mRNA_M-pyrifera_M_contig71.16945.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig71.16945.1
Unique NamemRNA_M-pyrifera_M_contig71.16945.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig71.16945.1 vs. uniprot
Match: D8LGK0_ECTSI (MPAB_Lcp_cat domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGK0_ECTSI)

HSP 1 Score: 389 bits (999), Expect = 5.640e-131
Identity = 193/362 (53.31%), Postives = 253/362 (69.89%), Query Frame = 1
Query:    1 GLALLTTYIGILQLLRFRRVRGL-KFMDVKTDPSAVYRETAMLEFPFTVSKALEFAQFRAFGVPSISKLMHKTGEFCKRSGKRYDDTDLLFREFWENDTETNRSKISIARINAIHGLYSKQISNSDMLYTLCLFITEPAAWIDRYEWRRCTDIEKAGLLGHFALLGERMGIKGSRDWKTWDDALAFQLAYETEHFQYHESNNALAVSTLDLFISNVPT-AFQWAARWAVYALMDPFLLKTMGLPQVPNLLRWAVTGGLLLRAMIVRFLLPPRPEFLVSRRTPFAD--DANITPQCCMKPRYEYYTDPKLSCMTYKDGYRIGDLGTSACPAGRLMYDVPTFTGHGGGGRGGVAAGAADEAPIA 1074
            GLA L  Y+G++QLLRFRR+R L K +D K D S V R+   LEFPF ++K+LEFA F  +GVPSISKL+ KTGEF K  GKRYDDTD + RE+ E+  + +R + ++ R+NAIH +Y+K+ISN+DML+TL  F+T  A WI+RY WRRCTD+E   LL H+  +G RMGIKG   WKTW DA  FQ AY  EHF++  SN A+A  T+DLF+S VP+ A Q AARW VYAL+DP LLK  G P  P LL+W + G L +RA+ +RFLLPPRP+F+  RRTP +   +   +    +KP Y+ + D +L C+ Y+DGY+I DLG + CPAGRL   +P++TG GGGG G V  GA   +P+A
Sbjct:   13 GLAALAVYLGVVQLLRFRRIRRLRKSLDAKEDCSEVVRQMVQLEFPFLMTKSLEFALFATYGVPSISKLLDKTGEFRKHVGKRYDDTDFILREYLESGKDGDRGRTAMGRLNAIHSMYAKEISNADMLFTLSQFVTARALWINRYGWRRCTDLETEALLAHYGEMGRRMGIKGVDSWKTWQDADDFQAAYAKEHFRFAASNAAIAGVTVDLFVSLVPSKALQSAARWGVYALIDPPLLKAFGFPTAPTLLQWFMKGSLWMRALFIRFLLPPRPDFMAVRRTPLSGVAEGESSSDVLVKPVYDPFHDVQLGCLYYRDGYKIEDLGPATCPAGRLFEGLPSYTGKGGGGSGPVICGADGTSPLA 374          
BLAST of mRNA_M-pyrifera_M_contig71.16945.1 vs. uniprot
Match: A0A6H5K0Q2_9PHAE (MPAB_Lcp_cat domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0Q2_9PHAE)

HSP 1 Score: 335 bits (860), Expect = 1.460e-109
Identity = 172/360 (47.78%), Postives = 233/360 (64.72%), Query Frame = 1
Query:    1 GLALLTTYIGILQLLRFRRVRGLKFMDVKTDPSAVYRETAMLEFPFTVSKALEFAQFRAFGVPSISKLMHKTGEFCKRSGKRYDDTDLLFREFWENDTETNRSKISIARINAIHGLYSKQISNSDMLYTLCLFITEPAAWIDRYEWRRCTDIEKAGLLGHFALLGERMGIKGSRDWKTWDDALAFQLAYETEHFQYHESNNALAVSTLDLFISNVPTAFQWAARWAVYALMDPFLLKTMGLPQVPNLLRWAVTGGLLLRAMIVRFLLPPRPEFLVSRRTPFADDANITPQCCMK----------------PRYEYYTDPKLSCMTYKDGYRIGDLGTSACPAGRLMYD-VPTFTGHGGGG 1029
            GL  L  Y+ I++LLRFRRVRG+K  DV  DPS ++R+T +LEFP T  KALE    R FG+PS + + HK+  F   +GKRYDDTDLL +E++EN TE++R+ I++AR+NAIH ++S QISN+D+LY+L LF T PA  IDR EWRRCTDIEKA  L ++ + GER+GIKG+R+WKTWDDA A   +YE E+FQ  E    L    +DL +S+VP+  +   R  V  L+DP LL+ +GL + P LL+W     + LRAM++ +L+PPR     +RRTP +    +  QC                   P++  + D K  C+ YK+GY+I ++GT  CPAGRLM   VP FTG G GG
Sbjct:   35 GLTALAAYMAIIRLLRFRRVRGMKLSDVDRDPSEIFRKTTLLEFPATSQKALELMLIRTFGIPSAAAVFHKSRSFV-HAGKRYDDTDLLLKEYFENHTESDRANIAVARVNAIHEVFSSQISNADILYSLALFTTLPAILIDRLEWRRCTDIEKAAFLAYYQIYGERLGIKGAREWKTWDDAHAHAQSYEAEYFQRSEGVEELVNQNMDLLLSSVPSFLKPLGRKVVCVLLDPPLLEVLGLSEAPLLLKWFSNAAIKLRAMVLLYLVPPR--LFPARRTPASRLGCVPSQCLASNAGGVKSAEDADVVRVPQFSQFHDAKQGCLFYKNGYQIKNVGTRKCPAGRLMEKGVPVFTGTGAGG 391          
BLAST of mRNA_M-pyrifera_M_contig71.16945.1 vs. uniprot
Match: D8LBZ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBZ0_ECTSI)

HSP 1 Score: 239 bits (609), Expect = 4.210e-74
Identity = 115/222 (51.80%), Postives = 155/222 (69.82%), Query Frame = 1
Query:   67 LKFMDVKTDPSAVYRETAMLEFPFTVSKALEFAQFRAFGVPSISKLMHKTGEFCKRSGKRYDDTDLLFREFWENDTETNRSKISIARINAIHGLYSKQISNSDMLYTLCLFITEPAAWIDRYEWRRCTDIEKAGLLGHFALLGERMGIKGSRDWKTWDDALAFQLAYETEHFQYHESNNALAVSTLDLFISNVPTAFQWAARWAVYALMDPFLLKTMGLPQV 732
            +K  DV  DPS ++R+T +LEFP T  KALE    R FG+PS + + HK+  F   +GKRYDDTDLL +E++EN TE+NR+  ++AR+NAIH ++S QISN+D+LY+L LF T PA  IDR EWRRCTDIEKA  L ++ + GER+GIKG+R+WK WDDA A   AYE E+FQ  +    L    +DL +S+VP+  +   R AV  L+DP LL+ +GL +V
Sbjct:    1 MKLSDVDRDPSEIFRKTTLLEFPATSQKALELMLIRTFGIPSAAAVFHKSRSFV-HAGKRYDDTDLLLKEYFENHTESNRANTAVARVNAIHEVFSSQISNADILYSLALFATLPAILIDRLEWRRCTDIEKAAFLAYYQIYGERLGIKGAREWKIWDDAHAHAQAYEAEYFQRSDGVEELVNQNMDLLLSSVPSFLKPLGRKAVCVLLDPPLLEVLGLSEV 221          
BLAST of mRNA_M-pyrifera_M_contig71.16945.1 vs. uniprot
Match: A0A494SSX0_9NOCA (DUF2236 domain-containing protein n=1 Tax=Rhodococcus sp. P1Y TaxID=1302308 RepID=A0A494SSX0_9NOCA)

HSP 1 Score: 190 bits (482), Expect = 3.370e-54
Identity = 124/310 (40.00%), Postives = 162/310 (52.26%), Query Frame = 1
Query:   46 RFRRVRGLKFMDVKTDPSAVYRETAMLEFPFTVSKALEFAQFRAFGVPSISKLMHKTGEFCKRSGKRYDDTDLLFREFWENDTETNRSKISIARINAIHGLYSKQISNSDMLYTLCLFITEPAAWIDRYEWRRCTDIEKAGLLGHFALLGERMGIKGSRDWKTWDDALAFQLAYETEHFQYHESNNALAVSTLDLFISNVPTAFQWAARWAVYALMDPFLLKTMGLPQVPNLLRWAVTGGLLLRAMIVRFLLPPRPEFLVSRRTPFADDANITPQCCMKPRYEYYTDPKLSCMTYKDGYRIGDLGTSACP 975
            R+  +R ++ +D  +D  A++R TA  EFP+   +ALEFA FR + VP+IS L+ KTGEF  R  KRYDDT LL  E  E+  ++ R + S+  +N +HG YS  IS  DMLY L  FI EP  WID Y WRR    E+      +  +G RMGIK   +  ++ +   F+L YE   F+Y E N+ +   TLDLF S  P A Q A +  VYALMD  +    G P     LR A   GL L+A   RF+    P+ L SR T   DD               +T P      Y  GYR  DLG + CP
Sbjct:    9 RYGWLRRIEELDPVSDCHAIHRITAGYEFPWDYQRALEFALFRTYCVPTISALLEKTGEFGNRPQKRYDDTSLLMAEILEHGYDSERGRESLRTVNRMHGKYS--ISGDDMLYVLTTFIYEPIEWIDTYGWRRLHPKERLATFHFYRQVGIRMGIKNIPE--SYTEFAQFKLDYEERTFRYTEDNHKVGTYTLDLFCSWFPKALQPAVQQGVYALMDDRMAGAFGFPAGSPTLRKAAVAGLRLKARGERFM----PKRLSSRTT---DDPGN------------HTYPG-----YPVGYRPEDLGVATCP 290          
BLAST of mRNA_M-pyrifera_M_contig71.16945.1 vs. uniprot
Match: UPI001AE714A2 (oxygenase MpaB family protein n=2 Tax=Crossiella equi TaxID=130796 RepID=UPI001AE714A2)

HSP 1 Score: 187 bits (476), Expect = 1.290e-53
Identity = 123/305 (40.33%), Postives = 158/305 (51.80%), Query Frame = 1
Query:   46 RFRRVRGLKFMDVKTDPSAVYRETAMLEFPFTVSKALEFAQFRAFGVPSISKLMHKTGEFCKRSGKRYDDTDLLFREFWENDTETNRSKISIARINAIHGLYSKQISNSDMLYTLCLFITEPAAWIDRYEWRRCTDIEKAGLLGHFALLGERMGIKGSRDWKTWDDALAFQLAYETEHFQYHESNNALAVSTLDLFISNVPTAFQWAARWAVYALMDPFLLKTMGLPQVPNLLRWAVTGGLLLRAMIVRFLLPPRPEFLVSRRTPFADDANITPQCCMKPRYEYYTDPKLSCMTYKDGYRIGDLG 960
            R+RR+  ++ +D   D   +YR +A  EFP+   KALEFA FR + VPSIS+L+ +TGEF  R  +RYDDT LL  E  E+  ++ R K S+ RIN +HG Y   I+N DMLY L  FI EP  W+ R+ WR     E+      +  +G RMGIK   +   +D+   F   YE  HFQY E+N  +   T+DLF S  P A +   R AVYA MD  L    G P+ P  LR  V G L  R   V +L    PE  VSR    AD           PR   Y         Y +GYR+ DLG
Sbjct:    3 RYRRLDLIRGLDPVRDHWEIYRLSAGFEFPWDYRKALEFALFRTYAVPSISRLLARTGEFEHRPQRRYDDTLLLMAELTEHGYDSERGKQSLRRINQMHGRYD--ITNDDMLYVLTTFIYEPIRWLARHGWRPLHQHERLAAFHFYREVGRRMGIKHIPE--DYDELDRFNRDYERTHFQYTETNQRVGEYTVDLFCSWYPAAVRAGVRRAVYAAMDEPLRVAFGFPEQPPWLRKVVAGALTWRGRAVWWL----PERKVSRTA--AD-----------PRNRTYPG-------YPEGYRVADLG 279          
BLAST of mRNA_M-pyrifera_M_contig71.16945.1 vs. uniprot
Match: A0A8H3XEX8_GIGMA (DUF2236 domain-containing protein n=1 Tax=Gigaspora margarita TaxID=4874 RepID=A0A8H3XEX8_GIGMA)

HSP 1 Score: 187 bits (474), Expect = 2.200e-52
Identity = 118/327 (36.09%), Postives = 172/327 (52.60%), Query Frame = 1
Query:   70 KFMDVKTDPSAVYRETAM---LEFPFTVSKALEFAQFRAFGVPSISKLMHKTGEFCKRSGKRYDDTDLLFREFWENDTETNRSKISIARINAIHGLYSKQISNSDMLYTLCLFITEPAAWIDRYEWRRCTDIEKAGLLGHFALLGERMGIKGSRDWKTWDDALAFQLAYETEHFQYHESNNALAVSTLDLFISNVPTAFQWAARWAVYALMDPFLLKTMGLPQVPNLLRWAVTGGLLLRAMIVRFLLPPR----------PEFLVSRRTP--------FADDANITPQCCMKPRYEYYTDPKLSCMTYKDGYRIGDLGTSACPAGRL 987
            K+  VK +  A +  T M   LE PF   K+LEFA FR  G+P+ISK++  TGE     GKRYDDTDL+ REF EN  +++R+K +I R+N IH  Y   I N +M+YTL LFI EP  WI+ + WR+  DIE   +  ++  +G RMGIK      T+DD + F+  +E ++  Y +SN A    ++ LF+S VP   Q  AR  +Y+L+D      M  P+ P  L + +   L  RA+ +R+L+ PR          P  +   + P        F  D   + +  + PR+  Y        TY +GY+I +LG      G+L
Sbjct:   31 KYSSVKNNHEAAFEITYMTSKLELPFISVKSLEFAFFRVLGIPNISKIIGSTGEMVYHCGKRYDDTDLIIREFCENPLDSDRAKTAIKRMNFIHKFYP--IENQEMVYTLSLFICEPPRWINEFGWRKLMDIETEAIYEYWKEIGIRMGIKEIPP--TYDDMVKFKEDFEAKYMIYSKSNPAATEGSIRLFLSPVPPFLQPFARKIIYSLLDDHFRIAMDYPKQPTWLVFLIKFLLKTRALFIRYLMLPRAIPIARVPDKPILMTGNKYPNNHICATNFNSDEMESSKIYI-PRFHPYEH------TYLNGYKIEELGPKKFEKGKL 346          
BLAST of mRNA_M-pyrifera_M_contig71.16945.1 vs. uniprot
Match: UPI001C5DDB88 (oxygenase MpaB family protein n=1 Tax=Roseobacter sp. YSTF-M11 TaxID=2859783 RepID=UPI001C5DDB88)

HSP 1 Score: 183 bits (465), Expect = 7.850e-52
Identity = 120/298 (40.27%), Postives = 157/298 (52.68%), Query Frame = 1
Query:   91 DPSAVYRETAML----EFPFTVSKALEFAQFRAFGVPSISKLMHKTGEFCKRSGKRYDDTDLLFREFWENDTETNRSKISIARINAIHGLYSKQISNSDMLYTLCLFITEPAAWIDRYEWRRCTDIEKAGLLGHFALLGERMGIKGSRDWKTWDDALAFQLAYETEHFQYHESNNALAVSTLDLFIS-NVPTAFQWAARWAVYALMDPFLLKTMGLPQVPNLLRWAVTGGLLLRAMIVRFLLPPR--PEFLVSRRTPFADDANITPQCCMKPRYEYYTDPKLSCMTYKDGYRIGDLGT 963
            DP   Y E A      EF + + +ALEFA FR +G+P+IS L+ KTGEF  R  KRYDDT+L+  E  EN  ++ R K +IAR+NA+H  +  +I NSDMLY L  FI EP  W+DRY  R  T  E+     ++  LGERMGIKG       +  + +  AYE  +F++ E+N  ++ +T+ L +   +P    WA R AV AL+DP LL  MGL  VP          L +RA I+R LLPPR  P  L  R  P                            TY +GYRI DLGT
Sbjct:   14 DPEQDYEEIARFLYAYEFSWDIERALEFALFRTYGIPAISGLLAKTGEFETRPRKRYDDTELILAETIENGLDSRRGKRAIARMNAMHNRF--RIDNSDMLYVLSTFICEPIRWLDRYGRRPMTPREQRAWFLYYRGLGERMGIKGIP--MELETIMYWNEAYEVTNFRFAETNRRISEATIRLLLGFYLPRWLFWAGRPAVRALLDPALLDAMGLRPVPRWFSRVTVAALRMRAGILR-LLPPRRKPRLLTQRPRP----------------------------TYPEGYRIEDLGT 278          
BLAST of mRNA_M-pyrifera_M_contig71.16945.1 vs. uniprot
Match: A0A4D4JCX0_9PSEU (Peptidase n=1 Tax=Gandjariella thermophila TaxID=1931992 RepID=A0A4D4JCX0_9PSEU)

HSP 1 Score: 183 bits (464), Expect = 1.270e-51
Identity = 118/309 (38.19%), Postives = 158/309 (51.13%), Query Frame = 1
Query:   58 VRGLKFMDVKTDPSAVYRETAMLEFPFTVSKALEFAQFRAFGVPSISKLMHKTGEFCKRSGKRYDDTDLLFREFWENDTETNRSKISIARINAIHGLYSKQISNSDMLYTLCLFITEPAAWIDRYEWRRCTDIEKAGLLGHFALLGERMGIKGSRDWKTWDDA--LAFQLAYETEHFQYHESNNALAVSTLDLFISNVPTAFQWAARWAVYALMDPFLLKTMGLPQVPNLLRWAVTGGLLLRAMIVRFLLPPRPEFLVSRRTPFADDANITPQCCMKPRYEYYTDPKLSCMTYKDGYRIGDLGTSACPA 978
            +R ++ +D   D   +YR +A  EFP+  ++ALEFA FR + VPSIS L+  TGEF KR+ KRYDDT LL +E  E+  ++ R + +I  IN +HG Y+  ISN DM Y L  F+ +P  WIDR+ WRR  + E+     HF  +G RM IK        DDA    F+  YE EHF+Y ++N  +   TLDLF S  P   + A   A   L+DP +L   G P  P  +      GL  R+ +VR LLP R    ++R                +PR   Y         Y  GY  GDLG    PA
Sbjct:    6 LRRIQRLDPVADHQEIYRISAGFEFPWDYTRALEFALFRTYCVPSISGLLAATGEFEKRTQKRYDDTSLLMQEISEHGYDSPRGREAIRMINRMHGRYA--ISNDDMRYVLSTFVYDPIDWIDRFGWRRLHEHERLAAFHHFRAIGARMAIKDIPA----DDAEFRRFKTDYEREHFRYSDTNRQIGGYTLDLFCSWYPRPLRPAVATAARGLLDPAMLAAFGFPPAPAWVGPVARAGLRARSAVVR-LLPRRRRSRLTR----------------EPRNRTYRG-------YPHGYTPGDLGAPEPPA 284          
BLAST of mRNA_M-pyrifera_M_contig71.16945.1 vs. uniprot
Match: A0A7W7C3W0_9PSEU (MPAB_Lcp_cat domain-containing protein n=2 Tax=Crossiella TaxID=130795 RepID=A0A7W7C3W0_9PSEU)

HSP 1 Score: 182 bits (461), Expect = 2.200e-51
Identity = 120/309 (38.83%), Postives = 160/309 (51.78%), Query Frame = 1
Query:   46 RFRRVRGLKFMDVKTDPSAVYRETAMLEFPFTVSKALEFAQFRAFGVPSISKLMHKTGEFCKRSGKRYDDTDLLFREFWENDTETNRSKISIARINAIHGLYSKQISNSDMLYTLCLFITEPAAWIDRYEWRRCTDIEKAGLLGHFALLGERMGIK----GSRDWKTWDDALAFQLAYETEHFQYHESNNALAVSTLDLFISNVPTAFQWAARWAVYALMDPFLLKTMGLPQVPNLLRWAVTGGLLLRAMIVRFLLPPRPEFLVSRRTPFADDANITPQCCMKPRYEYYTDPKLSCMTYKDGYRIGDLG 960
            R+RR+  ++ +D   D   +YR +A  EFP+   KALEFA FR + VPSIS L+ KT EF +R  +RYDDT LL     E+  ++   + ++ RIN +HG Y+  I N DMLY L  F+ EP  W+ +Y WR   + E+      +  +G RMGIK    G R+++      AF   YE EHF Y +SN  +  +T+DLF S  P   + A R AVYA MD  LL+  G P+ P  L  AV  GL  R  +VR L  P   +  S R P     N T           Y         Y +GYRI DLG
Sbjct:    3 RYRRLEIIRRLDPVEDHWEIYRLSASFEFPWDYRKALEFALFRTYAVPSISALLDKTREFARRPQRRYDDTLLLMGALTEHGYDSAPGRAALRRINQMHGRYA--IGNEDMLYVLSTFVYEPIRWLGKYGWRAPHEHERLAAFHFYREVGSRMGIKDIPAGYREFE------AFNRDYEREHFHYRDSNQRVGTATVDLFCSWYPAIGRPAVRRAVYAAMDEPLLRAFGFPRQPAWLERAVERGLAGRGRLVRHL--PVRRYSRSARDP----GNRT-----------YPG-------YPEGYRITDLG 279          
BLAST of mRNA_M-pyrifera_M_contig71.16945.1 vs. uniprot
Match: UPI0009343EC6 (DUF2236 domain-containing protein n=1 Tax=Rhodococcus yunnanensis TaxID=278209 RepID=UPI0009343EC6)

HSP 1 Score: 181 bits (460), Expect = 7.120e-51
Identity = 118/310 (38.06%), Postives = 156/310 (50.32%), Query Frame = 1
Query:   46 RFRRVRGLKFMDVKTDPSAVYRETAMLEFPFTVSKALEFAQFRAFGVPSISKLMHKTGEFCKRSGKRYDDTDLLFREFWENDTETNRSKISIARINAIHGLYSKQISNSDMLYTLCLFITEPAAWIDRYEWRRCTDIEKAGLLGHFALLGERMGIKGSRDWKTWDDALAFQLAYETEHFQYHESNNALAVSTLDLFISNVPTAFQWAARWAVYALMDPFLLKTMGLPQVPNLLRWAVTGGLLLRAMIVRFLLPPRPEFLVSRRTPFADDANITPQCCMKPRYEYYTDPKLSCMTYKDGYRIGDLGTSACP 975
            R+  VR ++ MD   D  A++R TA  EFP+   +ALEFA FR + VPSIS+L+ KTGEF  R  KRYDDT LL  E  E+  ++ R + S+ ++N +HG Y+  IS  DMLY L  F+ EP  WID Y WRR    E+      +  +G RMGIK   +  ++ +   F+L YE + F+Y + N+ +   TLDLF S  P     A R  VYALMD  +    G P     LR      L  +A   RF+    P+   SR T   DDA          R + Y         Y    R  DLG   CP
Sbjct:    9 RYGWVRRIEEMDPVADCHAIHRITAGYEFPWDYQRALEFALFRTYCVPSISELLEKTGEFANRPQKRYDDTSLLMAEMLEHGYDSERGRESLRQVNRMHGQYA--ISGDDMLYVLSTFVYEPIEWIDTYGWRRLHPKERLATFHFYRQVGIRMGIKNIPE--SYTEFAEFKLDYEEDKFRYTDDNHKVGTYTLDLFCSWFPAPLHPAVRQGVYALMDDRMAHAFGFPAGSPALRRVAVASLRAKARAERFM----PKRTQSRTT---DDA----------RNKTYPG-------YPGNVRPKDLGAINCP 290          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig71.16945.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGK0_ECTSI5.640e-13153.31MPAB_Lcp_cat domain-containing protein n=2 Tax=Ect... [more]
A0A6H5K0Q2_9PHAE1.460e-10947.78MPAB_Lcp_cat domain-containing protein n=1 Tax=Ect... [more]
D8LBZ0_ECTSI4.210e-7451.80Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A494SSX0_9NOCA3.370e-5440.00DUF2236 domain-containing protein n=1 Tax=Rhodococ... [more]
UPI001AE714A21.290e-5340.33oxygenase MpaB family protein n=2 Tax=Crossiella e... [more]
A0A8H3XEX8_GIGMA2.200e-5236.09DUF2236 domain-containing protein n=1 Tax=Gigaspor... [more]
UPI001C5DDB887.850e-5240.27oxygenase MpaB family protein n=1 Tax=Roseobacter ... [more]
A0A4D4JCX0_9PSEU1.270e-5138.19Peptidase n=1 Tax=Gandjariella thermophila TaxID=1... [more]
A0A7W7C3W0_9PSEU2.200e-5138.83MPAB_Lcp_cat domain-containing protein n=2 Tax=Cro... [more]
UPI0009343EC67.120e-5138.06DUF2236 domain-containing protein n=1 Tax=Rhodococ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig71contigM-pyrifera_M_contig71:39582..46788 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score389.4
Seed ortholog evalue1.8e-105
Seed eggNOG ortholog2880.D8LGK0
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.oleate hydratase activity
EggNOG OGs2S1KN@2759,COG4716@1
Ec32 ortholog descriptionDomain of unknown function DUF2236
Ec32 orthologEc-10_001750.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons9
Model size1113
Cds size1113
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816604.3853605-CDS-M-pyrifera_M_contig71:39581..397561622816604.3853605-CDS-M-pyrifera_M_contig71:39581..39756Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig71 39582..39756 -
1692278072.4088356-CDS-M-pyrifera_M_contig71:39581..397561692278072.4088356-CDS-M-pyrifera_M_contig71:39581..39756Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig71 39582..39756 -
1622816604.3961542-CDS-M-pyrifera_M_contig71:40538..406171622816604.3961542-CDS-M-pyrifera_M_contig71:40538..40617Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig71 40539..40617 -
1692278072.422618-CDS-M-pyrifera_M_contig71:40538..406171692278072.422618-CDS-M-pyrifera_M_contig71:40538..40617Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig71 40539..40617 -
1622816604.4125934-CDS-M-pyrifera_M_contig71:41178..413081622816604.4125934-CDS-M-pyrifera_M_contig71:41178..41308Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig71 41179..41308 -
1692278072.4337435-CDS-M-pyrifera_M_contig71:41178..413081692278072.4337435-CDS-M-pyrifera_M_contig71:41178..41308Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig71 41179..41308 -
1622816604.4247384-CDS-M-pyrifera_M_contig71:42416..425751622816604.4247384-CDS-M-pyrifera_M_contig71:42416..42575Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig71 42417..42575 -
1692278072.4501333-CDS-M-pyrifera_M_contig71:42416..425751692278072.4501333-CDS-M-pyrifera_M_contig71:42416..42575Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig71 42417..42575 -
1622816604.434759-CDS-M-pyrifera_M_contig71:43825..439671622816604.434759-CDS-M-pyrifera_M_contig71:43825..43967Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig71 43826..43967 -
1692278072.463677-CDS-M-pyrifera_M_contig71:43825..439671692278072.463677-CDS-M-pyrifera_M_contig71:43825..43967Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig71 43826..43967 -
1622816604.445693-CDS-M-pyrifera_M_contig71:44336..445191622816604.445693-CDS-M-pyrifera_M_contig71:44336..44519Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig71 44337..44519 -
1692278072.4769344-CDS-M-pyrifera_M_contig71:44336..445191692278072.4769344-CDS-M-pyrifera_M_contig71:44336..44519Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig71 44337..44519 -
1622816604.4577425-CDS-M-pyrifera_M_contig71:45558..456531622816604.4577425-CDS-M-pyrifera_M_contig71:45558..45653Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig71 45559..45653 -
1692278072.4874766-CDS-M-pyrifera_M_contig71:45558..456531692278072.4874766-CDS-M-pyrifera_M_contig71:45558..45653Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig71 45559..45653 -
1622816604.468741-CDS-M-pyrifera_M_contig71:46275..463691622816604.468741-CDS-M-pyrifera_M_contig71:46275..46369Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig71 46276..46369 -
1692278072.4987557-CDS-M-pyrifera_M_contig71:46275..463691692278072.4987557-CDS-M-pyrifera_M_contig71:46275..46369Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig71 46276..46369 -
1622816604.4815543-CDS-M-pyrifera_M_contig71:46732..467881622816604.4815543-CDS-M-pyrifera_M_contig71:46732..46788Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig71 46733..46788 -
1692278072.5137088-CDS-M-pyrifera_M_contig71:46732..467881692278072.5137088-CDS-M-pyrifera_M_contig71:46732..46788Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig71 46733..46788 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig71.16945.1prot_M-pyrifera_M_contig71.16945.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig71 39582..46788 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig71.16945.1

>prot_M-pyrifera_M_contig71.16945.1 ID=prot_M-pyrifera_M_contig71.16945.1|Name=mRNA_M-pyrifera_M_contig71.16945.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=371bp
GLALLTTYIGILQLLRFRRVRGLKFMDVKTDPSAVYRETAMLEFPFTVSK
ALEFAQFRAFGVPSISKLMHKTGEFCKRSGKRYDDTDLLFREFWENDTET
NRSKISIARINAIHGLYSKQISNSDMLYTLCLFITEPAAWIDRYEWRRCT
DIEKAGLLGHFALLGERMGIKGSRDWKTWDDALAFQLAYETEHFQYHESN
NALAVSTLDLFISNVPTAFQWAARWAVYALMDPFLLKTMGLPQVPNLLRW
AVTGGLLLRAMIVRFLLPPRPEFLVSRRTPFADDANITPQCCMKPRYEYY
TDPKLSCMTYKDGYRIGDLGTSACPAGRLMYDVPTFTGHGGGGRGGVAAG
AADEAPIASTGAAAVGEKYE*
back to top

mRNA from alignment at M-pyrifera_M_contig71:39582..46788-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig71.16945.1 ID=mRNA_M-pyrifera_M_contig71.16945.1|Name=mRNA_M-pyrifera_M_contig71.16945.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=7207bp|location=Sequence derived from alignment at M-pyrifera_M_contig71:39582..46788- (Macrocystis pyrifera P11B4 male)
GGGCTAGCCTTGCTGACCACCTATATTGGTATTTTACAGCTGCTACGCTT CCGGAGGTGAGGCAAACGTACCCACACCCATGCTTCATCGCCGAAAATGG GGGGGAGCCGGAACTGAGCTTGCCTCAGCCATAAATTGTTCCGTAAACCC CACGGCGGTTTTATTTTACACTACACGGTAGACCTAAGAGTGAGCTGCTT TCCAGTTGAGATCGGACGAAAGGGACGGTTTGTGGTGTGCCCCCTCTCCC GTCGTCGTCACCGCCACCGCCACTAGTACAGCTATTGCCGCTGAATGTTC AACCATTTTTGTTGCCACCGCCGACTCTATTGCCGCTATTGCCGCTTAAT AGTCATCAATTGTTCCTGCCACCACCGCCGCTACTGCCGCCTAATATTCC GCCATTATTGGTGTTACAGAGTTCGTGGATTAAAGTTTATGGACGTCAAG ACCGACCCTTCCGCGGTGTACAGGGAGACTGCCATGCTCGAATTTCCCTT CACAGTATCAAAGGTAACCCATGTTCGGCCAGAATATGAGTGCAGTACCG GGATGGGGGGGGGTGATGGGAGTCTTTCTCCACTTGTGGGTCGTAGTTAT ATGCGAGGAGCACGAAAACAAAGGGCCACACAACAATTCGGTTGCCCTCA AAACTTTTGATTCGAGCTTGACGTGTTTAGTGTTAGAGTTACTTTACTCC TATTGCTATTACGGAGGACCATAGAAAATAGGACCAAATATTGTTAGTAA AAATAGTTAAATATGTAGGTTTTTGTGTGTGCCGTAGGTCCTATTAACTA TGGACCCCCGTAATAACTCTATTTTATATTCCGAGGCGGGGAGGTGGACT CGGTGCCCGCTGACGACGATTGCGGGGGGGGATACTAACAGTGATCATAT CCCACTATGGACCATGGACCCGAAAAACATGTATCCCGCAACATGTACAC GCCATATTTTGTTCTGATTATGCTGGTGTTTCCCCGTAATAGCAGAGAAC TAATCACGCCCTTCGCGAGGAACAGCGCACAAAAAGAGACTAGCGGGGAG TTGCACCATGCCAAACACAACCTAACGACTTTATTATTTACCCCCCACCC CGCCTCTCTCTCTCTTCCCGCGCACACCCCGAAAGGCGCTGGAGTTCGCG CAGTTTCGCGCGTTTGGCGTCCCCTCCATCTCTAAGCTGATGCACAAGAC GGGCGAGTTTTGCAAGCGATCCGGCAAGAGGTGAGCTCTCTACGAGGGAG TAACGCTGTCGGATATTGCAGGGGCGTTATATTATTCCGGTAAGCAGTGC GGTGAGGGTTGTGTGGGGAGAAATCTCATCTGGCCAGGTGGAATTTGAAC GTCGTCCGTTCTGCTGATGCGGGGGGATAGGAGGGACGCAGCCCCCCTTT ATCCAGCTTAGCGGAATTGGGAGCCGTGCTGCCGTGGGGGTACGGGCACG TTTTAGCCCCTAAATGTTCTGGCTGACGAGGGGCTCCTCGACGTAAGAGC TAGCAAGCTACCACTCCTGTTGGAAAATATAAGGACGGTTTGTGTATTAA CACTAAATATAAACGGAACCTATGTTTCAGGACAAACTGGTACCCCATAT CGTTGGAACACAAATATTAATAGTAGTGTTGCTTCACATTTTTTTAATAG CCGTAGTACCTACTGTACGCCACGGCATTGCTCGTCGGCTTGACCCTTTT CCTGTAGTACTGCAGTCTCGTTTCGGGAACAAACCACCCAAACCATAAGC AGCTTGTCCCCAAAACGGGACTGCAGTCCTGAAAGGGTCAAGTTTTCACC GTAGTACACGTACATCCCGAAAATCAATTATTAATACTAGTGCCGGGAAC CATAGTAATCGTGACCCGTAGTACACACAAAATCCTACATGTTCTTGTTT TGTTACTGTTACGGGGGGCCATAGAAAATAGGACCAAATATTGTTAGTAA AAATAGGGAAACATAGAGGTTTTTGTGTGTACCGTAGATCTTATTTACCA TGGTCCCCCGGAATAAACATATTTGGTCCTGATTACTATTAATATGTTCC CCCGTGATAGTAGGTGAGGTATATGAGGTATAAAGCTCCTCAAGTGAGCC TGGGCCTCAGGAACAAATAGGTGCAACTCCGCCGTATACCACGCGCCCAA GCGAAAGGAGACCTGAACCCACCTCCCTGCACACGGGAGGTAATTCACCC GTTTTCCCGCACCTAACCCCGTCACCTCGACCCCCCCCCCCTCCCCCGCC TGCGCTCGTCTGGGCGTAGGTACGACGATACGGACCTTCTTTTCCGAGAA TTCTGGGAAAACGACACGGAAACGAACCGCAGCAAGATTTCCATCGCCCG GATAAACGCGATCCACGGCCTGTATTCTAAGCAAATCAGCAACTCCGATA TGCTCTACACGTTGTGCCTCTTCATCACGGAGCCCGCGGCCTGGATCGAT CGGTGAGTGTCGCGGTTTTACAACTCAAGCAATTGGGTGGATATATGATA TGTAGCGACAAAACGAAATCATGGAAATCACCGGGTAGGTCAGGGGTCTA CGTTGGGACCTCAGCTCTAGCAGAAGGAGCTGGAATAACACGGAGATTTG CGCCACATGGCCCCTCCAAGTAAATCTGACCATGGGAAATACTCTTACTT GTACTGATAGTGCTAACTTTGGGAGGCCGGGGGGAGGGCAGGGCCTAACA CCTACAATGGACGGTCCAGTTGCTGCTTCTGCTACTGCTGTAGTTGCTGC GTTTGCTTTCTGGTACGTTTGCTGCCATCAGCGTTGTGGTTGATAGCATC GATTGCTATATTTCGGAACAGGTACGAGTGGAGGCGCTGTACAGACATCG AGAAGGCAGGCCTGCTGGGCCACTTCGCGCTCCTGGGAGAGCGCATGGGC ATCAAGGGCAGTCGCGACTGGAAGACATGGGACGACGCTTTGGCTTTCCA GCTAGCGTACGAGGTGCGCGCGCAGCGAGTGTAGCGTAGACGGCGCCGGC AAATGCACGTTTCTTCACCGTCCTAGCCTCCGTTCTCGGTGTAGTCGCCC CCCGATGTGGCGAAATAGGAGGCCTAAATACACCCTAGAAACCCGTACGT ACACCACTTGTACACATACCCTCGATCGGGTAGCGTTCGTCGCCCTTCGC AGGGAAGTCTCGTTCATAGTTCAACCAGCACTGATTTGCAGTCCTAACGC TTTTAATCTGTCAAACTGAAGTGACGCGCTATCCCCTCCTCACGCGAACG TTTCAAGCAATAGCGAGGCGGCGGCTTCTTACCTAAAGGCATCATGTGTC CACGCACAGTGTGCCACGCGGGGTATATTCGAGAATATTCGAGAGGAAGG GGGGGGGGGGGGGGGGAGGGGCGTCGGTGAAATTGCCCGATATCAGTGTT TTGCTGTCTAGTTGAGTCGCGCGTGAAGCGGCGGATGTGTTCTCCGACGA CTACACGACCTTCGAATCATGTTCAGTAGGATGTGCTGAACGTTGGGTCC AGAGAGTTTCGCACATGTGCAATGTGTTCGTTGTTTGGTCCCGAGGGAGA GGTTCGAACATACATGTAGAACGTGTTCATTGCGCATGTTGAACACGTTG AATGTTGCTCAATATTCGATCGATCAAGAAAGGTCTGAATACGTAGAATG TGCTCATTGTTTAATGGAGAGAGGCTCGAGTCTGTGTAGAGTGTGCTCAG TGCTCAATGGTTTGGTCGAGAGAAGTTCAAACGCTTACAGTATAATGTGT TCGTTGAAGATGCTGAACATGATTAACGTCCAAAACGTGCTCATTGCTTG GGCAAAAAAAGGTCGAACATGTAGAATGTGCTCACTGTTTGGTAAAAATA AGTTCGAATATACACACAGACGTGCTCAATAGTCTGGTCGAGAAAGCGAT GCCCAGCGATGGAAAGAACAGCGAACAGAATACGTAGGTAGAGGACTGGG TCGGCTCCCCATGTCGTCTAGCACTCAGAAGCAGGCTGTCTTGTGTGGTA TCGTGTTGCGCCGAGTTGCGTTGTGTTGTGAGACGAAATGCAGATGTAGA AACGAAGAAAAATAAAACGAGGGGGTGTCCTTGCATCGTGCGCGCTATGC CGTTGACCCCGTATGGCCATGCCCCCCCCCCCCAACCCCCTCCCCTCCTC TCTCACTCTCGTTTTTCTCGGTGCCTCGGTGCGCGCAACACACCATGGAC TTGCCCCTCCCAGACGGAGCACTTTCAATACCACGAGAGCAACAACGCGT TAGCAGTCTCCACCCTCGACCTCTTCATTTCCAACGTGCCGACCGCATTC CAGTGGGCCGCACGGTGGGCCGTGTACGCGCTGATGGACCCGTTCCTCCT GAAGACGATGGGTCTGCCGCAGGTGAGAAACTTCGTTTACATCAACTCGG GAGGCTAGGAAAGAGTGGTAAAGGGGGGGGGGGGAGAGGAAGGAAAGGAC GATATGTCTTGGCGTATGTCCATTATTTTCGGACTGATGGTCAGGACAAA CTGTGCGTTCTCTTCCTTTGGATGGCGCGCTCTTTACGGCAAGCCGTCTA TTACTGTAGTGTCCCTTGCGTCAAGGTTCGAGGTTGTCAATCACAGTGTA TTACCAATCGTGCACGCGCTCTCGCCTCGTGTTTCGTACCGTCGTCGTAA CCGTCGCCGGAAGCAGCAATACAGGCGGGTGACATATACGTAAAACGCTA TATCCTTCCGCCCCACACCCTCTTCCGGCACATATCGCAATTTTTGCTCA ACCAAATGGAGTAAAACGATGGTATCTCGTTTAATGGGGACGCCGTGGAA CGTAATAACGTAGGTTGTCTCGCAAGAGACGTTCAGATGGACGAGCATCA TATCCTGTTGGGAGTGTTGATATCGTAGGCTGGCTCGGAAGGGACTTTGC TTATATGGATCACACCTAGCGACTGTGACGTACCGGTATACTTGTGTCAT TCATGAGAACAGAAGAGAGATAGATGTAGTGGCGAATATGTGGCCAAACT TCTCAAGAGAGCAGTGTTGGAGAGTTGAGAGAATGAGCTCGAGGGGCGCG TATCCCTGGCTCGATCACCTTGAGAGGTTGGATATTTTCCCCATGATATA CCCCTATAGTAAGACCCGTTTACCAGTACCCTACGAAATGCCTATTCAAA ATGACCTGTAGTTGTCAGTCCTGCCGACAATTCGCGGCTTGCCCTAGACA GGCCAAAGGACAATACACGCACGGGCGTCGGCGATTGCTGCGTATTCCAA CACTCCCCCTCGTTGCAGGATATTATGATCGAGGCAATTGCGCACGGCCT GTGGCAACAACGCCTTCAAGTTTGTAATCACCGGCACCATGTGAACGACT CTGTGACCCACAACAAACAGCGCGCGCACATGAGCGGCAGCAGTACCGTC GGTGGGCGGGCCCTGCTGTAACCATGAAGGCTCCCTCCCCCCACGTTCGT CTTGGTGTCCTTGATCGCAAACGGTTATAGGTGCCGAACCTGCTTAGATG GGCAGTGACGGGTGGCCTCCTCCTGCGCGCCATGATCGTGCGCTTTCTTC TTCCGCCCCGCCCAGAGTTTCTCGTGAGCCGCCGAACACCATTTGCAGAT GACGCCAACAGTGAGTACTTGCATATTAAATACAGACTCGATTAAGGTGC TGTTTGGGTTTCGTAGTCGAGTGAGAAGCAGGACGGGGAGGGGTACTGAA GGTCTCAGGAAGGAAAACTTCCTGCTGTGGCTAGTTATGACCGAATTATC CACACAGATCACTTTTTTTGGAATGTGTATGCGGTGTTGTTCGCGTAGCT GGTGGTTGTTTGTGCAAGCGGTGTCCTACTGTTGCCAGAGGGAATGGATC TGGGCAAAACCGGATTTGATTTCTCACGCTTGGCATGCCTCCACAACCGG GAGCACGGCTCAGCCTTCAATGCGGCGCCGGTGGACGCCCCTCTTCTCGT CTAGTAATCGCCTTAATCGTTTTAGGGCCTCGCAGATTTTTCGCCGTTAT TGGGTTCTTGTGTACGGGTGCTTCGCGCTTTGTAGCGCACCGTTCGCCCG TCCCGTGAACTCCCGAAGATGAGCAGAAGCACAACATGGTAACCCCACTC CGCCCCCTGCAAATCCGTCCTAAATCTATCGATTGGCGCCCTCTGTCCTC TTTTGCGACCTGCTCCACCAGTAACCCCGCAGTGTTGTATGAAACCTCGG TACGAGTACTACACCGACCCCAAGCTCAGCTGCATGACCTACAAAGACGG GTGAGTCACGCACGAATTCCAACTACTAGTGGTCGAAAATTTTCCCATTC CACCTCTCGCTCGATCGTCGGTTGCTGAGCCGGAGGAAATGTTTCTGGTC GGATCAGTGACCCTGGATCCCTGCGGTCGTTCCCTCTGAGAGACGCGTAG TGATTTGCGTACGGATTCATTCCAGGAGTATGCGGATGAAAATAATCCCC CTTTACCATCCCCGTCCCCCTTTGGGTTTTTCATGGGTGGTTGACACGAG AGGCTTGGCGACAGTTGCAGGAAGCCTGAGCCTCCAGGAGTGCTACCTGG GTCTACAATGCTTGATATAACTATTCGCGGCTATCTCCGTCAAAACGTAC GAGTAGGAAGCACTGCGGGTTTCCTTTGAAGCGACTAGTGTGGTGTTCAA GCAACTAATGTTGTATAGCTTTTACGCCTAATCGAGGGCATACATCTTGT CCGACCTCTGTCGATCATCTCCAGTAGTCGTTGCACGCGGAGTCGGCGCT CTCTTCTCCCTGTATTTGGTTACCACCATAGTCAAATCCACTTTATGATC GATCGCGGATTCGGCTTTCACCCGCACTCGCTCGCCTTGCCCTCTCTCCC ATTCGTTTCCTACTCAACACGCTTTTTGGTCGACAAGCCTCAGCTACATG CTCAACACGCTTGCTCAATACAGACCTCATGGAAATCAATTTCTAAAACA TTATGCACGCAACGCGATCTCTCTAAATTGACCGTATGGAAAAATCTGTG TACCACATGCGTGCGACATCATACACCGCCAGGTACAGGATCGGGGATCT AGGGACCTCGGCTTGCCCAGCCGGACGGCTCATGTACGATGTGCCTACCT TTACGGGCCACGGAGGTGGGGGCAGAGGGGGCGTTGCGGCAGGTGCTGCC GACGAGGCGCCGATTGCGTCGACGGGAGCTGCTGCCGTAGGGGAGAAGTA TGAATGA
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig71:39582..46788-

>mRNA_M-pyrifera_M_contig71.16945.1 ID=mRNA_M-pyrifera_M_contig71.16945.1|Name=mRNA_M-pyrifera_M_contig71.16945.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2226bp|location=Sequence derived from alignment at M-pyrifera_M_contig71:39582..46788- (Macrocystis pyrifera P11B4 male)
GGGCTAGCCTTGCTGACCACCTATATTGGTATTTTACAGCTGCTACGCTT
CCGGAGGGGCTAGCCTTGCTGACCACCTATATTGGTATTTTACAGCTGCT
ACGCTTCCGGAGAGTTCGTGGATTAAAGTTTATGGACGTCAAGACCGACC
CTTCCGCGGTGTACAGGGAGACTGCCATGCTCGAATTTCCCTTCACAGTA
TCAAAGAGTTCGTGGATTAAAGTTTATGGACGTCAAGACCGACCCTTCCG
CGGTGTACAGGGAGACTGCCATGCTCGAATTTCCCTTCACAGTATCAAAG
GCGCTGGAGTTCGCGCAGTTTCGCGCGTTTGGCGTCCCCTCCATCTCTAA
GCTGATGCACAAGACGGGCGAGTTTTGCAAGCGATCCGGCAAGAGGCGCT
GGAGTTCGCGCAGTTTCGCGCGTTTGGCGTCCCCTCCATCTCTAAGCTGA
TGCACAAGACGGGCGAGTTTTGCAAGCGATCCGGCAAGAGGTACGACGAT
ACGGACCTTCTTTTCCGAGAATTCTGGGAAAACGACACGGAAACGAACCG
CAGCAAGATTTCCATCGCCCGGATAAACGCGATCCACGGCCTGTATTCTA
AGCAAATCAGCAACTCCGATATGCTCTACACGTTGTGCCTCTTCATCACG
GAGCCCGCGGCCTGGATCGATCGGTACGACGATACGGACCTTCTTTTCCG
AGAATTCTGGGAAAACGACACGGAAACGAACCGCAGCAAGATTTCCATCG
CCCGGATAAACGCGATCCACGGCCTGTATTCTAAGCAAATCAGCAACTCC
GATATGCTCTACACGTTGTGCCTCTTCATCACGGAGCCCGCGGCCTGGAT
CGATCGGTACGAGTGGAGGCGCTGTACAGACATCGAGAAGGCAGGCCTGC
TGGGCCACTTCGCGCTCCTGGGAGAGCGCATGGGCATCAAGGGCAGTCGC
GACTGGAAGACATGGGACGACGCTTTGGCTTTCCAGCTAGCGTACGAGGT
ACGAGTGGAGGCGCTGTACAGACATCGAGAAGGCAGGCCTGCTGGGCCAC
TTCGCGCTCCTGGGAGAGCGCATGGGCATCAAGGGCAGTCGCGACTGGAA
GACATGGGACGACGCTTTGGCTTTCCAGCTAGCGTACGAGACGGAGCACT
TTCAATACCACGAGAGCAACAACGCGTTAGCAGTCTCCACCCTCGACCTC
TTCATTTCCAACGTGCCGACCGCATTCCAGTGGGCCGCACGGTGGGCCGT
GTACGCGCTGATGGACCCGTTCCTCCTGAAGACGATGGGTCTGCCGCAGA
CGGAGCACTTTCAATACCACGAGAGCAACAACGCGTTAGCAGTCTCCACC
CTCGACCTCTTCATTTCCAACGTGCCGACCGCATTCCAGTGGGCCGCACG
GTGGGCCGTGTACGCGCTGATGGACCCGTTCCTCCTGAAGACGATGGGTC
TGCCGCAGGTGCCGAACCTGCTTAGATGGGCAGTGACGGGTGGCCTCCTC
CTGCGCGCCATGATCGTGCGCTTTCTTCTTCCGCCCCGCCCAGAGTTTCT
CGTGAGCCGCCGAACACCATTTGCAGATGACGCCAACAGTGCCGAACCTG
CTTAGATGGGCAGTGACGGGTGGCCTCCTCCTGCGCGCCATGATCGTGCG
CTTTCTTCTTCCGCCCCGCCCAGAGTTTCTCGTGAGCCGCCGAACACCAT
TTGCAGATGACGCCAACATAACCCCGCAGTGTTGTATGAAACCTCGGTAC
GAGTACTACACCGACCCCAAGCTCAGCTGCATGACCTACAAAGACGGTAA
CCCCGCAGTGTTGTATGAAACCTCGGTACGAGTACTACACCGACCCCAAG
CTCAGCTGCATGACCTACAAAGACGGGTACAGGATCGGGGATCTAGGGAC
CTCGGCTTGCCCAGCCGGACGGCTCATGTACGATGTGCCTACCTTTACGG
GCCACGGAGGTGGGGGCAGAGGGGGCGTTGCGGCAGGTGCTGCCGACGAG
GCGCCGATTGCGTCGACGGGAGCTGCTGCCGTAGGGGAGAAGTATGAATG
AGTACAGGATCGGGGATCTAGGGACCTCGGCTTGCCCAGCCGGACGGCTC
ATGTACGATGTGCCTACCTTTACGGGCCACGGAGGTGGGGGCAGAGGGGG
CGTTGCGGCAGGTGCTGCCGACGAGGCGCCGATTGCGTCGACGGGAGCTG
CTGCCGTAGGGGAGAAGTATGAATGA
back to top