mRNA_M-pyrifera_M_contig7097.16939.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig7097.16939.1 vs. uniprot
Match: D8LBD9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBD9_ECTSI) HSP 1 Score: 256 bits (654), Expect = 2.690e-83 Identity = 135/164 (82.32%), Postives = 149/164 (90.85%), Query Frame = 1
Query: 1 MSRGSAFRSTGESKRQARVSQLVTGELAKILRQGHGIKTKDRIDDDVRCKIAVVDVDMSPDLRTAKVFISVYGDVMEKREAYAWCVKNTKPIRMALATELKGMKRVPELFFRDTDIGAAVDLMALIDRVSDSDEASAAAARESSGNDEIEGFEGLTEEDFFTFD 492
M+RGS FRST ESKRQARVSQL+TGELAKILR GHGIKTKD+IDDDVRC+IAVVDVDMSPDLR+AKVFISVYGDV+EKREAYAWCVKNTK IRMAL ELKGMKRVPELFF+DTDI AAVDLMALIDRVS ++ + AA R+ G +EIEGFEG+TE+DFFTFD
Sbjct: 73 MARGSTFRSTTESKRQARVSQLLTGELAKILRLGHGIKTKDKIDDDVRCRIAVVDVDMSPDLRSAKVFISVYGDVLEKREAYAWCVKNTKAIRMALCAELKGMKRVPELFFKDTDISAAVDLMALIDRVSGDEDGNEAALRDD-GEEEIEGFEGVTEDDFFTFD 235
BLAST of mRNA_M-pyrifera_M_contig7097.16939.1 vs. uniprot
Match: A0A835ZHE8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHE8_9STRA) HSP 1 Score: 149 bits (377), Expect = 7.910e-42 Identity = 77/130 (59.23%), Postives = 100/130 (76.92%), Query Frame = 1
Query: 1 MSRGSAFRSTG-ESKRQARVSQLVTGELAKILRQGHGIKTKDRIDDDVRCKIAVVDVDMSPDLRTAKVFISVYGDVMEKREAYAWCVKNTKPIRMALATELKGMKRVPELFFRDTDIGAAVDLMALIDRV 387
M R + F++ ESKRQAR+SQL+T ELA I+R GH +K + D++R KI++VDV++SPDLR A++F+SVYGD +EKREAY WCV+NT IR AL+ LK MK VPEL F+ TDIGAAVD+M LI +V
Sbjct: 56 MGRANRFKAARPESKRQARISQLLTAELASIIRLGHHVKGSKALSDELRSKISIVDVNVSPDLRNARIFVSVYGDRLEKREAYGWCVRNTGGIRFALSQRLKDMKGVPELTFQQTDIGAAVDVMHLIGKV 185
BLAST of mRNA_M-pyrifera_M_contig7097.16939.1 vs. uniprot
Match: A0A7S2DN30_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DN30_9STRA) HSP 1 Score: 133 bits (334), Expect = 5.050e-35 Identity = 67/129 (51.94%), Postives = 95/129 (73.64%), Query Frame = 1
Query: 1 MSRGSAFRSTGESKRQARVSQLVTGELAKILRQGHGIKTKDRIDDDVRCKIAVVDVDMSPDLRTAKVFISVYGDVMEKREAYAWCVKNTKPIRMALATELKGMKRVPELFFRDTDIGAAVDLMALIDRV 387
MSRG+A ESKRQ RVSQ++ E+ ILR+G K I D +R KI++VDV MSPDLRTAKV++SV+GD++++R+AY+W V N+K I+ +LA L MK VP+L+F++TD+ AAVD+M I+ +
Sbjct: 45 MSRGNAVSKGRESKRQGRVSQVIRSEIVTILRRGSMKYMKKDIGDTLRQKISIVDVHMSPDLRTAKVYVSVFGDIVDRRQAYSWLVMNSKAIKHSLAQSLSAMKTVPDLYFKETDLAAAVDVMTTIESI 173
BLAST of mRNA_M-pyrifera_M_contig7097.16939.1 vs. uniprot
Match: A0A7S1U3D0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U3D0_9STRA) HSP 1 Score: 121 bits (303), Expect = 4.990e-31 Identity = 58/124 (46.77%), Postives = 88/124 (70.97%), Query Frame = 1
Query: 10 GSAFRSTGESKRQARVSQLVTGELAKILRQGHGIKTKDRIDDDVRCKIAVVDVDMSPDLRTAKVFISVYGDVMEKREAYAWCVKNTKPIRMALATELKGMKRVPELFFRDTDIGAAVDLMALID 381
GS R ES+RQ+R++QLV E++ IL GHG+++ ID ++R I++VDVD+SPDLR +++SV GD KREA+AW V++T+ +R LA +G+KR+PE+ F+ D+ AAVD+ LI+
Sbjct: 33 GSLVRRRDESRRQSRIAQLVKAEVSAILLTGHGVRSPRDIDGELRKAISIVDVDVSPDLRNCNIYVSVRGDGAGKREAFAWLVRSTRALRHVLAQRNRGLKRIPEILFKQADVSAAVDVFRLIE 156
BLAST of mRNA_M-pyrifera_M_contig7097.16939.1 vs. uniprot
Match: A0A7R9W0U4_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W0U4_9STRA) HSP 1 Score: 115 bits (288), Expect = 1.700e-28 Identity = 64/131 (48.85%), Postives = 90/131 (68.70%), Query Frame = 1
Query: 13 SAFRSTGESKRQARVSQLVTGELAKILRQGHGIKTKDRIDDDVRCKIAVVDVDMSPDLRTAKVFISVYG----DVMEKREAYAWCVKNTKPIRMALATELKGMKRVPELFFRDTDIGAAVDLMALIDRVSD 393
S + ++ SKRQ RV +V ELA+I++ G IK D IDD++R +I VV+ D+SPDLR A+V +S+ G ++KR AY+W V++TK IR A+A LK MK P+L F D+GAAVD+M LI++VSD
Sbjct: 47 SRYAASDRSKRQERVGHVVRSELARIIQAGFPIKNVDPIDDELRRRINVVNADVSPDLRHARVTVSIIGRGETSTVDKRRAYSWLVRSTKMIRHAMAQRLKHMKVCPDLKFVQADVGAAVDVMRLIEKVSD 177
BLAST of mRNA_M-pyrifera_M_contig7097.16939.1 vs. uniprot
Match: A0A7S2SUM5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUM5_9STRA) HSP 1 Score: 113 bits (282), Expect = 1.070e-27 Identity = 64/129 (49.61%), Postives = 85/129 (65.89%), Query Frame = 1
Query: 7 RGSAFRSTGESKRQARVSQLVTGELAKILRQGHGIKTKDRIDDDVRCKIAVVDVDMSPDLRTAKVFISVYGDVMEKREAYAWCVKNTKPIRMALATELKGMKRVPELFFRDTDIGAAVDLMALIDRVSD 393
RG ESKRQARV+QLV EL++++RQG TK I + R KI++VDV MSPDLR AKVF+SV+ E R+AYAW V+++ R L+ EL+ M+ VP L FR D+ AVD+M ID ++D
Sbjct: 57 RGPGVGRRDESKRQARVAQLVRAELSQVIRQGTRANTKG-ITEATRQKISIVDVHMSPDLRNAKVFVSVFASGPESRQAYAWLVQSSGAFRHELSQELRHMRSVPALTFRRADVAEAVDVMVAIDNLND 184
BLAST of mRNA_M-pyrifera_M_contig7097.16939.1 vs. uniprot
Match: A0A1Z5KIK3_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KIK3_FISSO) HSP 1 Score: 107 bits (266), Expect = 7.580e-26 Identity = 63/124 (50.81%), Postives = 81/124 (65.32%), Query Frame = 1
Query: 37 SKRQARVSQLVTGELAKILRQGHGIKTKDRIDDDVRCKIAVVDVDMSPDLRTAKVFISVYGDV------MEKREAYAWCVKNTKPIRMALATELKGMKRVPELFFRDTDIGAAVDLMALIDRVS 390
SKRQ RV QLV EL KIL QG + + +D D+R +I+VV D+SPDLR A++ ISV + M+KR AYAW V N KP+R AL+ +L MK PEL F D+ AAVD+M LID++S
Sbjct: 11 SKRQERVGQLVRTELGKILHQGSASRAE-FLDADLRQRISVVKADVSPDLRQARISISVSASLAREDTAMDKRRAYAWLVNNAKPLRHALSQKLSHMKSCPELKFVQVDVAAAVDVMYLIDKIS 133
BLAST of mRNA_M-pyrifera_M_contig7097.16939.1 vs. uniprot
Match: A0A7S2NYX9_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NYX9_9STRA) HSP 1 Score: 106 bits (265), Expect = 6.090e-25 Identity = 62/131 (47.33%), Postives = 83/131 (63.36%), Query Frame = 1
Query: 34 ESKRQARVSQLVTGELAKILRQGHGIKTKD-RIDDDVRCKIAVVDVDMSPDLRTAKVFISVYGD------------VMEKREAYAWCVKNTKPIRMALATELKGMKRVPELFFRDTDIGAAVDLMALIDRV 387
+SKRQ RV QLV E+A I++ GH IK D +D D+R +I+VV+ D+SPDLR A++ +SV V+EKR AY+W VK+TK IR ALA L MK +P L F D+GAAVD+M I+ +
Sbjct: 66 KSKRQFRVGQLVRSEIASIIKLGHEIKHTDGSLDSDLRLRISVVNADVSPDLRQARITVSVISKPNTDETAKLSDTVVEKRVAYSWLVKHTKNIRHALAQRLSHMKTIPNLTFAQADVGAAVDVMNKINNI 196
BLAST of mRNA_M-pyrifera_M_contig7097.16939.1 vs. uniprot
Match: A0A7S2UPV8_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UPV8_9STRA) HSP 1 Score: 103 bits (257), Expect = 7.280e-24 Identity = 60/133 (45.11%), Postives = 85/133 (63.91%), Query Frame = 1
Query: 13 SAFRSTGESKRQARVSQLVTGELAKILRQGHGIKTKDRIDDDVRCKIAVVDVDMSPDLRTAKVFISVYGD--------VMEKREAYAWCVKNTKPIRMALATELKGMKRVPELFFRDTDIGAAVDLMALIDRV 387
S + S SKRQ RV LV E++ IL H IK D ++ ++R +I+VV+VD+SPDL A++ +S+ G V+++R AY+W V++TK IR ALA L MK VP L F D+GAAVD+M LI++V
Sbjct: 55 SRYGSQDRSKRQERVGHLVRAEISSILTLSHEIKHSDYLEGELRKRISVVNVDVSPDLAQARITVSLVGGNHDTKEDAVVDQRRAYSWLVRSTKMIRHALAQRLSHMKGVPNLTFVLADVGAAVDVMQLIEKV 187
BLAST of mRNA_M-pyrifera_M_contig7097.16939.1 vs. uniprot
Match: B7FY13_PHATC (Chitinase glycoside hydrolase family 18, ribosome-binding factor n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FY13_PHATC) HSP 1 Score: 100 bits (249), Expect = 1.080e-22 Identity = 62/135 (45.93%), Postives = 83/135 (61.48%), Query Frame = 1
Query: 22 RSTGESKRQARVSQLVTGELAKILRQGHGIKTKDR--IDDDVRCKIAVVDVDMSPDLRTAKVFISV----------YGDVMEKREAYAWCVKNTKPIRMALATELKGMKRVPELFFRDTDIGAAVDLMALIDRVS 390
++T SKRQ RV LV E++ IL G IK +D +D ++R +I+VV D+SPDLR A++ +SV Y ++KR AYAW V+NTKPIR LA + MK P L F D+ AAVD+M LID+VS
Sbjct: 64 KNTERSKRQERVGHLVRTEISNIL-HGGVIKGQDAEYLDAELRQRISVVSADISPDLRQARISVSVRAPPRNDQAEYNPAVDKRRAYAWLVRNTKPIRHTLAQRMSHMKSCPNLSFVQVDVAAAVDVMYLIDKVS 197 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7097.16939.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig7097.16939.1 >prot_M-pyrifera_M_contig7097.16939.1 ID=prot_M-pyrifera_M_contig7097.16939.1|Name=mRNA_M-pyrifera_M_contig7097.16939.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=190bp MSRGSAFRSTGESKRQARVSQLVTGELAKILRQGHGIKTKDRIDDDVRCKback to top mRNA from alignment at M-pyrifera_M_contig7097:11308..11877- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig7097.16939.1 ID=mRNA_M-pyrifera_M_contig7097.16939.1|Name=mRNA_M-pyrifera_M_contig7097.16939.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=570bp|location=Sequence derived from alignment at M-pyrifera_M_contig7097:11308..11877- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig7097:11308..11877- >mRNA_M-pyrifera_M_contig7097.16939.1 ID=mRNA_M-pyrifera_M_contig7097.16939.1|Name=mRNA_M-pyrifera_M_contig7097.16939.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1140bp|location=Sequence derived from alignment at M-pyrifera_M_contig7097:11308..11877- (Macrocystis pyrifera P11B4 male)back to top |