mRNA_M-pyrifera_M_contig70732.16882.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig70732.16882.1
Unique NamemRNA_M-pyrifera_M_contig70732.16882.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig70732.16882.1 vs. uniprot
Match: A0A5A8CX79_CAFRO (Kynureninase n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CX79_CAFRO)

HSP 1 Score: 130 bits (327), Expect = 5.070e-33
Identity = 63/138 (45.65%), Postives = 94/138 (68.12%), Query Frame = 1
Query:    4 MKREFRPDEGALGWKITNPPILSLAPIKASLDLFEEATMPALRRKAIRLTAYLERLIKHTVEGTHIISPEDREWRGSQLSLTF--PFPAQRVADRLVAEGAVIDFRYPNVIRVAPTAMYNSFTDCVDFANTLAAILKE 411
            M   F P  GA G++++NPP+L +A ++ASL LF++ATMPALRRK++ +TAYL  L+   +    +++P++   RG+QLSL F    P +RV + L  E  ++D R P+ +RVAP  +YN F DC DF +TLAA+L+E
Sbjct:  336 MASAFVPSPGAFGFQLSNPPVLCVAALRASLRLFDKATMPALRRKSLAVTAYLRALVAARLPSVKVLTPDEPSSRGAQLSLEFGSDVPLRRVYEALQRESVIVDIREPSAMRVAPAPLYNGFRDCWDFVDTLAAVLEE 473          
BLAST of mRNA_M-pyrifera_M_contig70732.16882.1 vs. uniprot
Match: A0A812XX45_9DINO (Kynureninase n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812XX45_9DINO)

HSP 1 Score: 130 bits (327), Expect = 1.720e-32
Identity = 63/138 (45.65%), Postives = 94/138 (68.12%), Query Frame = 1
Query:    4 MKREFRPDEGALGWKITNPPILSLAPIKASLDLFEEATMPALRRKAIRLTAYLERLIKHTVEGTHIISPEDREWRGSQLSLTFP--FPAQRVADRLVAEGAVIDFRYPNVIRVAPTAMYNSFTDCVDFANTLAAILKE 411
            M   F P  GA G++++NPP+L +A ++ASL LF++ATMPALRRK++ +TAYL  L+   +    +++P++   RG+QLSL F    P +RV + L  E  ++D R P+ +RVAP  +YN F DC DF +TLAA+L+E
Sbjct:  496 MASAFVPSPGAFGFQLSNPPVLCVAALRASLRLFDKATMPALRRKSLAVTAYLRALVAARLPSVKVLTPDEPSSRGAQLSLEFASDVPLRRVYEALQRESVIVDIREPSAMRVAPAPLYNGFRDCWDFVDTLAAVLEE 633          
BLAST of mRNA_M-pyrifera_M_contig70732.16882.1 vs. uniprot
Match: A0A2C6BXP2_9BACT (Kynureninase n=1 Tax=Lewinellaceae bacterium SD302 TaxID=2014804 RepID=A0A2C6BXP2_9BACT)

HSP 1 Score: 128 bits (321), Expect = 1.790e-32
Identity = 70/135 (51.85%), Postives = 91/135 (67.41%), Query Frame = 1
Query:    4 MKREFRPDEGALGWKITNPPILSLAPIKASLDLFEEATMPALRRKAIRLTAYLERLIKHTVEGT-HIISPEDREWRGSQLSLTFPFPAQRVADRLVAEGAVIDFRYPNVIRVAPTAMYNSFTDCVDFANTLAAIL 405
            M+  F+P  GA GW+++NPPILSLA I ASL +F+EA M  LR+KAI+LTAYLE L++   E T  II+P D E RGSQLS+      + + DRL A+G + D+R P+VIRVAP  +YNSF D   F   L  +L
Sbjct:  287 MRDPFKPIPGAEGWQLSNPPILSLAAIWASLKIFDEAGMDRLRKKAIKLTAYLESLVQQLGEDTVKIITPSDPERRGSQLSIQVRNADRSLFDRLTAKGVIADWREPDVIRVAPVPLYNSFEDAWRFYRALEEVL 421          
BLAST of mRNA_M-pyrifera_M_contig70732.16882.1 vs. uniprot
Match: S9QLU5_9DELT (Kynureninase n=3 Tax=Cystobacter TaxID=42 RepID=S9QLU5_9DELT)

HSP 1 Score: 128 bits (321), Expect = 1.840e-32
Identity = 66/132 (50.00%), Postives = 87/132 (65.91%), Query Frame = 1
Query:    1 EMKREFRPDEGALGWKITNPPILSLAPIKASLDLFEEATMPALRRKAIRLTAYLERLIKHTVEG-THIISPEDREWRGSQLSLTFPFPAQRVADRLVAEGAVIDFRYPNVIRVAPTAMYNSFTDCVDFANTL 393
            +MK +F P  GA GW ++NPPI+ +A ++ASL+LF+ ATMPALR K+ +LT YLE LI    EG  H ++P D   RG+ LSL F    QR+ + L AEG   DFRYP++IR AP  +YNSF D   F + L
Sbjct:  289 QMKPDFEPAPGAEGWVLSNPPIIQMAALRASLELFDRATMPALRAKSEKLTGYLEFLIDRLPEGFVHSLTPRDPGQRGAHLSLRFTKDPQRMLETLRAEGIHCDFRYPDIIRAAPVPLYNSFLDVHRFVSVL 420          
BLAST of mRNA_M-pyrifera_M_contig70732.16882.1 vs. uniprot
Match: UPI0019AA4271 (Kynureninase n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=UPI0019AA4271)

HSP 1 Score: 128 bits (321), Expect = 2.420e-32
Identity = 65/138 (47.10%), Postives = 93/138 (67.39%), Query Frame = 1
Query:    1 EMKREFRPDEGALGWKITNPPILSLAPIKASLDLFEEATMPALRRKAIRLTAYLERLIKHTV---EGTHIISPEDREWRGSQLSLTFPFPAQRVADRLVAEGAVIDFRYPNVIRVAPTAMYNSFTDCVDFANTLAAIL 405
            +++ +F P +GA GW+I+NPPILS+AP++ASL++F+ ATMPA+R K+I+LTAYL  L++ +    E   I +P + E +G QLS+     A+ V D L A GA  DFR PNVIR APT +YN+F +C  F     + L
Sbjct:  288 QLEPDFEPRKGADGWQISNPPILSMAPLQASLEIFDRATMPAVRAKSIKLTAYLRYLLERSPSFGENFDITTPRETEAQGCQLSIVVHENAKAVQDALCAAGATCDFREPNVIRAAPTPLYNTFHECWRFVRIFESCL 425          
BLAST of mRNA_M-pyrifera_M_contig70732.16882.1 vs. uniprot
Match: A0A2V9UGS7_9BACT (Kynureninase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9UGS7_9BACT)

HSP 1 Score: 127 bits (318), Expect = 3.910e-32
Identity = 63/137 (45.99%), Postives = 91/137 (66.42%), Query Frame = 1
Query:    1 EMKREFRPDEGALGWKITNPPILSLAPIKASLDLFEEATMPALRRKAIRLTAYLERLIK-HTVEGTHIISPEDREWRGSQLSLTFPFPAQRVADRLVAEGAVIDFRYPNVIRVAPTAMYNSFTDCVDFANTLAAILK 408
            EMK EFRP  GA GW+++NPPIL+LA ++AS+D+F EA +  LR K++ LT YL+ L++ H      +I+P + E RGSQLS+  P  A+    RL AEG   D+R P+++RVAP  +YNS+ D   F    A++L+
Sbjct:  273 EMKSEFRPMMGAEGWQLSNPPILALAALRASMDIFHEAGIERLRAKSVSLTGYLDFLLQQHASPKLSVITPHEAERRGSQLSIRVPQHARSSCSRLAAEGVSFDWREPDIVRVAPVPLYNSYQDVYRFVQRFASVLE 409          
BLAST of mRNA_M-pyrifera_M_contig70732.16882.1 vs. uniprot
Match: UPI000F610D4E (kynureninase n=1 Tax=Nonlabens xiamenensis TaxID=2341043 RepID=UPI000F610D4E)

HSP 1 Score: 127 bits (318), Expect = 4.600e-32
Identity = 64/135 (47.41%), Postives = 93/135 (68.89%), Query Frame = 1
Query:    1 EMKREFRPDEGALGWKITNPPILSLAPIKASLDLFEEATMPALRRKAIRLTAYLERLIKHTVEGTHI--ISPEDREWRGSQLSLTFPFPAQRVADRLVAEGAVIDFRYPNVIRVAPTAMYNSFTDCVDFANTLAA 399
            +M+ +F P  GA GW+++NPPILS+A I+ASLDLF +A   ALR K+++LTAYLE L++  ++G  I  I+P D  WRG QLSL      + + D + A+G + D+R P+VIR+AP  +YNSF DC  F + L++
Sbjct:  285 KMRDDFEPMYGAEGWQLSNPPILSMAAIRASLDLFSQAGFKALREKSVQLTAYLEFLLQQ-MQGDRISIITPSDPNWRGCQLSLAVKDADRSLFDAITAKGVIADWREPDVIRIAPVPLYNSFADCWKFVDILSS 418          
BLAST of mRNA_M-pyrifera_M_contig70732.16882.1 vs. uniprot
Match: A0A2W4PEJ7_9PROT (Kynureninase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4PEJ7_9PROT)

HSP 1 Score: 127 bits (318), Expect = 4.730e-32
Identity = 69/139 (49.64%), Postives = 92/139 (66.19%), Query Frame = 1
Query:    1 EMKREFRPDEGALGWKITNPPILSLAPIKASLDLFEEATMPALRRKAIRLTAYLERLIK-HTVEGTHIISPEDREWRGSQLSLTF---PFPAQRVADRLVAEGAVIDFRYPNVIRVAPTAMYNSFTDCVDFANTLAAIL 405
            +M + F P  GA GW+I+NPPILS AP+ ASL+LFE A M ALRRK++ LTAYL  L++ H  E   I++P++ + RG QLSL     P  A+ + D L   G V D+R P+VIRVAP  +YN+FT+  DF   L A+L
Sbjct:  284 DMPQAFSPLPGAEGWQISNPPILSAAPLLASLELFEAAGMAALRRKSLDLTAYLVALLREHVYEAVSILTPDEADARGCQLSLRLNRAPHEARAIHDALTDRGMVCDWREPDVIRVAPVPLYNTFTEVWDFVAALKALL 422          
BLAST of mRNA_M-pyrifera_M_contig70732.16882.1 vs. uniprot
Match: A0A520X9J4_9GAMM (Kynureninase n=1 Tax=Chromatiales bacterium TaxID=2026725 RepID=A0A520X9J4_9GAMM)

HSP 1 Score: 126 bits (317), Expect = 7.290e-32
Identity = 67/144 (46.53%), Postives = 93/144 (64.58%), Query Frame = 1
Query:    1 EMKREFRPDEGALGWKITNPPILSLAPIKASLDLFEEATMPALRRKAIRLTAYLERLIKHTVEG-----THIISPEDREWRGSQLSLTFPFPAQRVADRLVAEGAVIDFRYPNVIRVAPTAMYNSFTDCVDFANTLAAILKETE 417
            +MK  F+P EGA GW+++N PIL +A +KASLD+F EA MPALR K+ RLTAYLE  I    +      T +I+P + E RG Q+S+      +++ D ++A G ++DFR P VIR+AP  +YNSFTD   F   + A+L E E
Sbjct:  284 QMKSGFQPMEGAEGWQLSNVPILGMAAMKASLDVFAEAGMPALREKSERLTAYLEFTIDAVAQEFPDARTSLITPREPEQRGCQISMDVAGRERKLFDDMIAAGVIVDFREPCVIRMAPVPLYNSFTDVFTFGKVMRALLAEGE 427          
BLAST of mRNA_M-pyrifera_M_contig70732.16882.1 vs. uniprot
Match: A0A512B0U8_9BACT (Kynureninase n=2 Tax=Adhaeribacter TaxID=299566 RepID=A0A512B0U8_9BACT)

HSP 1 Score: 125 bits (314), Expect = 2.010e-31
Identity = 67/138 (48.55%), Postives = 89/138 (64.49%), Query Frame = 1
Query:    1 EMKREFRPDEGALGWKITNPPILSLAPIKASLDLFEEATMPALRRKAIRLTAYLERLIKH---TVEGTHIISPEDREWRGSQLSLTFPFPAQRVADRLVAEGAVIDFRYPNVIRVAPTAMYNSFTDCVDFANTLAAIL 405
            +M++ F+P  GA GW+++N  I  +A  KASLD+F+ ATMPALR K+ +LT YLE LI H   T E   II+P D  WRG QLSL      ++V ++L   G ++D+R PNVIRVAPT +YN+F D   FA  L   L
Sbjct:  289 QMRKGFKPMPGAAGWQLSNASIFPMAIHKASLDIFDAATMPALRAKSEKLTGYLEYLINHLGATQEILEIITPADPAWRGCQLSLLVHQNGRQVFEKLTQAGVILDWREPNVIRVAPTPLYNTFEDVFCFAEILRQSL 426          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig70732.16882.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8CX79_CAFRO5.070e-3345.65Kynureninase n=4 Tax=Cafeteria roenbergensis TaxID... [more]
A0A812XX45_9DINO1.720e-3245.65Kynureninase n=1 Tax=Symbiodinium sp. KB8 TaxID=23... [more]
A0A2C6BXP2_9BACT1.790e-3251.85Kynureninase n=1 Tax=Lewinellaceae bacterium SD302... [more]
S9QLU5_9DELT1.840e-3250.00Kynureninase n=3 Tax=Cystobacter TaxID=42 RepID=S9... [more]
UPI0019AA42712.420e-3247.10Kynureninase n=1 Tax=Anaerolineae bacterium TaxID=... [more]
A0A2V9UGS7_9BACT3.910e-3245.99Kynureninase n=1 Tax=Acidobacteria bacterium TaxID... [more]
UPI000F610D4E4.600e-3247.41kynureninase n=1 Tax=Nonlabens xiamenensis TaxID=2... [more]
A0A2W4PEJ7_9PROT4.730e-3249.64Kynureninase n=1 Tax=Proteobacteria bacterium TaxI... [more]
A0A520X9J4_9GAMM7.290e-3246.53Kynureninase n=1 Tax=Chromatiales bacterium TaxID=... [more]
A0A512B0U8_9BACT2.010e-3148.55Kynureninase n=2 Tax=Adhaeribacter TaxID=299566 Re... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig70732contigM-pyrifera_M_contig70732:736..1170 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score128.3
Seed ortholog evalue3e-27
Seed eggNOG ortholog1242864.D187_006653
Preferred namekynU
KEGG rclassRC00284,RC00415
KEGG koko:K01556
KEGG ReactionR00987,R02668,R03936
KEGG Pathwayko00380,ko01100,map00380,map01100
KEGG ModuleM00038
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016054,GO:0016787,GO:0016822,GO:0016823,GO:0019439,GO:0019441,GO:0019752,GO:0030429,GO:0032787,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043420,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0070189,GO:0071704,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606
EggNOG free text desc.Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively
EggNOG OGs1MUKN@1224,2WUNV@28221,2YV4X@29,42YAM@68525,COG3844@1,COG3844@2
EC3.7.1.3
COG Functional cat.F
Best tax levelMyxococcales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons1
Model size435
Cds size432
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816600.7810256-CDS-M-pyrifera_M_contig70732:735..11671622816600.7810256-CDS-M-pyrifera_M_contig70732:735..1167Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig70732 736..1167 -
1692278070.5059292-CDS-M-pyrifera_M_contig70732:735..11671692278070.5059292-CDS-M-pyrifera_M_contig70732:735..1167Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig70732 736..1167 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816600.791952-UTR-M-pyrifera_M_contig70732:1167..11701622816600.791952-UTR-M-pyrifera_M_contig70732:1167..1170Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig70732 1168..1170 -
1692278070.526395-UTR-M-pyrifera_M_contig70732:1167..11701692278070.526395-UTR-M-pyrifera_M_contig70732:1167..1170Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig70732 1168..1170 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig70732.16882.1prot_M-pyrifera_M_contig70732.16882.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig70732 736..1167 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig70732.16882.1

>prot_M-pyrifera_M_contig70732.16882.1 ID=prot_M-pyrifera_M_contig70732.16882.1|Name=mRNA_M-pyrifera_M_contig70732.16882.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=144bp
MKREFRPDEGALGWKITNPPILSLAPIKASLDLFEEATMPALRRKAIRLT
AYLERLIKHTVEGTHIISPEDREWRGSQLSLTFPFPAQRVADRLVAEGAV
IDFRYPNVIRVAPTAMYNSFTDCVDFANTLAAILKETEEEEKE*
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mRNA from alignment at M-pyrifera_M_contig70732:736..1170-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig70732.16882.1 ID=mRNA_M-pyrifera_M_contig70732.16882.1|Name=mRNA_M-pyrifera_M_contig70732.16882.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=435bp|location=Sequence derived from alignment at M-pyrifera_M_contig70732:736..1170- (Macrocystis pyrifera P11B4 male)
GAAATGAAGCGAGAATTTCGTCCAGACGAAGGTGCGTTAGGTTGGAAGAT TACAAATCCCCCAATCTTGTCCTTAGCTCCCATCAAGGCATCTTTGGACC TCTTTGAAGAGGCCACCATGCCAGCTCTCCGCCGCAAAGCAATTCGATTG ACTGCATATTTGGAGCGCCTCATCAAACACACTGTAGAAGGCACACACAT CATCTCTCCAGAAGATCGTGAATGGAGAGGCTCCCAACTGTCTCTCACGT TTCCATTCCCAGCGCAACGTGTTGCAGATCGTCTTGTTGCAGAAGGAGCA GTCATCGACTTTCGGTATCCAAATGTCATCCGTGTGGCTCCCACAGCAAT GTACAATTCCTTCACAGACTGTGTAGACTTTGCCAACACCCTTGCCGCCA TCCTCAAAGAAACAGAAGAAGAAGAGAAGGAATGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig70732:736..1170-

>mRNA_M-pyrifera_M_contig70732.16882.1 ID=mRNA_M-pyrifera_M_contig70732.16882.1|Name=mRNA_M-pyrifera_M_contig70732.16882.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=864bp|location=Sequence derived from alignment at M-pyrifera_M_contig70732:736..1170- (Macrocystis pyrifera P11B4 male)
ATGAAGCGAGAATTTCGTCCAGACGAAGGTGCGTTAGGTTGGAAGATTAC
AAATCCCCCAATCTTGTCCTTAGCTCCCATCAAGGCATCTTTGGACCTCT
TTGAAGAGGCCACCATGCCAGCTCTCCGCCGCAAAGCAATTCGATTGACT
GCATATTTGGAGCGCCTCATCAAACACACTGTAGAAGGCACACACATCAT
CTCTCCAGAAGATCGTGAATGGAGAGGCTCCCAACTGTCTCTCACGTTTC
CATTCCCAGCGCAACGTGTTGCAGATCGTCTTGTTGCAGAAGGAGCAGTC
ATCGACTTTCGGTATCCAAATGTCATCCGTGTGGCTCCCACAGCAATGTA
CAATTCCTTCACAGACTGTGTAGACTTTGCCAACACCCTTGCCGCCATCC
TCAAAGAAACAGAAGAAGAAGAGAAGGAATGAATGAAGCGAGAATTTCGT
CCAGACGAAGGTGCGTTAGGTTGGAAGATTACAAATCCCCCAATCTTGTC
CTTAGCTCCCATCAAGGCATCTTTGGACCTCTTTGAAGAGGCCACCATGC
CAGCTCTCCGCCGCAAAGCAATTCGATTGACTGCATATTTGGAGCGCCTC
ATCAAACACACTGTAGAAGGCACACACATCATCTCTCCAGAAGATCGTGA
ATGGAGAGGCTCCCAACTGTCTCTCACGTTTCCATTCCCAGCGCAACGTG
TTGCAGATCGTCTTGTTGCAGAAGGAGCAGTCATCGACTTTCGGTATCCA
AATGTCATCCGTGTGGCTCCCACAGCAATGTACAATTCCTTCACAGACTG
TGTAGACTTTGCCAACACCCTTGCCGCCATCCTCAAAGAAACAGAAGAAG
AAGAGAAGGAATGA
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