mRNA_M-pyrifera_M_contig70622.16860.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig70622.16860.1
Unique NamemRNA_M-pyrifera_M_contig70622.16860.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig70622.16860.1 vs. uniprot
Match: A0A482RQ99_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RQ99_9ARCH)

HSP 1 Score: 277 bits (709), Expect = 3.240e-88
Identity = 139/264 (52.65%), Postives = 180/264 (68.18%), Query Frame = 1
Query:    4 PMGACGPALRLTASHPAQTGAAWYARPQQVREGFVTEFVIRLSSPSFFCRSMDDAHTNCHSRGGDGIAFVIQNHHPSAMGRGGKGMGFEGVRNSVAVELDTWFNSEKRDLWENHVAVLSRGARRANSANHSFALGES-TTHVPDLTDGLHRVRIVYDPHFDPRIVSFPTFAASAPATSRWLPQSHLPSEYLAHTPANWVRDGFGSLAVFFDGSDLPALIVPINLAATIDLSSSHGRAWVGFTAATGNDVYQTHDILDWTFTQLR 792
            P   CGP LRLT +HP QTGAAWY R QQVREGF T F+ R+SSPS  CR MDD +T+C SRG  G AFV+Q  HP+AMGRG +G+G+  +RNSVA+E DT  ++   +  ENHV+V +RGA   NSA+HSF+LG + T  +PDL +G+H  RIVY P +DP ++  P F  S+P  + +   +    EY +     W   G   ++V+ +    P LIVPINL AT+D++ SHGRAWVGFTAATG +++QTHDIL W FTQLR
Sbjct:  164 PTAPCGPILRLTGAHPDQTGAAWYGRAQQVREGFDTTFLFRMSSPSRVCRYMDDMYTHCRSRGAGGFAFVVQAWHPTAMGRGYEGLGYADIRNSVAIEFDTNADAGLYEPHENHVSVHTRGAAAGNSASHSFSLGATRTAKLPDLAEGIHTARIVYQPVWDPAVLESPAFDISSPLVAHFFTNA----EYASGGLPQWSA-GLELISVYVNDDTQPVLIVPINLRATLDIAGSHGRAWVGFTAATGENMWQTHDILAWQFTQLR 422          
BLAST of mRNA_M-pyrifera_M_contig70622.16860.1 vs. uniprot
Match: K3X417_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X417_GLOUD)

HSP 1 Score: 253 bits (646), Expect = 2.170e-79
Identity = 132/271 (48.71%), Postives = 173/271 (63.84%), Query Frame = 1
Query:    1 PPMGACGPALRLTASHPAQTGAAWYARPQQVREGFVTEFVIRLSSPSFFCRSMDDAHTNCHSRGGDGIAFVIQNHHPSAMGRGGKGMGFEGVRNSVAVELDTWFNSEKRDLWENHVAVLSRGARRANS--ANHSFALGESTTHVPDLTDGLHRVRIVYDPHFDPRIVSFPTFAASAPATSRWLPQSHLPSEYLAHTPAN--WVRDGFGSLAVFFDGSDLPALIVPINLAATIDLSSSHGRAWVGFTAATGNDVYQTHDILDWTFTQLRRRL 801
            P  G CGPALRLT+SH   TG+AWY R   VREGF T F +R+S+PS FC++MDD +TNC SRGGDG AFV+QN H  A+G GG  +G+ G+RN++AVE DTWFN E+ D++ENHV+V + G    N   ANH++ALG +T+++ DLTDG H ++I YDP  D   + F     +A               Y  H  A+  W   G G L+VF    + P + VP+ +  TI+L   HGRAWVGFTA+TG   +QTHDIL W+F  LRR +
Sbjct:  111 PVTGGCGPALRLTSSHSFLTGSAWYPRQMNVREGFETTFTLRISNPSTFCKNMDDVYTNCRSRGGDGFAFVVQNDHELAIGDGGMELGYGGLRNALAVEFDTWFNYEQLDVYENHVSVHASGKSEVNEVRANHTYALG-ATSNILDLTDGQHLIKIRYDPILDDDSMLFADHFVAA--------------TYAGHFFASGGWAS-GVGVLSVFVGNMETPIMSVPLRIDDTIELE--HGRAWVGFTASTGETAWQTHDILSWSFESLRRNV 363          
BLAST of mRNA_M-pyrifera_M_contig70622.16860.1 vs. uniprot
Match: A0A5D6XZ69_9STRA (Fibronectin type-III domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XZ69_9STRA)

HSP 1 Score: 263 bits (671), Expect = 9.470e-79
Identity = 139/268 (51.87%), Postives = 173/268 (64.55%), Query Frame = 1
Query:    1 PPMGACGPALRLTASHPAQTGAAWYARPQQVREGFVTEFVIRLSSPSFFCRSMDDAHTNCHSRGGDGIAFVIQNHHPSAMGRGGKGMGFEGVRNSVAVELDTWFNSEKRDLWENHVAVLSRGARRANSANHSFALGESTTHVPDLTDGLHRVRIVYDPHFDPRIVSFPTFAASAPATSRWLPQSHLPSEYLAHTPANWVRDGFGSLAVFFDGSDLPALIVPINLAATIDLSSSHGRAWVGFTAATGNDVYQTHDILDWTFTQLRRRLP 804
            P   ACGPALRLTAS    TG+AWY RP  VREGF T F  RLS+PS FC+ MDD  T+C SRGGDG AFV+QN     +G GG+ +G+ G+RN++AVE DTW+N E+ D++ENH++V       A  ANH+FALG +T+++PDL DG H VRIVYDP  D  ++    F AS  A             + A    +W R G GSLAVF D  D P + VP+ L  ++ L   HGRA+VGFTAATG   +QTHDIL W FT LRRR+P
Sbjct:  545 PVSSACGPALRLTASDSLLTGSAWYPRPMNVREGFATSFAFRLSNPSTFCKVMDDVFTSCRSRGGDGFAFVVQNDAAIGVGSGGRELGYGGLRNALAVEFDTWYNPEQLDVFENHISVHVSDGPAAVQANHTFALG-ATSNLPDLADGDHSVRIVYDPVLDDDMIFTDHFVASTFA-----------GRFFAS--GDW-RAGVGSLAVFLDNMDTPVVSVPLRLEHSVVLH--HGRAYVGFTAATGESAWQTHDILQWQFTSLRRRVP 795          
BLAST of mRNA_M-pyrifera_M_contig70622.16860.1 vs. uniprot
Match: T0R3T2_SAPDV (Fibronectin type-III domain-containing protein n=2 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0R3T2_SAPDV)

HSP 1 Score: 245 bits (626), Expect = 4.930e-73
Identity = 128/258 (49.61%), Postives = 164/258 (63.57%), Query Frame = 1
Query:    4 PMGACGPALRLTASHPAQTGAAWYARPQQVREGFVTEFVIRLSSPSFFCRSMDDAHTNCHSRGGDGIAFVIQNHHPSAMGRGGKGMGFEGVRNSVAVELDTWFNSEKRDLWENHVAVLSRGARRANSANHSFALGESTTHVPDLTDGLHRVRIVYDPHFDPRIVSFPTFAASAPATSRWLPQSHLPSEYLAHTPANWVRDGFGSLAVFFDGSDLPALIVPINLAATIDLSSSHGRAWVGFTAATGNDVYQTHDILDWT 777
            P+  CGPALRLT S P  TGAAWY RP  V EGF T F +R+S+PSF CR MDD  T+C SRGGDG+AFV+Q  + S +GRGG G+G+ G+ N+++VE DTW+N +  D +ENHV+V +RG    NSA+H+F+LG +TT +PDLTDG H V I Y P     +   P F                PS Y++    +W   G G LA+  DG D+  L VP++L AT+ L    GRA+VGFTAATG   +Q HDIL WT
Sbjct:  445 PLPPCGPALRLTGSAPYLTGAAWYPRPMTVSEGFSTTFALRISNPSFHCRFMDDVSTHCRSRGGDGLAFVLQGVNTSVVGRGGAGLGYAGLENALSVEFDTWYNDDLADAYENHVSVQTRGFSSPNSAHHAFSLG-ATTAIPDLTDGSHVVTITYTPWLTTDMAFAPHFQ---------------PSAYVSQLLPHWNTLGLGCLAITLDGLDV--LSVPLHLEATLQLGMG-GRAYVGFTAATGAAAWQVHDILSWT 683          
BLAST of mRNA_M-pyrifera_M_contig70622.16860.1 vs. uniprot
Match: A0A1V9ZF18_9STRA (Fibronectin type-III domain-containing protein n=2 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZF18_9STRA)

HSP 1 Score: 246 bits (628), Expect = 1.460e-72
Identity = 136/265 (51.32%), Postives = 176/265 (66.42%), Query Frame = 1
Query:    1 PPMGACGPALRLTASHPAQTGAAWYARPQQVREGFVTEFVIRLSSPSFFCRSMDDAHTNCHSRGGDGIAFVIQNHHPSAMGRGGKGMGFEGVRNSVAVELDTW-FNSEKRDLWENHVAVLSRGARRANSANHSFALGESTTHVPDLTDGLHRVRIVYDPHFDPRIVSFPTFAASAPATSRWLPQSHLPSEYLAHTPANWVRDGFGSLAVFFDGSDLPALIVPINLAATIDLSSSHGRAWVGFTAATGNDVYQTHDILDWTFTQLR 792
            P + ACGPALRLT S P  TGAAWY RPQ VREGF T F  R+S+PSF C+ MDD  T C SRGGDG AFV+QN   + +GRGG G+G++G+ N++++E DT  +N E  D +ENHV+V +RGA  A SA+HSF+LG +TT VPDLTDG+H V I Y P   P +V    FA      + + P +++ S+  A +  +W   G G L+V  DG  L  L VPI+L AT+ L++  GRA+VGFTAATG D +Q HD+L W F   R
Sbjct:  544 PSLPACGPALRLTGSAPFLTGAAWYPRPQTVREGFATMFTFRISNPSFHCKFMDDVATYCRSRGGDGFAFVLQNVDETVIGRGGSGLGYDGLLNALSIEFDTCRYNPELLDAYENHVSVHTRGAATAASAHHSFSLG-ATTQVPDLTDGVHTVTIQYLPTLTPAMV----FA------NHFQPSAYI-SQLFASSTMDWSTIGVGCLSVEVDG--LVVLSVPIHLDATLQLTA--GRAFVGFTAATGADTWQVHDVLSWAFDSWR 792          
BLAST of mRNA_M-pyrifera_M_contig70622.16860.1 vs. uniprot
Match: A0A6G0W568_9STRA (Fibronectin type-III domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W568_9STRA)

HSP 1 Score: 243 bits (619), Expect = 3.290e-71
Identity = 133/269 (49.44%), Postives = 172/269 (63.94%), Query Frame = 1
Query:    4 PMGACGPALRLTASHPAQTGAAWYARPQQVREGFVTEFVIRLSSPSFFCRSMDDAHTNCHSRGGDGIAFVIQNHHPSAMGRGGKGMGFEGVRNSVAVELDTWFNSEKRDLWENHVAVLSRGARRANSANHSFALGESTTHVPDLTDGLHRVRIVYDPHFDPRIVSFPTFAASAPATSRWLPQSHLPSEYLAHTPANWVRDGFGSLAVFFDGSDLPALIVPINLAATIDLSSSHGRAWVGFTAATGNDVYQTHDILDWTFTQLRRRLPHE 810
            P  ACGP+LRLT S P  TGAAWY RP  VREGF T F  R+S+PSF C++MDD  T+C +RGGDG AFV+QN    AMG GG  +G+  + NS++VE DT +N E  DL+ENH++V +RG   ANS +HS++LG +T+ +PDLTDG+H VRI Y P+ D      P F A+A     ++ Q    SE  + T   W   G G L + FD  D P L VPI+L AT+ L+   GRA+VGFTAATG   +Q HDI+ W    LR   P++
Sbjct:  538 PAKACGPSLRLTGSAPFLTGAAWYPRPLNVREGFDTTFKYRISNPSFDCKNMDDVATHCRARGGDGFAFVVQNVGQEAMGEGGFHLGYGDIPNSLSVEFDTTYNPEMLDLYENHISVHTRGYDVANSGDHSYSLG-ATSQIPDLTDGIHSVRIRYVPYLDDDQPFHPYFQATA-----YVSQFLAASEEDSATHILWYTAGLGCLTIDFD--DRPVLSVPIHLDATLRLTG--GRAFVGFTAATGEKAWQVHDIVSWQIDSLRILPPNQ 796          
BLAST of mRNA_M-pyrifera_M_contig70622.16860.1 vs. uniprot
Match: A0A2D4C2A4_PYTIN (Fibronectin type-III domain-containing protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C2A4_PYTIN)

HSP 1 Score: 241 bits (615), Expect = 1.420e-70
Identity = 129/264 (48.86%), Postives = 168/264 (63.64%), Query Frame = 1
Query:    1 PPMGACGPALRLTASHPAQTGAAWYARPQQVREGFVTEFVIRLSSPSFFCRSMDDAHTNCHSRGGDGIAFVIQNHHPSAMGRGGKGMGFEGVRNSVAVELDTWFNSEKRDLWENHVAVLSRGARRANSANHSFALGESTTHVPDLTDGLHRVRIVYDPHFDPRIVSFPTFAASAPATSRWLPQSHLPSEYLAHTPANWVRDGFGSLAVFFDGSDLPALIVPINLAATIDLSSSHGRAWVGFTAATGNDVYQTHDILDWTFTQLR 792
            P   +CGPALRLT S  + TG+AWY R   VREGF T F  ++SSPS FC+ MDD  T C SRGGDG AFV+QN +  A+G GG  +G+ G+  ++AVE D+W+N+E+ D++ENHV+V     R++   NH+++LG ST+++ DLTDG H VRI Y P  D + +    F AS            L  ++L  T  +W   G G L+VF D  + P L VP+ L   I+LS  HGRAWVGFTAATG + YQTHDIL WTF  LR
Sbjct:  555 PISASCGPALRLTTSATSLTGSAWYPRQMNVREGFETTFSFQISSPSTFCQIMDDVXTRCRSRGGDGFAFVVQNDNVIAVGSGGMELGYGGLXXALAVEFDSWYNAEQLDVYENHVSVHLSRRRQSLRGNHTYSLG-STSNIADLTDGQHXVRIRYTPTLDEQTLFTEAFTAST-----------LVGDFL--TRGDWSA-GLGMLSVFIDDLNSPVLAVPLRLEDAIELS--HGRAWVGFTAATGLNAYQTHDILSWTFESLR 801          
BLAST of mRNA_M-pyrifera_M_contig70622.16860.1 vs. uniprot
Match: A0A7S2F3Q9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F3Q9_9STRA)

HSP 1 Score: 229 bits (583), Expect = 5.340e-70
Identity = 122/259 (47.10%), Postives = 160/259 (61.78%), Query Frame = 1
Query:   16 CGPALRLTASHPAQTGAAWYARPQQVREGFVTEFVIRLSSPSFFCRSMDDAHTNCHSRGGDGIAFVIQNHHPSAMGRGGKGMGFEGVRNSVAVELDTWFNSEKRDLWENHVAVLSRGARRANSANHSFALGESTTHVPDLTDGLHRVRIVYDPHFDPRIVSFPTFAASAPATSRWLPQSHLPSEYLAHTPANWVRDGFGSLAVFFDGSDLPALIVPINLAATIDLSSSHGRAWVGFTAATGNDVYQTHDILDWTFTQLR 792
            CGPALRLT++ P  +G+ WY R Q VREGF T F  R++  S  C SMDD +T+C +RGGDG+AFVIQ   P A+G GG G+G+ G++NS+AVE DT+FN+E  + +ENHVAV +RG R  NSANHSFAL + T  V DL   +H  R+ Y P+     +   TF  +  A S +L  +    ++     A+W   G G L +F D    P +  P+NL   +DL   HGRAWVGFT +TG   YQT D+L W F  LR
Sbjct:   87 CGPALRLTSTAPRSSGSVWYPRRQNVREGFDTTFKFRIAEGSLRCNSMDDEYTHCRARGGDGLAFVIQGQSPRALGAGGAGLGYTGIKNSIAVEFDTFFNAELLEPYENHVAVHTRGYRHPNSANHSFALAD-TVEVGDLGRDVHTARVRYRPNLQLDTLFSETFQTTGQA-SHFLENA----DFANGGMADW-GTGMGQLEIFVDHMTNPVISTPLNLDGLLDLH--HGRAWVGFTGSTGYGTYQTTDLLTWHFRALR 336          
BLAST of mRNA_M-pyrifera_M_contig70622.16860.1 vs. uniprot
Match: A0A1W0A7J6_9STRA (Fibronectin type-III domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A7J6_9STRA)

HSP 1 Score: 238 bits (608), Expect = 9.650e-70
Identity = 122/263 (46.39%), Postives = 168/263 (63.88%), Query Frame = 1
Query:    4 PMGACGPALRLTASHPAQTGAAWYARPQQVREGFVTEFVIRLSSPSFFCRSMDDAHTNCHSRGGDGIAFVIQNHHPSAMGRGGKGMGFEGVRNSVAVELDTWFNSEKRDLWENHVAVLSRGARRANSANHSFALGESTTHVPDLTDGLHRVRIVYDPHFDPRIVSFPTFAASAPATSRWLPQSHLPSEYLAHTPANWVRDGFGSLAVFFDGSDLPALIVPINLAATIDLSSSHGRAWVGFTAATGNDVYQTHDILDWTFTQLR 792
            P+  CGPALRLT S P  TGA WY R   VREGF T F  RLS+PSF C+ MDD  T+C SRGGDG AFVIQN   S +G GG G+G+ G+ NS+ +E DTW+N +  D +ENH++V +RG   + S++HS++LG +TT +PDLTDG++ V+I+Y P+F P +     F  S              S+YL     NW  +G G L++  + ++L  L VP+++   + L++  GRA++GFT ATG   +Q HDIL+WTF  LR
Sbjct:  534 PLPLCGPALRLTGSFPYLTGAVWYPRGMNVREGFTTTFAFRLSNPSFHCKIMDDVATHCRSRGGDGFAFVIQNVDTSQIGNGGSGLGYAGMANSLTIEFDTWYNPDLLDRYENHISVQTRGPSASISSHHSYSLG-ATTEIPDLTDGIYNVKIMYTPYFTPDMAFKHHFQPSVYV-----------SQYL--DSGNWSVNGLGCLSI--ELNNLTVLSVPLHIDQVVQLTTG-GRAFLGFTGATGASTWQVHDILNWTFNSLR 779          
BLAST of mRNA_M-pyrifera_M_contig70622.16860.1 vs. uniprot
Match: A0A024U3C0_9STRA (Fibronectin type-III domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U3C0_9STRA)

HSP 1 Score: 238 bits (607), Expect = 2.220e-69
Identity = 127/264 (48.11%), Postives = 168/264 (63.64%), Query Frame = 1
Query:    1 PPMGACGPALRLTASHPAQTGAAWYARPQQVREGFVTEFVIRLSSPSFFCRSMDDAHTNCHSRGGDGIAFVIQNHHPSAMGRGGKGMGFEGVRNSVAVELDTWFNSEKRDLWENHVAVLSRGARRANSANHSFALGESTTHVPDLTDGLHRVRIVYDPHFDPRIVSFPTFAASAPATSRWLPQSHLPSEYLAHTPANWVRDGFGSLAVFFDGSDLPALIVPINLAATIDLSSSHGRAWVGFTAATGNDVYQTHDILDWTFTQLR 792
            P M +CGPAL+LT S P  TGAAWY RPQ VREGF T F  RLS+PS  C+ MDD  T+C +RGGDG AFVIQN   +A+GRGG  +G+ G+RN+VA+E DTW+N +  D++ENHV++ +RG  + NSA+H++++G ST+ V DL+DG+H V I YDP  D  +   P F ASA  +  +  Q      +       W   G G L V  D  D   + VP++L  T+DL+   GRA+VGFTAAT    +Q HDIL W +   R
Sbjct:  555 PAMRSCGPALQLTGSAPFLTGAAWYPRPQNVREGFTTTFQFRLSNPSVHCKFMDDVSTHCRARGGDGFAFVIQNQDGTAIGRGGADVGYGGIRNAVAIEFDTWYNPDVVDVYENHVSIHTRGRMQPNSAHHAYSVG-STSQVVDLSDGVHTVTIRYDPVLDDDMPFAPHFQASAYVSEFFAAQGGSSRPW-------WGTAGVGCLQVTID--DRTVVSVPMHLDNTLDLTG--GRAFVGFTAATSETAWQVHDILSWRWRSTR 806          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig70622.16860.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A482RQ99_9ARCH3.240e-8852.65Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
K3X417_GLOUD2.170e-7948.71Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A5D6XZ69_9STRA9.470e-7951.87Fibronectin type-III domain-containing protein n=1... [more]
T0R3T2_SAPDV4.930e-7349.61Fibronectin type-III domain-containing protein n=2... [more]
A0A1V9ZF18_9STRA1.460e-7251.32Fibronectin type-III domain-containing protein n=2... [more]
A0A6G0W568_9STRA3.290e-7149.44Fibronectin type-III domain-containing protein n=1... [more]
A0A2D4C2A4_PYTIN1.420e-7048.86Fibronectin type-III domain-containing protein (Fr... [more]
A0A7S2F3Q9_9STRA5.340e-7047.10Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A1W0A7J6_9STRA9.650e-7046.39Fibronectin type-III domain-containing protein n=1... [more]
A0A024U3C0_9STRA2.220e-6948.11Fibronectin type-III domain-containing protein n=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig70622contigM-pyrifera_M_contig70622:39..851 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score255.0
Seed ortholog evalue3.9e-65
Seed eggNOG ortholog115417.EPrPW00000024687
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Legume lectin domain
EggNOG OGs1MCZ1@121069,28KFE@1,2QSWE@2759
COG Functional cat.S
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
Exons1
Model size813
Cds size807
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816599.458404-CDS-M-pyrifera_M_contig70622:38..8451622816599.458404-CDS-M-pyrifera_M_contig70622:38..845Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig70622 39..845 -
1692278069.789265-CDS-M-pyrifera_M_contig70622:38..8451692278069.789265-CDS-M-pyrifera_M_contig70622:38..845Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig70622 39..845 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816599.4707303-UTR-M-pyrifera_M_contig70622:845..8511622816599.4707303-UTR-M-pyrifera_M_contig70622:845..851Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig70622 846..851 -
1692278069.8027074-UTR-M-pyrifera_M_contig70622:845..8511692278069.8027074-UTR-M-pyrifera_M_contig70622:845..851Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig70622 846..851 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig70622.16860.1prot_M-pyrifera_M_contig70622.16860.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig70622 39..845 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig70622.16860.1

>prot_M-pyrifera_M_contig70622.16860.1 ID=prot_M-pyrifera_M_contig70622.16860.1|Name=mRNA_M-pyrifera_M_contig70622.16860.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=269bp
MGACGPALRLTASHPAQTGAAWYARPQQVREGFVTEFVIRLSSPSFFCRS
MDDAHTNCHSRGGDGIAFVIQNHHPSAMGRGGKGMGFEGVRNSVAVELDT
WFNSEKRDLWENHVAVLSRGARRANSANHSFALGESTTHVPDLTDGLHRV
RIVYDPHFDPRIVSFPTFAASAPATSRWLPQSHLPSEYLAHTPANWVRDG
FGSLAVFFDGSDLPALIVPINLAATIDLSSSHGRAWVGFTAATGNDVYQT
HDILDWTFTQLRRRLPHE*
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mRNA from alignment at M-pyrifera_M_contig70622:39..851-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig70622.16860.1 ID=mRNA_M-pyrifera_M_contig70622.16860.1|Name=mRNA_M-pyrifera_M_contig70622.16860.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=813bp|location=Sequence derived from alignment at M-pyrifera_M_contig70622:39..851- (Macrocystis pyrifera P11B4 male)
CCACCAATGGGAGCCTGTGGGCCTGCTTTACGCCTGACTGCATCACACCC TGCACAAACTGGTGCTGCATGGTATGCACGACCACAACAAGTTCGAGAAG GATTTGTTACAGAATTTGTCATTCGACTCTCCTCCCCATCTTTCTTCTGT CGTTCTATGGACGATGCACATACGAATTGCCATTCACGTGGTGGAGATGG CATAGCTTTTGTCATTCAAAACCACCACCCCTCCGCTATGGGGCGAGGTG GAAAAGGAATGGGGTTTGAAGGAGTTCGAAATTCTGTTGCAGTTGAATTG GATACTTGGTTCAATTCTGAAAAGAGAGACTTGTGGGAGAACCATGTTGC GGTGCTATCTCGTGGTGCACGACGTGCCAATTCAGCAAATCATTCCTTTG CTTTGGGAGAGTCAACCACTCATGTTCCAGATCTTACTGATGGGCTTCAT CGCGTTCGAATTGTGTATGATCCACATTTTGATCCAAGAATTGTGTCATT CCCCACATTTGCAGCTTCTGCTCCAGCCACTTCAAGATGGCTTCCACAAT CCCACCTACCTTCAGAATATCTCGCACATACACCAGCCAATTGGGTTCGT GATGGATTTGGCTCCCTTGCTGTCTTCTTCGATGGCTCGGACCTTCCAGC TCTTATTGTCCCAATCAACCTTGCAGCCACAATAGATCTTTCTTCTTCCC ATGGACGTGCATGGGTTGGTTTCACTGCAGCAACTGGAAATGATGTTTAC CAAACACACGACATCCTTGACTGGACCTTTACACAACTCCGAAGACGTCT TCCGCATGAGTAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig70622:39..851-

>mRNA_M-pyrifera_M_contig70622.16860.1 ID=mRNA_M-pyrifera_M_contig70622.16860.1|Name=mRNA_M-pyrifera_M_contig70622.16860.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1614bp|location=Sequence derived from alignment at M-pyrifera_M_contig70622:39..851- (Macrocystis pyrifera P11B4 male)
ATGGGAGCCTGTGGGCCTGCTTTACGCCTGACTGCATCACACCCTGCACA
AACTGGTGCTGCATGGTATGCACGACCACAACAAGTTCGAGAAGGATTTG
TTACAGAATTTGTCATTCGACTCTCCTCCCCATCTTTCTTCTGTCGTTCT
ATGGACGATGCACATACGAATTGCCATTCACGTGGTGGAGATGGCATAGC
TTTTGTCATTCAAAACCACCACCCCTCCGCTATGGGGCGAGGTGGAAAAG
GAATGGGGTTTGAAGGAGTTCGAAATTCTGTTGCAGTTGAATTGGATACT
TGGTTCAATTCTGAAAAGAGAGACTTGTGGGAGAACCATGTTGCGGTGCT
ATCTCGTGGTGCACGACGTGCCAATTCAGCAAATCATTCCTTTGCTTTGG
GAGAGTCAACCACTCATGTTCCAGATCTTACTGATGGGCTTCATCGCGTT
CGAATTGTGTATGATCCACATTTTGATCCAAGAATTGTGTCATTCCCCAC
ATTTGCAGCTTCTGCTCCAGCCACTTCAAGATGGCTTCCACAATCCCACC
TACCTTCAGAATATCTCGCACATACACCAGCCAATTGGGTTCGTGATGGA
TTTGGCTCCCTTGCTGTCTTCTTCGATGGCTCGGACCTTCCAGCTCTTAT
TGTCCCAATCAACCTTGCAGCCACAATAGATCTTTCTTCTTCCCATGGAC
GTGCATGGGTTGGTTTCACTGCAGCAACTGGAAATGATGTTTACCAAACA
CACGACATCCTTGACTGGACCTTTACACAACTCCGAAGACGTCTTCCGCA
TGAGTAAATGGGAGCCTGTGGGCCTGCTTTACGCCTGACTGCATCACACC
CTGCACAAACTGGTGCTGCATGGTATGCACGACCACAACAAGTTCGAGAA
GGATTTGTTACAGAATTTGTCATTCGACTCTCCTCCCCATCTTTCTTCTG
TCGTTCTATGGACGATGCACATACGAATTGCCATTCACGTGGTGGAGATG
GCATAGCTTTTGTCATTCAAAACCACCACCCCTCCGCTATGGGGCGAGGT
GGAAAAGGAATGGGGTTTGAAGGAGTTCGAAATTCTGTTGCAGTTGAATT
GGATACTTGGTTCAATTCTGAAAAGAGAGACTTGTGGGAGAACCATGTTG
CGGTGCTATCTCGTGGTGCACGACGTGCCAATTCAGCAAATCATTCCTTT
GCTTTGGGAGAGTCAACCACTCATGTTCCAGATCTTACTGATGGGCTTCA
TCGCGTTCGAATTGTGTATGATCCACATTTTGATCCAAGAATTGTGTCAT
TCCCCACATTTGCAGCTTCTGCTCCAGCCACTTCAAGATGGCTTCCACAA
TCCCACCTACCTTCAGAATATCTCGCACATACACCAGCCAATTGGGTTCG
TGATGGATTTGGCTCCCTTGCTGTCTTCTTCGATGGCTCGGACCTTCCAG
CTCTTATTGTCCCAATCAACCTTGCAGCCACAATAGATCTTTCTTCTTCC
CATGGACGTGCATGGGTTGGTTTCACTGCAGCAACTGGAAATGATGTTTA
CCAAACACACGACATCCTTGACTGGACCTTTACACAACTCCGAAGACGTC
TTCCGCATGAGTAA
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