mRNA_M-pyrifera_M_contig70652.16865.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig70652.16865.1 vs. uniprot
Match: I1JTR0_SOYBN (Uncharacterized protein n=13 Tax=Phaseoleae TaxID=163735 RepID=I1JTR0_SOYBN) HSP 1 Score: 127 bits (320), Expect = 4.620e-31 Identity = 84/249 (33.73%), Postives = 116/249 (46.59%), Query Frame = 1 Query: 7 IRLFDPISGGGAQVLQGHRGGCAALAWCPGQEFMLASGGEDGAVRFWDIRRPGTLLCLDDKN-----------------------------------------GNTLSSVPLTARLP---LVSLTNATAHSACVTALHFLPDGVHLVTAAADKRVKLWDVLSAKNTRREFDLGARRLEFTRFARLSSSSDSRLLAVPVGAGVFLFDTLTNERLTDLEGHFDAVHAAAFNPNIQEMYTGGGDAVMQVWKP 621 +RL D SG A L GHR G + W E++L +GG DGA+RFWDIRR G LD G S P+ RL L + ATAH VT L DG++L++A +D R++LWDV S+ NT F+ RL+ + +L+++ DS L+ VP V FD + T L GH++ V++ FN + QE+YTGG D + VW P Sbjct: 184 VRLCDIASGAFAHTLSGHRDGVMTVEWSNSSEWVLVTGGCDGAIRFWDIRRAGCFQVLDQSQTQLGRRPPILKRSMITKDSSTKLRAAQKKHANGSGSRQQPIGRVPSKGPMKQRLHPGMLSTQDRATAHYGAVTGLKATEDGMYLLSAGSDSRLRLWDVESSCNTLVNFETV--RLQINKPLQLATTQDSALVFVPCMRSVKAFDMWSGNTYTILRGHYECVNSCWFNQHDQELYTGGNDRQILVWSP 430
BLAST of mRNA_M-pyrifera_M_contig70652.16865.1 vs. uniprot
Match: A0A2K1XNW7_POPTR (Uncharacterized protein n=14 Tax=Saliceae TaxID=238069 RepID=A0A2K1XNW7_POPTR) HSP 1 Score: 126 bits (316), Expect = 1.760e-30 Identity = 83/261 (31.80%), Postives = 117/261 (44.83%), Query Frame = 1 Query: 7 IRLFDPISGGGAQVLQGHRGGCAALAWCPGQEFMLASGGEDGAVRFWDIRRPGTLLCLDDKN-------------------------------------------GNTLSSVPLTARLP-------------LVSLTNATAHSACVTALHFLPDGVHLVTAAADKRVKLWDVLSAKNTRREFDLGARRLEFTRFARLSSSSDSRLLAVPVGAGVFLFDTLTNERLTDLEGHFDAVHAAAFNPNIQEMYTGGGDAVMQVWKP 621 +RL D SG A L GHR G + W E++L +GG DGA+RFWDIRR G L LD GN + PL ++P L S ATAH VT L DG++L++A +D R++LWDV S +NT F+ RL+ ++ +L+++ DS L+ VP V FD + + GH++ V+ F+ QE+YTGG D + VW P Sbjct: 175 VRLCDIASGAFAHTLSGHRDGVMTVEWSTSSEWVLVTGGCDGAIRFWDIRRAGCFLVLDQSQSQLGRRPPVLARSAVSKVSTSKALSKGQNLLGKPRMPQKKSGGGNGIKHSPL-GQVPAKGYLKQRLHPGMLSSQDRATAHYGAVTGLKITEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETA--RLQTSKPIQLATAQDSNLVFVPCMTSVKAFDVWSGKTYVTFRGHYEHVNCCWFSSQDQELYTGGNDRQILVWSP 432
BLAST of mRNA_M-pyrifera_M_contig70652.16865.1 vs. uniprot
Match: A0A2P5F008_TREOI (Guanine nucleotide-binding protein, beta subunit n=2 Tax=Cannabaceae TaxID=3481 RepID=A0A2P5F008_TREOI) HSP 1 Score: 125 bits (313), Expect = 4.440e-30 Identity = 84/261 (32.18%), Postives = 121/261 (46.36%), Query Frame = 1 Query: 7 IRLFDPISGGGAQVLQGHRGGCAALAWCPGQEFMLASGGEDGAVRFWDIRRPGTLLCLDDK------------------------------------------NGNTLSSVPL---TARLPL---------VSLTNATAHSACVTALHFLPDGVHLVTAAADKRVKLWDVLSAKNTRREFDLGARRLEFTRFARLSSSSDSRLLAVPVGAGVFLFDTLTNERLTDLEGHFDAVHAAAFNPNIQEMYTGGGDAVMQVWKPLS 627 +RL D SG A L GHR G + W E++L +GG DGA+RFWDIRR G L LD NGN+ P+ +A+ PL + ATAH VT L DG++L++A +D R++LWDV S +NT F+ RL+ ++ +L++S +S L+ VP V FD + + GH+++V+ F+ QE+YTGG D + VW P S Sbjct: 172 VRLCDIASGAFAHTLSGHRDGVMTVEWSTSSEWVLVTGGCDGAIRFWDIRRAGCFLVLDQSQTQLGRRPPILECSAANKVSTSKSTTVPSSLAKSRAAQRKVANGNSTKQSPIGKISAKGPLRQRLHPGMLSTQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRLRLWDVESGRNTLVNFETV--RLQSSKPMQLATSQNSSLVFVPCMTTVKAFDMWSGKTSLTFRGHYESVNCCWFSSQDQELYTGGNDRQILVWSPSS 430
BLAST of mRNA_M-pyrifera_M_contig70652.16865.1 vs. uniprot
Match: UPI000CE21111 (DNA excision repair protein ERCC-8-like n=1 Tax=Quercus suber TaxID=58331 RepID=UPI000CE21111) HSP 1 Score: 122 bits (306), Expect = 4.970e-30 Identity = 85/261 (32.57%), Postives = 115/261 (44.06%), Query Frame = 1 Query: 7 IRLFDPISGGGAQVLQGHRGGCAALAWCPGQEFMLASGGEDGAVRFWDIRRPGTLLCLDDK-------------------------------------------NGNTLSSVPLTARLP-------------LVSLTNATAHSACVTALHFLPDGVHLVTAAADKRVKLWDVLSAKNTRREFDLGARRLEFTRFARLSSSSDSRLLAVPVGAGVFLFDTLTNERLTDLEGHFDAVHAAAFNPNIQEMYTGGGDAVMQVWKP 621 +RL D SG + L GHR G + W E++L +GG DGA+RFWDIRR G L LD NGN P+ R+P L SL ATAH VT L DG++L++A +D R++LWDV S NT F+ RL+ + +L++S DS L+ VP V FD + GH++ V++ F QE+YTGG D + VW P Sbjct: 33 VRLCDIASGAFSHTLSGHRDGVMTVEWSTSSEWVLVTGGCDGAIRFWDIRRAGCFLVLDQSHSQLGRRPTIPEHSATNKALTSKSLSSGQNLNAKPRAQQRKLANGNGTKQSPV-GRMPAKGSLRQRLHPGMLSSLDRATAHYGAVTGLKATEDGMYLLSAGSDSRLRLWDVESGCNTLVNFETV--RLQAGKPIQLATSQDSALVFVPCMTAVKAFDVWSGNTSQTFRGHYEYVNSCWFCSQEQELYTGGNDKQILVWSP 290
BLAST of mRNA_M-pyrifera_M_contig70652.16865.1 vs. uniprot
Match: A0A067LBY8_JATCU (Uncharacterized protein n=2 Tax=Jatropha curcas TaxID=180498 RepID=A0A067LBY8_JATCU) HSP 1 Score: 124 bits (312), Expect = 5.090e-30 Identity = 79/243 (32.51%), Postives = 113/243 (46.50%), Query Frame = 1 Query: 7 IRLFDPISGGGAQVLQGHRGGCAALAWCPGQEFMLASGGEDGAVRFWDIRRPGTLLCLDDK-------------------------NGNTLSSVPLTARLPLVS-------------LTNATAHSACVTALHFLPDGVHLVTAAADKRVKLWDVLSAKNTRREFDLGARRLEFTRFARLSSSSDSRLLAVPVGAGVFLFDTLTNERLTDLEGHFDAVHAAAFNPNIQEMYTGGGDAVMQVWKP 621 +RL D SG A L GHR ++ W E++L +GG DGA+RFWDIRR G L+ +GN + PL R P+ L + AH VT L DG+++++A +D R++LWD+ S NT F+ RL+ T+ +L+++ DS L+ VP V FD + GH++ V+ FN QEMYTGG D + VW P Sbjct: 172 VRLCDIASGAFAHTLSGHRASVMSVEWSTSSEWILVTGGFDGAIRFWDIRRAGCFRVLNQTESQLGRRPPILSRSITNKAAQKKSASGNEMRKSPL-GRTPVKGPVRRRLHPGMSSMLDSGAAHFGAVTGLKMTEDGMYILSAGSDSRMRLWDIESGCNTLVNFETA--RLQTTKPLQLATTQDSSLVFVPCMTTVKAFDVWSGRTFMTFRGHYEEVNCCWFNSQDQEMYTGGNDNQILVWSP 411
BLAST of mRNA_M-pyrifera_M_contig70652.16865.1 vs. uniprot
Match: UPI0018D9204B (DNA excision repair protein ERCC-8-like isoform X1 n=2 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D9204B) HSP 1 Score: 124 bits (311), Expect = 5.140e-30 Identity = 74/210 (35.24%), Postives = 108/210 (51.43%), Query Frame = 1 Query: 7 IRLFDPISGGGAQVLQGHRGGCAALAWCPGQEFMLASGGEDGAVRFWDIRRP-GTLLCLDDKNGNTLSSVPLTARLPLVSLTNATAHSACVTALHFLPDGVHLVTAAADKRVKLWDVLSAKNTRREFDL----GARRLEFTRFARLSSSSDSRLLAVPVGAGVFLFDTLTNERLTDLEGHFDAVHAAAFNPNIQEMYTGGGDAVMQVWKP 621 I L D +G +L+GHR + W P QEF+LASG +D + WDIR+ G L+ LD NG + R TAHS V L F DG+ L++ D R++LWDV++ KNT F G + ++ +SS + VP A V +FD E + DL+GH+ V+ F+P QE+Y+GG D+ + +W+P Sbjct: 168 ISLCDLKTGSPTHILKGHRAAVMCVKWSPKQEFLLASGSQDNKLMLWDIRKAKGCLMALDQHNGEAVGHSSTAVR---------TAHSGHVNGLCFTEDGLRLLSYGTDDRLRLWDVVTGKNTLVNFGKVTNDGRKNVKLA----VSSGAVPDAAFVPNTADVAVFDVQNGELVYDLKGHYSNVNCCTFHPLFQEVYSGGNDSNILLWEP 364
BLAST of mRNA_M-pyrifera_M_contig70652.16865.1 vs. uniprot
Match: A0A6A7GD38_9CRUS (DNA excision repair protein ERCC-8 (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7GD38_9CRUS) HSP 1 Score: 122 bits (306), Expect = 8.250e-30 Identity = 74/209 (35.41%), Postives = 110/209 (52.63%), Query Frame = 1 Query: 7 IRLFDPISGGGAQVLQGHRGGCAALAWCPGQEFMLASGGEDGAVRFWDIRRPGTLLCLDDKNGNTLSSVPLTARLPLVSLTN--ATAHSACVTALHFLPDGVHLVTAAADKRVKLWDVLSAKNTRREFDLGARRLEFTRFARLSSSSDSRLLAVPVGAGVFLFDTLTNERLTDLEGHFDAVHAAAFNPNIQEMYTGGGDAVMQVWKPLS 627 +RL D +G A L GH ++AW P E MLASG D +R WDIRRPG+L+ LD N N S+ P S+ + +HS V +L F PDG H++++ D+R+++WD S KNT ++ R +R ++ S LL VP + + + + L GHFD+V+ A +P E+Y+G D ++ VW P S Sbjct: 110 VRLCDIRTGAFAHSLMGHSKPVWSVAWSPRDEHMLASGSVDHTIRLWDIRRPGSLMVLDMHN-NVNPSLNKNFINPKDSVRSRYVQSHSGAVQSLQFTPDGHHVISSGTDRRIRMWDTKSGKNTFVNYE---RPRSVSRKTNIAFSHSGDLLFVPSAKTIQIQSVHSGMLINVLRGHFDSVNCCAVHPRNVELYSGSVDHMLLVWTPKS 314
BLAST of mRNA_M-pyrifera_M_contig70652.16865.1 vs. uniprot
Match: UPI001C26B978 (WD repeat-containing protein ATCSA-1-like n=3 Tax=Salvia TaxID=21880 RepID=UPI001C26B978) HSP 1 Score: 124 bits (311), Expect = 8.670e-30 Identity = 83/254 (32.68%), Postives = 118/254 (46.46%), Query Frame = 1 Query: 7 IRLFDPISGGGAQVLQGHRGGCAALAWCPGQEFMLASGGEDGAVRFWDIRRPGTLLCLDDK-----------------------------------NGNTLSSVPLTARLP--------------LVSLTNATAHSACVTALHFLPDGVHLVTAAADKRVKLWDVLSAKNTRREFDLGARRLEFTRFARLSSSSDSRLLAVPVGAGVFLFDTLTNERLTDLEGHFDAVHAAAFNPNIQEMYTGGGDAVMQVWKP 621 +RL D SG A L GHR G +L W E++L +GG DGA+RFWDIRR G LD NGNT+ S +T ++P + S ATAH VT L DG++L++A +D R++LWD+ S NT F+ RL+ ++ +++ S DS L VP V +FD + + GH++ V+ +N QE+YTGG D + VW P Sbjct: 172 VRLCDIASGAFAHTLSGHRDGVMSLEWSTSSEWVLVTGGCDGAIRFWDIRRAGCFRVLDQSHSQLGRRPPLLXXXXXXXXXXXXXARARPPQRKSTNGNTVKSHGVT-KVPSQMKGAKQRSHPGMISSHDRATAHYGVVTGLKVTEDGMYLLSAGSDSRLRLWDIESGCNTLVNFETA--RLQSSKAIQMAVSQDSALSFVPCMTTVKVFDIWSGQTKYAFRGHYENVNCCWYNAQDQELYTGGNDRQILVWSP 422
BLAST of mRNA_M-pyrifera_M_contig70652.16865.1 vs. uniprot
Match: A0A2C9VYR9_MANES (Uncharacterized protein n=4 Tax=Crotonoideae TaxID=235631 RepID=A0A2C9VYR9_MANES) HSP 1 Score: 124 bits (311), Expect = 8.880e-30 Identity = 86/260 (33.08%), Postives = 114/260 (43.85%), Query Frame = 1 Query: 7 IRLFDPISGGGAQVLQGHRGGCAALAWCPGQEFMLASGGEDGAVRFWDIRRPGTLLCLDDKN--------------------------GNTLSSVPLT----------------ARLP-------------LVSLTNATAHSACVTALHFLPDGVHLVTAAADKRVKLWDVLSAKNTRREFDLGARRLEFTRFARLSSSSDSRLLAVPVGAGVFLFDTLTNERLTDLEGHFDAVHAAAFNPNIQEMYTGGGDAVMQVWKP 621 +RL D SG A L GHR G + W EF+L +GG DGA+RFWDIRR G LD G +LSS P R P L S ATAH VT L DG++L++A +D R++LWDV S NT F+ RL+ ++ +L+++ D+ L+ VP V FD + GH++ V+ FN QEMYTGG D + VW P Sbjct: 172 VRLCDIASGAFAHTLSGHRDGVMTVEWSTSSEFVLITGGCDGAIRFWDIRRAGCFRVLDQSKSQLGRRPPILSCSTTNKVSVSKALSAGQSLSSKPRAQQKKSAGGNGIKQSPLCRTPAKGPVRQRLHPGMLSSQDRATAHYGAVTGLKITEDGMYLLSAGSDSRMRLWDVESGCNTLVNFETV--RLQTSKAIQLATTQDASLVFVPCMTAVKAFDLWSGMTFRTFRGHYEYVNCCWFNSQDQEMYTGGNDRQILVWSP 429
BLAST of mRNA_M-pyrifera_M_contig70652.16865.1 vs. uniprot
Match: A0A251TYN5_HELAN (Putative transducin/WD40 repeat-like superfamily protein n=3 Tax=Heliantheae alliance TaxID=911341 RepID=A0A251TYN5_HELAN) HSP 1 Score: 124 bits (310), Expect = 1.170e-29 Identity = 78/253 (30.83%), Postives = 117/253 (46.25%), Query Frame = 1 Query: 7 IRLFDPISGGGAQVLQGHRGGCAALAWCPGQEFMLASGGEDGAVRFWDIRRPGTLLCLDDKNGNTLSSVPLT-----------ARLP----------------------------------LVSLTNATAHSACVTALHFLPDGVHLVTAAADKRVKLWDVLSAKNTRREFDLGARRLEFTRFARLSSSSDSRLLAVPVGAGVFLFDTLTNERLTDLEGHFDAVHAAAFNPNIQEMYTGGGDAVMQVWKPLSE 630 +RL D SG A L GHR G A+ W E++L +GG DGA+RFWDIRR G LD + PL AR P L S ATAH V L DG++L++A +D R++LWD+ S NT +++ RL+ ++ +L S DS ++ +P + FD + + L+GH++ V+ ++ + QE+YTGG D + +W PL + Sbjct: 171 VRLCDMASGAFAHTLSGHRDGVMAVEWSTSSEWILMTGGCDGAIRFWDIRRAGCFSVLDQSHSQLGRRPPLADKSTTKVSTSKARAPPRKVGSGSSSKHSGNSKIIKQTKGSAKQRLHPGLLTSQDRATAHYGAVLGLKATEDGMYLLSAGSDSRLRLWDIQSGCNTLVHYEIV--RLQSSKAIQLDVSQDSGVVFLPCMTSIKAFDMWSGKSKMTLQGHYENVNCCCYSSHDQELYTGGNDRQILIWSPLKQ 421 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig70652.16865.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig70652.16865.1 >prot_M-pyrifera_M_contig70652.16865.1 ID=prot_M-pyrifera_M_contig70652.16865.1|Name=mRNA_M-pyrifera_M_contig70652.16865.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=220bp MIRLFDPISGGGAQVLQGHRGGCAALAWCPGQEFMLASGGEDGAVRFWDIback to top mRNA from alignment at M-pyrifera_M_contig70652:271..1139+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig70652.16865.1 ID=mRNA_M-pyrifera_M_contig70652.16865.1|Name=mRNA_M-pyrifera_M_contig70652.16865.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=869bp|location=Sequence derived from alignment at M-pyrifera_M_contig70652:271..1139+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig70652:271..1139+ >mRNA_M-pyrifera_M_contig70652.16865.1 ID=mRNA_M-pyrifera_M_contig70652.16865.1|Name=mRNA_M-pyrifera_M_contig70652.16865.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1320bp|location=Sequence derived from alignment at M-pyrifera_M_contig70652:271..1139+ (Macrocystis pyrifera P11B4 male)back to top |