mRNA_M-pyrifera_M_contig70699.16878.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig70699.16878.1
Unique NamemRNA_M-pyrifera_M_contig70699.16878.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig70699.16878.1 vs. uniprot
Match: A0A1X7VTV8_AMPQE (Protein kinase domain-containing protein n=2 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7VTV8_AMPQE)

HSP 1 Score: 146 bits (369), Expect = 2.960e-36
Identity = 95/337 (28.19%), Postives = 168/337 (49.85%), Query Frame = 1
Query:   49 AESFVDPEVLGVGQYGMVFRARCARAIDV--RKLYAVKLIFNY---GLATNQVRNSYDNELDILSHLPPHPNVVRYWGQFVDEVPEWAISLLPAVPREAATY--TDEHGRTRRRKAQFLVIEYYPVTVRVWLRSRHISRSNPLPFPVLIRLLRDLLRALTHLHRLGVCHADLKPDNLVL----SHTGSLAVIDFGCALRLSPPLLELSFNPHAIAGGNAMHLAPEVHNAFERGRAKAARGEPP--------EECVSYLHQSVWAAGALAHELAT-NTHPLPDWPVGHGSMGNHHYDTADLPPLPADY-PERFRSLVDHMLEPRPADRCSIEEALEAM 996
            A  F+   +L   Q+G+V  + C  A      KLYAVKLIFN+     +++ + N ++NE  +LS LPPHP +++YW QFV  +P   +  +   P+E       D+H     RK QF+V++Y+P T++ +L       + P+ F +++ +   +L A ++L    +CH DLK  N ++         + + DFG A++ S   +   +      GGN  HL PE+ + +   +   +R + P        +  + Y  Q  +A G L +E+ +   HPLPD+P+ +   G   Y  +D+  LP  Y  +++  L+  ++   P  R ++E  L+ +
Sbjct:   12 ATDFLISHLLSADQHGIVVASYCRVAGHPFPSKLYAVKLIFNFTDDDYSSSVLSNHFENEWLLLSSLPPHPQIIKYWCQFVSVIP---MEFVECCPQEVCKSFPKDKHFT---RKGQFIVLDYHPQTLQEFLTK---EENKPVDFKIILSISSQILSAASYLESNMICHLDLKLANCLVRGEEEDNPHIVLCDFGSAVQFSDSTMSTQWCHGLSLGGNRAHLCPELLSQYYSYKTSTSRLQQPSAAPISLAQRLLCYKGQPSFAVGVLLYEVGSCGEHPLPDYPLNYMKEGVVTYGESDIAELPGAYCHQQYFDLLKSLIACDPKQRPNLEHTLDTI 339          
BLAST of mRNA_M-pyrifera_M_contig70699.16878.1 vs. uniprot
Match: A0A1A9W183_9MUSC (Protein kinase domain-containing protein n=1 Tax=Glossina brevipalpis TaxID=37001 RepID=A0A1A9W183_9MUSC)

HSP 1 Score: 105 bits (263), Expect = 1.770e-21
Identity = 90/322 (27.95%), Postives = 142/322 (44.10%), Query Frame = 1
Query:  148 AVKLIFNYGLATNQV-------------RNSYDNEL---------DILSHLPPHPNVVRYWGQFVDEVPEWAIS-LLPAVPREAATYTDEHGRTRRRKAQFLVIEYYPVTVRVWLRSRHISRSNPLPFPVLIRLLRDLLRALTHLHRLGVCHADLKPDNLVLSHTGS-----LAVIDFGCALRLSPPLLELSFNPHAI-AGGNAMHLAPEVHNAFERGRAKAARGEP-PEECVSYLHQSVWAAGALAHELATNTHPLPDWPVGHG--------SMGNHHYDTADLPPLPADYPERFRSLVDHMLEPRPADRCSIEEALEAMQ 999
            A+K++FNY + +N +             R  Y +E+         D    LP HPN+VR +G F DEV +     LL  + +      + +GR     + +L+++ Y   +R +L    +S    L       LL  LL A+ H+   G+ H DLK DN+++          L + DFGC L      L++ ++   +  GGNA  +APE+ N            EP P   ++Y    +WA GA+A+E+    +P      G          S+ N  Y   DLPPL  + P   + L+ ++L P PA R S + A   +Q
Sbjct:  329 ALKMMFNYDIQSNALAILRAMYKETVPARQRYMHEVAETWEQHIQDQTLLLPAHPNIVRMYGFFCDEVRQLPGGHLLYPIAQPQRINPNGYGRNM---SLYLLMKRYDYNLRAFLNENQVSTREKL------LLLAQLLEAVAHISCHGIAHRDLKSDNILIELNEEDSPPLLVLSDFGCCLADRVHGLQVPYSSLDVDKGGNAALMAPEIINK-----------EPGPFSVLNYSKADLWACGAIAYEIFGLNNPFYSSSGGLAAARGEQTFSLRNSEYRKEDLPPLTDECPFLVQQLIYNILSPSPAKRVSPDIAANILQ 630          
BLAST of mRNA_M-pyrifera_M_contig70699.16878.1 vs. uniprot
Match: UPI001470FD0D (serine/threonine-protein kinase PINK1, mitochondrial n=1 Tax=Thalassophryne amazonica TaxID=390379 RepID=UPI001470FD0D)

HSP 1 Score: 103 bits (257), Expect = 8.740e-21
Identity = 83/250 (33.20%), Postives = 112/250 (44.80%), Query Frame = 1
Query:  232 LPPHPNVVRYWGQFVDEVPEWAISLLPAVPREAATYTD------EHGRTRRRKAQFLVIEYYPVTVRVWLR-SRHISRSNPLPFPVLIRLLRDLLRALTHLHRLGVCHADLKPDNLVLSHTGS----LAVIDFGCALRLSPPLLELSFNPHAI-AGGNAMHLAPEVHNAFERGRAKAARGEPPEECVSYLHQSVWAAGALAHELATNTHPLPDWPVGHGSMGNHHYDTADLPPLPADYPERFRSLVDHML 945
            L  HPNV+R +  F DEVP     LLP    E   Y D              +  FLV++ YP T+R +L  S  +SR   L       ++  LL  + HL R GV H DLK DN++L         L + DFGC L  +   L+L FN   +  GGNA  +APEV  A     A           + Y     WA GA+++E+    +P     VG   + + HY    LP LP+  P   + LV H+L
Sbjct:  254 LSAHPNVIRVYRAFTDEVP-----LLPGAKEE---YPDVLPARLNPAGLGNNRTLFLVMKNYPYTLRQYLEVSTPVSRHGSL-------MVLQLLEGVDHLCRHGVAHRDLKSDNVLLEFDSDGCPRLVITDFGCCLTQNNSSLQLHFNSKWVNRGGNASLMAPEVSTAVPGHGA----------VIDYSKADAWAVGAISYEIFGQKNPFYR-AVG---LESRHYQEEQLPALPSSVPADVQ-LVIHLL 473          
BLAST of mRNA_M-pyrifera_M_contig70699.16878.1 vs. uniprot
Match: A0A2P6VGZ7_9CHLO (Wee1 kinase isoform A n=2 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VGZ7_9CHLO)

HSP 1 Score: 91.7 bits (226), Expect = 8.780e-17
Identity = 95/321 (29.60%), Postives = 131/321 (40.81%), Query Frame = 1
Query:   58 FVDPEVLGVGQYGMVFRARCARAIDVRKLYAVKLIFNYGLATNQVRNSYDNELDILSHLPPHPNVVRYWGQFVDEVPEWAISLLPAVPREAATYTDEHGRTRRRKAQFLVIEYYPVTVRVWLRSRHISRSNPLPFPVLIRLLRDLLRALTHLHRLGVCHADLKPDNLVLSH------TGSLAVIDFGCALRLSPPLLELSFNPHAIAGGNAMHLAPEVHNAFERGRAKAARGEPPEECVSYLHQS-VWAAGALAHELATNTHPLPDWPVGHGSMGNHHYD--TADLPPLPADYPERFRSLVDHMLEPRPADRCSIEEALEA 993
            F +  +LG G +  VFRAR     D R+ YAVK               Y  E  +L+HLPPHPNVV+Y+G                       +++ HG        +L +E   V++ V     H S    L  P L+ +L+     L HLHR GV H D+KPDN+ L         GS      G A    PP +           G A  L       F+ G  +    E     +  LH++ ++A GA   ELAT    LP       S G  + D     LP LP     RF  +V  ++ PRP DR + E+ L++
Sbjct:  193 FKEVGLLGQGNFSKVFRAR--HRFDGRE-YAVKRSQREARPDCPAFAQYIQEAQVLAHLPPHPNVVQYFG----------------------CWSEPHGDGEH---LYLQLEKCDVSLGV-----HASLGEQLREPDLLEILQQTAAGLAHLHRHGVAHLDVKPDNIYLQEPLEGADAGSGTGSTHGGATM--PPGVRYKLGDF----GQATPLDLNTPLGFDEGDCRYLPLEVMNGQLGQLHKADMFALGATLLELATRVE-LP-------SGGQQYQDLRAGRLPLLPT-CTRRFAGMVKALMAPRPEDRPTAEQVLQS 465          
BLAST of mRNA_M-pyrifera_M_contig70699.16878.1 vs. uniprot
Match: A0A1I7RQ13_BURXY ((pine wood nematode) hypothetical protein n=1 Tax=Bursaphelenchus xylophilus TaxID=6326 RepID=A0A1I7RQ13_BURXY)

HSP 1 Score: 90.1 bits (222), Expect = 2.880e-16
Identity = 85/323 (26.32%), Postives = 131/323 (40.56%), Query Frame = 1
Query:   91 YGMVFRARCARAIDVRKL-YAVKLIFNY--GLATNQVRNSYDNELDILSHLPP----------------HPNVVRYWGQFVDEVPEWAISLLPAVPREAATYTDEHGRTRRRKAQFLVIEYYPVTVRVW-LRSRHISRSNPLPFPVLIRLLRDLLRALTHLHRLGVCHADLKPDNLVLSHTGS-----LAVIDFGCALRLSPPLLELSFNPHAIAGGNAMHLAPEVHNAFERGRAKAARGEPPEECVSYLHQSVWAAGALAHELATNTHPLPDWPVGHGSMGNHHYDTADLPPLPADYPERFRSLVDHMLEPRPADRCSIEEA 984
            YG+  R    R  D  K   A+K++FNY   L    +      EL  L  LP                 HPN+++    FVD +P   +     +  EAA   D  G     K  F+V++ Y  T+R + LR     RS  + F         LL AL +L   G+CH D+K DN++L +        L + DFG AL       +   +     GGN    APE+  A             P + + Y    +W+AGA+ +E+    +P       +    +  Y   +LP LP+  P     L+  +L+  P++R  ++ A
Sbjct:  142 YGL--RVDGGRPSDEEKFPLALKIMFNYDYSLPERYIWEGMGTELVPLKSLPKSALVGQMGGFKPFKRQHPNIIKMHTAFVDLMPH--LREAAELFEEAAPSLDNFGLIHDPKTLFVVMKRYRTTLREYSLRMEIPKRSGQVLFG-------QLLEALVYLSDQGICHRDMKSDNILLDYDYDDEIPHLVLSDFGSALVSG--FKQTYIDEFTDLGGNIALRAPEISRA----------NLSPGKVLDYSKADLWSAGAIGYEMFGQQNPF------YSRYSSRTYQEKELPTLPSITPNVISKLIGQLLKIHPSERPDVKLA 435          
BLAST of mRNA_M-pyrifera_M_contig70699.16878.1 vs. uniprot
Match: A0A7M7K430_VARDE (Protein kinase domain-containing protein n=2 Tax=Varroa TaxID=62624 RepID=A0A7M7K430_VARDE)

HSP 1 Score: 89.4 bits (220), Expect = 6.600e-16
Identity = 98/325 (30.15%), Postives = 139/325 (42.77%), Query Frame = 1
Query:  148 AVKLIFNYGLATNQV--------------------RNSYDNELDILS---HLPPHPNVVRYWGQFVDEVP--EWAISLLP-AVPREAATYTDEHGRTRRRKAQFLVIEYYPVTVRVWLRSRHISRSNPLPFPVLIRLLRDLLRALTHLHRLGVCHADLKPDNLVLSHTGS----------LAVIDFGCALR----LSPPLLELSFNPHAIA-GGNAMHLAPEVHNAFERGRAKAARGEPPEECVSYLHQSVWAAGALAHELATNTHPLPDWPVGHGSMGNHHYDTADLPPLPADYPERFRSLVDHMLEPRPADRCSIEEALEAMQ 999
            A+K++FNY   +N                      +NS  NE  + S   +LPPHP +V     FVD VP    A  L P A+P        EHG   R    FLV++ Y  ++R +LRS  I RSN  P  V + L   L  A+ HL   G+ H D+K DN+++   G           +A+ DFGC L     +SP  L+LSF    ++ GGN   + PEV  A + G             + Y    +W+A  L +E+    +P  +     G +    Y   DLP L    P   R LV   L+  P+ R +   A   +Q
Sbjct:  302 AMKMMFNYDAESNAAAIWQSLSRECAPLQTASFGQQNSL-NESPLASREANLPPHPCIVDVKAAFVDRVPLLRGATQLYPVALPPRL----HEHG-IGRNATMFLVMKRYHCSLRSYLRSGTIERSNR-PEHVRLSLCAQLFEAVAHLVSHGIVHRDMKSDNILVELPGKTGKTAYTEPRIALSDFGCCLIPADCISP--LKLSFVSGQVSRGGNVALMPPEVQLA-KPGLLSF---------IDYSKADLWSAATLIYEVYGQRNPFFE-----GMLHPRTYMECDLPVLDKA-PLELRVLVTACLQREPSRRPTPAVAATVLQ 601          
BLAST of mRNA_M-pyrifera_M_contig70699.16878.1 vs. uniprot
Match: A0A2P6U3R9_CHLSO (Wee1 kinase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6U3R9_CHLSO)

HSP 1 Score: 88.2 bits (217), Expect = 2.000e-15
Identity = 98/335 (29.25%), Postives = 143/335 (42.69%), Query Frame = 1
Query:   40 TARAESFVDPEVLGVGQYGMVFRARCARAIDVRKLYAVKLIFNYGLATNQVRNSYDNELDILSHLPPHPNVVRYWGQFVDEVPEWAISLLPAVPREAATYTDEHGRTRRRKAQFLVIEYYPVTVRVWLRSRHISRSNPLPFPVLIRLLRDLLRALTHLHRLGVCHADLKPDNLVL---------SHTGSLAVI-------DFGCALRLSPPLLELSFNPHAIAGGNAMHLAPEVHNAFERGRAKAARGEPPEECVSYLHQS-VWAAGALAHELATNTHPLPDWPVGHGSMGNHHYD--TADLPPLPADYPERFRSLVDHMLEPRPADRCSIEEAL 987
            T   + F +  +LG G +  VFR R     D R+ YAVK               +  E  +L+HLPPHPNVV+Y+         W+         EAA    EH         ++ +E   V + +     H S    L    L+ +L  +  AL HLH+ GV H D+KPDN+ L         S +G  A         DFG A RL     +L   P ++  G+  +  PE+            RGE     +  LH++ ++A GA   ELAT T    + P G    G  + D     LP LP  + +RF +++  ++ P+P DR S E+ L
Sbjct:  197 TRYRQDFKEVGLLGQGNFSKVFRVR--HRFDGRE-YAVKRTQREARPDCPAFAQFIQEAQVLAHLPPHPNVVQYYCC-------WS---------EAAGELGEH--------LYIQLEKCDVNLGI-----HASLGEQLREGDLLDVLEQMASALAHLHKHGVAHLDVKPDNIYLQDAPEVESSSSSGGGATPPVRYKLGDFGQATRL-----DLR-TPVSVDEGDCRYQPPEL-----------LRGE-----LGQLHKADMFALGASLLELATRT----ELPTG----GQQYQDLRAGKLPMLPT-FTQRFTAMIKALMAPKPEDRPSAEKVL 468          
BLAST of mRNA_M-pyrifera_M_contig70699.16878.1 vs. uniprot
Match: E1ZQ29_CHLVA (Protein kinase domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZQ29_CHLVA)

HSP 1 Score: 85.5 bits (210), Expect = 5.600e-15
Identity = 92/340 (27.06%), Postives = 136/340 (40.00%), Query Frame = 1
Query:   40 TARAESFVDPEVLGVGQYGMVFRARCARAIDVRKLYAVKLIFNYGLATNQVRNSYDNELDILSHLPPHPNVVRYWGQFVDEVPEWAISLLPAVPREAATYTDEHGRTRRRKAQFLVIEYYPVTVRVWLRSRHISRSNPLPFPVLIRLLRDLLRALTHLHRLGVCHADLKPDNLVLSHTGSLAVI-------------------DFGCALRLSPPLLELSFNPHAIAGGNAMHLAPEVHNAFERGRAKAARGEPPEECVSYLHQSVWAAGALAHELATNTHPLPDWPVGHGSMGNHHYD---TADLPPLPADYPERFRSLVDHMLEPRPADRCSIEEALEA 993
            T   + F +  +LG G +  VFRAR     D R+ YAVK      +        +  E  +L+HLPPHP++V+Y+  + +             P +   +             +L +E   V++ +     H S    L    L+ +LR +  AL HLHR GV H D+KPDN+ L        +                   DFG A RL     +L   P A+  G+  +L  EV        AKA                ++A GA   ELAT    LP         G H Y       LP LP  + +RF +++  ++ P P DR S E+ L++
Sbjct:   36 TRYRQDFKEIGLLGQGNFSKVFRAR--HRFDGRE-YAVKRTQRAAVPDGSSFAQFIQEAQVLAHLPPHPHIVQYFSCWSE-------------PHQGGEHL------------YLQLEKCDVSLGI-----HASLGEQLKEGDLLEVLRQVASALAHLHRHGVVHMDVKPDNIYLQDLPEEEALAGGGASTWETCPGVRYKLGDFGQATRL-----DLK-TPMAVDEGDCRYLPLEVLRGELGQLAKA---------------DMFALGASLLELATRAE-LPS--------GGHQYADLRAGKLPLLPT-FTQRFANMIRTLMAPNPLDRPSAEKVLQS 311          
BLAST of mRNA_M-pyrifera_M_contig70699.16878.1 vs. uniprot
Match: U6MDQ7_9EIME (CMGC kinase, GSK family TgPK3, putative n=1 Tax=Eimeria necatrix TaxID=51315 RepID=U6MDQ7_9EIME)

HSP 1 Score: 83.6 bits (205), Expect = 1.180e-14
Identity = 63/187 (33.69%), Postives = 92/187 (49.20%), Query Frame = 1
Query:   70 EVLGVGQYGMVFRARCARAIDVRKLYAVKLIFNYGLATNQVRNSYDNELDILSHLPPHPNVVRYWGQFVDEVPEWAISLLPAVPREAATYTDEHGRTRRRKAQFL--VIEYYPVTVRVWLRSRHISRSNPLPFPVLIRLLRDLLRALTHLHRLGVCHADLKPDNLVLSH-TGSLAVIDFGCALRLSP 621
            +VLG G +G+V  ARC   ++  +L A+K +       N+       ELDI+  L  HPN+VR    F  EV E              +             +FL  V+E+ P TV   L++  +  SNPLPF ++      + R+L +LH LG+CH D+KP NL++ + T  L + DFG A RL P
Sbjct:   68 QVLGNGSFGVVTEARC---LETGELVAIKKVLQDPRYKNR-------ELDIMKELH-HPNIVRLLDYFYTEVEEXXXXXXXXXXXXXXS-------------RFLNVVMEFVPETVYRVLKT-FVRSSNPLPFLLVKLYTYQICRSLGYLHALGICHRDVKPQNLLVDYRTHVLKLCDFGSAKRLVP 229          
BLAST of mRNA_M-pyrifera_M_contig70699.16878.1 vs. uniprot
Match: A0A2C6KHS2_9APIC (Cell-cycle-associated protein kinase gsk n=1 Tax=Cystoisospora suis TaxID=483139 RepID=A0A2C6KHS2_9APIC)

HSP 1 Score: 82.4 bits (202), Expect = 6.890e-14
Identity = 65/185 (35.14%), Postives = 97/185 (52.43%), Query Frame = 1
Query:   73 VLGVGQYGMVFRARCARAIDVRKLYAVKLIFNYGLATNQVRNSYDNELDILSHLPPHPNVVRYWGQFVDEVPEWAISLLPAVPREAATYTDEHGRTRRRKAQFLVIEYYPVTVRVWLRSRHISRSNPLPFPVLIRLLR-DLLRALTHLHRLGVCHADLKPDNLVL-SHTGSLAVIDFGCALRLSP 621
            VLG G +G+V  ARC   +D  ++ A+K +       N+       ELDI+  L  HPNVV+    F  E+ E          R++    +EH R        +V+E+ P TV   +++  +  + P+PF +LI+L    + RAL +LH LG+CH D+KP NL++ S T  L + DFG A RL P
Sbjct:   53 VLGNGSFGVVTEARC---LDTGEVVAIKKVLQDPRYKNR-------ELDIMKELK-HPNVVKLMDYFYTEMGE----------RDS----NEHNRFLN-----VVMEHIPETVYRVMKT-FVRSNQPMPF-ILIKLYTYQMCRALGYLHALGICHRDIKPQNLLVDSRTHVLKLCDFGSAKRLVP 205          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig70699.16878.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1X7VTV8_AMPQE2.960e-3628.19Protein kinase domain-containing protein n=2 Tax=A... [more]
A0A1A9W183_9MUSC1.770e-2127.95Protein kinase domain-containing protein n=1 Tax=G... [more]
UPI001470FD0D8.740e-2133.20serine/threonine-protein kinase PINK1, mitochondri... [more]
A0A2P6VGZ7_9CHLO8.780e-1729.60Wee1 kinase isoform A n=2 Tax=Micractinium conduct... [more]
A0A1I7RQ13_BURXY2.880e-1626.32(pine wood nematode) hypothetical protein n=1 Tax=... [more]
A0A7M7K430_VARDE6.600e-1630.15Protein kinase domain-containing protein n=2 Tax=V... [more]
A0A2P6U3R9_CHLSO2.000e-1529.25Wee1 kinase n=1 Tax=Chlorella sorokiniana TaxID=30... [more]
E1ZQ29_CHLVA5.600e-1527.06Protein kinase domain-containing protein n=1 Tax=C... [more]
U6MDQ7_9EIME1.180e-1433.69CMGC kinase, GSK family TgPK3, putative n=1 Tax=Ei... [more]
A0A2C6KHS2_9APIC6.890e-1435.14Cell-cycle-associated protein kinase gsk n=1 Tax=C... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig70699contigM-pyrifera_M_contig70699:167..1171 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score186.0
Seed ortholog evalue2.8e-44
Seed eggNOG ortholog27923.ML13144a-PA
Hectar predicted targeting categoryother localisation
EggNOG free text desc.MAP kinase kinase kinase activity
EggNOG OGsKOG0198@1,KOG0198@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons1
Model size1005
Cds size1002
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816600.5518382-CDS-M-pyrifera_M_contig70699:166..11681622816600.5518382-CDS-M-pyrifera_M_contig70699:166..1168Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig70699 167..1168 -
1692278070.3742573-CDS-M-pyrifera_M_contig70699:166..11681692278070.3742573-CDS-M-pyrifera_M_contig70699:166..1168Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig70699 167..1168 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816600.5692036-UTR-M-pyrifera_M_contig70699:1168..11711622816600.5692036-UTR-M-pyrifera_M_contig70699:1168..1171Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig70699 1169..1171 -
1692278070.3852046-UTR-M-pyrifera_M_contig70699:1168..11711692278070.3852046-UTR-M-pyrifera_M_contig70699:1168..1171Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig70699 1169..1171 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig70699.16878.1prot_M-pyrifera_M_contig70699.16878.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig70699 167..1168 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig70699.16878.1

>prot_M-pyrifera_M_contig70699.16878.1 ID=prot_M-pyrifera_M_contig70699.16878.1|Name=mRNA_M-pyrifera_M_contig70699.16878.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=334bp
MSKDMLELQRIGTARAESFVDPEVLGVGQYGMVFRARCARAIDVRKLYAV
KLIFNYGLATNQVRNSYDNELDILSHLPPHPNVVRYWGQFVDEVPEWAIS
LLPAVPREAATYTDEHGRTRRRKAQFLVIEYYPVTVRVWLRSRHISRSNP
LPFPVLIRLLRDLLRALTHLHRLGVCHADLKPDNLVLSHTGSLAVIDFGC
ALRLSPPLLELSFNPHAIAGGNAMHLAPEVHNAFERGRAKAARGEPPEEC
VSYLHQSVWAAGALAHELATNTHPLPDWPVGHGSMGNHHYDTADLPPLPA
DYPERFRSLVDHMLEPRPADRCSIEEALEAMQSL
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mRNA from alignment at M-pyrifera_M_contig70699:167..1171-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig70699.16878.1 ID=mRNA_M-pyrifera_M_contig70699.16878.1|Name=mRNA_M-pyrifera_M_contig70699.16878.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1005bp|location=Sequence derived from alignment at M-pyrifera_M_contig70699:167..1171- (Macrocystis pyrifera P11B4 male)
GACATGAGCAAGGACATGCTGGAGCTGCAGCGTATTGGCACCGCTCGTGC CGAGAGTTTCGTGGATCCAGAGGTGCTGGGTGTGGGGCAGTACGGGATGG TGTTCCGGGCCCGCTGCGCACGTGCGATCGACGTGCGCAAGCTGTATGCG GTCAAGCTCATTTTCAACTACGGCTTGGCCACCAACCAAGTGCGAAATTC CTACGACAACGAACTCGACATCCTCTCGCACCTCCCGCCCCACCCGAACG TGGTCCGGTATTGGGGGCAATTCGTGGACGAGGTGCCAGAATGGGCCATT TCGCTGCTCCCAGCTGTGCCTCGTGAAGCCGCAACATACACGGATGAGCA CGGACGCACGAGGCGACGCAAAGCCCAGTTTCTGGTGATCGAGTACTATC CCGTCACGGTTCGCGTTTGGCTTCGATCGCGGCACATTTCCAGATCCAAC CCTTTGCCATTTCCAGTGCTCATTCGCCTCCTCCGCGACCTGTTGCGTGC TCTGACTCATTTGCACCGGTTGGGAGTGTGTCACGCTGATCTCAAACCCG ACAACTTGGTGCTCAGCCACACCGGCTCTCTGGCCGTGATCGACTTTGGC TGTGCTCTGCGTCTGTCCCCTCCACTGCTCGAGCTCTCCTTCAACCCCCA CGCCATTGCTGGGGGCAACGCGATGCACCTGGCGCCTGAAGTCCACAACG CCTTTGAGCGAGGGAGGGCCAAAGCCGCGAGAGGAGAACCTCCAGAGGAG TGTGTCAGCTACCTGCACCAGAGCGTGTGGGCAGCAGGAGCGCTTGCCCA TGAACTGGCCACCAACACACACCCTCTCCCCGACTGGCCGGTGGGGCACG GCTCCATGGGCAACCACCACTACGACACGGCCGACCTCCCTCCACTCCCA GCCGACTACCCCGAGCGATTTCGTTCTCTCGTGGACCACATGCTGGAACC CCGACCAGCTGACCGCTGCTCCATCGAAGAGGCTCTGGAAGCCATGCAGA GCCTC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig70699:167..1171-

>mRNA_M-pyrifera_M_contig70699.16878.1 ID=mRNA_M-pyrifera_M_contig70699.16878.1|Name=mRNA_M-pyrifera_M_contig70699.16878.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2004bp|location=Sequence derived from alignment at M-pyrifera_M_contig70699:167..1171- (Macrocystis pyrifera P11B4 male)
ATGAGCAAGGACATGCTGGAGCTGCAGCGTATTGGCACCGCTCGTGCCGA
GAGTTTCGTGGATCCAGAGGTGCTGGGTGTGGGGCAGTACGGGATGGTGT
TCCGGGCCCGCTGCGCACGTGCGATCGACGTGCGCAAGCTGTATGCGGTC
AAGCTCATTTTCAACTACGGCTTGGCCACCAACCAAGTGCGAAATTCCTA
CGACAACGAACTCGACATCCTCTCGCACCTCCCGCCCCACCCGAACGTGG
TCCGGTATTGGGGGCAATTCGTGGACGAGGTGCCAGAATGGGCCATTTCG
CTGCTCCCAGCTGTGCCTCGTGAAGCCGCAACATACACGGATGAGCACGG
ACGCACGAGGCGACGCAAAGCCCAGTTTCTGGTGATCGAGTACTATCCCG
TCACGGTTCGCGTTTGGCTTCGATCGCGGCACATTTCCAGATCCAACCCT
TTGCCATTTCCAGTGCTCATTCGCCTCCTCCGCGACCTGTTGCGTGCTCT
GACTCATTTGCACCGGTTGGGAGTGTGTCACGCTGATCTCAAACCCGACA
ACTTGGTGCTCAGCCACACCGGCTCTCTGGCCGTGATCGACTTTGGCTGT
GCTCTGCGTCTGTCCCCTCCACTGCTCGAGCTCTCCTTCAACCCCCACGC
CATTGCTGGGGGCAACGCGATGCACCTGGCGCCTGAAGTCCACAACGCCT
TTGAGCGAGGGAGGGCCAAAGCCGCGAGAGGAGAACCTCCAGAGGAGTGT
GTCAGCTACCTGCACCAGAGCGTGTGGGCAGCAGGAGCGCTTGCCCATGA
ACTGGCCACCAACACACACCCTCTCCCCGACTGGCCGGTGGGGCACGGCT
CCATGGGCAACCACCACTACGACACGGCCGACCTCCCTCCACTCCCAGCC
GACTACCCCGAGCGATTTCGTTCTCTCGTGGACCACATGCTGGAACCCCG
ACCAGCTGACCGCTGCTCCATCGAAGAGGCTCTGGAAGCCATGCAGAGCC
TCATGAGCAAGGACATGCTGGAGCTGCAGCGTATTGGCACCGCTCGTGCC
GAGAGTTTCGTGGATCCAGAGGTGCTGGGTGTGGGGCAGTACGGGATGGT
GTTCCGGGCCCGCTGCGCACGTGCGATCGACGTGCGCAAGCTGTATGCGG
TCAAGCTCATTTTCAACTACGGCTTGGCCACCAACCAAGTGCGAAATTCC
TACGACAACGAACTCGACATCCTCTCGCACCTCCCGCCCCACCCGAACGT
GGTCCGGTATTGGGGGCAATTCGTGGACGAGGTGCCAGAATGGGCCATTT
CGCTGCTCCCAGCTGTGCCTCGTGAAGCCGCAACATACACGGATGAGCAC
GGACGCACGAGGCGACGCAAAGCCCAGTTTCTGGTGATCGAGTACTATCC
CGTCACGGTTCGCGTTTGGCTTCGATCGCGGCACATTTCCAGATCCAACC
CTTTGCCATTTCCAGTGCTCATTCGCCTCCTCCGCGACCTGTTGCGTGCT
CTGACTCATTTGCACCGGTTGGGAGTGTGTCACGCTGATCTCAAACCCGA
CAACTTGGTGCTCAGCCACACCGGCTCTCTGGCCGTGATCGACTTTGGCT
GTGCTCTGCGTCTGTCCCCTCCACTGCTCGAGCTCTCCTTCAACCCCCAC
GCCATTGCTGGGGGCAACGCGATGCACCTGGCGCCTGAAGTCCACAACGC
CTTTGAGCGAGGGAGGGCCAAAGCCGCGAGAGGAGAACCTCCAGAGGAGT
GTGTCAGCTACCTGCACCAGAGCGTGTGGGCAGCAGGAGCGCTTGCCCAT
GAACTGGCCACCAACACACACCCTCTCCCCGACTGGCCGGTGGGGCACGG
CTCCATGGGCAACCACCACTACGACACGGCCGACCTCCCTCCACTCCCAG
CCGACTACCCCGAGCGATTTCGTTCTCTCGTGGACCACATGCTGGAACCC
CGACCAGCTGACCGCTGCTCCATCGAAGAGGCTCTGGAAGCCATGCAGAG
CCTC
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