mRNA_M-pyrifera_M_contig70617.16854.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig70617.16854.1 vs. uniprot
Match: A0A2E8LD05_9ACTN (Pirin n=11 Tax=Actinobacteria TaxID=201174 RepID=A0A2E8LD05_9ACTN) HSP 1 Score: 368 bits (944), Expect = 4.020e-125 Identity = 172/252 (68.25%), Postives = 203/252 (80.56%), Query Frame = 1 Query: 4 GLVDHADSLGATARFGEGDTQWMTAGSGVQHSEMFPLTRTDRDNPLEMFQTWLNLPASDKMVDAYFTMLWSDQTPRHTATDAAGNTAEITVIAGSLGDHQGPTPPPNSWASKPEADVAIWHIRLAPNARWTLPRATGAETMRMLYAFEGSDVRIGDHEPIEAGTGAQLRADVDVELVAGADGIDCMLLQGRPIAEPVARYGPFVMNTEDEIQEAFADYRSTQFGGWPWPSPMPHHGVESERFAIHADGRRED 759 GL+DHADS+GATARFG GDTQWMTAG GVQH EMFPL D N E+FQ WLNLPA+DKMV+ YFTMLW+++TP+ D AG T+EITVIAGSLG+ PTPPPNSWASKP+AD+A+WHIR+ RWTLP+A AET+R+LYAFEGS V+IG P+ A TGA + +D D+ELVAG GI+ MLLQGRPI EPVA++GPFVMNT EI +AF DYR T+FGGWPWPSP P+H ++ RFAIHADGRRED Sbjct: 92 GLIDHADSMGATARFGHGDTQWMTAGKGVQHCEMFPLVNKDSGNLGELFQIWLNLPAADKMVNPYFTMLWNERTPKVRIVDDAGATSEITVIAGSLGETAAPTPPPNSWASKPDADLAVWHIRIEAGGRWTLPQAKNAETLRVLYAFEGSSVQIGTANPVGALTGAAIVSDRDLELVAGDGGIEMMLLQGRPIGEPVAQHGPFVMNTRAEIVQAFEDYRRTEFGGWPWPSPDPNHDPDAGRFAIHADGRRED 343
BLAST of mRNA_M-pyrifera_M_contig70617.16854.1 vs. uniprot
Match: A0A2E0EJD3_9ACTN (Pirin n=3 Tax=Actinobacteria TaxID=201174 RepID=A0A2E0EJD3_9ACTN) HSP 1 Score: 342 bits (877), Expect = 4.910e-115 Identity = 164/255 (64.31%), Postives = 195/255 (76.47%), Query Frame = 1 Query: 4 GLVDHADSLGATARFGEGDTQWMTAGSGVQHSEMFPLTRTDRDNPLEMFQTWLNLPASDKMVDAYFTMLWSDQTPRHTATDAAGN-TAEITVIAGSLGDHQGPTPPPNSWASKPEADVAIWHIRLAPNARWTLPRATGAETMRMLYAFEGSDVRIGDHEPIEAGTGAQLRADVDVELVAGADGIDCMLLQGRPIAEPVARYGPFVMNTEDEIQEAFADYRSTQFGGWPWPSPMPHHGVESERFAIHADGRREDVS 765 G +DHADSLGATARFG+GDTQWMTAGSG+QH EMFPL D NPLE+FQ WLNLPASDKMVD YFTMLWS TP T +TV+AG + D + PPPNSWAS+ E DVAIWH+ + PN + LP A T RMLYAFEGS V IG E I+AGTGA +++D ++EL AG+ GI+ M+LQGRPI EPVA++GPFVMNT+ EI++AF DY++TQFGGWPWP+ P+HG E +RFAIHADGRREDVS Sbjct: 87 GYIDHADSLGATARFGKGDTQWMTAGSGIQHCEMFPLLNEDAPNPLELFQIWLNLPASDKMVDPYFTMLWSHVTPNEVIKXVESEGTVNLTVLAGQIRDLKPAAPPPNSWASRDEGDVAIWHLSMEPNTCFALPAADAGST-RMLYAFEGSTVAIGGTE-IDAGTGALIQSDKEIELSAGSGGIEIMILQGRPIREPVAQHGPFVMNTDREIEDAFRDYQATQFGGWPWPNKAPNHGTEPQRFAIHADGRREDVS 339
BLAST of mRNA_M-pyrifera_M_contig70617.16854.1 vs. uniprot
Match: A0A524N7U5_9ACTN (Pirin family protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A524N7U5_9ACTN) HSP 1 Score: 335 bits (858), Expect = 4.900e-112 Identity = 162/252 (64.29%), Postives = 189/252 (75.00%), Query Frame = 1 Query: 4 GLVDHADSLGATARFGEGDTQWMTAGSGVQHSEMFPLTRTDRDNPLEMFQTWLNLPASDKMVDAYFTMLWSDQTPRHTATDAA-GNTAEITVIAGSLGDHQGPTPPPNSWASKPEADVAIWHIRLAPNARWTLPRATGAETMRMLYAFEGSDVRIGDHEPIEAGTGAQLRADVDVELVAGADGIDCMLLQGRPIAEPVARYGPFVMNTEDEIQEAFADYRSTQFGGWPWPSPMPHHGVESERFAIHADGRRE 756 G DH+DSLGATARFG GDTQWMTA G+ H EMFPL D NPLE+FQ WLNLPA+DKMV+ YFTMLWS +TP A + G +ITVIAGSL D P+PPPNSWASK EADVAIWH+R ARWT+P TGA+T R+LYAF GS + + D E ++AG GA L + +EL+AG DG++CM+LQGRPI EPVA+YGPFVMNT+ EIQ+AF DYR TQFGGWPW S P+HG RFA HADGR E Sbjct: 87 GFCDHSDSLGATARFGRGDTQWMTAVKGIVHCEMFPLLDPDGPNPLELFQIWLNLPAADKMVEPYFTMLWSHETPTVIADPSNDGAIVDITVIAGSLADTDAPSPPPNSWASKAEADVAIWHLRFDAGARWTMPPTTGADTHRLLYAFSGSWLTVDD-ERLDAGNGAVLDSSRPLELIAGDDGVECMVLQGRPIGEPVAQYGPFVMNTQAEIQQAFEDYRRTQFGGWPWGSDDPNHGATPRRFARHADGRIE 337
BLAST of mRNA_M-pyrifera_M_contig70617.16854.1 vs. uniprot
Match: A0A2E9XAI8_9ACTN (Pirin n=2 Tax=Actinobacteria TaxID=201174 RepID=A0A2E9XAI8_9ACTN) HSP 1 Score: 332 bits (850), Expect = 6.150e-111 Identity = 161/255 (63.14%), Postives = 196/255 (76.86%), Query Frame = 1 Query: 4 GLVDHADSLGATARFGEGDTQWMTAGSGVQHSEMFPLTRTDRDNPLEMFQTWLNLPASDKMVDAYFTMLWSDQTPRHTATDAAGNTA-EITVIAGSLGDHQGPTPPPNSWASKPEADVAIWHIRLAPNARWTLPRATGAETMRMLYAFEGSDVRIGDHEPIEAGTGAQLRADVDVELVAGADGIDCMLLQGRPIAEPVARYGPFVMNTEDEIQEAFADYRSTQFGGWPWPSPMPHHGVESERFAIHADGRREDVS 765 G VDHADSLGATARFGEGDTQWMTAGSG+QHSEMFPL D NPLE+FQ WLNLPA+DKMVD YFTMLWS TP A G A ++TV+AG+L D + PPP+SWAS+ +DVAIWH+ + P+ R+ LP A ++R LYA+EGS V IG E I AGTGA +R+D +EL AG GI+ ++LQGRPI EPVA+YGPFVMN++ EI++AF DY++TQFGGWPWP+ P+HG + RFAIHADGR ED+S Sbjct: 87 GFVDHADSLGATARFGEGDTQWMTAGSGIQHSEMFPLLEDDAPNPLELFQIWLNLPAADKMVDPYFTMLWSHVTPSEMIRGANGEGAVDLTVLAGNLRDLKPAAPPPDSWASRDRSDVAIWHLSMEPDTRFELPVAAEG-SIRALYAYEGSTVTIGTTE-IAAGTGALIRSDEIIELSAGPAGIEIIILQGRPIGEPVAQYGPFVMNSQSEIEDAFRDYQATQFGGWPWPNETPNHGTAARRFAIHADGRCEDIS 339
BLAST of mRNA_M-pyrifera_M_contig70617.16854.1 vs. uniprot
Match: A0A7Y2GMM9_9ACTN (Pirin family protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2GMM9_9ACTN) HSP 1 Score: 329 bits (844), Expect = 7.950e-110 Identity = 159/265 (60.00%), Postives = 189/265 (71.32%), Query Frame = 1 Query: 4 GLVDHADSLGATARFGEGDTQWMTAGSGVQHSEMFPLTRTDRDNPLEMFQTWLNLPASDKMVDAYFTMLWSDQTPRHTATDAAGNTAEITVIAGSLGDHQGPTPPPNSWASKPEADVAIWHIRLAPNARWTLPRAT-------------GAETMRMLYAFEGSDVRIGDHEPIEAGTGAQLRADVDVELVAGADGIDCMLLQGRPIAEPVARYGPFVMNTEDEIQEAFADYRSTQFGGWPWPSPMPHHGVESERFAIHADGRRED 759 GL+DHADS+GATARFG GDTQWMTAG GVQH+EMFPL R D NP E+FQ WLNLPA+DKMV+ YFTMLW++ TP DA G EITVIAG GD PPP+SWA+K EADVA+WH+ A +LP A G++T R+LY FEGS V I D E + AGTGA + A VD+ +VAG + M+LQGRPI EPVARYGPFVMNT DE+Q+AF DY++TQFGGWPWP P+HG + RFA+HADGR E+ Sbjct: 87 GLIDHADSMGATARFGRGDTQWMTAGRGVQHAEMFPLLRQDAPNPAELFQIWLNLPAADKMVEPYFTMLWAESTPTVIEKDADGRRCEITVIAGRFGDASATPPPPDSWAAKAEADVAVWHLDFEARAELSLPAADSXXXXXXXXXXXGGSDTQRVLYVFEGSSVTI-DGELVPAGTGALVDASVDLTIVAGDGPVGVMMLQGRPIGEPVARYGPFVMNTRDEVQQAFTDYQATQFGGWPWPDAAPNHGPDKGRFALHADGRVEN 350
BLAST of mRNA_M-pyrifera_M_contig70617.16854.1 vs. uniprot
Match: A0A7Y1ZXF4_9ACTN (Pirin family protein n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A7Y1ZXF4_9ACTN) HSP 1 Score: 328 bits (842), Expect = 1.650e-109 Identity = 159/259 (61.39%), Postives = 188/259 (72.59%), Query Frame = 1 Query: 4 GLVDHADSLGATARFGEGDTQWMTAGSGVQHSEMFPLTRTDRDNPLEMFQTWLNLPASDKMVDAYFTMLWSDQTPRHTATDAAGNTAEITVIAGSLGDHQG------PTPPPNSWASKPEADVAIWHIRLAPNARWTLPRATGAETMRMLYAFEGSDVRIGDHEPIEAGTGAQLRADVDVELVAGADGIDCMLLQGRPIAEPVARYGPFVMNTEDEIQEAFADYRSTQFGGWPWPSPMPHHGVESERFAIHADGRREDV 762 G DH+DSLGATARFG GDTQWMTAG+GV HSE+FPL R NPLE+FQ WLNLPA+DK+VD YFTMLWS++TP A DA G +ITVIAG+ G P PPPNSWA++ EADVAIWH+R A WT+P A+G ET R+LYAF GS + + D E + AG GA + VEL AG ++C++LQGRPI EPVA+YGPFVMNTE EI+ AF DYR +QFGGWPWPS PHHG RFA+HADGR E + Sbjct: 86 GCCDHSDSLGATARFGRGDTQWMTAGAGVVHSEVFPLLDAQRPNPLELFQIWLNLPAADKLVDPYFTMLWSERTPTIAAGDANGALVDITVIAGAPATTAGEDAVTPPAPPPNSWAARAEADVAIWHLRFDAGATWTMPAASGPETNRVLYAFSGSSIDV-DGESVAAGNGAVIDPRHAVELTAGDAEVECIVLQGRPIGEPVAQYGPFVMNTEAEIRAAFDDYRRSQFGGWPWPSDAPHHGPTRGRFALHADGRLETI 343
BLAST of mRNA_M-pyrifera_M_contig70617.16854.1 vs. uniprot
Match: A0A3B9J4V2_9ACTN (Pirin n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3B9J4V2_9ACTN) HSP 1 Score: 327 bits (837), Expect = 5.780e-109 Identity = 162/255 (63.53%), Postives = 191/255 (74.90%), Query Frame = 1 Query: 4 GLVDHADSLGATARFGEGDTQWMTAGSGVQHSEMFPLTRTDRDNPLEMFQTWLNLPASDKMVDAYFTMLWSDQTPRHTATDAAGNTA-EITVIAGSLGDHQGPTPPPNSWASKPEADVAIWHIRLAPNARWTLPRATGAETMRMLYAFEGSDVRIGDHEPIEAGTGAQLRADVDVELVAGADGIDCMLLQGRPIAEPVARYGPFVMNTEDEIQEAFADYRSTQFGGWPWPSPMPHHGVESERFAIHADGRREDVS 765 G +DHADSLGATARFG+GDTQWMTAGSGVQH EMFPL D +NPLE+FQ WLNLPASDKMV+ YFTMLWS TP A A +T +AG + D PPPNSWAS E VAIWH+ + PNAR+ LP A A + R LYAFEGS V IG E I+AGTG +RA+ ++EL AG+ GI+ M+LQGRPI EPVA+YGPFVMNTE EI++AF DY++TQFGGWPWP+ P+HG +RFAIHADGR E +S Sbjct: 87 GYIDHADSLGATARFGKGDTQWMTAGSGVQHCEMFPLINNDAENPLELFQIWLNLPASDKMVNPYFTMLWSHMTPTEIIKGANDRGAVSLTALAGPIRDLIPADPPPNSWASSDENHVAIWHLSMEPNARFGLP-AGDAASNRALYAFEGSTVVIGGTE-IDAGTGVLVRAEKEIELTAGSGGIEIMILQGRPIREPVAQYGPFVMNTEREIRDAFRDYQATQFGGWPWPNEEPNHGSIEQRFAIHADGRHEKIS 339
BLAST of mRNA_M-pyrifera_M_contig70617.16854.1 vs. uniprot
Match: UPI0019A61249 (Pirin family protein n=1 Tax=Rhodoferax sp. TaxID=50421 RepID=UPI0019A61249) HSP 1 Score: 324 bits (831), Expect = 6.970e-108 Identity = 154/259 (59.46%), Postives = 192/259 (74.13%), Query Frame = 1 Query: 1 QGLVDHADSLGATARFGEGDTQWMTAGSGVQHSEMFPLTRTDRDNPLEMFQTWLNLPASDKMVDAYFTMLWSDQTPRHTATDAAGNTAEITVIAGSLGDHQGPT----PPPNSWASKPEADVAIWHIRLAPNARWTLPRATGAETMRMLYAFEGSDVRIGDHEPIEAGTGAQLRADVDVELVAGADGIDCMLLQGRPIAEPVARYGPFVMNTEDEIQEAFADYRSTQFGGWPWPSPMPHHGVESERFAIHADGRREDVS 765 +GL+DH+DSLGATARFG GD QW+TAG G+ HSEMFPL D+ NPLE+FQ WLNLPAS KMV +FTM WS+Q P H TDA G E+ IAG+L T PPP+SWAS+P+AD+AIW +++A NARWTLP A+GA T R LY F+G+ + +G + + TG +LR D DVELV G + + ++LQGRPIAEPVA+YGPFVMNT+ EIQ+AFADY+ TQFGGWPWP P HG ++ RFA HADG+ E +S Sbjct: 87 KGLIDHSDSLGATARFGGGDVQWLTAGRGIVHSEMFPLLDRDQSNPLELFQIWLNLPASHKMVAPHFTMFWSEQVPHHHVTDANGAKTEVACIAGALHHATAGTQPLAPPPDSWASQPQADIAIWTLKMAANARWTLPAASGAGTRRSLYFFKGASLVVGG-QTVSGQTGMELRCDKDVELVNGPEFAELLVLQGRPIAEPVAQYGPFVMNTQAEIQQAFADYQRTQFGGWPWPDNAPVHGGQARRFAKHADGKNETLS 344
BLAST of mRNA_M-pyrifera_M_contig70617.16854.1 vs. uniprot
Match: A0A4Q6A102_9DELT (Pirin family protein n=5 Tax=Myxococcaceae TaxID=31 RepID=A0A4Q6A102_9DELT) HSP 1 Score: 324 bits (830), Expect = 8.120e-108 Identity = 154/251 (61.35%), Postives = 184/251 (73.31%), Query Frame = 1 Query: 4 GLVDHADSLGATARFGEGDTQWMTAGSGVQHSEMFPLTRTDRDNPLEMFQTWLNLPASDKMVDAYFTMLWSDQTPRHTATDAAGNTAEITVIAGSLGDHQGPTPPPNSWASKPEADVAIWHIRLAPNARWTLPRATGAETMRMLYAFEGSDVRIGDHEPIEAGTGAQLRADVDVELVAGADGIDCMLLQGRPIAEPVARYGPFVMNTEDEIQEAFADYRSTQFGGWPWPSPMPHHGVESERFAIHADGRRE 756 GL+DH+DSLGA ARFGEGD QW+TAGSG+ HSEMFPL R+D+ NPLE+FQ WLNLP + K V+ +F+MLW+ PRH A DAAG EITV+AG L D + P PPP SWA+ +ADVAIW ++L P A+WTLP A T RMLY F GS +++G + I +LRADVDV L GAD + +LLQGRPI EPV +YGPFVMNT EIQ+AFADY+ T FGGWPWP+P P HG E RFA HADG E Sbjct: 94 GLIDHSDSLGAAARFGEGDVQWLTAGSGINHSEMFPLLRSDKPNPLELFQIWLNLPRASKHVEPHFSMLWNQAIPRHVAKDAAGRATEITVVAGRLDDVKAPPPPPKSWAAHADADVAIWTLKLEPGAKWTLPAAVKG-TNRMLYFFRGSTLKVGGRD-IPPSRAIELRADVDVALENGADVTELLLLQGRPIGEPVVQYGPFVMNTRQEIQQAFADYQRTGFGGWPWPNPDPVHGKEEGRFARHADGHVE 342
BLAST of mRNA_M-pyrifera_M_contig70617.16854.1 vs. uniprot
Match: A0A7Y2IJ76_9ACTN (Pirin family protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2IJ76_9ACTN) HSP 1 Score: 322 bits (824), Expect = 5.420e-107 Identity = 152/253 (60.08%), Postives = 182/253 (71.94%), Query Frame = 1 Query: 4 GLVDHADSLGATARFGEGDTQWMTAGSGVQHSEMFPLTRTDRDNPLEMFQTWLNLPASDKMVDAYFTMLWSDQTPRHTATDAAGNTAEITVIAGSLGDHQGPTPPPNSWASKPEADVAIWHIRLAPNARWTLPRATGAETMRMLYAFEGSDVRIGDHEPIEAGTGAQLRADVDVELVAGADGIDCMLLQGRPIAEPVARYGPFVMNTEDEIQEAFADYRSTQFGGWPWPSPMPHHG-VESERFAIHADGRRED 759 G DH DS+GA ARFGEGDTQW+T GSGV H+E+FPL DR NPLE+FQ WLNLPA DKMV AYFTMLWS++TPR D+ G +EITVIAGS QG PPPNSWAS+ E+ + IWHI++ A LP + R++Y F+GS + I D EP+++G GA LR+ V L AG D ++ M+LQG PI EPVARYGPFVMNTE EIQ+ F DY+ TQFGGWPWP P+HG E RFA+HADG RED Sbjct: 87 GFCDHTDSMGAAARFGEGDTQWVTTGSGVVHAELFPLIHNDRPNPLELFQIWLNLPAEDKMVPAYFTMLWSEETPRSNRIDSDGRRSEITVIAGSFDGQQGQAPPPNSWASQAESSIGIWHIKMDSGATMDLPPTDSDDVNRVIYVFDGSWIEI-DGEPVKSGNGAVLRSTAAVTLRAGEDAVEVMVLQGTPIGEPVARYGPFVMNTEAEIQQTFRDYQQTQFGGWPWPEDDPNHGGPEQGRFALHADGTRED 338 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig70617.16854.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig70617.16854.1 >prot_M-pyrifera_M_contig70617.16854.1 ID=prot_M-pyrifera_M_contig70617.16854.1|Name=mRNA_M-pyrifera_M_contig70617.16854.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=256bp QGLVDHADSLGATARFGEGDTQWMTAGSGVQHSEMFPLTRTDRDNPLEMFback to top mRNA from alignment at M-pyrifera_M_contig70617:3..770+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig70617.16854.1 ID=mRNA_M-pyrifera_M_contig70617.16854.1|Name=mRNA_M-pyrifera_M_contig70617.16854.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=768bp|location=Sequence derived from alignment at M-pyrifera_M_contig70617:3..770+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig70617:3..770+ >mRNA_M-pyrifera_M_contig70617.16854.1 ID=mRNA_M-pyrifera_M_contig70617.16854.1|Name=mRNA_M-pyrifera_M_contig70617.16854.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1536bp|location=Sequence derived from alignment at M-pyrifera_M_contig70617:3..770+ (Macrocystis pyrifera P11B4 male)back to top |