mRNA_M-pyrifera_M_contig68741.16531.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig68741.16531.1 vs. uniprot
Match: I3SFB4_LOTJA (Alpha-galactosidase n=1 Tax=Lotus japonicus TaxID=34305 RepID=I3SFB4_LOTJA) HSP 1 Score: 137 bits (345), Expect = 3.080e-38 Identity = 73/137 (53.28%), Postives = 96/137 (70.07%), Query Frame = 1
Query: 1 GNGGCTTDEYTSHFSLWSLMKAPLLIGCDLTNTSPADIAILQNKEVIAINQDSLGVQGRRVWSEGTPDDIAHEVWSIPLSDKSRAAILLNRSPSTATITANLTTIGFAAGTSVSVRDLWTHTNNGTVSNTISASVPS 411
GNGG TT+EY +HFS+W+L KAPLLIGCD+ + A + +L N EVIA+NQD LGVQG++V SE D+ EVW+ PLS+ A IL NRS S AT+TA+ + IG +GTSV RDLW H+ ++S +SA + S
Sbjct: 61 GNGGMTTEEYRAHFSIWALAKAPLLIGCDIRSLDHATMELLSNSEVIAVNQDKLGVQGKKVKSES---DL--EVWAGPLSNNRLAVILWNRSSSKATVTASWSDIGLESGTSVDARDLWEHSTKSSISGEMSAELDS 192
BLAST of mRNA_M-pyrifera_M_contig68741.16531.1 vs. uniprot
Match: A0A0C9RJP7_9SPER (Alpha-galactosidase n=1 Tax=Wollemia nobilis TaxID=56998 RepID=A0A0C9RJP7_9SPER) HSP 1 Score: 139 bits (350), Expect = 2.280e-37 Identity = 71/123 (57.72%), Postives = 93/123 (75.61%), Query Frame = 1
Query: 1 GNGGCTTDEYTSHFSLWSLMKAPLLIGCDLTNTSPADIAILQNKEVIAINQDSLGVQGRRVWSEGTPDDIAHEVWSIPLSDKSRAAILLNRSPSTATITANLTTIGFAAGTSVSVRDLWTHTN 369
GNGG TT+EY +HFS+W+LMKAPLLIGCD+ + S + I+ NKEVI +NQD LGVQG+++ +G D+ EVW+ PLS+K +A IL NRS STA+ITANL +G ++ T V VRDLW H+N
Sbjct: 211 GNGGMTTEEYRAHFSIWALMKAPLLIGCDVRSASKETLEIVGNKEVINVNQDPLGVQGKKISFQG---DL--EVWAGPLSNKRKAVILWNRSSSTASITANLEDLGLSSNTLVQVRDLWAHSN 328
BLAST of mRNA_M-pyrifera_M_contig68741.16531.1 vs. uniprot
Match: A0A2R6RTC4_ACTCC (Alpha-galactosidase n=1 Tax=Actinidia chinensis var. chinensis TaxID=1590841 RepID=A0A2R6RTC4_ACTCC) HSP 1 Score: 131 bits (329), Expect = 4.850e-36 Identity = 67/121 (55.37%), Postives = 83/121 (68.60%), Query Frame = 1
Query: 1 GNGGCTTDEYTSHFSLWSLMKAPLLIGCDLTNTSPADIAILQNKEVIAINQDSLGVQGRRVWSEGTPDDIAHEVWSIPLSDKSRAAILLNRSPSTATITANLTTIGFAAGTSVSVRDLWTH 363
GNGG T EY +HFS+W+LMKAPLL+GCD+ N + IL NKEVIA+NQD LGVQGR+V+ GT D + +VW+ PL+ A +L NR ATITA T+G + SVSVRDLW H
Sbjct: 32 GNGGMTYQEYQAHFSIWALMKAPLLVGCDVRNMTAETFEILSNKEVIAVNQDPLGVQGRKVYVSGTDDCL--QVWAGPLTGHRLAVVLWNRCSKAATITAAWGTLGLESSISVSVRDLWKH 150
BLAST of mRNA_M-pyrifera_M_contig68741.16531.1 vs. uniprot
Match: UPI0011D22AEF (alpha-galactosidase-like n=1 Tax=Syzygium oleosum TaxID=219896 RepID=UPI0011D22AEF) HSP 1 Score: 137 bits (344), Expect = 5.270e-36 Identity = 71/137 (51.82%), Postives = 93/137 (67.88%), Query Frame = 1
Query: 1 GNGGCTTDEYTSHFSLWSLMKAPLLIGCDLTNTSPADIAILQNKEVIAINQDSLGVQGRRVWSEGTPDDIAHEVWSIPLSDKSRAAILLNRSPSTATITANLTTIGFAAGTSVSVRDLWTHTNNGTVSNTISASVPS 411
GNGG TT+EY SHFS+W+L+KAPLLIGCDL + + +L NKEVIA+NQD LGVQG++V S+G +VW+ PLS A +L NR STAT+TA+ + IG + T V RDLW HT +++ ISA + S
Sbjct: 274 GNGGMTTEEYRSHFSIWALVKAPLLIGCDLRSMDSTTLELLSNKEVIAVNQDRLGVQGKKVKSDGNL-----QVWAGPLSANKVAVVLWNRGSSTATVTASWSDIGLKSTTVVDARDLWMHTTQSSINGQISADIDS 405
BLAST of mRNA_M-pyrifera_M_contig68741.16531.1 vs. uniprot
Match: S8C309_9LAMI (Alpha-galactosidase (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8C309_9LAMI) HSP 1 Score: 135 bits (341), Expect = 6.920e-36 Identity = 67/121 (55.37%), Postives = 88/121 (72.73%), Query Frame = 1
Query: 1 GNGGCTTDEYTSHFSLWSLMKAPLLIGCDLTNTSPADIAILQNKEVIAINQDSLGVQGRRVWSEGTPDDIAHEVWSIPLSDKSRAAILLNRSPSTATITANLTTIGFAAGTSVSVRDLWTH 363
GNGG + DEY +HFSLW+LMK+PLLIGCD+ N SP IL N+EVIA+NQDSLGVQGR+V+ G D +++VW+ P+S + A +L NRS TATIT + +G + +VS+RDLW H
Sbjct: 230 GNGGMSYDEYRAHFSLWALMKSPLLIGCDVRNMSPETFEILSNEEVIAVNQDSLGVQGRKVYLYGPGD--SYQVWAGPISGQRLAVLLWNRSAKTATITVQWSHLGLESSAAVSIRDLWKH 348
BLAST of mRNA_M-pyrifera_M_contig68741.16531.1 vs. uniprot
Match: B9S4D3_RICCO (Alpha-galactosidase n=1 Tax=Ricinus communis TaxID=3988 RepID=B9S4D3_RICCO) HSP 1 Score: 134 bits (338), Expect = 1.470e-35 Identity = 70/121 (57.85%), Postives = 84/121 (69.42%), Query Frame = 1
Query: 1 GNGGCTTDEYTSHFSLWSLMKAPLLIGCDLTNTSPADIAILQNKEVIAINQDSLGVQGRRVWSEGTPDDIAHEVWSIPLSDKSRAAILLNRSPSTATITANLTTIGFAAGTSVSVRDLWTH 363
GNGG T EY +HFS+W+LMKAPLLIGCD+ N + IL NKEVIA+NQDSLGVQGR+V + GT D +VW+ PLS A +L NR ATITA +G +GTSV+VRDLW H
Sbjct: 207 GNGGMTYQEYRAHFSIWALMKAPLLIGCDVRNMTAETYEILTNKEVIAVNQDSLGVQGRKVQASGT--DGCLQVWAGPLSGHRMAVVLWNRCSKAATITARWDALGLESGTSVAVRDLWQH 325
BLAST of mRNA_M-pyrifera_M_contig68741.16531.1 vs. uniprot
Match: A0A804IXT3_MUSAM (Alpha-galactosidase n=1 Tax=Musa acuminata subsp. malaccensis TaxID=214687 RepID=A0A804IXT3_MUSAM) HSP 1 Score: 135 bits (340), Expect = 1.710e-35 Identity = 73/138 (52.90%), Postives = 95/138 (68.84%), Query Frame = 1
Query: 1 GNGGCTTDEYTSHFSLWSLMKAPLLIGCDLTNTSPADIAILQNKEVIAINQDSLGVQGRRV-WSEGTPDDIAHEVWSIPLSDKSRAAILLNRSPSTATITANLTTIGFAAGTSVSVRDLWTHTNNGTVSNTISASVPS 411
GNGG TT+EY SHFS+W+L KAPLLIGCD+ + S + IL N EVIA+NQDSLGVQG++V W GT EVW+ PLS + A +L NR S ATITA + IG ++ T V+ RDLW H++ +V ++A+V S
Sbjct: 264 GNGGMTTEEYRSHFSIWALAKAPLLIGCDVRSISEDALEILSNSEVIAVNQDSLGVQGKKVVWGGGT------EVWAGPLSGGTVAVVLWNRGSSPATITAEWSDIGLSSSTVVNARDLWAHSDTASVQGELTATVDS 395
BLAST of mRNA_M-pyrifera_M_contig68741.16531.1 vs. uniprot
Match: UPI0010368F67 (alpha-galactosidase 3-like n=1 Tax=Camellia sinensis TaxID=4442 RepID=UPI0010368F67) HSP 1 Score: 130 bits (328), Expect = 1.850e-35 Identity = 69/121 (57.02%), Postives = 83/121 (68.60%), Query Frame = 1
Query: 1 GNGGCTTDEYTSHFSLWSLMKAPLLIGCDLTNTSPADIAILQNKEVIAINQDSLGVQGRRVWSEGTPDDIAHEVWSIPLSDKSRAAILLNRSPSTATITANLTTIGFAAGTSVSVRDLWTH 363
GNGG T EY +HFS+W+LMKAPLLIGCD+ N + +L NKEVIA+NQD LGVQGR+V GT D +VW+ PL+ +S A L NR ATITA T+G + TSVSVRDLW H
Sbjct: 68 GNGGMTYLEYRAHFSIWALMKAPLLIGCDVRNMTAETFELLSNKEVIAVNQDPLGVQGRKVHVAGTND--CRQVWAGPLTGQSLAVALWNRCSKAATITAAWGTLGLESSTSVSVRDLWKH 186
BLAST of mRNA_M-pyrifera_M_contig68741.16531.1 vs. uniprot
Match: A0A3N7G7W0_POPTR (Alpha-galactosidase n=1 Tax=Populus trichocarpa TaxID=3694 RepID=A0A3N7G7W0_POPTR) HSP 1 Score: 133 bits (335), Expect = 1.880e-35 Identity = 73/137 (53.28%), Postives = 93/137 (67.88%), Query Frame = 1
Query: 1 GNGGCTTDEYTSHFSLWSLMKAPLLIGCDLTNTSPADIAILQNKEVIAINQDSLGVQGRRVWSEGTPDDIAHEVWSIPLSDKSRAAILLNRSPSTATITANLTTIGFAAGTSVSVRDLWTHTNNGTVSNTISASVPS 411
GNGG TT+EY SHFS+W+L KAPLLIGCD+ S I IL N+EVIA+NQD LGVQG++V + G D+ EVW+ PLS+ A +L NR S AT+TA + IG T+V+ RDLW H+N +V ISA + S
Sbjct: 180 GNGGMTTEEYRSHFSIWALAKAPLLIGCDVRTMSDETIEILSNREVIAVNQDKLGVQGKKVKNNG---DL--EVWAGPLSNNKIAVVLWNRGSSRATVTAYWSDIGLDPTTTVNARDLWAHSNQPSVKGQISADLDS 311
BLAST of mRNA_M-pyrifera_M_contig68741.16531.1 vs. uniprot
Match: A0A830BM62_9LAMI (Alpha-galactosidase n=1 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830BM62_9LAMI) HSP 1 Score: 135 bits (339), Expect = 2.970e-35 Identity = 67/121 (55.37%), Postives = 89/121 (73.55%), Query Frame = 1
Query: 1 GNGGCTTDEYTSHFSLWSLMKAPLLIGCDLTNTSPADIAILQNKEVIAINQDSLGVQGRRVWSEGTPDDIAHEVWSIPLSDKSRAAILLNRSPSTATITANLTTIGFAAGTSVSVRDLWTH 363
GNGG T++EY +HFS+W+LMKAPLLIGCD+ N + + IL N+EVIA+NQD LGVQGR+V++ G PD ++VW+ PLS++ A +L NR T TITA + +G + SVSVRDLW H
Sbjct: 266 GNGGMTSEEYRAHFSIWALMKAPLLIGCDVRNITAETLEILSNEEVIAVNQDPLGVQGRKVYASG-PDG-CYQVWAGPLSEQRLAVVLWNRCSKTGTITAKWSVLGLESSISVSVRDLWKH 384 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig68741.16531.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig68741.16531.1 >prot_M-pyrifera_M_contig68741.16531.1 ID=prot_M-pyrifera_M_contig68741.16531.1|Name=mRNA_M-pyrifera_M_contig68741.16531.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=137bp GNGGCTTDEYTSHFSLWSLMKAPLLIGCDLTNTSPADIAILQNKEVIAINback to top mRNA from alignment at M-pyrifera_M_contig68741:3..986- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig68741.16531.1 ID=mRNA_M-pyrifera_M_contig68741.16531.1|Name=mRNA_M-pyrifera_M_contig68741.16531.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=984bp|location=Sequence derived from alignment at M-pyrifera_M_contig68741:3..986- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig68741:3..986- >mRNA_M-pyrifera_M_contig68741.16531.1 ID=mRNA_M-pyrifera_M_contig68741.16531.1|Name=mRNA_M-pyrifera_M_contig68741.16531.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=822bp|location=Sequence derived from alignment at M-pyrifera_M_contig68741:3..986- (Macrocystis pyrifera P11B4 male)back to top |