mRNA_M-pyrifera_M_contig70736.16884.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig70736.16884.1
Unique NamemRNA_M-pyrifera_M_contig70736.16884.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig70736.16884.1 vs. uniprot
Match: A0A814ZQJ5_9BILA (Hypothetical protein n=5 Tax=Rotaria TaxID=231623 RepID=A0A814ZQJ5_9BILA)

HSP 1 Score: 241 bits (615), Expect = 5.210e-76
Identity = 125/250 (50.00%), Postives = 165/250 (66.00%), Query Frame = 1
Query:   10 AVDQRGSQKFA-----SGEETNVDAEYYDNVFTQRVNLWMTHEGVRELWESAGMVFGRFLTCLEFGLEGKGDGMAIWHDQALIKEPWANPTSPHVDNVYWSFSSPHAGSLWVALDDATLQNGCLHFAPGTHKLLRWGEDAGEDAYLEVKIGKNMGDMFS-HPSLVASPTPVTMRPYEMRAGSLSFHNGLTVHAAGPNFTPYRRRAMTLQMMPLNAKFNGIQNILPDHRFKSLTLNSPLLPHDD-NPILFK 738
            AV+ R   K+        + TNVD EYY+NVFTQR+NLW TH  V++L   +G+V G+    LE G+    D + IWHDQALIKEP+ANPT+ H+D  YWSF+S HA S+W+ALDDATL+NGC++F PG+HK+      A  + + E+KIGKN+ D+F+ +P L  SPT        M+AGS SFH+G  +H AG N TP RR AMT+QMMP N  FNG QN++ D R K L +   +   D+ NPIL+K
Sbjct:   58 AVNDRADAKYKFPTANQDDSTNVDFEYYNNVFTQRINLWQTHNSVKQLLLESGLVIGKIAAELE-GI----DCVRIWHDQALIKEPFANPTAWHLDVSYWSFTSLHAISVWIALDDATLENGCMYFMPGSHKVTEGRYSAANNEFAEIKIGKNLSDIFTTYPELKQSPTVAV----PMKAGSASFHSGHLIHGAGANMTPSRRAAMTIQMMPDNMTFNGKQNVITDERMKELKIGVSVFNDDNFNPILYK 298          
BLAST of mRNA_M-pyrifera_M_contig70736.16884.1 vs. uniprot
Match: A0A818VB42_9BILA (Hypothetical protein n=4 Tax=Rotaria sordida TaxID=392033 RepID=A0A818VB42_9BILA)

HSP 1 Score: 236 bits (602), Expect = 4.520e-74
Identity = 129/251 (51.39%), Postives = 164/251 (65.34%), Query Frame = 1
Query:   10 AVDQRGSQKF---ASGEE--TNVDAEYYDNVFTQRVNLWMTHEGVRELWESAGMVFGRFLTCLEFGLEGKGDGMAIWHDQALIKEPWANPTSPHVDNVYWSFSSPHAGSLWVALDDATLQNGCLHFAPGTHKLLRWGEDAGEDAYLEVKIGKNMGDMF-SHPSLVASPTPVTMRPYEMRAGSLSFHNGLTVHAAGPNFTPYRRRAMTLQMMPLNAKFNGIQNILPDHRFKSLTLNSPLLPHDD-NPILFKR 741
            AV  R  +K+   A  EE  TNVD +YYDNVFTQR+NLW TH  V+EL   +G V G+    LE G+    D + IWHDQALIKEP+ANPT+ H D  YWSF+S HA S+W+ALDDATL+NGC++F PG+HK++     A  + + E+KIGKNM D+F + P L   PT        M+AGS SFH+ L +H AGPN TP RR AMT+QMMP N  FNG QNIL   +   L +   +   D+ NPIL+K+
Sbjct:   56 AVKDRAERKYKLPAPDEEDHTNVDFDYYDNVFTQRINLWQTHNSVKELLLESGSVIGKIAAELE-GI----DCVRIWHDQALIKEPFANPTAWHFDVTYWSFTSLHAISVWIALDDATLENGCMYFMPGSHKVIERHYYASNNTFPEIKIGKNMSDIFGTFPELKQWPTVAV----PMKAGSASFHSALLIHGAGPNMTPGRRPAMTIQMMPDNMIFNGKQNILTKEQMDKLQIGVSVFNDDNCNPILYKK 297          
BLAST of mRNA_M-pyrifera_M_contig70736.16884.1 vs. uniprot
Match: A0A819D5E1_9BILA (Hypothetical protein n=4 Tax=Rotaria sordida TaxID=392033 RepID=A0A819D5E1_9BILA)

HSP 1 Score: 229 bits (585), Expect = 1.780e-71
Identity = 126/251 (50.20%), Postives = 165/251 (65.74%), Query Frame = 1
Query:   10 AVDQRGSQK--FASGEE---TNVDAEYYDNVFTQRVNLWMTHEGVRELWESAGMVFGRFLTCLEFGLEGKGDGMAIWHDQALIKEPWANPTSPHVDNVYWSFSSPHAGSLWVALDDATLQNGCLHFAPGTHKLLRWGEDAGEDAYLEVKIGKNMGDMFS-HPSLVASPTPVTMRPYEMRAGSLSFHNGLTVHAAGPNFTPYRRRAMTLQMMPLNAKFNGIQNILPDHRFKSLTLNSPLLPHDD-NPILFKR 741
            AV+ R  +K  FA+  E   TN+D +YYDNVFTQRVNLW TH  V+EL   +G V G+    LE G+    D + IWHDQALIKE +ANPT+ H+D  YWSF+S HA S+W+ALDDATL+NGC++F PG+HK+ +    A  + + E+KIGKN+ D+F+ +P L    T        M+AGS SFH+GL VH AG N TP RR AMT+QMMP N  FNG QNIL   +   L ++  +   D+ NP L+K+
Sbjct:   58 AVNDRAEKKYKFATRNEEDHTNIDFDYYDNVFTQRVNLWQTHNSVKELLLESGRVIGKIAAELE-GI----DCVRIWHDQALIKESFANPTAWHLDIPYWSFTSLHAISVWIALDDATLENGCMYFMPGSHKVTKRRYYAENNTFTEIKIGKNLSDIFNAYPELKTWQTVAV----PMKAGSASFHSGLLVHGAGANMTPGRRAAMTIQMMPDNMTFNGKQNILTKKQMNKLKIDVSVFNDDNLNPTLYKK 299          
BLAST of mRNA_M-pyrifera_M_contig70736.16884.1 vs. uniprot
Match: A0A818WGT2_9BILA (Hypothetical protein n=17 Tax=Rotaria TaxID=231623 RepID=A0A818WGT2_9BILA)

HSP 1 Score: 228 bits (580), Expect = 2.280e-70
Identity = 124/251 (49.40%), Postives = 159/251 (63.35%), Query Frame = 1
Query:   10 AVDQRGSQKFA-----SGEETNVDAEYYDNVFTQRVNLWMTHEGVRELWESAGMVFGRFLTCLEFGLEGKGDGMAIWHDQALIKEPWANPTSPHVDNVYWSFSSPHAGSLWVALDDATLQNGCLHFAPGTHKLLRWGEDAGEDAYLEVKIGKNMGDMFS-HPSLVASPTPVTMRPYEMRAGSLSFHNGLTVHAAGPNFTPYRRRAMTLQMMPLNAKFNGIQNILPDHRFKSLTLNSPLLPHDD-NPILFKR 741
            AV  R  +K+        + TNVD +YYDNVFTQR+NLW TH  V+EL   +G V G+    LE G+    D   IW DQALIKEP+ANPTS H D  YWSF+S HA S+W+ALDD+TL+NGC++F PG+HK++        + + E+KIGKNM D+F+ +P L   PT        M+AGS SFH+GL VH A  N TP RR AMT+QMMP N  FNG QNIL   +   L +   +   D+ NPIL+K+
Sbjct:   84 AVKDRAERKYKLPTVNEEDHTNVDFDYYDNVFTQRINLWQTHNSVKELLLQSGNVIGKIAAELE-GI----DCARIWCDQALIKEPFANPTSWHFDVTYWSFTSLHAISVWIALDDSTLENGCMYFMPGSHKVVERRYYESNNTFPEIKIGKNMADIFAIYPELKQMPTVAV----PMKAGSASFHSGLLVHGANANMTPGRRPAMTIQMMPDNMVFNGKQNILTKEQMNKLEIGVSVFNDDNCNPILYKK 325          
BLAST of mRNA_M-pyrifera_M_contig70736.16884.1 vs. uniprot
Match: A0A815BQT2_9BILA (Hypothetical protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A815BQT2_9BILA)

HSP 1 Score: 226 bits (575), Expect = 3.210e-70
Identity = 121/251 (48.21%), Postives = 158/251 (62.95%), Query Frame = 1
Query:   10 AVDQRGSQKFA-----SGEETNVDAEYYDNVFTQRVNLWMTHEGVRELWESAGMVFGRFLTCLEFGLEGKGDGMAIWHDQALIKEPWANPTSPHVDNVYWSFSSPHAGSLWVALDDATLQNGCLHFAPGTHKLLRWGEDAGEDAYLEVKIGKNMGD-MFSHPSLVASPTPVTMRPYEMRAGSLSFHNGLTVHAAGPNFTPYRRRAMTLQMMPLNAKFNGIQNILPDHRFKSLTLNSPLLPHDD-NPILFKR 741
            AV  R  +K+        + TN D +YYDNVFTQRVNLW THE V++L   +G V G+    LE       D + IWHDQALIKEP+ANPT+ H+D  YWSF+S HA S+W+ALDDATL+NGC++F PG+HK+      A  + + E+KIGKN+ D + ++P L   PT        M+AGS SFH+G  +H AG N T  RR AMT+QMMP N  FNG QNIL   +   L +   +   D+ NPIL+K+
Sbjct:   38 AVHDRAEKKYKFPTVNEDDHTNTDLDYYDNVFTQRVNLWQTHESVKQLLLESGSVIGKIAAELE-----NIDCIRIWHDQALIKEPFANPTAWHLDIPYWSFTSLHAISVWIALDDATLENGCMYFMPGSHKVTERRYYASNNTFTEIKIGKNLSDILITYPELKQWPTIAV----PMKAGSASFHSGHLIHGAGANMTSGRRAAMTIQMMPDNMIFNGKQNILTKKQMTELKVGVSVFNDDNINPILYKK 279          
BLAST of mRNA_M-pyrifera_M_contig70736.16884.1 vs. uniprot
Match: A0A2D8UDG0_9BACT (Phytanoyl-CoA dioxygenase n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A2D8UDG0_9BACT)

HSP 1 Score: 223 bits (568), Expect = 2.300e-69
Identity = 120/247 (48.58%), Postives = 156/247 (63.16%), Query Frame = 1
Query:    1 VDDAVDQRGSQKFASGEETNVDAEYYDNVFTQRVNLWMTHEGVRELWESAGMVFGRFLTCLEFGLEGKGDGMAIWHDQALIKEPWANPTSPHVDNVYWSFSSPHAGSLWVALDDATLQNGCLHFAPGTHKLLRWGEDAGEDAYLEVKIGKNMGDMFS-HPSLVASPTPVTMRPYEMRAGSLSFHNGLTVHAAGPNFTPYRRRAMTLQMMPLNAKFNGIQNILPDHRFKSLTLNSPLLPHDDNPILFK 738
            VDDA++QR  +K A G   + D+ +YD VFTQR+NLW  H G+REL      +  + +  +   L G  DG+ +WHDQALIKEPWANPT+ H+DN YWSFSS +A S+W+ALDDATL NGCL+F PGTH          E  +    I + M D+F  +P  V +  P+   P  MRAG  SFHNGLT H AG N TPYRRRAMT   MP  + FNG +N+LPD   ++L++   L   D NP+++K
Sbjct:   37 VDDAIEQRQDRKLADGSMRSGDS-FYDRVFTQRINLWEDHSGMREL------ILDKRIGKIAADLAGV-DGIRVWHDQALIKEPWANPTAWHLDNPYWSFSSKNAISIWIALDDATLSNGCLYFLPGTHD---------EATFENSGITQEMADLFKVYPEWV-NRDPL---PGPMRAGDCSFHNGLTAHGAGANMTPYRRRAMTCAFMPDGSTFNGQKNVLPDSYIETLSIGQVLRNDDLNPLIYK 262          
BLAST of mRNA_M-pyrifera_M_contig70736.16884.1 vs. uniprot
Match: A0A814Q6M7_9BILA (Hypothetical protein n=3 Tax=Rotaria sordida TaxID=392033 RepID=A0A814Q6M7_9BILA)

HSP 1 Score: 222 bits (566), Expect = 1.830e-68
Identity = 121/251 (48.21%), Postives = 160/251 (63.75%), Query Frame = 1
Query:   10 AVDQRGSQKFASG-----EETNVDAEYYDNVFTQRVNLWMTHEGVRELWESAGMVFGRFLTCLEFGLEGKGDGMAIWHDQALIKEPWANPTSPHVDNVYWSFSSPHAGSLWVALDDATLQNGCLHFAPGTHKLLRWGEDAGEDAYLEVKIGKNMGDMF-SHPSLVASPTPVTMRPYEMRAGSLSFHNGLTVHAAGPNFTPYRRRAMTLQMMPLNAKFNGIQNILPDHRFKSLTLNSPLLPHDD-NPILFKR 741
            AV  R  +K+        + TN+D +YYDNVFTQRV+LW TH  V+EL   +G V G+    LE G+    D + IW DQALIKEP+ANPT+ H+D  YWSF+S HA S+W+ALDDATL+NGC++F PG+HK+      A  + + E+KIGKN+ D+F ++P L    T        M+AGS SFH+G  +H AG N TP RR AMT+QMMP N  FNG QNIL   +   L +   +   D+ NPIL+K+
Sbjct:   68 AVKDRAEKKYKFSTVNEEDHTNIDFDYYDNVFTQRVSLWQTHNSVKELLLESGGVIGKIAAELE-GI----DCVRIWCDQALIKEPFANPTAWHLDIPYWSFTSLHAISVWIALDDATLENGCMYFMPGSHKVTERRYYAANNVFTEIKIGKNLSDVFITYPELKQWQTVAV----PMKAGSASFHSGHLIHGAGANMTPGRRAAMTIQMMPDNMVFNGKQNILTKKQMNELQIGVSVFNDDNLNPILYKK 309          
BLAST of mRNA_M-pyrifera_M_contig70736.16884.1 vs. uniprot
Match: A0A815BCC2_ADIRI (Hypothetical protein n=3 Tax=Adineta ricciae TaxID=249248 RepID=A0A815BCC2_ADIRI)

HSP 1 Score: 221 bits (563), Expect = 3.720e-68
Identity = 119/251 (47.41%), Postives = 157/251 (62.55%), Query Frame = 1
Query:   10 AVDQRGSQKFASG-----EETNVDAEYYDNVFTQRVNLWMTHEGVRELWESAGMVFGRFLTCLEFGLEGKGDGMAIWHDQALIKEPWANPTSPHVDNVYWSFSSPHAGSLWVALDDATLQNGCLHFAPGTHKLLRWGEDAGEDAYLEVKIGKNMGDMFS-HPSLVASPTPVTMRPYEMRAGSLSFHNGLTVHAAGPNFTPYRRRAMTLQMMPLNAKFNGIQNILPDHRFKSLTLNSPLLPHDD-NPILFKR 741
            AV  R  +K+        + TNVD +YYDNVFTQRVNLW TH  V+EL   +G V G+    LE G+    D + IWHDQALIKE + NPT+ H+D  YWSF+S HA S+W+ALDDAT++NGC++F PG+HK+         + + E+KI KN+ D+F  +P L   PT     P  M+AGS SFH G  +H AG N TP RR AMT+QMMP N  FNG QNIL   +   L +   +   D+ NP+L+++
Sbjct:   58 AVQDRAEKKYKFATVLEEDHTNVDLDYYDNVFTQRVNLWQTHPSVKELLLESGSVIGKIAAELE-GV----DCIRIWHDQALIKESFGNPTAWHLDVPYWSFNSLHAISVWIALDDATVENGCMYFMPGSHKVTERHFHESNETFPEIKISKNLSDIFMVYPELKKYPTI----PVPMKAGSASFHCGHLIHGAGANMTPGRRAAMTIQMMPDNMVFNGKQNILTKEQMDELEVGVSVFNDDERNPVLYRK 299          
BLAST of mRNA_M-pyrifera_M_contig70736.16884.1 vs. uniprot
Match: A0A814L7G8_9BILA (Hypothetical protein n=3 Tax=Rotaria sordida TaxID=392033 RepID=A0A814L7G8_9BILA)

HSP 1 Score: 224 bits (572), Expect = 4.920e-68
Identity = 122/251 (48.61%), Postives = 161/251 (64.14%), Query Frame = 1
Query:   10 AVDQRGSQKFASG-----EETNVDAEYYDNVFTQRVNLWMTHEGVRELWESAGMVFGRFLTCLEFGLEGKGDGMAIWHDQALIKEPWANPTSPHVDNVYWSFSSPHAGSLWVALDDATLQNGCLHFAPGTHKLLRWGEDAGEDAYLEVKIGKNMGDMFS-HPSLVASPTPVTMRPYEMRAGSLSFHNGLTVHAAGPNFTPYRRRAMTLQMMPLNAKFNGIQNILPDHRFKSLTLNSPLLPHDD-NPILFKR 741
            AV  R  +K+        + TN+D +YYDNVFTQRV+LW TH  V+EL   +G V G+    LE G+    D + IW DQALIKEP+ANPT+ H+D  YWSF+S HA S+W+ALDDATL+NGC++F PG+HK+      A  + + E+KIGKN+ D+F+ +P L    T        M+AGS SFH+GL +H AG N TP RR AMT+QMMP N  FNG QNIL   +   L +   +   D+ NPIL+K+
Sbjct:   68 AVKDRAEKKYKFSTVNEEDHTNIDFDYYDNVFTQRVSLWQTHNSVKELLLESGGVIGKIAAELE-GI----DCVRIWCDQALIKEPFANPTAWHLDIPYWSFTSLHAISVWIALDDATLENGCMYFMPGSHKVTERRYYAENNTFTEIKIGKNLSDIFNAYPELKTWQTVAV----PMKAGSASFHSGLLIHGAGANMTPGRRAAMTIQMMPDNMVFNGKQNILTKKQMNELQIGVSVFNDDNLNPILYKK 309          
BLAST of mRNA_M-pyrifera_M_contig70736.16884.1 vs. uniprot
Match: A0A813X960_9BILA (Hypothetical protein n=8 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A813X960_9BILA)

HSP 1 Score: 219 bits (559), Expect = 1.540e-67
Identity = 114/230 (49.57%), Postives = 151/230 (65.65%), Query Frame = 1
Query:   55 TNVDAEYYDNVFTQRVNLWMTHEGVRELWESAGMVFGRFLTCLEFGLEGKGDGMAIWHDQALIKEPWANPTSPHVDNVYWSFSSPHAGSLWVALDDATLQNGCLHFAPGTHKLLRWGEDAGEDAYLEVKIGKNMGDMFS-HPSLVASPTPVTMRPYEMRAGSLSFHNGLTVHAAGPNFTPYRRRAMTLQMMPLNAKFNGIQNILPDHRFKSLTLNSPLLPHDD-NPILFK 738
            TN+D +YYDNVFTQ VNLW TH+ V+++   +G V G+    LE G+    D + IWHDQALIKEP+ANPT+ H+D  YWSF+S HA S+W+ALDDATL+NGC++F PG+HK+         + + E+KIGKN+ D+F+ +  L   PT        M+AGS SFH+GL +H AG N T  RR AM +QMMP N  FNG QNIL   +   L +   +   D+ NPIL+K
Sbjct:   78 TNIDFDYYDNVFTQSVNLWQTHDSVKQILLESGEVIGKIAAELE-GI----DCVRIWHDQALIKEPFANPTAWHLDVPYWSFTSLHAISVWIALDDATLENGCMYFMPGSHKVTERHYYVANNTFPEIKIGKNLSDIFNTYSELKQWPTVAV----PMKAGSASFHSGLLIHGAGANMTSERRAAMAIQMMPDNMIFNGKQNILTKKQMNELRIGVSVFNDDNLNPILYK 298          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig70736.16884.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A814ZQJ5_9BILA5.210e-7650.00Hypothetical protein n=5 Tax=Rotaria TaxID=231623 ... [more]
A0A818VB42_9BILA4.520e-7451.39Hypothetical protein n=4 Tax=Rotaria sordida TaxID... [more]
A0A819D5E1_9BILA1.780e-7150.20Hypothetical protein n=4 Tax=Rotaria sordida TaxID... [more]
A0A818WGT2_9BILA2.280e-7049.40Hypothetical protein n=17 Tax=Rotaria TaxID=231623... [more]
A0A815BQT2_9BILA3.210e-7048.21Hypothetical protein n=1 Tax=Didymodactylos carnos... [more]
A0A2D8UDG0_9BACT2.300e-6948.58Phytanoyl-CoA dioxygenase n=1 Tax=Gemmatimonadetes... [more]
A0A814Q6M7_9BILA1.830e-6848.21Hypothetical protein n=3 Tax=Rotaria sordida TaxID... [more]
A0A815BCC2_ADIRI3.720e-6847.41Hypothetical protein n=3 Tax=Adineta ricciae TaxID... [more]
A0A814L7G8_9BILA4.920e-6848.61Hypothetical protein n=3 Tax=Rotaria sordida TaxID... [more]
A0A813X960_9BILA1.540e-6749.57Hypothetical protein n=8 Tax=Rotaria sp. Silwood1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig70736contigM-pyrifera_M_contig70736:7..994 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score195.7
Seed ortholog evalue2.6e-47
Seed eggNOG ortholog509635.N824_27960
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Phytanoyl-CoA dioxygenase (PhyH)
EggNOG OGs1IQAS@117747,4NJ09@976,COG5285@1,COG5285@2
COG Functional cat.Q
Best tax levelSphingobacteriia
Best eggNOG OGNA|NA|NA
Exons3
Model size744
Cds size744
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig70736.16884.1prot_M-pyrifera_M_contig70736.16884.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig70736 7..994 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816600.8640354-CDS-M-pyrifera_M_contig70736:6..601622816600.8640354-CDS-M-pyrifera_M_contig70736:6..60Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig70736 7..60 +
1692278070.5609736-CDS-M-pyrifera_M_contig70736:6..601692278070.5609736-CDS-M-pyrifera_M_contig70736:6..60Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig70736 7..60 +
1622816600.8766034-CDS-M-pyrifera_M_contig70736:268..6171622816600.8766034-CDS-M-pyrifera_M_contig70736:268..617Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig70736 269..617 +
1692278070.575465-CDS-M-pyrifera_M_contig70736:268..6171692278070.575465-CDS-M-pyrifera_M_contig70736:268..617Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig70736 269..617 +
1622816600.889913-CDS-M-pyrifera_M_contig70736:653..9941622816600.889913-CDS-M-pyrifera_M_contig70736:653..994Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig70736 654..994 +
1692278070.5887265-CDS-M-pyrifera_M_contig70736:653..9941692278070.5887265-CDS-M-pyrifera_M_contig70736:653..994Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig70736 654..994 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig70736.16884.1

>prot_M-pyrifera_M_contig70736.16884.1 ID=prot_M-pyrifera_M_contig70736.16884.1|Name=mRNA_M-pyrifera_M_contig70736.16884.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=248bp
VDDAVDQRGSQKFASGEETNVDAEYYDNVFTQRVNLWMTHEGVRELWESA
GMVFGRFLTCLEFGLEGKGDGMAIWHDQALIKEPWANPTSPHVDNVYWSF
SSPHAGSLWVALDDATLQNGCLHFAPGTHKLLRWGEDAGEDAYLEVKIGK
NMGDMFSHPSLVASPTPVTMRPYEMRAGSLSFHNGLTVHAAGPNFTPYRR
RAMTLQMMPLNAKFNGIQNILPDHRFKSLTLNSPLLPHDDNPILFKR*
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mRNA from alignment at M-pyrifera_M_contig70736:7..994+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig70736.16884.1 ID=mRNA_M-pyrifera_M_contig70736.16884.1|Name=mRNA_M-pyrifera_M_contig70736.16884.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=988bp|location=Sequence derived from alignment at M-pyrifera_M_contig70736:7..994+ (Macrocystis pyrifera P11B4 male)
GTAGACGACGCCGTTGACCAGAGAGGGTCGCAAAAATTCGCCTCTGGAGA AGAGGTAGGTGACTATGGAGTGTGGTAATATGAGGAAGGAAGGATGTGAT TGGTTTGAGGGAAAGATTTTGGTGCTTAAGGTGTGAGAATGAGGGTGATG GAGGTTGAGGATCTTTTGGAGGTGAAGGAGGGTGTTTAGGGGTGTATTGT TGTGACAATACATGTTCTATACATATCATACACATCTGAAATACTTTCTT GTGCAGGATAAGACTAACGTTGACGCAGAATATTACGACAATGTCTTTAC GCAGCGTGTGAATTTATGGATGACACATGAAGGTGTGAGGGAGTTATGGG AAAGTGCTGGTATGGTGTTTGGTCGTTTCTTGACATGCTTGGAATTTGGA TTGGAAGGAAAAGGAGATGGGATGGCAATTTGGCATGATCAGGCGTTGAT CAAGGAACCTTGGGCCAACCCTACATCACCACACGTAGACAATGTGTATT GGAGCTTCTCATCACCACATGCTGGCTCTTTATGGGTGGCTCTGGACGAC GCAACATTGCAAAATGGCTGTTTGCACTTTGCCCCAGGCACTCACAAGCT GTTACGGTGGGGTAGAGATGGTAAAGATATGCAGGGGTGGGATCGAGGGG AGGATGCTGGGGAGGATGCTTATTTGGAGGTGAAGATTGGGAAAAACATG GGTGATATGTTTTCACATCCATCACTTGTTGCTTCTCCAACTCCAGTAAC AATGCGTCCGTACGAAATGCGTGCTGGATCTCTTTCTTTCCACAATGGCC TTACAGTCCATGCAGCAGGTCCCAATTTCACCCCATATCGAAGAAGAGCA ATGACTTTGCAAATGATGCCACTCAACGCCAAGTTCAACGGCATCCAAAA CATCCTCCCTGACCACAGATTCAAATCTCTCACCCTCAATAGCCCCCTCC TTCCACATGATGACAACCCTATTCTGTTCAAAAGATGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig70736:7..994+

>mRNA_M-pyrifera_M_contig70736.16884.1 ID=mRNA_M-pyrifera_M_contig70736.16884.1|Name=mRNA_M-pyrifera_M_contig70736.16884.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1488bp|location=Sequence derived from alignment at M-pyrifera_M_contig70736:7..994+ (Macrocystis pyrifera P11B4 male)
GTAGACGACGCCGTTGACCAGAGAGGGTCGCAAAAATTCGCCTCTGGAGA
AGAGGTAGACGACGCCGTTGACCAGAGAGGGTCGCAAAAATTCGCCTCTG
GAGAAGAGACTAACGTTGACGCAGAATATTACGACAATGTCTTTACGCAG
CGTGTGAATTTATGGATGACACATGAAGGTGTGAGGGAGTTATGGGAAAG
TGCTGGTATGGTGTTTGGTCGTTTCTTGACATGCTTGGAATTTGGATTGG
AAGGAAAAGGAGATGGGATGGCAATTTGGCATGATCAGGCGTTGATCAAG
GAACCTTGGGCCAACCCTACATCACCACACGTAGACAATGTGTATTGGAG
CTTCTCATCACCACATGCTGGCTCTTTATGGGTGGCTCTGGACGACGCAA
CATTGCAAAATGGCTGTTTGCACTTTGCCCCAGGCACTCACAAGCTGTTA
CGGTGGGACTAACGTTGACGCAGAATATTACGACAATGTCTTTACGCAGC
GTGTGAATTTATGGATGACACATGAAGGTGTGAGGGAGTTATGGGAAAGT
GCTGGTATGGTGTTTGGTCGTTTCTTGACATGCTTGGAATTTGGATTGGA
AGGAAAAGGAGATGGGATGGCAATTTGGCATGATCAGGCGTTGATCAAGG
AACCTTGGGCCAACCCTACATCACCACACGTAGACAATGTGTATTGGAGC
TTCTCATCACCACATGCTGGCTCTTTATGGGTGGCTCTGGACGACGCAAC
ATTGCAAAATGGCTGTTTGCACTTTGCCCCAGGCACTCACAAGCTGTTAC
GGTGGGGGGAGGATGCTGGGGAGGATGCTTATTTGGAGGTGAAGATTGGG
AAAAACATGGGTGATATGTTTTCACATCCATCACTTGTTGCTTCTCCAAC
TCCAGTAACAATGCGTCCGTACGAAATGCGTGCTGGATCTCTTTCTTTCC
ACAATGGCCTTACAGTCCATGCAGCAGGTCCCAATTTCACCCCATATCGA
AGAAGAGCAATGACTTTGCAAATGATGCCACTCAACGCCAAGTTCAACGG
CATCCAAAACATCCTCCCTGACCACAGATTCAAATCTCTCACCCTCAATA
GCCCCCTCCTTCCACATGATGACAACCCTATTCTGTTCAAAAGATGAGGG
AGGATGCTGGGGAGGATGCTTATTTGGAGGTGAAGATTGGGAAAAACATG
GGTGATATGTTTTCACATCCATCACTTGTTGCTTCTCCAACTCCAGTAAC
AATGCGTCCGTACGAAATGCGTGCTGGATCTCTTTCTTTCCACAATGGCC
TTACAGTCCATGCAGCAGGTCCCAATTTCACCCCATATCGAAGAAGAGCA
ATGACTTTGCAAATGATGCCACTCAACGCCAAGTTCAACGGCATCCAAAA
CATCCTCCCTGACCACAGATTCAAATCTCTCACCCTCAATAGCCCCCTCC
TTCCACATGATGACAACCCTATTCTGTTCAAAAGATGA
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