mRNA_M-pyrifera_M_contig70684.16873.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_M-pyrifera_M_contig70684.16873.1
Unique Name	mRNA_M-pyrifera_M_contig70684.16873.1
Type	mRNA
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))

Homology

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BLAST of mRNA_M-pyrifera_M_contig70684.16873.1 vs. uniprot
Match: TBB_EUPCR (Tubulin beta chain n=90 Tax=Sar TaxID=2698737 RepID=TBB_EUPCR)

HSP 1 Score: 734 bits (1894), Expect = 8.220e-266
Identity = 360/386 (93.26%), Postives = 376/386 (97.41%), Query Frame = 1

Query:    1 PRAVLMDLEPGTMASVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQITHSMGGGTGSGMGTLLISKIREEYPDRMMVTFSVFPSPKVSDTVVEPYNATLSVHQLVENADEVIVLDNEALYDICFRTLKLTTPTYGDLNHLITAAISGVTCCLRFPGQLNADLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTAACMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSVCDIPPKGLKMASTFIGNTTAIQEMFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEDEEDFDDM 1158
            PRAVLMDLEPGTM SVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAE CDCLQGFQITHS+GGGTGSGMGTLLISKIREEYPDR+M TFSVFPSPKVSDTVVEPYNATLSVHQLVENADEV+V+DNEALYDICFRTLKLTTPTYGDLNHL++A ISGVT CLRFPGQLN+DLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ FDAKNMMCA+DPRHGRYLTA+ MFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSVCDIPPKGLK+ASTFIGN+TAIQEMFKR++EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGE+ EDE++ D M
Sbjct:   61 PRAVLMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAEGCDCLQGFQITHSLGGGTGSGMGTLLISKIREEYPDRIMETFSVFPSPKVSDTVVEPYNATLSVHQLVENADEVMVIDNEALYDICFRTLKLTTPTYGDLNHLVSACISGVTSCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMCASDPRHGRYLTASAMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSVCDIPPKGLKLASTFIGNSTAIQEMFKRVAEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEYVEDEDEMDGM 446

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BLAST of mRNA_M-pyrifera_M_contig70684.16873.1 vs. uniprot
Match: A0A7R7EX50_9STRA (Tubulin beta chain (Fragment) n=2 Tax=Oomycota TaxID=4762 RepID=A0A7R7EX50_9STRA)

HSP 1 Score: 733 bits (1892), Expect = 8.790e-266
Identity = 356/379 (93.93%), Postives = 372/379 (98.15%), Query Frame = 1

Query:    1 PRAVLMDLEPGTMASVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQITHSMGGGTGSGMGTLLISKIREEYPDRMMVTFSVFPSPKVSDTVVEPYNATLSVHQLVENADEVIVLDNEALYDICFRTLKLTTPTYGDLNHLITAAISGVTCCLRFPGQLNADLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTAACMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSVCDIPPKGLKMASTFIGNTTAIQEMFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDED 1137
            PRA+LMDLEPGTM SVRAGP+GQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQITHS+GGGTGSGMGTLLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DEV+ LDNEALYDICFRTLKLTTPTYGDLNHL+ AA+SG+T CLRFPGQLN+DLRKLAVNLIPFPRLHFFM+GFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTAACMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIK+SVCDIPPKGLKM++TFIGN+TAIQEMFKR+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDED
Sbjct:   51 PRAILMDLEPGTMDSVRAGPYGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQITHSLGGGTGSGMGTLLISKIREEYPDRIMCTYSVCPSPKVSDTVVEPYNATLSVHQLVENTDEVMYLDNEALYDICFRTLKLTTPTYGDLNHLVCAAMSGITTCLRFPGQLNSDLRKLAVNLIPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTAACMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKASVCDIPPKGLKMSTTFIGNSTAIQEMFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDED 429

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BLAST of mRNA_M-pyrifera_M_contig70684.16873.1 vs. uniprot
Match: E9RES4_GLOSP (Tubulin beta chain (Fragment) n=2 Tax=Globisporangium TaxID=1448052 RepID=E9RES4_GLOSP)

HSP 1 Score: 733 bits (1891), Expect = 1.250e-265
Identity = 356/379 (93.93%), Postives = 372/379 (98.15%), Query Frame = 1

Query:    1 PRAVLMDLEPGTMASVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQITHSMGGGTGSGMGTLLISKIREEYPDRMMVTFSVFPSPKVSDTVVEPYNATLSVHQLVENADEVIVLDNEALYDICFRTLKLTTPTYGDLNHLITAAISGVTCCLRFPGQLNADLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTAACMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSVCDIPPKGLKMASTFIGNTTAIQEMFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDED 1137
            PRA+LMDLEPGTM SVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQITHS+GGGTGSGMGTLLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVENADEV+ LDNEALYDICFRTLKLTTPTY DLNHL+ AA+SG+T CLRFPGQLN+DLRKLAVNLIPFPRLHFFM+GFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTAACMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIK+SVCDIPPKGLKM++TF+GN+TAIQEMFKR+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDED
Sbjct:   51 PRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQITHSLGGGTGSGMGTLLISKIREEYPDRIMCTYSVCPSPKVSDTVVEPYNATLSVHQLVENADEVMCLDNEALYDICFRTLKLTTPTYXDLNHLVCAAMSGITTCLRFPGQLNSDLRKLAVNLIPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTAACMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKASVCDIPPKGLKMSTTFVGNSTAIQEMFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDED 429

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BLAST of mRNA_M-pyrifera_M_contig70684.16873.1 vs. uniprot
Match: A0A7R7EX04_9STRA (Tubulin beta chain (Fragment) n=2 Tax=Phytophthora TaxID=4783 RepID=A0A7R7EX04_9STRA)

HSP 1 Score: 732 bits (1890), Expect = 1.770e-265
Identity = 356/379 (93.93%), Postives = 372/379 (98.15%), Query Frame = 1

Query:    1 PRAVLMDLEPGTMASVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQITHSMGGGTGSGMGTLLISKIREEYPDRMMVTFSVFPSPKVSDTVVEPYNATLSVHQLVENADEVIVLDNEALYDICFRTLKLTTPTYGDLNHLITAAISGVTCCLRFPGQLNADLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTAACMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSVCDIPPKGLKMASTFIGNTTAIQEMFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDED 1137
            PRA+LMDLEPGTM SVRAGP+GQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQITHS+GGGTGSGMGTLLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVENADEV+ LDNEALYDICFRTLKLTTPTYGDLNHL+ AA+SG+T CLRFPGQLN+DLRKLAVNLIPFPRLH FM+GFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTAACMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIK+SVCDIPPKGLKM++TFIGN+TAIQEMFKR+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDED
Sbjct:   51 PRAILMDLEPGTMDSVRAGPYGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQITHSLGGGTGSGMGTLLISKIREEYPDRIMCTYSVCPSPKVSDTVVEPYNATLSVHQLVENADEVMCLDNEALYDICFRTLKLTTPTYGDLNHLVCAAMSGITTCLRFPGQLNSDLRKLAVNLIPFPRLHLFMIGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTAACMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKASVCDIPPKGLKMSTTFIGNSTAIQEMFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDED 429

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BLAST of mRNA_M-pyrifera_M_contig70684.16873.1 vs. uniprot
Match: A0A7R7IIP2_9STRA (Tubulin beta chain (Fragment) n=1 Tax=Phytophthora multivesiculata TaxID=129357 RepID=A0A7R7IIP2_9STRA)

HSP 1 Score: 731 bits (1886), Expect = 7.220e-265
Identity = 355/379 (93.67%), Postives = 372/379 (98.15%), Query Frame = 1

Query:    1 PRAVLMDLEPGTMASVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQITHSMGGGTGSGMGTLLISKIREEYPDRMMVTFSVFPSPKVSDTVVEPYNATLSVHQLVENADEVIVLDNEALYDICFRTLKLTTPTYGDLNHLITAAISGVTCCLRFPGQLNADLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTAACMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSVCDIPPKGLKMASTFIGNTTAIQEMFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDED 1137
            PRA+LMDLEPGTM SVRAGP+GQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQITHS+GGGTGSGMGTLLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVENADEV+ LDNEALYDICFRTLKLTTPTYGDLNHL+ AA+SG+T CLRFPGQLN+DLRKLAVNLIPFPRLHFFM+GFAPLTSRGSQQYRALTVPELTQQQFDAKNM+CAADPRHGRYLTAACMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIK+SVCDIPPKGLKM++TFIGN+TAIQEMFKR+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY DATAEEEGEFDED
Sbjct:   51 PRAILMDLEPGTMDSVRAGPYGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQITHSLGGGTGSGMGTLLISKIREEYPDRIMCTYSVCPSPKVSDTVVEPYNATLSVHQLVENADEVMCLDNEALYDICFRTLKLTTPTYGDLNHLVCAAMSGITTCLRFPGQLNSDLRKLAVNLIPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQQFDAKNMLCAADPRHGRYLTAACMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKASVCDIPPKGLKMSTTFIGNSTAIQEMFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYLDATAEEEGEFDED 429

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BLAST of mRNA_M-pyrifera_M_contig70684.16873.1 vs. uniprot
Match: TBB_TETTH (Tubulin beta chain n=61 Tax=Alveolata TaxID=33630 RepID=TBB_TETTH)

HSP 1 Score: 729 bits (1881), Expect = 7.030e-264
Identity = 352/380 (92.63%), Postives = 372/380 (97.89%), Query Frame = 1

Query:    1 PRAVLMDLEPGTMASVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQITHSMGGGTGSGMGTLLISKIREEYPDRMMVTFSVFPSPKVSDTVVEPYNATLSVHQLVENADEVIVLDNEALYDICFRTLKLTTPTYGDLNHLITAAISGVTCCLRFPGQLNADLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTAACMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSVCDIPPKGLKMASTFIGNTTAIQEMFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEDE 1140
            PRA+LMDLEPGTM SVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAE CDCLQGFQITHS+GGGTGSGMGTLLISK+REEYPDR+M TFSV PSPKVSDTVVEPYNATLSVHQLVENADE +V+DNEALYDICFRTLKLTTPTYGDLNHL++AA+SGVTCCLRFPGQLN+DLRKLAVNLIPFPRLHFFM+GFAPLTSRGSQQYRALTVPELTQQ FDAKNMMCAADPRHGRYLTA+ +FRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSS+CDIPPKGLKMA TF+GN+TAIQEMFKR++EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEF+E+E
Sbjct:   61 PRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAEGCDCLQGFQITHSLGGGTGSGMGTLLISKVREEYPDRIMETFSVVPSPKVSDTVVEPYNATLSVHQLVENADECMVIDNEALYDICFRTLKLTTPTYGDLNHLVSAAMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMCAADPRHGRYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSICDIPPKGLKMAVTFVGNSTAIQEMFKRVAEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFEEEE 440

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BLAST of mRNA_M-pyrifera_M_contig70684.16873.1 vs. uniprot
Match: TBB_NAEPR (Tubulin beta chain n=1379 Tax=cellular organisms TaxID=131567 RepID=TBB_NAEPR)

HSP 1 Score: 726 bits (1873), Expect = 1.570e-262
Identity = 351/380 (92.37%), Postives = 372/380 (97.89%), Query Frame = 1

Query:    1 PRAVLMDLEPGTMASVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQITHSMGGGTGSGMGTLLISKIREEYPDRMMVTFSVFPSPKVSDTVVEPYNATLSVHQLVENADEVIVLDNEALYDICFRTLKLTTPTYGDLNHLITAAISGVTCCLRFPGQLNADLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTAACMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSVCDIPPKGLKMASTFIGNTTAIQEMFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEDE 1140
            PRA+LMDLEPGTM SVRAGP+GQ+FRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQI HS+GGGTGSGMGTLLISKIREEYPDRMM+TFSVFPSPKVSDTVVEPYNATLSVHQLVENADEV+ +DNEALYDICFRTLKLTTPT+GDLNHL++  +SGVTCCLRFPGQLN+DLRKLAVNLIPFPRLHFF++GFAPLTSRGSQQYRALTVPELTQQ FDAKNMM A+DPRHGRYLTA+ MFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSVCDIPP+GLKMA+TFIGN+TAIQEMFKR+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDE+E
Sbjct:   61 PRAILMDLEPGTMDSVRAGPYGQIFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQIAHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADEVMCIDNEALYDICFRTLKLTTPTFGDLNHLVSIVMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFLIGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAASDPRHGRYLTASAMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSVCDIPPRGLKMAATFIGNSTAIQEMFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDENE 440

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BLAST of mRNA_M-pyrifera_M_contig70684.16873.1 vs. uniprot
Match: TBB1_CYAPA (Tubulin beta-1 chain n=29 Tax=Eukaryota TaxID=2759 RepID=TBB1_CYAPA)

HSP 1 Score: 725 bits (1872), Expect = 1.920e-262
Identity = 349/375 (93.07%), Postives = 368/375 (98.13%), Query Frame = 1

Query:    1 PRAVLMDLEPGTMASVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQITHSMGGGTGSGMGTLLISKIREEYPDRMMVTFSVFPSPKVSDTVVEPYNATLSVHQLVENADEVIVLDNEALYDICFRTLKLTTPTYGDLNHLITAAISGVTCCLRFPGQLNADLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTAACMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSVCDIPPKGLKMASTFIGNTTAIQEMFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGE 1125
            PRAVLMDLEPGTM SVRAGP+GQLFRPDNF+FGQ+GAGNNWAKGHYTEGAELIDSVLDVVRKEAE CDCLQGFQITHSMGGGTGSGMGTLLI+K+REEYPDRMM T+SVFPSPKVSDTVVEPYNATLSVHQLVENADEV+V+DNEALYDICFRTLKLTTPTYGDLNHL++A ISGVTCCLRFPGQLN+DLRKLAVNLIPFPRLHFFM+GF PLTSRGSQQYRALTVPELTQQ FDAKNMMCAADPRHGRYLTA+ +FRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIK+SVCDIPPKGLKM++TFIGN+TAIQEMFKR+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGE
Sbjct:   61 PRAVLMDLEPGTMDSVRAGPYGQLFRPDNFIFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEGCDCLQGFQITHSMGGGTGSGMGTLLIAKVREEYPDRMMCTYSVFPSPKVSDTVVEPYNATLSVHQLVENADEVMVIDNEALYDICFRTLKLTTPTYGDLNHLVSACISGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMIGFVPLTSRGSQQYRALTVPELTQQMFDAKNMMCAADPRHGRYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKASVCDIPPKGLKMSATFIGNSTAIQEMFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGE 435

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BLAST of mRNA_M-pyrifera_M_contig70684.16873.1 vs. uniprot
Match: B1B3R7_SORST (Tubulin beta chain (Fragment) n=1 Tax=Sorogena stoianovitchae TaxID=164621 RepID=B1B3R7_SORST)

HSP 1 Score: 724 bits (1870), Expect = 2.210e-262
Identity = 354/380 (93.16%), Postives = 370/380 (97.37%), Query Frame = 1

Query:    1 PRAVLMDLEPGTMASVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQITHSMGGGTGSGMGTLLISKIREEYPDRMMVTFSVFPSPKVSDTVVEPYNATLSVHQLVENADEVIVLDNEALYDICFRTLKLTTPTYGDLNHLITAAISGVTCCLRFPGQLNADLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTAACMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSVCDIPPKGLKMASTFIGNTTAIQEMFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEDE 1140
            PRA+LMDLEPGTM SVRAGPFGQLFRPDNFVFGQ+GAGNNWAKGHYTEGAELIDSVLDVVRKEAE CDCLQGFQITHS+GGGTGSGMGTLLISK+REEYPDR+M TFSVFPSPKVSDTVVEPYNATLSVHQLVENADEV V+DNEALYDICFRTLKLTTP YGDLNHL++AA+SGVTCCLRFPGQLN+DLRKLAVNLIPFPRL FFMVGFAPLTSRGS QYRALTVPELTQQ FDAKNMMCA+DPRHGRYLTAA MFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSS+CDIPPKGLKMA TFIGN+TAIQEMFKR++EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDE+E
Sbjct:   51 PRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEGCDCLQGFQITHSLGGGTGSGMGTLLISKVREEYPDRIMETFSVFPSPKVSDTVVEPYNATLSVHQLVENADEVQVIDNEALYDICFRTLKLTTPPYGDLNHLVSAAMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLLFFMVGFAPLTSRGSLQYRALTVPELTQQMFDAKNMMCASDPRHGRYLTAAAMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSICDIPPKGLKMAVTFIGNSTAIQEMFKRVAEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEEE 430

[Close]

BLAST of mRNA_M-pyrifera_M_contig70684.16873.1 vs. uniprot
Match: TBB_PLAF7 (Tubulin beta chain n=187 Tax=Eukaryota TaxID=2759 RepID=TBB_PLAF7)

HSP 1 Score: 723 bits (1867), Expect = 1.030e-261
Identity = 352/380 (92.63%), Postives = 370/380 (97.37%), Query Frame = 1

Query:    1 PRAVLMDLEPGTMASVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQITHSMGGGTGSGMGTLLISKIREEYPDRMMVTFSVFPSPKVSDTVVEPYNATLSVHQLVENADEVIVLDNEALYDICFRTLKLTTPTYGDLNHLITAAISGVTCCLRFPGQLNADLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTAACMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSVCDIPPKGLKMASTFIGNTTAIQEMFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEDE 1140
            PRA+LMDLEPGTM SVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELID+VLDVVRKEAE CDCLQGFQITHS+GGGTGSGMGTLLISKIREEYPDR+M TFSVFPSPKVSDTVVEPYNATLSVHQLVENADEV V+DNEALYDICFRTLKLTTPTYGDLNHL++AA+SGVTC LRFPGQLN+DLRKLAVNLIPFPRLHFFM+GFAPLTSRGSQQYRALTVPELTQQ FDAKNMMCA+DPRHGRYLTA  MFRGRMSTKEVDEQMLNVQNKNSSYFVEWIP+N KSSVCDIPPKGLKMA TF+GN+TAIQEMFKR+S+QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEF+E+E
Sbjct:   61 PRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDAVLDVVRKEAEGCDCLQGFQITHSLGGGTGSGMGTLLISKIREEYPDRIMETFSVFPSPKVSDTVVEPYNATLSVHQLVENADEVQVIDNEALYDICFRTLKLTTPTYGDLNHLVSAAMSGVTCSLRFPGQLNSDLRKLAVNLIPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMCASDPRHGRYLTACAMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPHNTKSSVCDIPPKGLKMAVTFVGNSTAIQEMFKRVSDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFEEEE 440

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig70684.16873.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig70684.16873.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
TBB_EUPCR	8.220e-266	93.26	Tubulin beta chain n=90 Tax=Sar TaxID=2698737 RepI...	[more]
A0A7R7EX50_9STRA	8.790e-266	93.93	Tubulin beta chain (Fragment) n=2 Tax=Oomycota Tax...	[more]
E9RES4_GLOSP	1.250e-265	93.93	Tubulin beta chain (Fragment) n=2 Tax=Globisporang...	[more]
A0A7R7EX04_9STRA	1.770e-265	93.93	Tubulin beta chain (Fragment) n=2 Tax=Phytophthora...	[more]
A0A7R7IIP2_9STRA	7.220e-265	93.67	Tubulin beta chain (Fragment) n=1 Tax=Phytophthora...	[more]
TBB_TETTH	7.030e-264	92.63	Tubulin beta chain n=61 Tax=Alveolata TaxID=33630 ...	[more]
TBB_NAEPR	1.570e-262	92.37	Tubulin beta chain n=1379 Tax=cellular organisms T...	[more]
TBB1_CYAPA	1.920e-262	93.07	Tubulin beta-1 chain n=29 Tax=Eukaryota TaxID=2759...	[more]
B1B3R7_SORST	2.210e-262	93.16	Tubulin beta chain (Fragment) n=1 Tax=Sorogena sto...	[more]
TBB_PLAF7	1.030e-261	92.63	Tubulin beta chain n=187 Tax=Eukaryota TaxID=2759 ...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig70684	contig	M-pyrifera_M_contig70684:1..1172 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	731.9
Seed ortholog evalue	1.6e-208
Seed eggNOG ortholog	65071.PYU1_T014620
KEGG ko	ko:K07375
KEGG Pathway	ko04145,ko04540,ko05130,map04145,map04540,map05130
Hectar predicted targeting category	other localisation
GOs	GO:0005575,GO:0005622,GO:0005623,GO:0005856,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044424,GO:0044464
EggNOG free text desc.	Beta-tubulin. Source PGD
EggNOG OGs	1MCQ3@121069,COG5023@1,KOG1375@2759
COG Functional cat.	Z
Best tax level	Pythiales
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko03036,ko04147,ko04812
Exons	1
Model size	1172
Cds size	1146
Stop	1
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig70684.16873.1	prot_M-pyrifera_M_contig70684.16873.1	Macrocystis pyrifera P11B4 male	polypeptide	M-pyrifera_M_contig70684 16..1161 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622816600.288093-UTR-M-pyrifera_M_contig70684:0..15	1622816600.288093-UTR-M-pyrifera_M_contig70684:0..15	Macrocystis pyrifera P11B4 male	UTR	M-pyrifera_M_contig70684 1..15 +
1692278070.2521827-UTR-M-pyrifera_M_contig70684:0..15	1692278070.2521827-UTR-M-pyrifera_M_contig70684:0..15	Macrocystis pyrifera P11B4 male	UTR	M-pyrifera_M_contig70684 1..15 +
1622816600.3231442-UTR-M-pyrifera_M_contig70684:1161..1172	1622816600.3231442-UTR-M-pyrifera_M_contig70684:1161..1172	Macrocystis pyrifera P11B4 male	UTR	M-pyrifera_M_contig70684 1162..1172 +
1692278070.280805-UTR-M-pyrifera_M_contig70684:1161..1172	1692278070.280805-UTR-M-pyrifera_M_contig70684:1161..1172	Macrocystis pyrifera P11B4 male	UTR	M-pyrifera_M_contig70684 1162..1172 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622816600.3071048-CDS-M-pyrifera_M_contig70684:15..1161	1622816600.3071048-CDS-M-pyrifera_M_contig70684:15..1161	Macrocystis pyrifera P11B4 male	CDS	M-pyrifera_M_contig70684 16..1161 +
1692278070.2723844-CDS-M-pyrifera_M_contig70684:15..1161	1692278070.2723844-CDS-M-pyrifera_M_contig70684:15..1161	Macrocystis pyrifera P11B4 male	CDS	M-pyrifera_M_contig70684 16..1161 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at M-pyrifera_M_contig70684:1..1172+
coding sequence from alignment at M-pyrifera_M_contig70684:1..1172+

protein sequence of mRNA_M-pyrifera_M_contig70684.16873.1

>prot_M-pyrifera_M_contig70684.16873.1 ID=prot_M-pyrifera_M_contig70684.16873.1|Name=mRNA_M-pyrifera_M_contig70684.16873.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=382bp
MDLEPGTMASVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDS
VLDVVRKEAESCDCLQGFQITHSMGGGTGSGMGTLLISKIREEYPDRMMV
TFSVFPSPKVSDTVVEPYNATLSVHQLVENADEVIVLDNEALYDICFRTL
KLTTPTYGDLNHLITAAISGVTCCLRFPGQLNADLRKLAVNLIPFPRLHF
FMVGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTAAC
MFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSVCDIPPKGLKMAS
TFIGNTTAIQEMFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM
NDLVSEYQQYQDATAEEEGEFDEDEEDFDDM*

mRNA from alignment at M-pyrifera_M_contig70684:1..1172+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_M-pyrifera_M_contig70684.16873.1 ID=mRNA_M-pyrifera_M_contig70684.16873.1|Name=mRNA_M-pyrifera_M_contig70684.16873.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1172bp|location=Sequence derived from alignment at M-pyrifera_M_contig70684:1..1172+ (Macrocystis pyrifera P11B4 male)
CCCCGCGCGGTGCTCATGGACCTGGAGCCGGGCACCATGGCCTCCGTGCG
CGCGGGTCCGTTCGGCCAGCTCTTCCGCCCGGACAACTTCGTGTTCGGCC
AGACCGGTGCCGGCAACAACTGGGCCAAGGGCCACTACACCGAGGGTGCC
GAGCTGATCGACTCCGTGCTGGACGTCGTCCGCAAGGAGGCCGAGTCGTG
CGACTGCCTGCAGGGCTTCCAGATCACCCACTCCATGGGTGGCGGCACTG
GCTCTGGCATGGGCACTCTGCTCATCAGCAAGATCCGCGAGGAGTACCCG
GACCGCATGATGGTCACCTTCTCCGTCTTCCCGTCCCCTAAGGTGTCCGA
CACCGTGGTGGAGCCGTACAACGCCACCCTGTCCGTCCACCAGCTGGTGG
AGAACGCCGACGAGGTGATCGTGCTGGATAACGAGGCTCTGTACGACATC
TGCTTCCGTACCCTCAAGCTCACCACGCCCACGTACGGTGACCTGAACCA
CCTCATCACCGCCGCCATCTCCGGCGTCACCTGCTGCCTGCGCTTCCCGG
GTCAGCTCAACGCCGACCTGCGCAAGCTGGCCGTCAACCTCATCCCGTTC
CCGCGTCTGCACTTCTTCATGGTCGGCTTCGCGCCGCTCACCAGCCGCGG
CTCGCAGCAGTACCGCGCGCTGACGGTGCCGGAGCTGACCCAGCAGCAGT
TCGACGCCAAGAACATGATGTGCGCCGCCGACCCGCGCCACGGCCGCTAC
CTCACCGCCGCCTGCATGTTCCGCGGCCGCATGTCCACCAAGGAGGTTGA
CGAGCAGATGCTGAACGTCCAGAACAAGAACTCGTCCTACTTCGTGGAGT
GGATCCCGAACAACATCAAGTCGTCCGTCTGCGACATCCCGCCCAAGGGC
CTCAAGATGGCGTCCACCTTCATCGGCAACACCACCGCCATCCAGGAGAT
GTTCAAGCGCATCTCTGAGCAGTTCACTGCCATGTTCCGCCGCAAGGCTT
TCCTCCACTGGTACACCGGTGAGGGCATGGACGAGATGGAGTTCACGGAG
GCCGAGTCCAACATGAACGATCTCGTGTCCGAGTACCAGCAGTACCAGGA
CGCCACCGCCGAGGAGGAGGGCGAGTTCGACGAGGACGAGGAGGACTTTG
ACGACATGTGAGCACGCGCTGT

Coding sequence (CDS) from alignment at M-pyrifera_M_contig70684:1..1172+

>mRNA_M-pyrifera_M_contig70684.16873.1 ID=mRNA_M-pyrifera_M_contig70684.16873.1|Name=mRNA_M-pyrifera_M_contig70684.16873.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2292bp|location=Sequence derived from alignment at M-pyrifera_M_contig70684:1..1172+ (Macrocystis pyrifera P11B4 male)
ATGGACCTGGAGCCGGGCACCATGGCCTCCGTGCGCGCGGGTCCGTTCGG
CCAGCTCTTCCGCCCGGACAACTTCGTGTTCGGCCAGACCGGTGCCGGCA
ACAACTGGGCCAAGGGCCACTACACCGAGGGTGCCGAGCTGATCGACTCC
GTGCTGGACGTCGTCCGCAAGGAGGCCGAGTCGTGCGACTGCCTGCAGGG
CTTCCAGATCACCCACTCCATGGGTGGCGGCACTGGCTCTGGCATGGGCA
CTCTGCTCATCAGCAAGATCCGCGAGGAGTACCCGGACCGCATGATGGTC
ACCTTCTCCGTCTTCCCGTCCCCTAAGGTGTCCGACACCGTGGTGGAGCC
GTACAACGCCACCCTGTCCGTCCACCAGCTGGTGGAGAACGCCGACGAGG
TGATCGTGCTGGATAACGAGGCTCTGTACGACATCTGCTTCCGTACCCTC
AAGCTCACCACGCCCACGTACGGTGACCTGAACCACCTCATCACCGCCGC
CATCTCCGGCGTCACCTGCTGCCTGCGCTTCCCGGGTCAGCTCAACGCCG
ACCTGCGCAAGCTGGCCGTCAACCTCATCCCGTTCCCGCGTCTGCACTTC
TTCATGGTCGGCTTCGCGCCGCTCACCAGCCGCGGCTCGCAGCAGTACCG
CGCGCTGACGGTGCCGGAGCTGACCCAGCAGCAGTTCGACGCCAAGAACA
TGATGTGCGCCGCCGACCCGCGCCACGGCCGCTACCTCACCGCCGCCTGC
ATGTTCCGCGGCCGCATGTCCACCAAGGAGGTTGACGAGCAGATGCTGAA
CGTCCAGAACAAGAACTCGTCCTACTTCGTGGAGTGGATCCCGAACAACA
TCAAGTCGTCCGTCTGCGACATCCCGCCCAAGGGCCTCAAGATGGCGTCC
ACCTTCATCGGCAACACCACCGCCATCCAGGAGATGTTCAAGCGCATCTC
TGAGCAGTTCACTGCCATGTTCCGCCGCAAGGCTTTCCTCCACTGGTACA
CCGGTGAGGGCATGGACGAGATGGAGTTCACGGAGGCCGAGTCCAACATG
AACGATCTCGTGTCCGAGTACCAGCAGTACCAGGACGCCACCGCCGAGGA
GGAGGGCGAGTTCGACGAGGACGAGGAGGACTTTGACGACATGTGAATGG
ACCTGGAGCCGGGCACCATGGCCTCCGTGCGCGCGGGTCCGTTCGGCCAG
CTCTTCCGCCCGGACAACTTCGTGTTCGGCCAGACCGGTGCCGGCAACAA
CTGGGCCAAGGGCCACTACACCGAGGGTGCCGAGCTGATCGACTCCGTGC
TGGACGTCGTCCGCAAGGAGGCCGAGTCGTGCGACTGCCTGCAGGGCTTC
CAGATCACCCACTCCATGGGTGGCGGCACTGGCTCTGGCATGGGCACTCT
GCTCATCAGCAAGATCCGCGAGGAGTACCCGGACCGCATGATGGTCACCT
TCTCCGTCTTCCCGTCCCCTAAGGTGTCCGACACCGTGGTGGAGCCGTAC
AACGCCACCCTGTCCGTCCACCAGCTGGTGGAGAACGCCGACGAGGTGAT
CGTGCTGGATAACGAGGCTCTGTACGACATCTGCTTCCGTACCCTCAAGC
TCACCACGCCCACGTACGGTGACCTGAACCACCTCATCACCGCCGCCATC
TCCGGCGTCACCTGCTGCCTGCGCTTCCCGGGTCAGCTCAACGCCGACCT
GCGCAAGCTGGCCGTCAACCTCATCCCGTTCCCGCGTCTGCACTTCTTCA
TGGTCGGCTTCGCGCCGCTCACCAGCCGCGGCTCGCAGCAGTACCGCGCG
CTGACGGTGCCGGAGCTGACCCAGCAGCAGTTCGACGCCAAGAACATGAT
GTGCGCCGCCGACCCGCGCCACGGCCGCTACCTCACCGCCGCCTGCATGT
TCCGCGGCCGCATGTCCACCAAGGAGGTTGACGAGCAGATGCTGAACGTC
CAGAACAAGAACTCGTCCTACTTCGTGGAGTGGATCCCGAACAACATCAA
GTCGTCCGTCTGCGACATCCCGCCCAAGGGCCTCAAGATGGCGTCCACCT
TCATCGGCAACACCACCGCCATCCAGGAGATGTTCAAGCGCATCTCTGAG
CAGTTCACTGCCATGTTCCGCCGCAAGGCTTTCCTCCACTGGTACACCGG
TGAGGGCATGGACGAGATGGAGTTCACGGAGGCCGAGTCCAACATGAACG
ATCTCGTGTCCGAGTACCAGCAGTACCAGGACGCCACCGCCGAGGAGGAG
GGCGAGTTCGACGAGGACGAGGAGGACTTTGACGACATGTGA