mRNA_M-pyrifera_M_contig70652.16865.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig70652.16865.1
Unique NamemRNA_M-pyrifera_M_contig70652.16865.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig70652.16865.1 vs. uniprot
Match: I1JTR0_SOYBN (Uncharacterized protein n=13 Tax=Phaseoleae TaxID=163735 RepID=I1JTR0_SOYBN)

HSP 1 Score: 127 bits (320), Expect = 4.620e-31
Identity = 84/249 (33.73%), Postives = 116/249 (46.59%), Query Frame = 1
Query:    7 IRLFDPISGGGAQVLQGHRGGCAALAWCPGQEFMLASGGEDGAVRFWDIRRPGTLLCLDDKN-----------------------------------------GNTLSSVPLTARLP---LVSLTNATAHSACVTALHFLPDGVHLVTAAADKRVKLWDVLSAKNTRREFDLGARRLEFTRFARLSSSSDSRLLAVPVGAGVFLFDTLTNERLTDLEGHFDAVHAAAFNPNIQEMYTGGGDAVMQVWKP 621
            +RL D  SG  A  L GHR G   + W    E++L +GG DGA+RFWDIRR G    LD                                            G   S  P+  RL    L +   ATAH   VT L    DG++L++A +D R++LWDV S+ NT   F+    RL+  +  +L+++ DS L+ VP    V  FD  +    T L GH++ V++  FN + QE+YTGG D  + VW P
Sbjct:  184 VRLCDIASGAFAHTLSGHRDGVMTVEWSNSSEWVLVTGGCDGAIRFWDIRRAGCFQVLDQSQTQLGRRPPILKRSMITKDSSTKLRAAQKKHANGSGSRQQPIGRVPSKGPMKQRLHPGMLSTQDRATAHYGAVTGLKATEDGMYLLSAGSDSRLRLWDVESSCNTLVNFETV--RLQINKPLQLATTQDSALVFVPCMRSVKAFDMWSGNTYTILRGHYECVNSCWFNQHDQELYTGGNDRQILVWSP 430          
BLAST of mRNA_M-pyrifera_M_contig70652.16865.1 vs. uniprot
Match: A0A2K1XNW7_POPTR (Uncharacterized protein n=14 Tax=Saliceae TaxID=238069 RepID=A0A2K1XNW7_POPTR)

HSP 1 Score: 126 bits (316), Expect = 1.760e-30
Identity = 83/261 (31.80%), Postives = 117/261 (44.83%), Query Frame = 1
Query:    7 IRLFDPISGGGAQVLQGHRGGCAALAWCPGQEFMLASGGEDGAVRFWDIRRPGTLLCLDDKN-------------------------------------------GNTLSSVPLTARLP-------------LVSLTNATAHSACVTALHFLPDGVHLVTAAADKRVKLWDVLSAKNTRREFDLGARRLEFTRFARLSSSSDSRLLAVPVGAGVFLFDTLTNERLTDLEGHFDAVHAAAFNPNIQEMYTGGGDAVMQVWKP 621
            +RL D  SG  A  L GHR G   + W    E++L +GG DGA+RFWDIRR G  L LD                                              GN +   PL  ++P             L S   ATAH   VT L    DG++L++A +D R++LWDV S +NT   F+    RL+ ++  +L+++ DS L+ VP    V  FD  + +      GH++ V+   F+   QE+YTGG D  + VW P
Sbjct:  175 VRLCDIASGAFAHTLSGHRDGVMTVEWSTSSEWVLVTGGCDGAIRFWDIRRAGCFLVLDQSQSQLGRRPPVLARSAVSKVSTSKALSKGQNLLGKPRMPQKKSGGGNGIKHSPL-GQVPAKGYLKQRLHPGMLSSQDRATAHYGAVTGLKITEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETA--RLQTSKPIQLATAQDSNLVFVPCMTSVKAFDVWSGKTYVTFRGHYEHVNCCWFSSQDQELYTGGNDRQILVWSP 432          
BLAST of mRNA_M-pyrifera_M_contig70652.16865.1 vs. uniprot
Match: A0A2P5F008_TREOI (Guanine nucleotide-binding protein, beta subunit n=2 Tax=Cannabaceae TaxID=3481 RepID=A0A2P5F008_TREOI)

HSP 1 Score: 125 bits (313), Expect = 4.440e-30
Identity = 84/261 (32.18%), Postives = 121/261 (46.36%), Query Frame = 1
Query:    7 IRLFDPISGGGAQVLQGHRGGCAALAWCPGQEFMLASGGEDGAVRFWDIRRPGTLLCLDDK------------------------------------------NGNTLSSVPL---TARLPL---------VSLTNATAHSACVTALHFLPDGVHLVTAAADKRVKLWDVLSAKNTRREFDLGARRLEFTRFARLSSSSDSRLLAVPVGAGVFLFDTLTNERLTDLEGHFDAVHAAAFNPNIQEMYTGGGDAVMQVWKPLS 627
            +RL D  SG  A  L GHR G   + W    E++L +GG DGA+RFWDIRR G  L LD                                            NGN+    P+   +A+ PL          +   ATAH   VT L    DG++L++A +D R++LWDV S +NT   F+    RL+ ++  +L++S +S L+ VP    V  FD  + +      GH+++V+   F+   QE+YTGG D  + VW P S
Sbjct:  172 VRLCDIASGAFAHTLSGHRDGVMTVEWSTSSEWVLVTGGCDGAIRFWDIRRAGCFLVLDQSQTQLGRRPPILECSAANKVSTSKSTTVPSSLAKSRAAQRKVANGNSTKQSPIGKISAKGPLRQRLHPGMLSTQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRLRLWDVESGRNTLVNFETV--RLQSSKPMQLATSQNSSLVFVPCMTTVKAFDMWSGKTSLTFRGHYESVNCCWFSSQDQELYTGGNDRQILVWSPSS 430          
BLAST of mRNA_M-pyrifera_M_contig70652.16865.1 vs. uniprot
Match: UPI000CE21111 (DNA excision repair protein ERCC-8-like n=1 Tax=Quercus suber TaxID=58331 RepID=UPI000CE21111)

HSP 1 Score: 122 bits (306), Expect = 4.970e-30
Identity = 85/261 (32.57%), Postives = 115/261 (44.06%), Query Frame = 1
Query:    7 IRLFDPISGGGAQVLQGHRGGCAALAWCPGQEFMLASGGEDGAVRFWDIRRPGTLLCLDDK-------------------------------------------NGNTLSSVPLTARLP-------------LVSLTNATAHSACVTALHFLPDGVHLVTAAADKRVKLWDVLSAKNTRREFDLGARRLEFTRFARLSSSSDSRLLAVPVGAGVFLFDTLTNERLTDLEGHFDAVHAAAFNPNIQEMYTGGGDAVMQVWKP 621
            +RL D  SG  +  L GHR G   + W    E++L +GG DGA+RFWDIRR G  L LD                                             NGN     P+  R+P             L SL  ATAH   VT L    DG++L++A +D R++LWDV S  NT   F+    RL+  +  +L++S DS L+ VP    V  FD  +        GH++ V++  F    QE+YTGG D  + VW P
Sbjct:   33 VRLCDIASGAFSHTLSGHRDGVMTVEWSTSSEWVLVTGGCDGAIRFWDIRRAGCFLVLDQSHSQLGRRPTIPEHSATNKALTSKSLSSGQNLNAKPRAQQRKLANGNGTKQSPV-GRMPAKGSLRQRLHPGMLSSLDRATAHYGAVTGLKATEDGMYLLSAGSDSRLRLWDVESGCNTLVNFETV--RLQAGKPIQLATSQDSALVFVPCMTAVKAFDVWSGNTSQTFRGHYEYVNSCWFCSQEQELYTGGNDKQILVWSP 290          
BLAST of mRNA_M-pyrifera_M_contig70652.16865.1 vs. uniprot
Match: A0A067LBY8_JATCU (Uncharacterized protein n=2 Tax=Jatropha curcas TaxID=180498 RepID=A0A067LBY8_JATCU)

HSP 1 Score: 124 bits (312), Expect = 5.090e-30
Identity = 79/243 (32.51%), Postives = 113/243 (46.50%), Query Frame = 1
Query:    7 IRLFDPISGGGAQVLQGHRGGCAALAWCPGQEFMLASGGEDGAVRFWDIRRPGTLLCLDDK-------------------------NGNTLSSVPLTARLPLVS-------------LTNATAHSACVTALHFLPDGVHLVTAAADKRVKLWDVLSAKNTRREFDLGARRLEFTRFARLSSSSDSRLLAVPVGAGVFLFDTLTNERLTDLEGHFDAVHAAAFNPNIQEMYTGGGDAVMQVWKP 621
            +RL D  SG  A  L GHR    ++ W    E++L +GG DGA+RFWDIRR G    L+                           +GN +   PL  R P+               L +  AH   VT L    DG+++++A +D R++LWD+ S  NT   F+    RL+ T+  +L+++ DS L+ VP    V  FD  +        GH++ V+   FN   QEMYTGG D  + VW P
Sbjct:  172 VRLCDIASGAFAHTLSGHRASVMSVEWSTSSEWILVTGGFDGAIRFWDIRRAGCFRVLNQTESQLGRRPPILSRSITNKAAQKKSASGNEMRKSPL-GRTPVKGPVRRRLHPGMSSMLDSGAAHFGAVTGLKMTEDGMYILSAGSDSRMRLWDIESGCNTLVNFETA--RLQTTKPLQLATTQDSSLVFVPCMTTVKAFDVWSGRTFMTFRGHYEEVNCCWFNSQDQEMYTGGNDNQILVWSP 411          
BLAST of mRNA_M-pyrifera_M_contig70652.16865.1 vs. uniprot
Match: UPI0018D9204B (DNA excision repair protein ERCC-8-like isoform X1 n=2 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D9204B)

HSP 1 Score: 124 bits (311), Expect = 5.140e-30
Identity = 74/210 (35.24%), Postives = 108/210 (51.43%), Query Frame = 1
Query:    7 IRLFDPISGGGAQVLQGHRGGCAALAWCPGQEFMLASGGEDGAVRFWDIRRP-GTLLCLDDKNGNTLSSVPLTARLPLVSLTNATAHSACVTALHFLPDGVHLVTAAADKRVKLWDVLSAKNTRREFDL----GARRLEFTRFARLSSSSDSRLLAVPVGAGVFLFDTLTNERLTDLEGHFDAVHAAAFNPNIQEMYTGGGDAVMQVWKP 621
            I L D  +G    +L+GHR     + W P QEF+LASG +D  +  WDIR+  G L+ LD  NG  +       R         TAHS  V  L F  DG+ L++   D R++LWDV++ KNT   F      G + ++      +SS +      VP  A V +FD    E + DL+GH+  V+   F+P  QE+Y+GG D+ + +W+P
Sbjct:  168 ISLCDLKTGSPTHILKGHRAAVMCVKWSPKQEFLLASGSQDNKLMLWDIRKAKGCLMALDQHNGEAVGHSSTAVR---------TAHSGHVNGLCFTEDGLRLLSYGTDDRLRLWDVVTGKNTLVNFGKVTNDGRKNVKLA----VSSGAVPDAAFVPNTADVAVFDVQNGELVYDLKGHYSNVNCCTFHPLFQEVYSGGNDSNILLWEP 364          
BLAST of mRNA_M-pyrifera_M_contig70652.16865.1 vs. uniprot
Match: A0A6A7GD38_9CRUS (DNA excision repair protein ERCC-8 (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7GD38_9CRUS)

HSP 1 Score: 122 bits (306), Expect = 8.250e-30
Identity = 74/209 (35.41%), Postives = 110/209 (52.63%), Query Frame = 1
Query:    7 IRLFDPISGGGAQVLQGHRGGCAALAWCPGQEFMLASGGEDGAVRFWDIRRPGTLLCLDDKNGNTLSSVPLTARLPLVSLTN--ATAHSACVTALHFLPDGVHLVTAAADKRVKLWDVLSAKNTRREFDLGARRLEFTRFARLSSSSDSRLLAVPVGAGVFLFDTLTNERLTDLEGHFDAVHAAAFNPNIQEMYTGGGDAVMQVWKPLS 627
            +RL D  +G  A  L GH     ++AW P  E MLASG  D  +R WDIRRPG+L+ LD  N N   S+      P  S+ +    +HS  V +L F PDG H++++  D+R+++WD  S KNT   ++   R    +R   ++ S    LL VP    + +    +   +  L GHFD+V+  A +P   E+Y+G  D ++ VW P S
Sbjct:  110 VRLCDIRTGAFAHSLMGHSKPVWSVAWSPRDEHMLASGSVDHTIRLWDIRRPGSLMVLDMHN-NVNPSLNKNFINPKDSVRSRYVQSHSGAVQSLQFTPDGHHVISSGTDRRIRMWDTKSGKNTFVNYE---RPRSVSRKTNIAFSHSGDLLFVPSAKTIQIQSVHSGMLINVLRGHFDSVNCCAVHPRNVELYSGSVDHMLLVWTPKS 314          
BLAST of mRNA_M-pyrifera_M_contig70652.16865.1 vs. uniprot
Match: UPI001C26B978 (WD repeat-containing protein ATCSA-1-like n=3 Tax=Salvia TaxID=21880 RepID=UPI001C26B978)

HSP 1 Score: 124 bits (311), Expect = 8.670e-30
Identity = 83/254 (32.68%), Postives = 118/254 (46.46%), Query Frame = 1
Query:    7 IRLFDPISGGGAQVLQGHRGGCAALAWCPGQEFMLASGGEDGAVRFWDIRRPGTLLCLDDK-----------------------------------NGNTLSSVPLTARLP--------------LVSLTNATAHSACVTALHFLPDGVHLVTAAADKRVKLWDVLSAKNTRREFDLGARRLEFTRFARLSSSSDSRLLAVPVGAGVFLFDTLTNERLTDLEGHFDAVHAAAFNPNIQEMYTGGGDAVMQVWKP 621
            +RL D  SG  A  L GHR G  +L W    E++L +GG DGA+RFWDIRR G    LD                                     NGNT+ S  +T ++P              + S   ATAH   VT L    DG++L++A +D R++LWD+ S  NT   F+    RL+ ++  +++ S DS L  VP    V +FD  + +      GH++ V+   +N   QE+YTGG D  + VW P
Sbjct:  172 VRLCDIASGAFAHTLSGHRDGVMSLEWSTSSEWVLVTGGCDGAIRFWDIRRAGCFRVLDQSHSQLGRRPPLLXXXXXXXXXXXXXARARPPQRKSTNGNTVKSHGVT-KVPSQMKGAKQRSHPGMISSHDRATAHYGVVTGLKVTEDGMYLLSAGSDSRLRLWDIESGCNTLVNFETA--RLQSSKAIQMAVSQDSALSFVPCMTTVKVFDIWSGQTKYAFRGHYENVNCCWYNAQDQELYTGGNDRQILVWSP 422          
BLAST of mRNA_M-pyrifera_M_contig70652.16865.1 vs. uniprot
Match: A0A2C9VYR9_MANES (Uncharacterized protein n=4 Tax=Crotonoideae TaxID=235631 RepID=A0A2C9VYR9_MANES)

HSP 1 Score: 124 bits (311), Expect = 8.880e-30
Identity = 86/260 (33.08%), Postives = 114/260 (43.85%), Query Frame = 1
Query:    7 IRLFDPISGGGAQVLQGHRGGCAALAWCPGQEFMLASGGEDGAVRFWDIRRPGTLLCLDDKN--------------------------GNTLSSVPLT----------------ARLP-------------LVSLTNATAHSACVTALHFLPDGVHLVTAAADKRVKLWDVLSAKNTRREFDLGARRLEFTRFARLSSSSDSRLLAVPVGAGVFLFDTLTNERLTDLEGHFDAVHAAAFNPNIQEMYTGGGDAVMQVWKP 621
            +RL D  SG  A  L GHR G   + W    EF+L +GG DGA+RFWDIRR G    LD                             G +LSS P                   R P             L S   ATAH   VT L    DG++L++A +D R++LWDV S  NT   F+    RL+ ++  +L+++ D+ L+ VP    V  FD  +        GH++ V+   FN   QEMYTGG D  + VW P
Sbjct:  172 VRLCDIASGAFAHTLSGHRDGVMTVEWSTSSEFVLITGGCDGAIRFWDIRRAGCFRVLDQSKSQLGRRPPILSCSTTNKVSVSKALSAGQSLSSKPRAQQKKSAGGNGIKQSPLCRTPAKGPVRQRLHPGMLSSQDRATAHYGAVTGLKITEDGMYLLSAGSDSRMRLWDVESGCNTLVNFETV--RLQTSKAIQLATTQDASLVFVPCMTAVKAFDLWSGMTFRTFRGHYEYVNCCWFNSQDQEMYTGGNDRQILVWSP 429          
BLAST of mRNA_M-pyrifera_M_contig70652.16865.1 vs. uniprot
Match: A0A251TYN5_HELAN (Putative transducin/WD40 repeat-like superfamily protein n=3 Tax=Heliantheae alliance TaxID=911341 RepID=A0A251TYN5_HELAN)

HSP 1 Score: 124 bits (310), Expect = 1.170e-29
Identity = 78/253 (30.83%), Postives = 117/253 (46.25%), Query Frame = 1
Query:    7 IRLFDPISGGGAQVLQGHRGGCAALAWCPGQEFMLASGGEDGAVRFWDIRRPGTLLCLDDKNGNTLSSVPLT-----------ARLP----------------------------------LVSLTNATAHSACVTALHFLPDGVHLVTAAADKRVKLWDVLSAKNTRREFDLGARRLEFTRFARLSSSSDSRLLAVPVGAGVFLFDTLTNERLTDLEGHFDAVHAAAFNPNIQEMYTGGGDAVMQVWKPLSE 630
            +RL D  SG  A  L GHR G  A+ W    E++L +GG DGA+RFWDIRR G    LD  +       PL            AR P                                  L S   ATAH   V  L    DG++L++A +D R++LWD+ S  NT   +++   RL+ ++  +L  S DS ++ +P    +  FD  + +    L+GH++ V+   ++ + QE+YTGG D  + +W PL +
Sbjct:  171 VRLCDMASGAFAHTLSGHRDGVMAVEWSTSSEWILMTGGCDGAIRFWDIRRAGCFSVLDQSHSQLGRRPPLADKSTTKVSTSKARAPPRKVGSGSSSKHSGNSKIIKQTKGSAKQRLHPGLLTSQDRATAHYGAVLGLKATEDGMYLLSAGSDSRLRLWDIQSGCNTLVHYEIV--RLQSSKAIQLDVSQDSGVVFLPCMTSIKAFDMWSGKSKMTLQGHYENVNCCCYSSHDQELYTGGNDRQILIWSPLKQ 421          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig70652.16865.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
I1JTR0_SOYBN4.620e-3133.73Uncharacterized protein n=13 Tax=Phaseoleae TaxID=... [more]
A0A2K1XNW7_POPTR1.760e-3031.80Uncharacterized protein n=14 Tax=Saliceae TaxID=23... [more]
A0A2P5F008_TREOI4.440e-3032.18Guanine nucleotide-binding protein, beta subunit n... [more]
UPI000CE211114.970e-3032.57DNA excision repair protein ERCC-8-like n=1 Tax=Qu... [more]
A0A067LBY8_JATCU5.090e-3032.51Uncharacterized protein n=2 Tax=Jatropha curcas Ta... [more]
UPI0018D9204B5.140e-3035.24DNA excision repair protein ERCC-8-like isoform X1... [more]
A0A6A7GD38_9CRUS8.250e-3035.41DNA excision repair protein ERCC-8 (Fragment) n=1 ... [more]
UPI001C26B9788.670e-3032.68WD repeat-containing protein ATCSA-1-like n=3 Tax=... [more]
A0A2C9VYR9_MANES8.880e-3033.08Uncharacterized protein n=4 Tax=Crotonoideae TaxID... [more]
A0A251TYN5_HELAN1.170e-2930.83Putative transducin/WD40 repeat-like superfamily p... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig70652contigM-pyrifera_M_contig70652:271..1139 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score129.4
Seed ortholog evalue2e-27
Seed eggNOG ortholog3847.GLYMA04G04840.1
KEGG koko:K10570
KEGG Pathwayko03420,ko04120,map03420,map04120
KEGG ModuleM00386
Hectar predicted targeting categoryother localisation
GOsGO:0000209,GO:0003674,GO:0005488,GO:0005575,GO:0006139,GO:0006259,GO:0006281,GO:0006282,GO:0006283,GO:0006289,GO:0006464,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006979,GO:0008150,GO:0008152,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009893,GO:0009987,GO:0010604,GO:0016567,GO:0019219,GO:0019222,GO:0019538,GO:0031323,GO:0031325,GO:0032446,GO:0032991,GO:0033554,GO:0034641,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044877,GO:0045739,GO:0045935,GO:0046483,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051054,GO:0051171,GO:0051173,GO:0051716,GO:0051865,GO:0060255,GO:0065007,GO:0070647,GO:0071704,GO:0080090,GO:0080134,GO:0080135,GO:0090304,GO:1901360,GO:1901564,GO:2001020,GO:2001022
EggNOG free text desc.DNA excision repair protein
EggNOG OGs37N2M@33090,3G9EF@35493,4JEPP@91835,KOG4283@1,KOG4283@2759
COG Functional cat.KL
Best tax levelfabids
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03400,ko04121
Exons4
Model size663
Cds size660
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig70652.16865.1prot_M-pyrifera_M_contig70652.16865.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig70652 274..1139 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816599.7200723-UTR-M-pyrifera_M_contig70652:270..2731622816599.7200723-UTR-M-pyrifera_M_contig70652:270..273Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig70652 271..273 +
1692278069.9019656-UTR-M-pyrifera_M_contig70652:270..2731692278069.9019656-UTR-M-pyrifera_M_contig70652:270..273Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig70652 271..273 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816599.7315116-CDS-M-pyrifera_M_contig70652:273..4761622816599.7315116-CDS-M-pyrifera_M_contig70652:273..476Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig70652 274..476 +
1692278069.9129732-CDS-M-pyrifera_M_contig70652:273..4761692278069.9129732-CDS-M-pyrifera_M_contig70652:273..476Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig70652 274..476 +
1622816599.7437773-CDS-M-pyrifera_M_contig70652:503..5421622816599.7437773-CDS-M-pyrifera_M_contig70652:503..542Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig70652 504..542 +
1692278069.928049-CDS-M-pyrifera_M_contig70652:503..5421692278069.928049-CDS-M-pyrifera_M_contig70652:503..542Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig70652 504..542 +
1622816599.7549706-CDS-M-pyrifera_M_contig70652:563..8911622816599.7549706-CDS-M-pyrifera_M_contig70652:563..891Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig70652 564..891 +
1692278069.9402747-CDS-M-pyrifera_M_contig70652:563..8911692278069.9402747-CDS-M-pyrifera_M_contig70652:563..891Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig70652 564..891 +
1622816599.7670307-CDS-M-pyrifera_M_contig70652:1049..11391622816599.7670307-CDS-M-pyrifera_M_contig70652:1049..1139Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig70652 1050..1139 +
1692278069.9519224-CDS-M-pyrifera_M_contig70652:1049..11391692278069.9519224-CDS-M-pyrifera_M_contig70652:1049..1139Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig70652 1050..1139 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig70652.16865.1

>prot_M-pyrifera_M_contig70652.16865.1 ID=prot_M-pyrifera_M_contig70652.16865.1|Name=mRNA_M-pyrifera_M_contig70652.16865.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=220bp
MIRLFDPISGGGAQVLQGHRGGCAALAWCPGQEFMLASGGEDGAVRFWDI
RRPGTLLCLDDKNGNTLSSVPLTARLPLVSLTNATAHSACVTALHFLPDG
VHLVTAAADKRVKLWDVLSAKNTRREFDLGARRLEFTRFARLSSSSDSRL
LAVPVGAGVFLFDTLTNERLTDLEGHFDAVHAAAFNPNIQEMYTGGGDAV
MQVWKPLSEQEAIMQEAGEE
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mRNA from alignment at M-pyrifera_M_contig70652:271..1139+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig70652.16865.1 ID=mRNA_M-pyrifera_M_contig70652.16865.1|Name=mRNA_M-pyrifera_M_contig70652.16865.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=869bp|location=Sequence derived from alignment at M-pyrifera_M_contig70652:271..1139+ (Macrocystis pyrifera P11B4 male)
CGAATGATCCGCCTGTTCGATCCCATCAGCGGCGGTGGTGCCCAAGTGCT CCAGGGGCACCGCGGCGGCTGCGCTGCCCTCGCCTGGTGCCCTGGCCAGG AGTTCATGTTGGCCAGTGGCGGTGAGGATGGAGCTGTTCGCTTCTGGGAT ATAAGAAGGCCTGGCACTCTCCTATGCCTCGACGACAAGAACGGAAACAC ACTGAGGTGAGCTTTACGCGACTACGTTATTAGCTCTGTTCCGCTCACCG CAAGGCTTCCTCTGGTTTCGCTGTGAGCTTACATTGGTGACAGTACAAAC GCCACGGCGCATTCTGCATGTGTCACTGCCCTTCACTTTCTCCCTGACGG CGTTCATCTTGTGACTGCCGCCGCAGACAAGAGAGTAAAGCTCTGGGATG TGCTCTCTGCCAAGAACACGAGGAGAGAGTTCGACCTTGGAGCGCGTCGC CTGGAGTTCACTAGGTTTGCAAGGCTCTCCTCCAGCAGTGACTCGCGCCT CCTGGCGGTGCCTGTCGGTGCAGGAGTGTTCCTCTTCGACACCCTCACCA ACGAGCGCCTCACCGATCTTGAGGGCCATTTCGATGCCGTTCATGCCGCC GCATTCAACCCCAACATCCAAGTACGTCTGCGACTGAGCTGTTTCACTCT TACACGCGCACACAAACACACACTCTCTCTCCCTCGTTCTCCCTCACGCA CTCTCCGCGAGCGCAAATACTCTGTTTCTCGTTATGCTTTACGGCTGTAT TCGACGCGGTATTGACTTTGTTTGTGAAGGAGATGTACACTGGTGGAGGT GATGCTGTCATGCAAGTGTGGAAGCCCCTGTCGGAGCAGGAGGCCATTAT GCAGGAGGCCGGCGAAGAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig70652:271..1139+

>mRNA_M-pyrifera_M_contig70652.16865.1 ID=mRNA_M-pyrifera_M_contig70652.16865.1|Name=mRNA_M-pyrifera_M_contig70652.16865.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1320bp|location=Sequence derived from alignment at M-pyrifera_M_contig70652:271..1139+ (Macrocystis pyrifera P11B4 male)
ATGATCCGCCTGTTCGATCCCATCAGCGGCGGTGGTGCCCAAGTGCTCCA
GGGGCACCGCGGCGGCTGCGCTGCCCTCGCCTGGTGCCCTGGCCAGGAGT
TCATGTTGGCCAGTGGCGGTGAGGATGGAGCTGTTCGCTTCTGGGATATA
AGAAGGCCTGGCACTCTCCTATGCCTCGACGACAAGAACGGAAACACACT
GAGATGATCCGCCTGTTCGATCCCATCAGCGGCGGTGGTGCCCAAGTGCT
CCAGGGGCACCGCGGCGGCTGCGCTGCCCTCGCCTGGTGCCCTGGCCAGG
AGTTCATGTTGGCCAGTGGCGGTGAGGATGGAGCTGTTCGCTTCTGGGAT
ATAAGAAGGCCTGGCACTCTCCTATGCCTCGACGACAAGAACGGAAACAC
ACTGAGCTCTGTTCCGCTCACCGCAAGGCTTCCTCTGGTTTCGCTCTCTG
TTCCGCTCACCGCAAGGCTTCCTCTGGTTTCGCTTACAAACGCCACGGCG
CATTCTGCATGTGTCACTGCCCTTCACTTTCTCCCTGACGGCGTTCATCT
TGTGACTGCCGCCGCAGACAAGAGAGTAAAGCTCTGGGATGTGCTCTCTG
CCAAGAACACGAGGAGAGAGTTCGACCTTGGAGCGCGTCGCCTGGAGTTC
ACTAGGTTTGCAAGGCTCTCCTCCAGCAGTGACTCGCGCCTCCTGGCGGT
GCCTGTCGGTGCAGGAGTGTTCCTCTTCGACACCCTCACCAACGAGCGCC
TCACCGATCTTGAGGGCCATTTCGATGCCGTTCATGCCGCCGCATTCAAC
CCCAACATCCAATACAAACGCCACGGCGCATTCTGCATGTGTCACTGCCC
TTCACTTTCTCCCTGACGGCGTTCATCTTGTGACTGCCGCCGCAGACAAG
AGAGTAAAGCTCTGGGATGTGCTCTCTGCCAAGAACACGAGGAGAGAGTT
CGACCTTGGAGCGCGTCGCCTGGAGTTCACTAGGTTTGCAAGGCTCTCCT
CCAGCAGTGACTCGCGCCTCCTGGCGGTGCCTGTCGGTGCAGGAGTGTTC
CTCTTCGACACCCTCACCAACGAGCGCCTCACCGATCTTGAGGGCCATTT
CGATGCCGTTCATGCCGCCGCATTCAACCCCAACATCCAAGAGATGTACA
CTGGTGGAGGTGATGCTGTCATGCAAGTGTGGAAGCCCCTGTCGGAGCAG
GAGGCCATTATGCAGGAGGCCGGCGAAGAGGAGATGTACACTGGTGGAGG
TGATGCTGTCATGCAAGTGTGGAAGCCCCTGTCGGAGCAGGAGGCCATTA
TGCAGGAGGCCGGCGAAGAG
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