mRNA_M-pyrifera_M_contig6874.16528.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig6874.16528.1 vs. uniprot
Match: A0A6H5KS37_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KS37_9PHAE) HSP 1 Score: 378 bits (970), Expect = 7.090e-126 Identity = 191/229 (83.41%), Postives = 208/229 (90.83%), Query Frame = 1
Query: 1 QNTKTRMAEMFPMKSATFLLDFASCSAATALCSIMSTPQMVLTNRIMAGVYPNLVTGVRSVIKDKGVLGFYAGWWPGLVQKIPSYGLTWVLFQQVKDLHYKLVNRLPSNTENFWLGCMAAAGSVTIMIPMDTIKTRLVTQSSISTVKYKGILNCFSRMLREEGLGSFYNSLTPRLVSVVPMIGVQYLVYEFMKRLMAEVPEPVAESTEDL-ILARTKV-VEELETVTEG 681
+NTK+RMAEMFP+KSA+FLLDFASCS ATALCS+MSTPQMVLTNRIMAGVYPNL TGVRS+I++KG LGFYAGWWPGLVQKIPSYGLTWVLFQQVKDLHY++ RLPSN ENFWLGC+AAAGSVTIMIPMDT+KTRLVTQSS STV Y GI NCF+RMLREEGL SFYNSL+PRLVSVVPMIGVQYLVYEFMKRLMAEVPE A + +L+RT V VEELETVTEG
Sbjct: 231 ENTKSRMAEMFPLKSASFLLDFASCSVATALCSVMSTPQMVLTNRIMAGVYPNLWTGVRSIIQEKGALGFYAGWWPGLVQKIPSYGLTWVLFQQVKDLHYRMAKRLPSNAENFWLGCIAAAGSVTIMIPMDTVKTRLVTQSSASTVMYSGIFNCFTRMLREEGLTSFYNSLSPRLVSVVPMIGVQYLVYEFMKRLMAEVPEAAAPMPKKKNVLSRTTVLVEELETVTEG 459
BLAST of mRNA_M-pyrifera_M_contig6874.16528.1 vs. uniprot
Match: A0A4D9D1K6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D1K6_9STRA) HSP 1 Score: 228 bits (580), Expect = 3.500e-69 Identity = 114/201 (56.72%), Postives = 151/201 (75.12%), Query Frame = 1
Query: 7 TKTRMAEMFPMKSATFLLDFASCSAATALCSIMSTPQMVLTNRIMAGVYPNLVTGVRSVIKDKGVLGFYAGWWPGLVQKIPSYGLTWVLFQQVKDLHYKLVNRLPSNTENFWLGCMAAAGSVTIMIPMDTIKTRLVTQSS--ISTVKYKGILNCFSRMLREEGLGSFYNSLTPRLVSVVPMIGVQYLVYEFMKRLMAEVPE 603
TK+ ++ FP+ A DF S + +T +CS++STPQMVLT+RIMAG YPNL GVR+V+K GV G YAGW+ L QKIPSYGLTWV FQQ+K + ++ +N ENF +G +AAA +V +MIP+DT+KTR+VTQ++ + V YKG+ +CFSR+L+EEGL +FY L PRLVSVVPMIG+Q+ VYEFMKR +A +PE
Sbjct: 52 TKSTLSSWFPVNFAGPAFDFVSSAVSTTICSVISTPQMVLTDRIMAGYYPNLAHGVRTVLKTDGVQGLYAGWFAALAQKIPSYGLTWVFFQQLKIARNRWMDHEATNGENFGMGALAAAATVCVMIPLDTVKTRIVTQAANPAAGVHYKGVWDCFSRVLKEEGLKTFYAPLAPRLVSVVPMIGIQFGVYEFMKRTIAGMPE 252
BLAST of mRNA_M-pyrifera_M_contig6874.16528.1 vs. uniprot
Match: A0A835ZCC4_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCC4_9STRA) HSP 1 Score: 229 bits (583), Expect = 2.770e-68 Identity = 108/165 (65.45%), Postives = 134/165 (81.21%), Query Frame = 1
Query: 100 IMSTPQMVLTNRIMAGVYPNLVTGVRSVIKDKGVLGFYAGWWPGLVQKIPSYGLTWVLFQQVKDLHYKLVNRLPSNTENFWLGCMAAAGSVTIMIPMDTIKTRLVTQSSISTVKYKGILNCFSRMLREEGLGSFYNSLTPRLVSVVPMIGVQYLVYEFMKRLMAE 594
++STP MVLT+RIMAG YPNL++G+ S+ K+ G+ GFYAGW PGLVQKIPSYGLTWV FQQ KDLH++ PS+ ENFWLG +AAAGSVT+MIPMDT+KTRLVTQ++ S Y+GI++CF + R EG+G+FYNSLTPRL SVVPMIG+QY + + R MAE
Sbjct: 206 VLSTPTMVLTSRIMAGSYPNLLSGIGSICKESGLRGFYAGWLPGLVQKIPSYGLTWVFFQQAKDLHFRFFKHEPSDGENFWLGAIAAAGSVTVMIPMDTVKTRLVTQTAGSARHYRGIIDCFRTIARTEGVGAFYNSLTPRLASVVPMIGIQYGILCLLTRKMAE 370
BLAST of mRNA_M-pyrifera_M_contig6874.16528.1 vs. uniprot
Match: D7FP70_ECTSI (Mitochondrial energy transfer protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP70_ECTSI) HSP 1 Score: 225 bits (573), Expect = 5.640e-68 Identity = 110/177 (62.15%), Postives = 138/177 (77.97%), Query Frame = 1
Query: 55 LLDFASCSAATALCSIMSTPQMVLTNRIMAGVYPNLVTGVRSVIKDKGVLGFYAGWWPGLVQKIPSYGLTWVLFQQVKDLHYKLVNRLPSNTENFWLGCMAAAGSVTIMIPMDTIKTRLVTQSS-ISTVKYKGILNCFSRMLREEGLGSFYNSLTPRLVSVVPMIGVQYLVYEFMKR 582
+LDF S S AT +CS++STPQMVLT+RIMAG+YPNL +GVR + + +G+ GFY GW + QKIPSYGLTWV FQQ K LH K +R P+NTENF LG AA +V IMIPMDT+KTRLVTQ++ V YKG+L +R++REEGLG Y SLTPRLVSVVPMIG+Q+ +YEF+++
Sbjct: 86 VLDFLSSSVATVVCSVVSTPQMVLTDRIMAGIYPNLASGVREITRTQGLPGFYVGWSANVAQKIPSYGLTWVFFQQFKRLHRKATDRPPTNTENFVLGAAAAGATVCIMIPMDTVKTRLVTQTAQAGVVPYKGVLQTLTRIVREEGLGPIYRSLTPRLVSVVPMIGIQFGIYEFVRK 262
BLAST of mRNA_M-pyrifera_M_contig6874.16528.1 vs. uniprot
Match: W7THW6_9STRA (S-adenosylmethionine mitochondrial carrier protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7THW6_9STRA) HSP 1 Score: 229 bits (584), Expect = 5.010e-67 Identity = 115/201 (57.21%), Postives = 152/201 (75.62%), Query Frame = 1
Query: 7 TKTRMAEMFPMKSATFLLDFASCSAATALCSIMSTPQMVLTNRIMAGVYPNLVTGVRSVIKDKGVLGFYAGWWPGLVQKIPSYGLTWVLFQQVKDLHYKLVNRLPSNTENFWLGCMAAAGSVTIMIPMDTIKTRLVTQSS--ISTVKYKGILNCFSRMLREEGLGSFYNSLTPRLVSVVPMIGVQYLVYEFMKRLMAEVPE 603
TK+ ++ FP+ A DF S + +T +CS++STPQMVLT+RIMAG YPNLV GVR+V+K GV G YAGW+ L QKIPSYGLTWV FQQ+K + ++ +N ENF +G +AAA +V +MIP+DT+KTR+VTQ++ + V YKG+ +CFSR+L+EEGL +FY L PRLVSVVPMIG+Q+ VYEFMKR +A +PE
Sbjct: 291 TKSTLSSWFPVNFAGPAFDFVSSAVSTTICSVISTPQMVLTDRIMAGYYPNLVHGVRTVLKTDGVQGLYAGWFAALAQKIPSYGLTWVFFQQLKIARNRWMDHEATNGENFGMGALAAAATVCVMIPLDTVKTRIVTQAANPAAGVHYKGVWDCFSRVLKEEGLKTFYAPLAPRLVSVVPMIGIQFGVYEFMKRTIAGMPE 491
BLAST of mRNA_M-pyrifera_M_contig6874.16528.1 vs. uniprot
Match: A0A6H5JLA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLA3_9PHAE) HSP 1 Score: 225 bits (573), Expect = 2.890e-64 Identity = 110/177 (62.15%), Postives = 138/177 (77.97%), Query Frame = 1
Query: 55 LLDFASCSAATALCSIMSTPQMVLTNRIMAGVYPNLVTGVRSVIKDKGVLGFYAGWWPGLVQKIPSYGLTWVLFQQVKDLHYKLVNRLPSNTENFWLGCMAAAGSVTIMIPMDTIKTRLVTQSS-ISTVKYKGILNCFSRMLREEGLGSFYNSLTPRLVSVVPMIGVQYLVYEFMKR 582
+LDF S S AT +CS++STPQMVLT+RIMAG+YPNL +GVR + + +G+ GFY GW + QKIPSYGLTWV FQQ K LH K +R P+NTENF LG AA +V IMIPMDT+KTRLVTQ++ V YKG+L +R++REEGLG Y SLTPRLVSVVPMIG+Q+ +YEF+++
Sbjct: 447 VLDFLSSSVATVVCSVVSTPQMVLTDRIMAGIYPNLASGVREITRTQGLPGFYVGWSANVAQKIPSYGLTWVFFQQFKRLHRKATDRPPTNTENFVLGAAAAGATVCIMIPMDTVKTRLVTQTAQAGVVPYKGVLQTLTRIVREEGLGPIYRSLTPRLVSVVPMIGIQFGIYEFVRK 623
BLAST of mRNA_M-pyrifera_M_contig6874.16528.1 vs. uniprot
Match: A0A0G4H4F1_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4H4F1_VITBC) HSP 1 Score: 219 bits (557), Expect = 3.560e-64 Identity = 105/197 (53.30%), Postives = 153/197 (77.66%), Query Frame = 1
Query: 10 KTRMAEMFPMKSATFLLDFASCSAATALCSIMSTPQMVLTNRIMAGVYPNLVTGVRSVIKDKGVLGFYAGWWPGLVQKIPSYGLTWVLFQQVKDLHYKLVNRLPSNTENFWLGCMAAAGSVTIMIPMDTIKTRLVTQSSISTVK-YKGILNCFSRMLREEGLGSFYNSLTPRLVSVVPMIGVQYLVYEFMK-RLMAE 594
K +M + P+K A F+ DF S ++AT LCS++STPQMVL +RI+ G+YPNLV+G+ +++ +GV G Y GW+PG++QKIPSY LTWV +QQ+++LH + R PS+ ENF +G AA V IMIP+DT+KTRLVTQ+++ V+ YKGI++CF R+++EEG+G Y +L RL+SVVPMIG+Q+ VYE++K RL+++
Sbjct: 189 KHQMTRLMPIKQAGFVFDFCSQASATFLCSVISTPQMVLVDRIVTGIYPNLVSGLSKLLRTEGVRGLYTGWFPGMIQKIPSYSLTWVAYQQLRNLHSVIFPRDPSDAENFLIGATAAGIVVAIMIPVDTVKTRLVTQATLGAVQPYKGIIDCFLRVIKEEGVGRLYRALPMRLMSVVPMIGIQFGVYEYVKSRLLSD 385
BLAST of mRNA_M-pyrifera_M_contig6874.16528.1 vs. uniprot
Match: A0A7S3QJC6_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QJC6_9STRA) HSP 1 Score: 218 bits (556), Expect = 7.310e-64 Identity = 114/221 (51.58%), Postives = 150/221 (67.87%), Query Frame = 1
Query: 55 LLDFASCSAATALCSIMSTPQMVLTNRIMAGVYPNLVTGVRSVIKDKGVLGFYAGWWPGLVQKIPSYGLTWVLFQQVKDLHYKLVNRLPSNTENFWLGCMAAAGSVTIMIPMDTIKTRLVTQSSI-STVKYKGILNCFSRMLREEGLGSFYNSLTPRLVSVVPMIGVQYLVYEFMKRLMAEVPEPVAESTEDLILARTKVVEELETVTEG*TRYFPSPTRV 714
LLDF S + AT CS++STPQM++ + IMAG Y N + + KDKG+LGFY GWWPGLV KIPSY LTW LFQQ+K +++ R P + EN +GCMA+A SVT+MIPMDTIKTRLVTQ + V YKGI++ +R+ +EEG+ +FY L PRL+SVVPMIG+Q+ VYEFMK+ M + P S E +++ K+ E + V + FP P V
Sbjct: 226 LLDFCSSAIATVCCSVISTPQMMIVDNIMAGTYENFPKAIMGLSKDKGILGFYGGWWPGLVGKIPSYALTWTLFQQLKQAQLRIMQRPPKDIENSMMGCMASAISVTVMIPMDTIKTRLVTQLNYPDLVPYKGIIDAANRIAKEEGIKTFYRGLPPRLLSVVPMIGIQFGVYEFMKKTMID-RRP---SREMILMESNKLEEVMMEVAADDDQPFPVPHMV 442
BLAST of mRNA_M-pyrifera_M_contig6874.16528.1 vs. uniprot
Match: A0A835Z5P9_9STRA (Mitochondrial energy transfer protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5P9_9STRA) HSP 1 Score: 211 bits (538), Expect = 5.640e-63 Identity = 102/177 (57.63%), Postives = 135/177 (76.27%), Query Frame = 1
Query: 55 LLDFASCSAATALCSIMSTPQMVLTNRIMAGVYPNLVTGVRSVIKDKGVLGFYAGWWPGLVQKIPSYGLTWVLFQQVKDLHYKLVNRLPSNTENFWLGCMAAAGSVTIMIPMDTIKTRLVTQ-SSISTVKYKGILNCFSRMLREEGLGSFYNSLTPRLVSVVPMIGVQYLVYEFMKR 582
+LDF S + AT +CSI+STPQMV+T+RIMA +YPNL + VR++ + +G+ GFYAGW P L QKIPSYGLTWV FQQ K H ++V R P+N ENF LG AA +V I+IP+DT KTR+VTQ ++ V Y G++ C R++REEG+G+ Y +L PRL SVVPMIG+Q+ VYE++KR
Sbjct: 84 VLDFFSSTVATTICSIISTPQMVITDRIMADIYPNLASAVRTISQTEGLKGFYAGWGPNLAQKIPSYGLTWVFFQQFKLAHQRVVRREPTNGENFALGAAAAGATVCILIPLDTAKTRIVTQVATPGLVPYTGVVECIQRVIREEGIGTLYKALGPRLASVVPMIGIQFGVYEYLKR 260
BLAST of mRNA_M-pyrifera_M_contig6874.16528.1 vs. uniprot
Match: A0A6V1QN06_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QN06_HETAK) HSP 1 Score: 214 bits (544), Expect = 1.020e-62 Identity = 106/187 (56.68%), Postives = 138/187 (73.80%), Query Frame = 1
Query: 19 MAEMFPMKSATFLLDFASCSAATALCSIMSTPQMVLTNRIMAGVYPNLVTGVRSVIKDKGVLGFYAGWWPGLVQKIPSYGLTWVLFQQVKDLHYKLVNRLPSNTENFWLGCMAAAGSVTIMIPMDTIKTRLVTQSSISTVKYKGILNCFSRMLREEGLGSFYNSLTPRLVSVVPMIGVQYLVYEFMK 579
M + P K A F LDF S +A+T LCSI+STPQMVL +R MAG+YP+L GVR V++ +G GFY+GW P +V+KIPSYGLTW+ F+Q+++ ++V R P N +NF +G +AA GSVT+M+PMD +KTRLVTQ S Y GI +CF R+ EEGL +FY L PRLVSVVPMIG+Q+ +YE MK
Sbjct: 154 MDKHVPYKRAGFALDFLSSAASTLLCSIVSTPQMVLHDRCMAGIYPSLGAGVREVLRTQGPAGFYSGWVPSIVEKIPSYGLTWMFFKQLQEAWTRVVGRRPDNRDNFLIGALAAGGSVTVMMPMDIVKTRLVTQIKGSPGAYAGIADCFRRVAAEEGLRTFYAGLRPRLVSVVPMIGLQFGIYEVMK 340 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig6874.16528.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig6874.16528.1 >prot_M-pyrifera_M_contig6874.16528.1 ID=prot_M-pyrifera_M_contig6874.16528.1|Name=mRNA_M-pyrifera_M_contig6874.16528.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=222bp MAEMFPMKSATFLLDFASCSAATALCSIMSTPQMVLTNRIMAGVYPNLVTback to top mRNA from alignment at M-pyrifera_M_contig6874:449..3733+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig6874.16528.1 ID=mRNA_M-pyrifera_M_contig6874.16528.1|Name=mRNA_M-pyrifera_M_contig6874.16528.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3285bp|location=Sequence derived from alignment at M-pyrifera_M_contig6874:449..3733+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig6874:449..3733+ >mRNA_M-pyrifera_M_contig6874.16528.1 ID=mRNA_M-pyrifera_M_contig6874.16528.1|Name=mRNA_M-pyrifera_M_contig6874.16528.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1332bp|location=Sequence derived from alignment at M-pyrifera_M_contig6874:449..3733+ (Macrocystis pyrifera P11B4 male)back to top |