mRNA_M-pyrifera_M_contig70617.16854.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig70617.16854.1
Unique NamemRNA_M-pyrifera_M_contig70617.16854.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig70617.16854.1 vs. uniprot
Match: A0A2E8LD05_9ACTN (Pirin n=11 Tax=Actinobacteria TaxID=201174 RepID=A0A2E8LD05_9ACTN)

HSP 1 Score: 368 bits (944), Expect = 4.020e-125
Identity = 172/252 (68.25%), Postives = 203/252 (80.56%), Query Frame = 1
Query:    4 GLVDHADSLGATARFGEGDTQWMTAGSGVQHSEMFPLTRTDRDNPLEMFQTWLNLPASDKMVDAYFTMLWSDQTPRHTATDAAGNTAEITVIAGSLGDHQGPTPPPNSWASKPEADVAIWHIRLAPNARWTLPRATGAETMRMLYAFEGSDVRIGDHEPIEAGTGAQLRADVDVELVAGADGIDCMLLQGRPIAEPVARYGPFVMNTEDEIQEAFADYRSTQFGGWPWPSPMPHHGVESERFAIHADGRRED 759
            GL+DHADS+GATARFG GDTQWMTAG GVQH EMFPL   D  N  E+FQ WLNLPA+DKMV+ YFTMLW+++TP+    D AG T+EITVIAGSLG+   PTPPPNSWASKP+AD+A+WHIR+    RWTLP+A  AET+R+LYAFEGS V+IG   P+ A TGA + +D D+ELVAG  GI+ MLLQGRPI EPVA++GPFVMNT  EI +AF DYR T+FGGWPWPSP P+H  ++ RFAIHADGRRED
Sbjct:   92 GLIDHADSMGATARFGHGDTQWMTAGKGVQHCEMFPLVNKDSGNLGELFQIWLNLPAADKMVNPYFTMLWNERTPKVRIVDDAGATSEITVIAGSLGETAAPTPPPNSWASKPDADLAVWHIRIEAGGRWTLPQAKNAETLRVLYAFEGSSVQIGTANPVGALTGAAIVSDRDLELVAGDGGIEMMLLQGRPIGEPVAQHGPFVMNTRAEIVQAFEDYRRTEFGGWPWPSPDPNHDPDAGRFAIHADGRRED 343          
BLAST of mRNA_M-pyrifera_M_contig70617.16854.1 vs. uniprot
Match: A0A2E0EJD3_9ACTN (Pirin n=3 Tax=Actinobacteria TaxID=201174 RepID=A0A2E0EJD3_9ACTN)

HSP 1 Score: 342 bits (877), Expect = 4.910e-115
Identity = 164/255 (64.31%), Postives = 195/255 (76.47%), Query Frame = 1
Query:    4 GLVDHADSLGATARFGEGDTQWMTAGSGVQHSEMFPLTRTDRDNPLEMFQTWLNLPASDKMVDAYFTMLWSDQTPRHTATDAAGN-TAEITVIAGSLGDHQGPTPPPNSWASKPEADVAIWHIRLAPNARWTLPRATGAETMRMLYAFEGSDVRIGDHEPIEAGTGAQLRADVDVELVAGADGIDCMLLQGRPIAEPVARYGPFVMNTEDEIQEAFADYRSTQFGGWPWPSPMPHHGVESERFAIHADGRREDVS 765
            G +DHADSLGATARFG+GDTQWMTAGSG+QH EMFPL   D  NPLE+FQ WLNLPASDKMVD YFTMLWS  TP           T  +TV+AG + D +   PPPNSWAS+ E DVAIWH+ + PN  + LP A    T RMLYAFEGS V IG  E I+AGTGA +++D ++EL AG+ GI+ M+LQGRPI EPVA++GPFVMNT+ EI++AF DY++TQFGGWPWP+  P+HG E +RFAIHADGRREDVS
Sbjct:   87 GYIDHADSLGATARFGKGDTQWMTAGSGIQHCEMFPLLNEDAPNPLELFQIWLNLPASDKMVDPYFTMLWSHVTPNEVIKXVESEGTVNLTVLAGQIRDLKPAAPPPNSWASRDEGDVAIWHLSMEPNTCFALPAADAGST-RMLYAFEGSTVAIGGTE-IDAGTGALIQSDKEIELSAGSGGIEIMILQGRPIREPVAQHGPFVMNTDREIEDAFRDYQATQFGGWPWPNKAPNHGTEPQRFAIHADGRREDVS 339          
BLAST of mRNA_M-pyrifera_M_contig70617.16854.1 vs. uniprot
Match: A0A524N7U5_9ACTN (Pirin family protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A524N7U5_9ACTN)

HSP 1 Score: 335 bits (858), Expect = 4.900e-112
Identity = 162/252 (64.29%), Postives = 189/252 (75.00%), Query Frame = 1
Query:    4 GLVDHADSLGATARFGEGDTQWMTAGSGVQHSEMFPLTRTDRDNPLEMFQTWLNLPASDKMVDAYFTMLWSDQTPRHTATDAA-GNTAEITVIAGSLGDHQGPTPPPNSWASKPEADVAIWHIRLAPNARWTLPRATGAETMRMLYAFEGSDVRIGDHEPIEAGTGAQLRADVDVELVAGADGIDCMLLQGRPIAEPVARYGPFVMNTEDEIQEAFADYRSTQFGGWPWPSPMPHHGVESERFAIHADGRRE 756
            G  DH+DSLGATARFG GDTQWMTA  G+ H EMFPL   D  NPLE+FQ WLNLPA+DKMV+ YFTMLWS +TP   A  +  G   +ITVIAGSL D   P+PPPNSWASK EADVAIWH+R    ARWT+P  TGA+T R+LYAF GS + + D E ++AG GA L +   +EL+AG DG++CM+LQGRPI EPVA+YGPFVMNT+ EIQ+AF DYR TQFGGWPW S  P+HG    RFA HADGR E
Sbjct:   87 GFCDHSDSLGATARFGRGDTQWMTAVKGIVHCEMFPLLDPDGPNPLELFQIWLNLPAADKMVEPYFTMLWSHETPTVIADPSNDGAIVDITVIAGSLADTDAPSPPPNSWASKAEADVAIWHLRFDAGARWTMPPTTGADTHRLLYAFSGSWLTVDD-ERLDAGNGAVLDSSRPLELIAGDDGVECMVLQGRPIGEPVAQYGPFVMNTQAEIQQAFEDYRRTQFGGWPWGSDDPNHGATPRRFARHADGRIE 337          
BLAST of mRNA_M-pyrifera_M_contig70617.16854.1 vs. uniprot
Match: A0A2E9XAI8_9ACTN (Pirin n=2 Tax=Actinobacteria TaxID=201174 RepID=A0A2E9XAI8_9ACTN)

HSP 1 Score: 332 bits (850), Expect = 6.150e-111
Identity = 161/255 (63.14%), Postives = 196/255 (76.86%), Query Frame = 1
Query:    4 GLVDHADSLGATARFGEGDTQWMTAGSGVQHSEMFPLTRTDRDNPLEMFQTWLNLPASDKMVDAYFTMLWSDQTPRHTATDAAGNTA-EITVIAGSLGDHQGPTPPPNSWASKPEADVAIWHIRLAPNARWTLPRATGAETMRMLYAFEGSDVRIGDHEPIEAGTGAQLRADVDVELVAGADGIDCMLLQGRPIAEPVARYGPFVMNTEDEIQEAFADYRSTQFGGWPWPSPMPHHGVESERFAIHADGRREDVS 765
            G VDHADSLGATARFGEGDTQWMTAGSG+QHSEMFPL   D  NPLE+FQ WLNLPA+DKMVD YFTMLWS  TP      A G  A ++TV+AG+L D +   PPP+SWAS+  +DVAIWH+ + P+ R+ LP A    ++R LYA+EGS V IG  E I AGTGA +R+D  +EL AG  GI+ ++LQGRPI EPVA+YGPFVMN++ EI++AF DY++TQFGGWPWP+  P+HG  + RFAIHADGR ED+S
Sbjct:   87 GFVDHADSLGATARFGEGDTQWMTAGSGIQHSEMFPLLEDDAPNPLELFQIWLNLPAADKMVDPYFTMLWSHVTPSEMIRGANGEGAVDLTVLAGNLRDLKPAAPPPDSWASRDRSDVAIWHLSMEPDTRFELPVAAEG-SIRALYAYEGSTVTIGTTE-IAAGTGALIRSDEIIELSAGPAGIEIIILQGRPIGEPVAQYGPFVMNSQSEIEDAFRDYQATQFGGWPWPNETPNHGTAARRFAIHADGRCEDIS 339          
BLAST of mRNA_M-pyrifera_M_contig70617.16854.1 vs. uniprot
Match: A0A7Y2GMM9_9ACTN (Pirin family protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2GMM9_9ACTN)

HSP 1 Score: 329 bits (844), Expect = 7.950e-110
Identity = 159/265 (60.00%), Postives = 189/265 (71.32%), Query Frame = 1
Query:    4 GLVDHADSLGATARFGEGDTQWMTAGSGVQHSEMFPLTRTDRDNPLEMFQTWLNLPASDKMVDAYFTMLWSDQTPRHTATDAAGNTAEITVIAGSLGDHQGPTPPPNSWASKPEADVAIWHIRLAPNARWTLPRAT-------------GAETMRMLYAFEGSDVRIGDHEPIEAGTGAQLRADVDVELVAGADGIDCMLLQGRPIAEPVARYGPFVMNTEDEIQEAFADYRSTQFGGWPWPSPMPHHGVESERFAIHADGRRED 759
            GL+DHADS+GATARFG GDTQWMTAG GVQH+EMFPL R D  NP E+FQ WLNLPA+DKMV+ YFTMLW++ TP     DA G   EITVIAG  GD     PPP+SWA+K EADVA+WH+     A  +LP A              G++T R+LY FEGS V I D E + AGTGA + A VD+ +VAG   +  M+LQGRPI EPVARYGPFVMNT DE+Q+AF DY++TQFGGWPWP   P+HG +  RFA+HADGR E+
Sbjct:   87 GLIDHADSMGATARFGRGDTQWMTAGRGVQHAEMFPLLRQDAPNPAELFQIWLNLPAADKMVEPYFTMLWAESTPTVIEKDADGRRCEITVIAGRFGDASATPPPPDSWAAKAEADVAVWHLDFEARAELSLPAADSXXXXXXXXXXXGGSDTQRVLYVFEGSSVTI-DGELVPAGTGALVDASVDLTIVAGDGPVGVMMLQGRPIGEPVARYGPFVMNTRDEVQQAFTDYQATQFGGWPWPDAAPNHGPDKGRFALHADGRVEN 350          
BLAST of mRNA_M-pyrifera_M_contig70617.16854.1 vs. uniprot
Match: A0A7Y1ZXF4_9ACTN (Pirin family protein n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A7Y1ZXF4_9ACTN)

HSP 1 Score: 328 bits (842), Expect = 1.650e-109
Identity = 159/259 (61.39%), Postives = 188/259 (72.59%), Query Frame = 1
Query:    4 GLVDHADSLGATARFGEGDTQWMTAGSGVQHSEMFPLTRTDRDNPLEMFQTWLNLPASDKMVDAYFTMLWSDQTPRHTATDAAGNTAEITVIAGSLGDHQG------PTPPPNSWASKPEADVAIWHIRLAPNARWTLPRATGAETMRMLYAFEGSDVRIGDHEPIEAGTGAQLRADVDVELVAGADGIDCMLLQGRPIAEPVARYGPFVMNTEDEIQEAFADYRSTQFGGWPWPSPMPHHGVESERFAIHADGRREDV 762
            G  DH+DSLGATARFG GDTQWMTAG+GV HSE+FPL    R NPLE+FQ WLNLPA+DK+VD YFTMLWS++TP   A DA G   +ITVIAG+     G      P PPPNSWA++ EADVAIWH+R    A WT+P A+G ET R+LYAF GS + + D E + AG GA +     VEL AG   ++C++LQGRPI EPVA+YGPFVMNTE EI+ AF DYR +QFGGWPWPS  PHHG    RFA+HADGR E +
Sbjct:   86 GCCDHSDSLGATARFGRGDTQWMTAGAGVVHSEVFPLLDAQRPNPLELFQIWLNLPAADKLVDPYFTMLWSERTPTIAAGDANGALVDITVIAGAPATTAGEDAVTPPAPPPNSWAARAEADVAIWHLRFDAGATWTMPAASGPETNRVLYAFSGSSIDV-DGESVAAGNGAVIDPRHAVELTAGDAEVECIVLQGRPIGEPVAQYGPFVMNTEAEIRAAFDDYRRSQFGGWPWPSDAPHHGPTRGRFALHADGRLETI 343          
BLAST of mRNA_M-pyrifera_M_contig70617.16854.1 vs. uniprot
Match: A0A3B9J4V2_9ACTN (Pirin n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3B9J4V2_9ACTN)

HSP 1 Score: 327 bits (837), Expect = 5.780e-109
Identity = 162/255 (63.53%), Postives = 191/255 (74.90%), Query Frame = 1
Query:    4 GLVDHADSLGATARFGEGDTQWMTAGSGVQHSEMFPLTRTDRDNPLEMFQTWLNLPASDKMVDAYFTMLWSDQTPRHTATDAAGNTA-EITVIAGSLGDHQGPTPPPNSWASKPEADVAIWHIRLAPNARWTLPRATGAETMRMLYAFEGSDVRIGDHEPIEAGTGAQLRADVDVELVAGADGIDCMLLQGRPIAEPVARYGPFVMNTEDEIQEAFADYRSTQFGGWPWPSPMPHHGVESERFAIHADGRREDVS 765
            G +DHADSLGATARFG+GDTQWMTAGSGVQH EMFPL   D +NPLE+FQ WLNLPASDKMV+ YFTMLWS  TP      A    A  +T +AG + D     PPPNSWAS  E  VAIWH+ + PNAR+ LP A  A + R LYAFEGS V IG  E I+AGTG  +RA+ ++EL AG+ GI+ M+LQGRPI EPVA+YGPFVMNTE EI++AF DY++TQFGGWPWP+  P+HG   +RFAIHADGR E +S
Sbjct:   87 GYIDHADSLGATARFGKGDTQWMTAGSGVQHCEMFPLINNDAENPLELFQIWLNLPASDKMVNPYFTMLWSHMTPTEIIKGANDRGAVSLTALAGPIRDLIPADPPPNSWASSDENHVAIWHLSMEPNARFGLP-AGDAASNRALYAFEGSTVVIGGTE-IDAGTGVLVRAEKEIELTAGSGGIEIMILQGRPIREPVAQYGPFVMNTEREIRDAFRDYQATQFGGWPWPNEEPNHGSIEQRFAIHADGRHEKIS 339          
BLAST of mRNA_M-pyrifera_M_contig70617.16854.1 vs. uniprot
Match: UPI0019A61249 (Pirin family protein n=1 Tax=Rhodoferax sp. TaxID=50421 RepID=UPI0019A61249)

HSP 1 Score: 324 bits (831), Expect = 6.970e-108
Identity = 154/259 (59.46%), Postives = 192/259 (74.13%), Query Frame = 1
Query:    1 QGLVDHADSLGATARFGEGDTQWMTAGSGVQHSEMFPLTRTDRDNPLEMFQTWLNLPASDKMVDAYFTMLWSDQTPRHTATDAAGNTAEITVIAGSLGDHQGPT----PPPNSWASKPEADVAIWHIRLAPNARWTLPRATGAETMRMLYAFEGSDVRIGDHEPIEAGTGAQLRADVDVELVAGADGIDCMLLQGRPIAEPVARYGPFVMNTEDEIQEAFADYRSTQFGGWPWPSPMPHHGVESERFAIHADGRREDVS 765
            +GL+DH+DSLGATARFG GD QW+TAG G+ HSEMFPL   D+ NPLE+FQ WLNLPAS KMV  +FTM WS+Q P H  TDA G   E+  IAG+L      T    PPP+SWAS+P+AD+AIW +++A NARWTLP A+GA T R LY F+G+ + +G  + +   TG +LR D DVELV G +  + ++LQGRPIAEPVA+YGPFVMNT+ EIQ+AFADY+ TQFGGWPWP   P HG ++ RFA HADG+ E +S
Sbjct:   87 KGLIDHSDSLGATARFGGGDVQWLTAGRGIVHSEMFPLLDRDQSNPLELFQIWLNLPASHKMVAPHFTMFWSEQVPHHHVTDANGAKTEVACIAGALHHATAGTQPLAPPPDSWASQPQADIAIWTLKMAANARWTLPAASGAGTRRSLYFFKGASLVVGG-QTVSGQTGMELRCDKDVELVNGPEFAELLVLQGRPIAEPVAQYGPFVMNTQAEIQQAFADYQRTQFGGWPWPDNAPVHGGQARRFAKHADGKNETLS 344          
BLAST of mRNA_M-pyrifera_M_contig70617.16854.1 vs. uniprot
Match: A0A4Q6A102_9DELT (Pirin family protein n=5 Tax=Myxococcaceae TaxID=31 RepID=A0A4Q6A102_9DELT)

HSP 1 Score: 324 bits (830), Expect = 8.120e-108
Identity = 154/251 (61.35%), Postives = 184/251 (73.31%), Query Frame = 1
Query:    4 GLVDHADSLGATARFGEGDTQWMTAGSGVQHSEMFPLTRTDRDNPLEMFQTWLNLPASDKMVDAYFTMLWSDQTPRHTATDAAGNTAEITVIAGSLGDHQGPTPPPNSWASKPEADVAIWHIRLAPNARWTLPRATGAETMRMLYAFEGSDVRIGDHEPIEAGTGAQLRADVDVELVAGADGIDCMLLQGRPIAEPVARYGPFVMNTEDEIQEAFADYRSTQFGGWPWPSPMPHHGVESERFAIHADGRRE 756
            GL+DH+DSLGA ARFGEGD QW+TAGSG+ HSEMFPL R+D+ NPLE+FQ WLNLP + K V+ +F+MLW+   PRH A DAAG   EITV+AG L D + P PPP SWA+  +ADVAIW ++L P A+WTLP A    T RMLY F GS +++G  + I      +LRADVDV L  GAD  + +LLQGRPI EPV +YGPFVMNT  EIQ+AFADY+ T FGGWPWP+P P HG E  RFA HADG  E
Sbjct:   94 GLIDHSDSLGAAARFGEGDVQWLTAGSGINHSEMFPLLRSDKPNPLELFQIWLNLPRASKHVEPHFSMLWNQAIPRHVAKDAAGRATEITVVAGRLDDVKAPPPPPKSWAAHADADVAIWTLKLEPGAKWTLPAAVKG-TNRMLYFFRGSTLKVGGRD-IPPSRAIELRADVDVALENGADVTELLLLQGRPIGEPVVQYGPFVMNTRQEIQQAFADYQRTGFGGWPWPNPDPVHGKEEGRFARHADGHVE 342          
BLAST of mRNA_M-pyrifera_M_contig70617.16854.1 vs. uniprot
Match: A0A7Y2IJ76_9ACTN (Pirin family protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2IJ76_9ACTN)

HSP 1 Score: 322 bits (824), Expect = 5.420e-107
Identity = 152/253 (60.08%), Postives = 182/253 (71.94%), Query Frame = 1
Query:    4 GLVDHADSLGATARFGEGDTQWMTAGSGVQHSEMFPLTRTDRDNPLEMFQTWLNLPASDKMVDAYFTMLWSDQTPRHTATDAAGNTAEITVIAGSLGDHQGPTPPPNSWASKPEADVAIWHIRLAPNARWTLPRATGAETMRMLYAFEGSDVRIGDHEPIEAGTGAQLRADVDVELVAGADGIDCMLLQGRPIAEPVARYGPFVMNTEDEIQEAFADYRSTQFGGWPWPSPMPHHG-VESERFAIHADGRRED 759
            G  DH DS+GA ARFGEGDTQW+T GSGV H+E+FPL   DR NPLE+FQ WLNLPA DKMV AYFTMLWS++TPR    D+ G  +EITVIAGS    QG  PPPNSWAS+ E+ + IWHI++   A   LP     +  R++Y F+GS + I D EP+++G GA LR+   V L AG D ++ M+LQG PI EPVARYGPFVMNTE EIQ+ F DY+ TQFGGWPWP   P+HG  E  RFA+HADG RED
Sbjct:   87 GFCDHTDSMGAAARFGEGDTQWVTTGSGVVHAELFPLIHNDRPNPLELFQIWLNLPAEDKMVPAYFTMLWSEETPRSNRIDSDGRRSEITVIAGSFDGQQGQAPPPNSWASQAESSIGIWHIKMDSGATMDLPPTDSDDVNRVIYVFDGSWIEI-DGEPVKSGNGAVLRSTAAVTLRAGEDAVEVMVLQGTPIGEPVARYGPFVMNTEAEIQQTFRDYQQTQFGGWPWPEDDPNHGGPEQGRFALHADGTRED 338          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig70617.16854.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E8LD05_9ACTN4.020e-12568.25Pirin n=11 Tax=Actinobacteria TaxID=201174 RepID=A... [more]
A0A2E0EJD3_9ACTN4.910e-11564.31Pirin n=3 Tax=Actinobacteria TaxID=201174 RepID=A0... [more]
A0A524N7U5_9ACTN4.900e-11264.29Pirin family protein n=1 Tax=Acidimicrobiales bact... [more]
A0A2E9XAI8_9ACTN6.150e-11163.14Pirin n=2 Tax=Actinobacteria TaxID=201174 RepID=A0... [more]
A0A7Y2GMM9_9ACTN7.950e-11060.00Pirin family protein n=1 Tax=Acidimicrobiales bact... [more]
A0A7Y1ZXF4_9ACTN1.650e-10961.39Pirin family protein n=1 Tax=Ilumatobacter sp. Tax... [more]
A0A3B9J4V2_9ACTN5.780e-10963.53Pirin n=1 Tax=Acidimicrobiaceae bacterium TaxID=20... [more]
UPI0019A612496.970e-10859.46Pirin family protein n=1 Tax=Rhodoferax sp. TaxID=... [more]
A0A4Q6A102_9DELT8.120e-10861.35Pirin family protein n=5 Tax=Myxococcaceae TaxID=3... [more]
A0A7Y2IJ76_9ACTN5.420e-10760.08Pirin family protein n=1 Tax=Acidimicrobiales bact... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig70617contigM-pyrifera_M_contig70617:3..770 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score317.0
Seed ortholog evalue8e-84
Seed eggNOG ortholog246197.MXAN_2232
KEGG koko:K06911
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Belongs to the pirin family
EggNOG OGs1MWIP@1224,2WQA0@28221,2YUHZ@29,42UHA@68525,COG1741@1,COG1741@2
COG Functional cat.S
Best tax levelMyxococcales
Best eggNOG OGNA|NA|NA
BRITEko00000
Exons1
Model size768
Cds size768
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816599.1546187-CDS-M-pyrifera_M_contig70617:2..7701622816599.1546187-CDS-M-pyrifera_M_contig70617:2..770Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig70617 3..770 +
1692278069.6252425-CDS-M-pyrifera_M_contig70617:2..7701692278069.6252425-CDS-M-pyrifera_M_contig70617:2..770Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig70617 3..770 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig70617.16854.1prot_M-pyrifera_M_contig70617.16854.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig70617 3..770 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig70617.16854.1

>prot_M-pyrifera_M_contig70617.16854.1 ID=prot_M-pyrifera_M_contig70617.16854.1|Name=mRNA_M-pyrifera_M_contig70617.16854.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=256bp
QGLVDHADSLGATARFGEGDTQWMTAGSGVQHSEMFPLTRTDRDNPLEMF
QTWLNLPASDKMVDAYFTMLWSDQTPRHTATDAAGNTAEITVIAGSLGDH
QGPTPPPNSWASKPEADVAIWHIRLAPNARWTLPRATGAETMRMLYAFEG
SDVRIGDHEPIEAGTGAQLRADVDVELVAGADGIDCMLLQGRPIAEPVAR
YGPFVMNTEDEIQEAFADYRSTQFGGWPWPSPMPHHGVESERFAIHADGR
REDVS*
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mRNA from alignment at M-pyrifera_M_contig70617:3..770+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig70617.16854.1 ID=mRNA_M-pyrifera_M_contig70617.16854.1|Name=mRNA_M-pyrifera_M_contig70617.16854.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=768bp|location=Sequence derived from alignment at M-pyrifera_M_contig70617:3..770+ (Macrocystis pyrifera P11B4 male)
CAGGGACTCGTCGACCATGCCGACTCACTCGGCGCCACCGCGCGGTTCGG CGAAGGCGACACGCAATGGATGACGGCTGGTTCCGGCGTGCAGCACTCCG AGATGTTCCCGCTCACGCGAACCGATCGAGACAACCCGCTCGAGATGTTC CAGACCTGGTTGAACCTGCCGGCCTCCGACAAGATGGTCGACGCCTACTT CACGATGCTGTGGAGTGATCAGACGCCGCGCCACACGGCCACCGACGCCG CCGGGAACACCGCCGAGATCACGGTGATCGCCGGGTCACTCGGCGACCAC CAGGGGCCCACCCCGCCGCCCAACTCCTGGGCGTCCAAGCCCGAGGCCGA CGTCGCCATCTGGCACATCCGTCTCGCGCCGAATGCCCGATGGACCCTGC CCCGTGCGACCGGTGCCGAAACCATGCGCATGCTCTACGCCTTCGAGGGC TCCGACGTGCGCATCGGCGACCACGAGCCCATCGAAGCGGGCACCGGCGC CCAGCTCCGTGCCGACGTCGATGTCGAACTCGTTGCCGGGGCCGACGGCA TCGACTGCATGCTCCTCCAGGGTCGGCCGATCGCGGAACCGGTCGCGCGC TACGGGCCGTTCGTGATGAACACCGAGGACGAGATCCAGGAAGCCTTCGC CGACTATCGCTCGACCCAGTTCGGTGGATGGCCGTGGCCCTCTCCCATGC CGCACCATGGTGTGGAGTCCGAGCGGTTCGCCATCCATGCCGACGGGCGG CGCGAGGACGTCAGCTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig70617:3..770+

>mRNA_M-pyrifera_M_contig70617.16854.1 ID=mRNA_M-pyrifera_M_contig70617.16854.1|Name=mRNA_M-pyrifera_M_contig70617.16854.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1536bp|location=Sequence derived from alignment at M-pyrifera_M_contig70617:3..770+ (Macrocystis pyrifera P11B4 male)
CAGGGACTCGTCGACCATGCCGACTCACTCGGCGCCACCGCGCGGTTCGG
CGAAGGCGACACGCAATGGATGACGGCTGGTTCCGGCGTGCAGCACTCCG
AGATGTTCCCGCTCACGCGAACCGATCGAGACAACCCGCTCGAGATGTTC
CAGACCTGGTTGAACCTGCCGGCCTCCGACAAGATGGTCGACGCCTACTT
CACGATGCTGTGGAGTGATCAGACGCCGCGCCACACGGCCACCGACGCCG
CCGGGAACACCGCCGAGATCACGGTGATCGCCGGGTCACTCGGCGACCAC
CAGGGGCCCACCCCGCCGCCCAACTCCTGGGCGTCCAAGCCCGAGGCCGA
CGTCGCCATCTGGCACATCCGTCTCGCGCCGAATGCCCGATGGACCCTGC
CCCGTGCGACCGGTGCCGAAACCATGCGCATGCTCTACGCCTTCGAGGGC
TCCGACGTGCGCATCGGCGACCACGAGCCCATCGAAGCGGGCACCGGCGC
CCAGCTCCGTGCCGACGTCGATGTCGAACTCGTTGCCGGGGCCGACGGCA
TCGACTGCATGCTCCTCCAGGGTCGGCCGATCGCGGAACCGGTCGCGCGC
TACGGGCCGTTCGTGATGAACACCGAGGACGAGATCCAGGAAGCCTTCGC
CGACTATCGCTCGACCCAGTTCGGTGGATGGCCGTGGCCCTCTCCCATGC
CGCACCATGGTGTGGAGTCCGAGCGGTTCGCCATCCATGCCGACGGGCGG
CGCGAGGACGTCAGCTGACAGGGACTCGTCGACCATGCCGACTCACTCGG
CGCCACCGCGCGGTTCGGCGAAGGCGACACGCAATGGATGACGGCTGGTT
CCGGCGTGCAGCACTCCGAGATGTTCCCGCTCACGCGAACCGATCGAGAC
AACCCGCTCGAGATGTTCCAGACCTGGTTGAACCTGCCGGCCTCCGACAA
GATGGTCGACGCCTACTTCACGATGCTGTGGAGTGATCAGACGCCGCGCC
ACACGGCCACCGACGCCGCCGGGAACACCGCCGAGATCACGGTGATCGCC
GGGTCACTCGGCGACCACCAGGGGCCCACCCCGCCGCCCAACTCCTGGGC
GTCCAAGCCCGAGGCCGACGTCGCCATCTGGCACATCCGTCTCGCGCCGA
ATGCCCGATGGACCCTGCCCCGTGCGACCGGTGCCGAAACCATGCGCATG
CTCTACGCCTTCGAGGGCTCCGACGTGCGCATCGGCGACCACGAGCCCAT
CGAAGCGGGCACCGGCGCCCAGCTCCGTGCCGACGTCGATGTCGAACTCG
TTGCCGGGGCCGACGGCATCGACTGCATGCTCCTCCAGGGTCGGCCGATC
GCGGAACCGGTCGCGCGCTACGGGCCGTTCGTGATGAACACCGAGGACGA
GATCCAGGAAGCCTTCGCCGACTATCGCTCGACCCAGTTCGGTGGATGGC
CGTGGCCCTCTCCCATGCCGCACCATGGTGTGGAGTCCGAGCGGTTCGCC
ATCCATGCCGACGGGCGGCGCGAGGACGTCAGCTGA
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