAAGTGGAGGTGTACCTCGCCGTCGTGC
GCCTGCCCCGCGTCACGACAGACCTCCTGGTGAGTCTCTCGCGGCCCGTG
CACGTGGACAGCAAGAGCTCCAGCCACGAGACAATGCGGGCGGGCGCATT
GGGCCCCGCGCCCATGGAGATGTTCGCGACCCTCCTCCGCACCCTGAAGA
TCAACAACTGGAGCCTCTTCATGTGAATGGGACTGAGAGAGCTGTACGGA
GGGGCCCTCCAGGCGGAGGTGCCTGACTGCTTTGTGGACGCCAGCAAAGT
GCGCGTGATTCCAGACCACCAAGAGGTCTTCACGGACGTGGACACGGACC
AGTGTGTCATCATCGAGCTGCTGTCCATGGCCACCGACTTTGGCGAGGGT
GAGGGGGCGCTGCTGGCCTTCCACCACCAGGAGCTGGCGCGCAGCAACGA
CGCCGCCGGCCCAGGCCAGAGCGAAGTGGTCTCCACGCGCAGCCTGGGGC
CTACCGACCTGCCCTGCATCCCCGCAGAGGCCGTTGGCTACGCAGGCTTG
CTGCTGGCCAAGCAGAGGGTGGCCAAGTTCCGGGAGGAGGCGAGGAACGA
AGTGGAGGTGTACCTCGCCGTCGTGCGCCTGCCCCGCGTCACGACAGACC
TCCTGGTGAGTCTCTCGCGGCCCGTGCACGTGGACAGCAAGAGCTCCAGC
CACGAGACAATGCGGGCGGGCGCATTGGGCCCCGCGCCCATGGAGATGTT
CGCGACCCTCCTCCGCACCCTGAAGATCAACAACTGGAGCCTCTTCATGT
GA
back to top